mm10_v2_chr6_+_71199827_71199888	3.89602	Hoxd11_Cdx1_Hoxc11	ENSMUST00000067492.7|Fabp1|ENSMUSG00000054422.7|fatty acid binding protein 1, liver
mm10_v2_chr4_+_11758147_11758220	0.858708	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr11_-_100146120_100146120	0.786348	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007317.7|Krt19|ENSMUSG00000020911.8|keratin 19
mm10_v2_chr3_-_72967854_72967869	0.711553	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167334.1|Sis|ENSMUSG00000027790.8|sucrase isomaltase (alpha-glucosidase)
mm10_v2_chr6_-_24168083_24168097	0.620725	Hoxd11_Cdx1_Hoxc11	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chr17_-_36190121_36190287	0.614185	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097329.3|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3 	ENSMUST00000025312.6|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3 	ENSMUST00000102675.3|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3
mm10_v2_chr15_-_78855517_78855536	0.608585	Hoxd11_Cdx1_Hoxc11	ENSMUST00000044584.4|Lgals2|ENSMUSG00000043501.4|lectin, galactose-binding, soluble 2
mm10_v2_chr17_+_5799491_5799614	0.604325	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181484.1|3300005D01Rik|ENSMUSG00000096965.1|RIKEN cDNA 3300005D01 gene
mm10_v2_chr7_+_43690418_43690418	0.576464	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056329.6|Klk14|ENSMUSG00000044737.6|kallikrein related-peptidase 14
mm10_v2_chr7_-_135528645_135528661	0.574505	Hoxd11_Cdx1_Hoxc11	ENSMUST00000053716.7|Clrn3|ENSMUSG00000050866.7|clarin 3
mm10_v2_chr5_-_62765618_62765656	0.484207	Hoxd11_Cdx1_Hoxc11	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr17_-_31144271_31144288	0.422586	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024826.7|Tff2|ENSMUSG00000024028.7|trefoil factor 2 (spasmolytic protein 1)
mm10_v2_chr7_+_123462274_123462296	0.392416	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033023.3|Aqp8|ENSMUSG00000030762.5|aquaporin 8
mm10_v2_chr8_+_69902178_69902194	0.38204	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050373.5|Tssk6|ENSMUSG00000047654.5|testis-specific serine kinase 6
mm10_v2_chr3_+_138313279_138313293	0.367264	Hoxd11_Cdx1_Hoxc11	ENSMUST00000013455.6|Adh6a|ENSMUSG00000053054.7|alcohol dehydrogenase 6A (class V) 	ENSMUST00000106247.1|Adh6a|ENSMUSG00000053054.7|alcohol dehydrogenase 6A (class V)
mm10_v2_chr4_+_144893127_144893151	0.350523	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr14_-_37110087_37110106	0.331054	Hoxd11_Cdx1_Hoxc11	ENSMUST00000179488.1|2610528A11Rik|ENSMUSG00000096001.1|RIKEN cDNA 2610528A11 gene
mm10_v2_chr18_+_33464163_33464163	0.328123	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097634.3|Gm10549|ENSMUSG00000073610.3|predicted gene 10549
mm10_v2_chr16_-_56795823_56795899	0.319124	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023437.4|Gpr128|ENSMUSG00000022755.4|G protein-coupled receptor 128
mm10_v2_chr18_+_21072329_21072351	0.281661	Hoxd11_Cdx1_Hoxc11	ENSMUST00000082235.4|Mep1b|ENSMUSG00000024313.7|meprin 1 beta
mm10_v2_chr3_+_138415484_138415510	0.278274	Hoxd11_Cdx1_Hoxc11	ENSMUST00000161312.1|Adh4|ENSMUSG00000037797.8|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENSMUST00000013458.8|Adh4|ENSMUSG00000037797.8|alcohol dehydrogenase 4 (class II), pi polypeptide
mm10_v2_chr3_-_144932523_144932536	0.2781	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098549.3|AI747448|ENSMUSG00000074195.3|expressed sequence AI747448
mm10_v2_chr13_+_23581563_23581598	0.267612	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102968.1|Hist1h4d|ENSMUSG00000061482.6|histone cluster 1, H4d
mm10_v2_chr8_-_25038875_25038962	0.257183	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084031.4|Htra4|ENSMUSG00000037406.6|HtrA serine peptidase 4
mm10_v2_chr7_-_19677941_19677952	0.216318	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142352.1|Apoc2|ENSMUSG00000002992.10|apolipoprotein C-II
mm10_v2_chrX_+_164140447_164140495	0.200333	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073973.4|Ace2|ENSMUSG00000015405.9|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm10_v2_chr6_+_40628824_40628839	0.193071	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071535.6|Mgam|ENSMUSG00000068587.6|maltase-glucoamylase
mm10_v2_chr4_+_144892813_144892835	0.190093	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr5_-_73191848_73191922	0.186769	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176910.1|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr1_-_144177259_144177372	0.183157	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr11_+_96316684_96316684	0.181769	Hoxd11_Cdx1_Hoxc11	ENSMUST00000049241.7|Hoxb4|ENSMUSG00000038692.7|homeobox B4
mm10_v2_chr17_-_35074485_35074500	0.155502	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007259.3|Ly6g6d|ENSMUSG00000073413.3|lymphocyte antigen 6 complex, locus G6D
mm10_v2_chr6_+_15196949_15197102	0.153923	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr17_-_31129602_31129646	0.148388	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024827.4|Tff3|ENSMUSG00000024029.4|trefoil factor 3, intestinal
mm10_v2_chrX_+_150547375_150547459	0.147912	Hoxd11_Cdx1_Hoxc11	ENSMUST00000066337.6|Alas2|ENSMUSG00000025270.7|aminolevulinic acid synthase 2, erythroid 	ENSMUST00000112715.1|Alas2|ENSMUSG00000025270.7|aminolevulinic acid synthase 2, erythroid
mm10_v2_chr4_+_33081505_33081505	0.146326	Hoxd11_Cdx1_Hoxc11	ENSMUST00000147889.1|Gabrr2|ENSMUSG00000023267.4|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm10_v2_chr1_-_128328311_128328326	0.143693	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073490.6|Lct|ENSMUSG00000026354.8|lactase
mm10_v2_chr2_+_163506808_163506860	0.142423	Hoxd11_Cdx1_Hoxc11	ENSMUST00000143911.1|Hnf4a|ENSMUSG00000017950.10|hepatic nuclear factor 4, alpha
mm10_v2_chr7_-_134232005_134232054	0.140061	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr4_-_64046925_64047015	0.138303	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chr2_+_122298898_122298903	0.138139	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028656.1|Duoxa2|ENSMUSG00000027225.7|dual oxidase maturation factor 2
mm10_v2_chr3_+_62419668_62419668	0.135896	Hoxd11_Cdx1_Hoxc11	ENSMUST00000161057.1|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr7_+_131032061_131032076	0.131075	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084509.3|Dmbt1|ENSMUSG00000047517.9|deleted in malignant brain tumors 1
mm10_v2_chr9_+_7571396_7571463	0.130569	Hoxd11_Cdx1_Hoxc11	ENSMUST00000120900.1|Mmp27|ENSMUSG00000070323.5|matrix metallopeptidase 27 	ENSMUST00000093896.3|Mmp27|ENSMUSG00000070323.5|matrix metallopeptidase 27 	ENSMUST00000151853.1|Mmp27|ENSMUSG00000070323.5|matrix metallopeptidase 27 	ENSMUST00000152878.1|Mmp27|ENSMUSG00000070323.5|matrix metallopeptidase 27
mm10_v2_chr17_+_3397189_3397207	0.128092	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr8_+_121116163_121116177	0.127782	Hoxd11_Cdx1_Hoxc11	ENSMUST00000054691.6|Foxc2|ENSMUSG00000046714.6|forkhead box C2
mm10_v2_chr13_-_23914998_23915011	0.126623	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021769.8|Slc17a4|ENSMUSG00000021336.10|solute carrier family 17 (sodium phosphate), member 4 	ENSMUST00000110407.2|Slc17a4|ENSMUSG00000021336.10|solute carrier family 17 (sodium phosphate), member 4
mm10_v2_chr2_-_170194033_170194064	0.125671	Hoxd11_Cdx1_Hoxc11	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr4_+_144893077_144893103	0.12141	Hoxd11_Cdx1_Hoxc11	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr13_+_24943144_24943164	0.119902	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021773.5|Gpld1|ENSMUSG00000021340.6|glycosylphosphatidylinositol specific phospholipase D1
mm10_v2_chr1_-_45503282_45503282	0.119381	Hoxd11_Cdx1_Hoxc11	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr2_+_36230426_36230491	0.119203	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr7_+_140763739_140763828	0.117102	Hoxd11_Cdx1_Hoxc11	ENSMUST00000026552.7|Cyp2e1|ENSMUSG00000025479.8|cytochrome P450, family 2, subfamily e, polypeptide 1
mm10_v2_chrX_+_96455359_96455411	0.108419	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr3_-_88410295_88410351	0.104107	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr4_-_141825997_141826160	0.100903	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102481.3|Cela2a|ENSMUSG00000058579.5|chymotrypsin-like elastase family, member 2A
mm10_v2_chr8_+_57320975_57320992	0.0964669	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040104.3|Hand2|ENSMUSG00000038193.3|heart and neural crest derivatives expressed transcript 2
mm10_v2_chr6_-_52218686_52218716	0.0935561	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134367.2|Hoxa7|ENSMUSG00000038236.6|homeobox A7
mm10_v2_chr17_-_70998010_70998013	0.0889091	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024846.6|Myl12a|ENSMUSG00000024048.8|myosin, light chain 12A, regulatory, non-sarcomeric
mm10_v2_chr6_+_78380700_78380715	0.0883534	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101272.1|Reg3a|ENSMUSG00000079516.1|regenerating islet-derived 3 alpha
mm10_v2_chr7_-_119459266_119459280	0.0856622	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033255.5|Gp2|ENSMUSG00000030954.9|glycoprotein 2 (zymogen granule membrane)
mm10_v2_chr2_+_178141920_178141939	0.0846858	Hoxd11_Cdx1_Hoxc11	ENSMUST00000103066.3|Phactr3|ENSMUSG00000027525.11|phosphatase and actin regulator 3
mm10_v2_chr1_+_45311538_45311638	0.0833916	Hoxd11_Cdx1_Hoxc11	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr3_+_66219909_66219927	0.08081	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029421.5|Ptx3|ENSMUSG00000027832.5|pentraxin related gene
mm10_v2_chr10_+_26822560_26822602	0.0797241	Hoxd11_Cdx1_Hoxc11	ENSMUST00000135866.1|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr13_-_3945349_3945349	0.0788604	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058610.7|Ucn3|ENSMUSG00000044988.7|urocortin 3
mm10_v2_chr6_+_135065651_135065682	0.0779438	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050104.7|Gprc5a|ENSMUSG00000046733.7|G protein-coupled receptor, family C, group 5, member A
mm10_v2_chr1_+_159737510_159737510	0.0764488	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111669.3|Tnr|ENSMUSG00000015829.8|tenascin R
mm10_v2_chr2_-_32387760_32387797	0.0738691	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050785.8|Lcn2|ENSMUSG00000026822.9|lipocalin 2
mm10_v2_chrX_+_106920618_106920632	0.073335	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060576.7|Lpar4|ENSMUSG00000049929.7|lysophosphatidic acid receptor 4
mm10_v2_chr5_-_25100624_25100657	0.0727079	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030784.7|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr14_-_20496780_20496901	0.072495	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr2_-_18048347_18048449	0.0713499	Hoxd11_Cdx1_Hoxc11	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr12_+_33147754_33147770	0.0700265	Hoxd11_Cdx1_Hoxc11	ENSMUST00000146040.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1 	ENSMUST00000125192.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chr10_+_119992916_119992958	0.0681777	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr1_-_37496095_37496156	0.0670085	Hoxd11_Cdx1_Hoxc11	ENSMUST00000148047.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A 	ENSMUST00000143636.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr2_-_18048784_18048822	0.0661288	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr19_-_40994133_40994148	0.0645975	Hoxd11_Cdx1_Hoxc11	ENSMUST00000117695.1|Blnk|ENSMUSG00000061132.7|B cell linker
mm10_v2_chr7_-_30612731_30612744	0.062702	Hoxd11_Cdx1_Hoxc11	ENSMUST00000006476.4|Upk1a|ENSMUSG00000006313.4|uroplakin 1A
mm10_v2_chr7_-_45062393_45062436	0.0625155	Hoxd11_Cdx1_Hoxc11	ENSMUST00000129101.1|Prrg2|ENSMUSG00000007837.4|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm10_v2_chr4_+_5724304_5724357	0.0620456	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108380.1|Fam110b|ENSMUSG00000049119.8|family with sequence similarity 110, member B
mm10_v2_chr10_-_60938123_60938142	0.0611788	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036304.3|Pldi|ENSMUSG00000037247.3|polymorphic derived intron containing
mm10_v2_chr6_+_83086365_83086365	0.0611615	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041265.2|Lbx2|ENSMUSG00000034968.2|ladybird homeobox homolog 2 (Drosophila)
mm10_v2_chr9_-_123678873_123678885	0.0606756	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr1_-_144249134_144249242	0.060647	Hoxd11_Cdx1_Hoxc11	ENSMUST00000172388.1|Rgs1|ENSMUSG00000026358.7|regulator of G-protein signaling 1
mm10_v2_chr6_-_52226165_52226196	0.0592086	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114425.2|Hoxa9|ENSMUSG00000038227.9|homeobox A9
mm10_v2_chr13_-_99344652_99344706	0.0584178	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022153.6|Ptcd2|ENSMUSG00000021650.6|pentatricopeptide repeat domain 2
mm10_v2_chr2_+_58567360_58567408	0.0566448	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071543.5|Upp2|ENSMUSG00000026839.10|uridine phosphorylase 2
mm10_v2_chr5_-_73256555_73256636	0.0556897	Hoxd11_Cdx1_Hoxc11	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr16_+_45224315_45224346	0.0554518	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr7_+_25306085_25306157	0.0552375	Hoxd11_Cdx1_Hoxc11	ENSMUST00000119703.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145 	ENSMUST00000108409.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145
mm10_v2_chr9_+_62858085_62858138	0.0539275	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr6_-_52234902_52234960	0.0537563	Hoxd11_Cdx1_Hoxc11	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr2_+_65930117_65930190	0.0524221	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr5_-_142906702_142906754	0.0520329	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr15_+_101473472_101473478	0.0504664	Hoxd11_Cdx1_Hoxc11	ENSMUST00000088049.3|Krt86|ENSMUSG00000067614.4|keratin 86
mm10_v2_chr3_-_144819494_144819494	0.048977	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029929.7|Clca2|ENSMUSG00000028262.9|chloride channel calcium activated 2
mm10_v2_chr7_-_126649556_126649580	0.0488739	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084587.1|2510046G10Rik|ENSMUSG00000066175.1|RIKEN cDNA 2510046G10 gene
mm10_v2_chr6_-_13839916_13839942	0.0473881	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr8_-_69902558_69902558	0.0470876	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110167.3|Ndufa13|ENSMUSG00000036199.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
mm10_v2_chr10_+_5593718_5593739	0.0464261	Hoxd11_Cdx1_Hoxc11	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr14_+_66868850_66868850	0.0462828	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100453.1|Gm5464|ENSMUSG00000075553.1|predicted gene 5464
mm10_v2_chr4_+_136284658_136284686	0.0461398	Hoxd11_Cdx1_Hoxc11	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr8_+_25720054_25720099	0.0460717	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr1_+_12692430_12692485	0.0455389	Hoxd11_Cdx1_Hoxc11	ENSMUST00000180062.1|Sulf1|ENSMUSG00000016918.9|sulfatase 1 	ENSMUST00000177608.1|Sulf1|ENSMUSG00000016918.9|sulfatase 1
mm10_v2_chr12_+_33147693_33147716	0.0453282	Hoxd11_Cdx1_Hoxc11	ENSMUST00000077456.6|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1 	ENSMUST00000110824.2|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chr8_-_104293178_104293204	0.0451922	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034344.9|Cmtm2a|ENSMUSG00000074127.5|CKLF-like MARVEL transmembrane domain containing 2A
mm10_v2_chr4_+_136284708_136284775	0.0450581	Hoxd11_Cdx1_Hoxc11	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr18_-_32036941_32037019	0.0448459	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134663.1|Myo7b|ENSMUSG00000024388.10|myosin VIIB
mm10_v2_chr6_-_8259098_8259173	0.0434318	Hoxd11_Cdx1_Hoxc11	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr6_-_99044414_99044459	0.043194	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chrX_+_133908418_133908430	0.0428935	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033606.8|Srpx2|ENSMUSG00000031253.9|sushi-repeat-containing protein, X-linked 2 	ENSMUST00000113303.1|Srpx2|ENSMUSG00000031253.9|sushi-repeat-containing protein, X-linked 2 	ENSMUST00000165805.1|Srpx2|ENSMUSG00000031253.9|sushi-repeat-containing protein, X-linked 2
mm10_v2_chr6_+_8259288_8259312	0.0426542	Hoxd11_Cdx1_Hoxc11	ENSMUST00000159335.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr2_+_20737306_20737321	0.0425813	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chrX_+_133908441_133908462	0.0419686	Hoxd11_Cdx1_Hoxc11	ENSMUST00000113304.1|Srpx2|ENSMUSG00000031253.9|sushi-repeat-containing protein, X-linked 2
mm10_v2_chr18_+_37655891_37655915	0.0419074	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr19_+_53529100_53529109	0.0417488	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr9_+_121950988_121951044	0.0416014	Hoxd11_Cdx1_Hoxc11	ENSMUST00000043011.7|Fam198a|ENSMUSG00000038233.8|family with sequence similarity 198, member A
mm10_v2_chr5_+_17962621_17962621	0.0396571	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030561.7|Gnat3|ENSMUSG00000028777.7|guanine nucleotide binding protein, alpha transducing 3
mm10_v2_chr6_+_30610984_30611026	0.0394019	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062758.4|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr6_-_87335758_87335775	0.0387187	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042025.9|Antxr1|ENSMUSG00000033420.10|anthrax toxin receptor 1
mm10_v2_chr17_+_35016576_35016638	0.0383991	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007245.1|Vwa7|ENSMUSG00000007030.2|von Willebrand factor A domain containing 7 	ENSMUST00000172499.1|Vwa7|ENSMUSG00000007030.2|von Willebrand factor A domain containing 7
mm10_v2_chr15_+_100761741_100761797	0.0383336	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr6_-_122340525_122340561	0.0376911	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112600.2|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr5_-_6876523_6876523	0.0373442	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164784.1|Zfp804b|ENSMUSG00000092094.1|zinc finger protein 804B
mm10_v2_chr12_+_105453831_105453919	0.0371743	Hoxd11_Cdx1_Hoxc11	ENSMUST00000178224.1|D430019H16Rik|ENSMUSG00000094910.1|RIKEN cDNA D430019H16 gene
mm10_v2_chr3_+_84666192_84666288	0.0360326	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107682.1|Tmem154|ENSMUSG00000056498.7|transmembrane protein 154
mm10_v2_chr13_-_56895737_56895793	0.0358492	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022023.6|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7 	ENSMUST00000109871.1|Trpc7|ENSMUSG00000021541.7|transient receptor potential cation channel, subfamily C, member 7
mm10_v2_chr5_+_137641334_137641437	0.0353864	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177466.1|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide 	ENSMUST00000166099.2|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide
mm10_v2_chr6_-_144209558_144209647	0.0341806	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr11_-_103267405_103267472	0.0332457	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr9_+_65890237_65890343	0.0329272	Hoxd11_Cdx1_Hoxc11	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr12_+_105604091_105604091	0.0326101	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041229.4|Bdkrb1|ENSMUSG00000041347.5|bradykinin receptor, beta 1
mm10_v2_chr7_+_45062429_45062505	0.0325134	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107830.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000003513.3|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000107829.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000150609.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein
mm10_v2_chr16_+_42907563_42907684	0.0322649	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr19_-_50678642_50678702	0.0322442	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072685.6|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1 	ENSMUST00000164039.2|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1
mm10_v2_chr3_+_96221111_96221134	0.0321597	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr5_+_43515513_43515588	0.031933	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167522.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000144558.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000076939.6|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7
mm10_v2_chr4_-_133968611_133968650	0.0316832	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102552.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr6_-_124965207_124965243	0.0313017	Hoxd11_Cdx1_Hoxc11	ENSMUST00000148485.1|Cops7a|ENSMUSG00000030127.9|COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
mm10_v2_chr1_-_74600564_74600622	0.0311033	Hoxd11_Cdx1_Hoxc11	ENSMUST00000127938.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000154874.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25
mm10_v2_chr14_-_66868572_66868688	0.0308013	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr10_-_42583628_42583639	0.0307189	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr16_-_4880284_4880315	0.0306851	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr1_-_172027251_172027268	0.030602	Hoxd11_Cdx1_Hoxc11	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr13_+_49582745_49582778	0.0289923	Hoxd11_Cdx1_Hoxc11	ENSMUST00000065494.7|Omd|ENSMUSG00000048368.8|osteomodulin
mm10_v2_chr7_-_5014645_5014697	0.0284814	Hoxd11_Cdx1_Hoxc11	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr1_+_153874335_153874354	0.0273275	Hoxd11_Cdx1_Hoxc11	ENSMUST00000055314.3|Gm5531|ENSMUSG00000043282.3|predicted gene 5531
mm10_v2_chr13_+_19214103_19214103	0.0268499	Hoxd11_Cdx1_Hoxc11	ENSMUST00000103558.1|Tcrg-C1|ENSMUSG00000076749.1|T cell receptor gamma, constant 1
mm10_v2_chr5_+_138187485_138187521	0.026317	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr5_+_145204523_145204668	0.0262653	Hoxd11_Cdx1_Hoxc11	ENSMUST00000085671.3|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5 	ENSMUST00000031601.7|Zkscan5|ENSMUSG00000055991.9|zinc finger with KRAB and SCAN domains 5
mm10_v2_chr1_-_165934900_165935036	0.0258798	Hoxd11_Cdx1_Hoxc11	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr19_-_6987621_6987764	0.0254201	Hoxd11_Cdx1_Hoxc11	ENSMUST00000130048.1|Vegfb|ENSMUSG00000024962.7|vascular endothelial growth factor B 	ENSMUST00000025914.6|Vegfb|ENSMUSG00000024962.7|vascular endothelial growth factor B
mm10_v2_chr8_-_105943382_105943407	0.0246569	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038896.7|Lcat|ENSMUSG00000035237.7|lecithin cholesterol acyltransferase
mm10_v2_chr11_+_115603920_115603969	0.0242436	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058109.8|Mrps7|ENSMUSG00000046756.10|mitchondrial ribosomal protein S7
mm10_v2_chr19_-_46395722_46395756	0.023718	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040270.4|Actr1a|ENSMUSG00000025228.4|ARP1 actin-related protein 1A, centractin alpha
mm10_v2_chr16_-_55838827_55838899	0.0230505	Hoxd11_Cdx1_Hoxc11	ENSMUST00000096026.2|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000036273.6|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000114457.1|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
mm10_v2_chrX_-_105928547_105928583	0.0229732	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101305.2|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr1_-_72536930_72536999	0.0228488	Hoxd11_Cdx1_Hoxc11	ENSMUST00000047786.5|March4|ENSMUSG00000039372.5|membrane-associated ring finger (C3HC4) 4
mm10_v2_chr2_+_29346803_29346842	0.0222282	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028139.4|Med27|ENSMUSG00000026799.9|mediator complex subunit 27 	ENSMUST00000113830.4|Med27|ENSMUSG00000026799.9|mediator complex subunit 27
mm10_v2_chr1_-_157256682_157256701	0.0220291	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr15_-_79774383_79774394	0.0219792	Hoxd11_Cdx1_Hoxc11	ENSMUST00000069877.5|Dnal4|ENSMUSG00000022420.9|dynein, axonemal, light chain 4
mm10_v2_chr2_+_116067213_116067250	0.0214026	Hoxd11_Cdx1_Hoxc11	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chrM_+_7759_7927	0.0212618	Hoxd11_Cdx1_Hoxc11	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr14_+_28511344_28511405	0.0209003	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112272.1|Wnt5a|ENSMUSG00000021994.8|wingless-related MMTV integration site 5A
mm10_v2_chr3_-_95106779_95106897	0.0207432	Hoxd11_Cdx1_Hoxc11	ENSMUST00000005768.7|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107232.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha 	ENSMUST00000107236.2|Pip5k1a|ENSMUSG00000028126.10|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm10_v2_chr3_-_19265007_19265023	0.0204956	Hoxd11_Cdx1_Hoxc11	ENSMUST00000091314.4|Pde7a|ENSMUSG00000069094.6|phosphodiesterase 7A
mm10_v2_chr17_-_90455872_90456026	0.0204924	Hoxd11_Cdx1_Hoxc11	ENSMUST00000174337.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000172466.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr11_-_102316691_102316708	0.0202224	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107115.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000128016.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr6_+_30611029_30611051	0.0198478	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115138.1|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr15_-_79774408_79774474	0.0196469	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023055.6|Dnal4|ENSMUSG00000022420.9|dynein, axonemal, light chain 4
mm10_v2_chr14_+_76504185_76504249	0.0196146	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177207.1|Tsc22d1|ENSMUSG00000022010.13|TSC22 domain family, member 1
mm10_v2_chr9_-_8042785_8042882	0.0193892	Hoxd11_Cdx1_Hoxc11	ENSMUST00000065291.1|9230110C19Rik|ENSMUSG00000053070.4|RIKEN cDNA 9230110C19 gene
mm10_v2_chr6_-_144209448_144209469	0.0192741	Hoxd11_Cdx1_Hoxc11	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_+_145785980_145786152	0.0192717	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110005.1|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2 	ENSMUST00000094480.4|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2
mm10_v2_chr11_-_19018714_19018828	0.0191348	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177417.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr10_-_25200110_25200178	0.0179128	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr10_-_105574435_105574451	0.0176045	Hoxd11_Cdx1_Hoxc11	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr3_-_89960562_89960629	0.0175538	Hoxd11_Cdx1_Hoxc11	ENSMUST00000069805.7|Atp8b2|ENSMUSG00000060671.6|ATPase, class I, type 8B, member 2
mm10_v2_chr2_+_155611175_155611216	0.0173559	Hoxd11_Cdx1_Hoxc11	ENSMUST00000092995.5|Myh7b|ENSMUSG00000074652.3|myosin, heavy chain 7B, cardiac muscle, beta
mm10_v2_chr5_+_29378604_29378699	0.0168511	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181005.1|4632411P08Rik|ENSMUSG00000097561.1|RIKEN cDNA 4632411P08 gene
mm10_v2_chrM_+_3906_3926	0.016097	Hoxd11_Cdx1_Hoxc11	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr8_-_79248537_79248583	0.0159617	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034109.4|1700011L22Rik|ENSMUSG00000031682.4|RIKEN cDNA 1700011L22 gene
mm10_v2_chr2_-_24048857_24048868	0.0156719	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114497.1|Hnmt|ENSMUSG00000026986.8|histamine N-methyltransferase
mm10_v2_chr4_-_133967893_133967951	0.0154046	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100472.3|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2 	ENSMUST00000136327.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr11_-_97700327_97700497	0.0150348	Hoxd11_Cdx1_Hoxc11	ENSMUST00000018681.7|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2
mm10_v2_chr6_-_87981482_87981622	0.0148888	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056403.5|H1fx|ENSMUSG00000044927.5|H1 histone family, member X
mm10_v2_chr11_-_101894355_101894374	0.0146054	Hoxd11_Cdx1_Hoxc11	ENSMUST00000057054.7|Meox1|ENSMUSG00000001493.9|mesenchyme homeobox 1
mm10_v2_chr11_-_84067063_84067095	0.0145611	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108101.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr13_+_22035821_22035848	0.0143881	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110455.2|Hist1h2bk|ENSMUSG00000062727.3|histone cluster 1, H2bk
mm10_v2_chr18_-_42899470_42899643	0.014267	Hoxd11_Cdx1_Hoxc11	ENSMUST00000120632.1|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr5_+_107497718_107497759	0.0142581	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr9_-_39604124_39604403	0.0141112	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042485.4|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984 	ENSMUST00000141370.1|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984
mm10_v2_chr7_-_100583072_100583124	0.0141085	Hoxd11_Cdx1_Hoxc11	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr5_-_101665195_101665226	0.0140647	Hoxd11_Cdx1_Hoxc11	ENSMUST00000044125.8|Nkx6-1|ENSMUSG00000035187.8|NK6 homeobox 1
mm10_v2_chr10_+_69787431_69787458	0.0139494	Hoxd11_Cdx1_Hoxc11	ENSMUST00000183240.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr2_+_31759932_31759989	0.0136983	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr11_-_19018956_19018973	0.0134817	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr10_-_39122277_39122314	0.0133649	Hoxd11_Cdx1_Hoxc11	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr3_-_144849301_144849357	0.0128953	Hoxd11_Cdx1_Hoxc11	ENSMUST00000159989.1|Clca4|ENSMUSG00000037033.9|chloride channel calcium activated 4
mm10_v2_chr2_-_116064721_116064749	0.0128897	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110906.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr7_-_19023538_19023546	0.0128255	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036018.5|Foxa3|ENSMUSG00000040891.5|forkhead box A3
mm10_v2_chr6_-_112947246_112947277	0.0127925	Hoxd11_Cdx1_Hoxc11	ENSMUST00000088373.4|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr11_+_77216180_77216287	0.0125247	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr1_-_175688353_175688353	0.0124326	Hoxd11_Cdx1_Hoxc11	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr7_-_73537621_73537766	0.012401	Hoxd11_Cdx1_Hoxc11	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr1_+_180109192_180109265	0.0122614	Hoxd11_Cdx1_Hoxc11	ENSMUST00000143176.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000135056.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr6_-_97617536_97617597	0.0119371	Hoxd11_Cdx1_Hoxc11	ENSMUST00000113355.2|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr15_-_81104999_81105083	0.0118119	Hoxd11_Cdx1_Hoxc11	ENSMUST00000109579.2|Mkl1|ENSMUSG00000042292.10|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm10_v2_chr16_+_11405648_11405713	0.0115449	Hoxd11_Cdx1_Hoxc11	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr2_-_33086366_33086447	0.0113578	Hoxd11_Cdx1_Hoxc11	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr19_+_29951808_29951819	0.0112825	Hoxd11_Cdx1_Hoxc11	ENSMUST00000136850.1|Il33|ENSMUSG00000024810.10|interleukin 33
mm10_v2_chr8_-_47352348_47352367	0.0109677	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr18_+_13006990_13006990	0.0105649	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041676.2|Hrh4|ENSMUSG00000037346.4|histamine receptor H4
mm10_v2_chr18_+_36939178_36939318	0.0104605	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115662.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr7_+_4922251_4922251	0.0104071	Hoxd11_Cdx1_Hoxc11	ENSMUST00000047309.5|Nat14|ENSMUSG00000035285.5|N-acetyltransferase 14
mm10_v2_chr10_+_37139558_37139558	0.0102087	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr10_-_34044302_34044317	0.0101626	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048052.5|Fam26d|ENSMUSG00000039508.5|family with sequence similarity 26, member D
mm10_v2_chrX_+_36195968_36195993	0.0101595	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115256.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr5_+_63812447_63812538	0.010115	Hoxd11_Cdx1_Hoxc11	ENSMUST00000081747.3|0610040J01Rik|ENSMUSG00000060512.3|RIKEN cDNA 0610040J01 gene
mm10_v2_chr4_+_108479081_108479224	0.00977915	Hoxd11_Cdx1_Hoxc11	ENSMUST00000155068.1|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr2_-_79456750_79456761	0.00961062	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr3_-_96220880_96220899	0.0095334	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090782.3|Hist2h2ac|ENSMUSG00000068855.3|histone cluster 2, H2ac
mm10_v2_chr19_-_7341792_7341829	0.00950726	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr19_+_29945782_29945799	0.00943177	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025724.8|Il33|ENSMUSG00000024810.10|interleukin 33
mm10_v2_chr18_-_37020679_37020679	0.00938088	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097612.2|Gm10545|ENSMUSG00000073594.2|predicted gene 10545
mm10_v2_chrX_+_36195938_36195946	0.00885793	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048067.3|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr7_-_45061706_45061740	0.00868094	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107832.1|Prrg2|ENSMUSG00000007837.4|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm10_v2_chr11_-_120549695_120549728	0.00865093	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034913.4|Fam195b|ENSMUSG00000061111.8|family with sequence similarity 195, member B
mm10_v2_chr9_-_64172879_64172918	0.00837088	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176299.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000130127.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000176794.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000177045.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein
mm10_v2_chr6_-_12749193_12749253	0.00836835	Hoxd11_Cdx1_Hoxc11	ENSMUST00000046121.6|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A 	ENSMUST00000172356.1|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A
mm10_v2_chr9_-_44799179_44799307	0.00836195	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114705.1|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25 	ENSMUST00000002100.7|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25
mm10_v2_chr2_+_152669461_152669539	0.00805277	Hoxd11_Cdx1_Hoxc11	ENSMUST00000125366.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000109825.1|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000089059.2|H13|ENSMUSG00000019188.10|histocompatibility 13 	ENSMUST00000079247.3|H13|ENSMUSG00000019188.10|histocompatibility 13
mm10_v2_chr16_-_32877723_32877766	0.00802786	Hoxd11_Cdx1_Hoxc11	ENSMUST00000119810.1|1700021K19Rik|ENSMUSG00000035629.11|RIKEN cDNA 1700021K19 gene
mm10_v2_chr1_-_155099630_155099636	0.00786674	Hoxd11_Cdx1_Hoxc11	ENSMUST00000055322.4|Ier5|ENSMUSG00000056708.4|immediate early response 5
mm10_v2_chr7_-_127208423_127208504	0.00773253	Hoxd11_Cdx1_Hoxc11	ENSMUST00000120705.1|Tbc1d10b|ENSMUSG00000042492.6|TBC1 domain family, member 10b
mm10_v2_chr12_-_55302974_55303014	0.00762505	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021410.8|Ppp2r3c|ENSMUSG00000021022.8|protein phosphatase 2, regulatory subunit B'', gamma
mm10_v2_chr2_-_46442681_46442713	0.00753512	Hoxd11_Cdx1_Hoxc11	ENSMUST00000123911.1|Gm13470|ENSMUSG00000086644.1|predicted gene 13470
mm10_v2_chr16_-_35769356_35769384	0.00752188	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chr11_+_82911253_82911294	0.00750857	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164945.1|Unc45b|ENSMUSG00000018845.8|unc-45 homolog B (C. elegans) 	ENSMUST00000018989.7|Unc45b|ENSMUSG00000018845.8|unc-45 homolog B (C. elegans)
mm10_v2_chr1_-_120270253_120270423	0.00736597	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112639.1|Steap3|ENSMUSG00000026389.10|STEAP family member 3
mm10_v2_chr7_+_126649297_126649344	0.00685873	Hoxd11_Cdx1_Hoxc11	ENSMUST00000032956.8|Ccdc101|ENSMUSG00000030714.8|coiled-coil domain containing 101
mm10_v2_chr4_+_62286441_62286516	0.00681603	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084530.2|Slc31a2|ENSMUSG00000066152.5|solute carrier family 31, member 2
mm10_v2_chrX_+_36195904_36195932	0.00674711	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115258.2|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr19_-_38125258_38125321	0.00668349	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025951.6|Rbp4|ENSMUSG00000024990.6|retinol binding protein 4, plasma
mm10_v2_chr6_+_125215551_125215591	0.00648052	Hoxd11_Cdx1_Hoxc11	ENSMUST00000032487.7|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000100942.2|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000063588.8|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1
mm10_v2_chr2_-_119208767_119208802	0.00643166	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038439.3|Dnajc17|ENSMUSG00000034278.3|DnaJ (Hsp40) homolog, subfamily C, member 17
mm10_v2_chr3_-_144760841_144760868	0.00637832	Hoxd11_Cdx1_Hoxc11	ENSMUST00000059091.5|Clca1|ENSMUSG00000056025.6|chloride channel calcium activated 1
mm10_v2_chr12_+_108792946_108792988	0.00619934	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021692.7|Yy1|ENSMUSG00000021264.11|YY1 transcription factor
mm10_v2_chr2_+_181767040_181767073	0.00608108	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr15_-_98934522_98934586	0.00597794	Hoxd11_Cdx1_Hoxc11	ENSMUST00000077577.7|Tuba1b|ENSMUSG00000023004.8|tubulin, alpha 1B
mm10_v2_chr1_+_58445151_58445307	0.00587783	Hoxd11_Cdx1_Hoxc11	ENSMUST00000087521.6|Nif3l1|ENSMUSG00000026036.11|Ngg1 interacting factor 3-like 1 (S. pombe) 	ENSMUST00000114337.1|Nif3l1|ENSMUSG00000026036.11|Ngg1 interacting factor 3-like 1 (S. pombe)
mm10_v2_chr2_-_64393853_64393862	0.00578354	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142353.1|Gm13575|ENSMUSG00000087702.1|predicted gene 13575
mm10_v2_chr5_-_148552783_148552843	0.00574444	Hoxd11_Cdx1_Hoxc11	ENSMUST00000079324.7|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3 	ENSMUST00000164904.1|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3
mm10_v2_chr18_-_35498856_35498925	0.00569053	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chrX_+_36195950_36195959	0.00560265	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115257.1|Zcchc12|ENSMUSG00000036699.6|zinc finger, CCHC domain containing 12
mm10_v2_chr9_-_21989427_21989456	0.00550479	Hoxd11_Cdx1_Hoxc11	ENSMUST00000045726.6|Rgl3|ENSMUSG00000040146.8|ral guanine nucleotide dissociation stimulator-like 3
mm10_v2_chr19_+_47067721_47067768	0.00536578	Hoxd11_Cdx1_Hoxc11	ENSMUST00000026027.5|Taf5|ENSMUSG00000025049.5|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr7_+_90380646_90380646	0.00518351	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098310.2|Sytl2|ENSMUSG00000030616.8|synaptotagmin-like 2
mm10_v2_chr15_+_76268076_76268093	0.00511813	Hoxd11_Cdx1_Hoxc11	ENSMUST00000074173.3|Spatc1|ENSMUSG00000049653.4|spermatogenesis and centriole associated 1
mm10_v2_chr18_-_6490808_6490869	0.00486822	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028100.6|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila) 	ENSMUST00000050542.5|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr17_+_35059035_35059130	0.00480932	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007255.6|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2 	ENSMUST00000174493.1|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2
mm10_v2_chr4_-_47057296_47057356	0.00466241	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107747.1|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6 	ENSMUST00000084616.2|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6
mm10_v2_chr1_+_164048214_164048234	0.00461455	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr4_-_36136463_36136463	0.00451883	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098151.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr2_+_30171486_30171497	0.00422507	Hoxd11_Cdx1_Hoxc11	ENSMUST00000015481.5|Endog|ENSMUSG00000015337.5|endonuclease G
mm10_v2_chr11_+_98026918_98026931	0.00415724	Hoxd11_Cdx1_Hoxc11	ENSMUST00000017548.6|Rpl19|ENSMUSG00000017404.6|ribosomal protein L19
mm10_v2_chr15_+_6422240_6422327	0.0040503	Hoxd11_Cdx1_Hoxc11	ENSMUST00000163082.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr4_+_136143497_136143497	0.00399708	Hoxd11_Cdx1_Hoxc11	ENSMUST00000008016.2|Id3|ENSMUSG00000007872.3|inhibitor of DNA binding 3
mm10_v2_chr1_+_160978576_160978606	0.00367964	Hoxd11_Cdx1_Hoxc11	ENSMUST00000064725.5|Serpinc1|ENSMUSG00000026715.7|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm10_v2_chr5_+_33018816_33018865	0.00358877	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019109.7|Ywhah|ENSMUSG00000018965.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm10_v2_chr11_-_120624973_120625014	0.00353853	Hoxd11_Cdx1_Hoxc11	ENSMUST00000106183.2|Sirt7|ENSMUSG00000025138.8|sirtuin 7 	ENSMUST00000080202.5|Sirt7|ENSMUSG00000025138.8|sirtuin 7
mm10_v2_chr3_+_89459118_89459214	0.00350556	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr4_-_49408042_49408151	0.00332644	Hoxd11_Cdx1_Hoxc11	ENSMUST00000081541.2|Acnat2|ENSMUSG00000060317.3|acyl-coenzyme A amino acid N-acyltransferase 2
mm10_v2_chrX_-_74246534_74246556	0.00331616	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101454.2|Flna|ENSMUSG00000031328.9|filamin, alpha 	ENSMUST00000033699.6|Flna|ENSMUSG00000031328.9|filamin, alpha
mm10_v2_chr11_-_109473220_109473294	0.0032906	Hoxd11_Cdx1_Hoxc11	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr3_+_134236483_134236500	0.003246	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr13_-_22035589_22035643	0.00301566	Hoxd11_Cdx1_Hoxc11	ENSMUST00000091742.4|Hist1h2ah|ENSMUSG00000069302.4|histone cluster 1, H2ah
mm10_v2_chr4_+_31964081_31964263	0.00301109	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037607.4|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000080933.6|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108183.1|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108184.2|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7
mm10_v2_chr11_-_77607812_77607860	0.00199688	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058496.7|Taok1|ENSMUSG00000017291.7|TAO kinase 1
mm10_v2_chr9_-_51328898_51328923	0.00196124	Hoxd11_Cdx1_Hoxc11	ENSMUST00000039959.4|1810046K07Rik|ENSMUSG00000036027.5|RIKEN cDNA 1810046K07 gene
mm10_v2_chr7_+_30565410_30565432	0.00176531	Hoxd11_Cdx1_Hoxc11	ENSMUST00000043850.7|Igflr1|ENSMUSG00000036826.8|IGF-like family receptor 1
mm10_v2_chr4_-_155086271_155086379	0.00175684	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030914.3|Rer1|ENSMUSG00000029048.3|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
mm10_v2_chr5_+_32611171_32611245	0.00173861	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr9_+_21835506_21835516	0.00134939	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058777.6|Gm6484|ENSMUSG00000047822.7|predicted gene 6484
mm10_v2_chr3_+_5218589_5218614	0.00120754	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr6_-_144209471_144209487	0.000549012	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_+_29965560_29965717	0.000310666	Hoxd11_Cdx1_Hoxc11	ENSMUST00000113717.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113719.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000100225.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113741.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000095083.4|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000046257.7|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1
mm10_v2_chr15_-_79062866_79062941	7.31742e-05	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
