mm10_v2_chr16_-_45724600_45724619	0.378651	Hoxa3	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr14_+_64589802_64589848	0.327414	Hoxa3	ENSMUST00000180610.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr2_+_173153048_173153080	0.247009	Hoxa3	ENSMUST00000029017.5|Pck1|ENSMUSG00000027513.5|phosphoenolpyruvate carboxykinase 1, cytosolic
mm10_v2_chr3_-_72967854_72967869	0.149412	Hoxa3	ENSMUST00000167334.1|Sis|ENSMUSG00000027790.8|sucrase isomaltase (alpha-glucosidase)
mm10_v2_chr19_-_55241236_55241236	0.148055	Hoxa3	ENSMUST00000069183.6|Gucy2g|ENSMUSG00000055523.6|guanylate cyclase 2g
mm10_v2_chr3_-_86548268_86548290	0.141473	Hoxa3	ENSMUST00000077524.3|Mab21l2|ENSMUSG00000057777.3|mab-21-like 2 (C. elegans)
mm10_v2_chr6_+_8948608_8948619	0.135364	Hoxa3	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr2_-_17460610_17460635	0.123768	Hoxa3	ENSMUST00000145492.1|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr5_+_104202609_104202624	0.118679	Hoxa3	ENSMUST00000066708.5|Dmp1|ENSMUSG00000029307.6|dentin matrix protein 1
mm10_v2_chr12_+_71170589_71170589	0.10916	Hoxa3	ENSMUST00000129376.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr6_+_63255971_63256036	0.107554	Hoxa3	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr17_-_70853482_70853546	0.0966171	Hoxa3	ENSMUST00000118283.1|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr7_-_45103747_45103822	0.0910414	Hoxa3	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr4_+_108719649_108719649	0.0855259	Hoxa3	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr7_-_38019505_38019552	0.0821952	Hoxa3	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr10_+_40349265_40349387	0.0772487	Hoxa3	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr6_-_136781718_136781806	0.0733523	Hoxa3	ENSMUST00000078095.6|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c 	ENSMUST00000032338.7|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c
mm10_v2_chr2_-_164171113_164171113	0.0682668	Hoxa3	ENSMUST00000045196.3|Kcns1|ENSMUSG00000040164.3|K+ voltage-gated channel, subfamily S, 1
mm10_v2_chr2_+_116067213_116067250	0.067368	Hoxa3	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr12_+_59013379_59013398	0.0644766	Hoxa3	ENSMUST00000021379.7|Gemin2|ENSMUSG00000060121.9|gem (nuclear organelle) associated protein 2
mm10_v2_chr16_-_92400067_92400083	0.062137	Hoxa3	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr10_+_37139558_37139558	0.0528499	Hoxa3	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr5_+_138187485_138187521	0.0504668	Hoxa3	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr11_-_100762928_100762936	0.0421964	Hoxa3	ENSMUST00000107360.2|Hcrt|ENSMUSG00000045471.4|hypocretin 	ENSMUST00000055083.3|Hcrt|ENSMUSG00000045471.4|hypocretin
mm10_v2_chrX_+_16619698_16619758	0.0400709	Hoxa3	ENSMUST00000026013.5|Maoa|ENSMUSG00000025037.6|monoamine oxidase A
mm10_v2_chr10_-_37138863_37138937	0.0395427	Hoxa3	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr1_-_172027269_172027313	0.03408	Hoxa3	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr2_+_36230426_36230491	0.028466	Hoxa3	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr1_-_172027251_172027268	0.0280646	Hoxa3	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr3_+_55782500_55782521	0.026038	Hoxa3	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr9_+_119063429_119063467	0.0251055	Hoxa3	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr13_-_85127514_85127514	0.0142489	Hoxa3	ENSMUST00000179230.1|Gm4076|ENSMUSG00000096449.1|predicted gene 4076
mm10_v2_chr1_-_144545320_144545320	0.0128654	Hoxa3	ENSMUST00000184189.1|Rgs21|ENSMUSG00000098509.1|regulator of G-protein signalling 21
mm10_v2_chr5_-_138187177_138187237	0.0120331	Hoxa3	ENSMUST00000110937.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000139276.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000048698.7|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000123415.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr15_-_34356421_34356421	0.00399788	Hoxa3	ENSMUST00000179647.1|9430069I07Rik|ENSMUSG00000094447.1|RIKEN cDNA 9430069I07 gene
mm10_v2_chr9_-_55919605_55919605	0.00372426	Hoxa3	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
