mm10_v2_chr6_+_96115249_96115311	1.25886	Lhx4	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr16_-_22161450_22161450	1.22918	Lhx4	ENSMUST00000115379.1|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chr4_+_102589687_102589843	1.20044	Lhx4	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr19_+_5474681_5474775	1.06646	Lhx4	ENSMUST00000165485.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000166253.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000167371.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000167855.1|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2 	ENSMUST00000070118.7|Efemp2|ENSMUSG00000024909.8|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm10_v2_chr14_-_110755100_110755152	0.970272	Lhx4	ENSMUST00000078386.2|Slitrk6|ENSMUSG00000045871.4|SLIT and NTRK-like family, member 6
mm10_v2_chr4_+_145585166_145585211	0.931321	Lhx4	ENSMUST00000105739.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212 	ENSMUST00000119718.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212
mm10_v2_chr4_-_45532470_45532470	0.783049	Lhx4	ENSMUST00000147448.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr11_+_59306920_59306935	0.761161	Lhx4	ENSMUST00000000128.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A 	ENSMUST00000108783.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A
mm10_v2_chr7_+_45621805_45621825	0.75536	Lhx4	ENSMUST00000033100.4|Izumo1|ENSMUSG00000064158.4|izumo sperm-egg fusion 1
mm10_v2_chr4_-_147702553_147702553	0.676325	Lhx4	ENSMUST00000117638.1|Zfp534|ENSMUSG00000062518.7|zinc finger protein 534
mm10_v2_chr12_-_40199315_40199331	0.660869	Lhx4	ENSMUST00000095760.2|Lsmem1|ENSMUSG00000071342.4|leucine-rich single-pass membrane protein 1
mm10_v2_chr15_+_31224371_31224400	0.633986	Lhx4	ENSMUST00000044524.9|Dap|ENSMUSG00000039168.9|death-associated protein
mm10_v2_chr3_-_59220150_59220259	0.580846	Lhx4	ENSMUST00000170388.1|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr16_-_44016387_44016436	0.5707	Lhx4	ENSMUST00000036174.3|Gramd1c|ENSMUSG00000036292.7|GRAM domain containing 1C
mm10_v2_chr13_+_67833235_67833235	0.566153	Lhx4	ENSMUST00000060609.7|Gm10037|ENSMUSG00000058246.6|predicted gene 10037
mm10_v2_chr1_-_162866502_162866616	0.564271	Lhx4	ENSMUST00000046049.7|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr6_-_129385497_129385510	0.550526	Lhx4	ENSMUST00000032261.6|Clec12b|ENSMUSG00000030158.6|C-type lectin domain family 12, member B
mm10_v2_chr10_-_20548320_20548333	0.54496	Lhx4	ENSMUST00000169404.1|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr7_+_140941550_140941615	0.517774	Lhx4	ENSMUST00000079403.4|Athl1|ENSMUSG00000062031.6|ATH1, acid trehalase-like 1 (yeast)
mm10_v2_chr6_-_115592571_115592599	0.501597	Lhx4	ENSMUST00000112957.1|2510049J12Rik|ENSMUSG00000068011.4|RIKEN cDNA 2510049J12 gene
mm10_v2_chr17_+_17402672_17402771	0.495417	Lhx4	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr15_+_34453285_34453312	0.491964	Lhx4	ENSMUST00000060894.7|BC030476|ENSMUSG00000044726.7|cDNA sequence BC030476
mm10_v2_chr15_+_98571004_98571026	0.490708	Lhx4	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr6_-_3399545_3399574	0.479524	Lhx4	ENSMUST00000120087.3|Samd9l|ENSMUSG00000047735.12|sterile alpha motif domain containing 9-like
mm10_v2_chr12_-_12941827_12941914	0.459321	Lhx4	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr10_-_20548361_20548470	0.458839	Lhx4	ENSMUST00000164195.1|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr11_+_62847111_62847132	0.458817	Lhx4	ENSMUST00000150989.1|Fbxw10|ENSMUSG00000090173.2|F-box and WD-40 domain protein 10 	ENSMUST00000176577.1|Fbxw10|ENSMUSG00000090173.2|F-box and WD-40 domain protein 10
mm10_v2_chr6_+_38381469_38381528	0.453687	Lhx4	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr2_-_63184253_63184292	0.431675	Lhx4	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr4_-_19922599_19922614	0.420092	Lhx4	ENSMUST00000029900.5|Atp6v0d2|ENSMUSG00000028238.6|ATPase, H+ transporting, lysosomal V0 subunit D2
mm10_v2_chr7_-_102714411_102714411	0.417505	Lhx4	ENSMUST00000084817.2|Olfr33|ENSMUSG00000066273.5|olfactory receptor 33
mm10_v2_chr9_+_72958785_72958850	0.413267	Lhx4	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr17_-_36032682_36032855	0.410139	Lhx4	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr3_+_41742615_41742725	0.402402	Lhx4	ENSMUST00000146165.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000119572.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000108065.2|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000120167.1|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000026867.7|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed 	ENSMUST00000026868.7|D3Ertd751e|ENSMUSG00000025766.8|DNA segment, Chr 3, ERATO Doi 751, expressed
mm10_v2_chr18_-_66860458_66860485	0.388746	Lhx4	ENSMUST00000057942.2|Mc4r|ENSMUSG00000047259.2|melanocortin 4 receptor
mm10_v2_chr11_+_67798269_67798288	0.384658	Lhx4	ENSMUST00000168612.1|Dhrs7c|ENSMUSG00000033044.6|dehydrogenase/reductase (SDR family) member 7C 	ENSMUST00000040574.4|Dhrs7c|ENSMUSG00000033044.6|dehydrogenase/reductase (SDR family) member 7C
mm10_v2_chr6_+_29859662_29859685	0.383984	Lhx4	ENSMUST00000128927.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr9_-_96437434_96437434	0.381878	Lhx4	ENSMUST00000070500.2|BC043934|ENSMUSG00000056418.2|cDNA sequence BC043934
mm10_v2_chr14_+_27000362_27000507	0.379616	Lhx4	ENSMUST00000035433.8|Hesx1|ENSMUSG00000040726.8|homeobox gene expressed in ES cells
mm10_v2_chr3_-_85741389_85741389	0.378258	Lhx4	ENSMUST00000094148.4|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr4_+_145514884_145514884	0.369653	Lhx4	ENSMUST00000105741.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr2_+_23069210_23069327	0.36504	Lhx4	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr6_+_29859374_29859381	0.359585	Lhx4	ENSMUST00000115238.3|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr8_+_34807287_34807310	0.358327	Lhx4	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr10_+_75037066_75037100	0.355274	Lhx4	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr6_+_29859686_29859710	0.354976	Lhx4	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr10_-_64090265_64090297	0.348462	Lhx4	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr6_+_34780412_34780467	0.346078	Lhx4	ENSMUST00000115016.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3 	ENSMUST00000115017.1|Agbl3|ENSMUSG00000038836.9|ATP/GTP binding protein-like 3
mm10_v2_chr1_-_72284248_72284314	0.344618	Lhx4	ENSMUST00000097698.4|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase 	ENSMUST00000027381.6|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase
mm10_v2_chrX_-_139871637_139871677	0.344075	Lhx4	ENSMUST00000033811.7|Morc4|ENSMUSG00000031434.9|microrchidia 4 	ENSMUST00000087401.5|Morc4|ENSMUSG00000031434.9|microrchidia 4
mm10_v2_chr9_-_40962333_40962333	0.341738	Lhx4	ENSMUST00000160120.1|4931429I11Rik|ENSMUSG00000032023.7|RIKEN cDNA 4931429I11 gene
mm10_v2_chr10_+_116964707_116964745	0.341305	Lhx4	ENSMUST00000176050.1|D630029K05Rik|ENSMUSG00000031294.3|RIKEN cDNA D630029K05 gene 	ENSMUST00000176455.1|D630029K05Rik|ENSMUSG00000031294.3|RIKEN cDNA D630029K05 gene
mm10_v2_chr7_-_49636847_49636851	0.33838	Lhx4	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr15_+_25752860_25752979	0.33792	Lhx4	ENSMUST00000022882.5|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000135173.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr13_-_52530827_52530841	0.337432	Lhx4	ENSMUST00000057442.6|Diras2|ENSMUSG00000047842.6|DIRAS family, GTP-binding RAS-like 2
mm10_v2_chr4_+_145510759_145510791	0.336864	Lhx4	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr18_-_38866702_38866748	0.334987	Lhx4	ENSMUST00000115582.1|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr4_+_147553277_147553339	0.332738	Lhx4	ENSMUST00000139784.1|Gm13154|ENSMUSG00000065999.7|predicted gene 13154 	ENSMUST00000143885.1|Gm13154|ENSMUSG00000065999.7|predicted gene 13154 	ENSMUST00000081742.6|Gm13154|ENSMUSG00000065999.7|predicted gene 13154
mm10_v2_chr11_+_62847062_62847087	0.330994	Lhx4	ENSMUST00000036085.4|Fbxw10|ENSMUSG00000090173.2|F-box and WD-40 domain protein 10
mm10_v2_chr4_+_146097312_146097345	0.328079	Lhx4	ENSMUST00000105730.1|Gm13051|ENSMUSG00000066009.8|predicted gene 13051 	ENSMUST00000091878.5|Gm13051|ENSMUSG00000066009.8|predicted gene 13051
mm10_v2_chr14_+_80000292_80000309	0.323086	Lhx4	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr4_-_147809788_147809840	0.321302	Lhx4	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr5_+_29195983_29196032	0.316557	Lhx4	ENSMUST00000160888.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000159272.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000001247.5|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000161398.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32 	ENSMUST00000160246.1|Rnf32|ENSMUSG00000029130.6|ring finger protein 32
mm10_v2_chr4_+_146161909_146161909	0.315601	Lhx4	ENSMUST00000131932.1|Zfp600|ENSMUSG00000066007.9|zinc finger protein 600
mm10_v2_chr15_-_42676967_42676978	0.314548	Lhx4	ENSMUST00000022921.5|Angpt1|ENSMUSG00000022309.8|angiopoietin 1
mm10_v2_chr1_-_9298499_9298573	0.309756	Lhx4	ENSMUST00000132064.1|Sntg1|ENSMUSG00000025909.10|syntrophin, gamma 1
mm10_v2_chr5_-_62765618_62765656	0.302013	Lhx4	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr1_-_74885322_74885419	0.300024	Lhx4	ENSMUST00000159232.1|Fev|ENSMUSG00000055197.4|FEV (ETS oncogene family) 	ENSMUST00000068631.3|Fev|ENSMUSG00000055197.4|FEV (ETS oncogene family)
mm10_v2_chr6_-_129876659_129876677	0.298343	Lhx4	ENSMUST00000014687.4|Klra17|ENSMUSG00000014543.8|killer cell lectin-like receptor, subfamily A, member 17 	ENSMUST00000122219.1|Klra17|ENSMUSG00000014543.8|killer cell lectin-like receptor, subfamily A, member 17
mm10_v2_chr10_+_116966274_116966295	0.291601	Lhx4	ENSMUST00000033651.3|D630029K05Rik|ENSMUSG00000031294.3|RIKEN cDNA D630029K05 gene
mm10_v2_chr4_-_58499398_58499409	0.289988	Lhx4	ENSMUST00000107570.1|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1
mm10_v2_chr2_+_125136692_125136769	0.288636	Lhx4	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr17_-_34862473_34862535	0.286114	Lhx4	ENSMUST00000025229.4|Cfb|ENSMUSG00000090231.4|complement factor B 	ENSMUST00000176203.2|Cfb|ENSMUSG00000090231.4|complement factor B 	ENSMUST00000128767.1|Cfb|ENSMUSG00000090231.4|complement factor B
mm10_v2_chrX_-_143933204_143933311	0.2806	Lhx4	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr1_-_127840290_127840290	0.276493	Lhx4	ENSMUST00000061512.2|Map3k19|ENSMUSG00000051590.2|mitogen-activated protein kinase kinase kinase 19
mm10_v2_chr6_-_13871459_13871471	0.276384	Lhx4	ENSMUST00000155856.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr1_-_9299238_9299306	0.275881	Lhx4	ENSMUST00000140295.1|Sntg1|ENSMUSG00000025909.10|syntrophin, gamma 1
mm10_v2_chr17_-_34862122_34862238	0.275302	Lhx4	ENSMUST00000154526.1|Cfb|ENSMUSG00000090231.4|complement factor B
mm10_v2_chr2_+_83724397_83724555	0.274382	Lhx4	ENSMUST00000028499.4|Itgav|ENSMUSG00000027087.5|integrin alpha V 	ENSMUST00000141725.1|Itgav|ENSMUSG00000027087.5|integrin alpha V 	ENSMUST00000111740.2|Itgav|ENSMUSG00000027087.5|integrin alpha V
mm10_v2_chr17_-_67950908_67950983	0.271892	Lhx4	ENSMUST00000164647.1|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr6_-_128275577_128275577	0.271445	Lhx4	ENSMUST00000130454.1|Tead4|ENSMUSG00000030353.9|TEA domain family member 4
mm10_v2_chr4_+_145670685_145670685	0.2696	Lhx4	ENSMUST00000105738.2|Gm13242|ENSMUSG00000058186.7|predicted gene 13242
mm10_v2_chr6_-_29507946_29507974	0.269217	Lhx4	ENSMUST00000101614.3|Kcp|ENSMUSG00000059022.8|kielin/chordin-like protein 	ENSMUST00000078112.6|Kcp|ENSMUSG00000059022.8|kielin/chordin-like protein
mm10_v2_chr5_-_70842617_70842617	0.268454	Lhx4	ENSMUST00000031119.1|Gabrg1|ENSMUSG00000001260.6|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm10_v2_chr6_+_30611029_30611051	0.268175	Lhx4	ENSMUST00000115138.1|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr18_+_57468478_57468541	0.265894	Lhx4	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chr1_+_72284367_72284419	0.26429	Lhx4	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr16_-_22857514_22857576	0.261418	Lhx4	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chr6_+_30610984_30611026	0.261093	Lhx4	ENSMUST00000062758.4|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr16_-_64771146_64771184	0.259279	Lhx4	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr6_-_41377604_41377678	0.25859	Lhx4	ENSMUST00000096003.5|Prss3|ENSMUSG00000071519.5|protease, serine, 3
mm10_v2_chr9_+_119063429_119063467	0.252686	Lhx4	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chrX_-_143933089_143933142	0.247159	Lhx4	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr16_+_43235856_43235880	0.246431	Lhx4	ENSMUST00000146708.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr13_-_105271039_105271039	0.243525	Lhx4	ENSMUST00000069686.6|Rnf180|ENSMUSG00000021720.10|ring finger protein 180
mm10_v2_chr16_-_45844228_45844236	0.243418	Lhx4	ENSMUST00000076333.5|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr11_-_49113757_49113757	0.241522	Lhx4	ENSMUST00000060398.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr4_-_97778042_97778071	0.241314	Lhx4	ENSMUST00000146447.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr16_-_76022266_76022287	0.240455	Lhx4	ENSMUST00000114240.1|Samsn1|ENSMUSG00000022876.11|SAM domain, SH3 domain and nuclear localization signals, 1
mm10_v2_chr3_-_141982224_141982264	0.2377	Lhx4	ENSMUST00000029948.8|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr5_+_20702129_20702277	0.234908	Lhx4	ENSMUST00000101556.4|Magi2|ENSMUSG00000073174.4|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr5_+_9266097_9266202	0.232526	Lhx4	ENSMUST00000134991.1|9330182L06Rik|ENSMUSG00000056004.10|RIKEN cDNA 9330182L06 gene 	ENSMUST00000069538.7|9330182L06Rik|ENSMUSG00000056004.10|RIKEN cDNA 9330182L06 gene 	ENSMUST00000115348.2|9330182L06Rik|ENSMUSG00000056004.10|RIKEN cDNA 9330182L06 gene
mm10_v2_chr17_-_56036546_56036647	0.231544	Lhx4	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr4_+_65124174_65124174	0.230053	Lhx4	ENSMUST00000084501.3|Pappa|ENSMUSG00000028370.7|pregnancy-associated plasma protein A
mm10_v2_chr16_-_45844303_45844381	0.224459	Lhx4	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr6_-_41446062_41446097	0.223374	Lhx4	ENSMUST00000095999.5|Gm10334|ENSMUSG00000071517.5|predicted gene 10334
mm10_v2_chr16_+_48283735_48283735	0.222922	Lhx4	ENSMUST00000096045.1|Dppa4|ENSMUSG00000058550.8|developmental pluripotency associated 4 	ENSMUST00000050705.2|Dppa4|ENSMUSG00000058550.8|developmental pluripotency associated 4
mm10_v2_chr13_-_100446406_100446406	0.22214	Lhx4	ENSMUST00000022142.5|Naip1|ENSMUSG00000021640.5|NLR family, apoptosis inhibitory protein 1
mm10_v2_chr13_-_102906046_102906111	0.221926	Lhx4	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr2_-_170194033_170194064	0.219303	Lhx4	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr7_-_37772868_37772891	0.217316	Lhx4	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chrX_+_160768013_160768122	0.212157	Lhx4	ENSMUST00000033650.7|Rs1|ENSMUSG00000031293.7|retinoschisis (X-linked, juvenile) 1 (human)
mm10_v2_chr1_+_180111339_180111339	0.21064	Lhx4	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr13_-_102905740_102905814	0.209245	Lhx4	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr2_+_4300462_4300522	0.209115	Lhx4	ENSMUST00000175669.1|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr12_+_10390756_10390836	0.205483	Lhx4	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr17_-_46032366_46032383	0.204849	Lhx4	ENSMUST00000071648.5|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A 	ENSMUST00000142351.2|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A 	ENSMUST00000167860.1|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr7_-_37769624_37769677	0.204284	Lhx4	ENSMUST00000175941.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr4_-_35845204_35845204	0.20378	Lhx4	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr18_-_56975333_56975376	0.202599	Lhx4	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr14_-_48665098_48665246	0.198287	Lhx4	ENSMUST00000118578.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr3_-_116711820_116711847	0.196508	Lhx4	ENSMUST00000153108.1|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr17_-_46031813_46031863	0.19604	Lhx4	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr3_-_41742471_41742548	0.195181	Lhx4	ENSMUST00000026866.8|Sclt1|ENSMUSG00000059834.6|sodium channel and clathrin linker 1
mm10_v2_chr9_-_104337700_104337733	0.194094	Lhx4	ENSMUST00000112590.2|Acpp|ENSMUSG00000032561.8|acid phosphatase, prostate 	ENSMUST00000062723.6|Acpp|ENSMUSG00000032561.8|acid phosphatase, prostate
mm10_v2_chr10_-_24101951_24101951	0.192471	Lhx4	ENSMUST00000170267.1|Taar8c|ENSMUSG00000096204.1|trace amine-associated receptor 8C
mm10_v2_chr7_-_8931402_8931504	0.191868	Lhx4	ENSMUST00000169206.3|Vmn2r40|ENSMUSG00000090864.3|vomeronasal 2, receptor 40 	ENSMUST00000171942.2|Vmn2r40|ENSMUSG00000090864.3|vomeronasal 2, receptor 40
mm10_v2_chr1_+_177444653_177444669	0.190377	Lhx4	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr18_-_15403680_15403687	0.189819	Lhx4	ENSMUST00000079081.6|Aqp4|ENSMUSG00000024411.9|aquaporin 4
mm10_v2_chr5_+_19907502_19907551	0.189817	Lhx4	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr5_-_17888884_17888959	0.188158	Lhx4	ENSMUST00000169095.1|Cd36|ENSMUSG00000002944.9|CD36 antigen
mm10_v2_chr9_+_108339048_108339080	0.187973	Lhx4	ENSMUST00000082429.5|Gpx1|ENSMUSG00000063856.6|glutathione peroxidase 1
mm10_v2_chr3_+_135348029_135348085	0.185187	Lhx4	ENSMUST00000159658.1|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENSMUST00000078568.5|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENSMUST00000160460.1|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
mm10_v2_chr10_+_116143881_116143903	0.185002	Lhx4	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr7_+_30458280_30458315	0.180118	Lhx4	ENSMUST00000126297.1|Nphs1|ENSMUSG00000006649.10|nephrosis 1, nephrin
mm10_v2_chr14_+_26122609_26122609	0.178251	Lhx4	ENSMUST00000100810.6|Duxbl2|ENSMUSG00000072675.6|doubl homeobox B-like 2
mm10_v2_chr11_-_73326472_73326478	0.177713	Lhx4	ENSMUST00000155630.2|Aspa|ENSMUSG00000020774.3|aspartoacylase
mm10_v2_chr10_-_62507737_62507764	0.177545	Lhx4	ENSMUST00000020271.6|Srgn|ENSMUSG00000020077.8|serglycin
mm10_v2_chr16_-_16829276_16829349	0.17632	Lhx4	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr5_-_108795352_108795374	0.176317	Lhx4	ENSMUST00000004943.1|Tmed11|ENSMUSG00000004821.1|transmembrane emp24 protein transport domain containing
mm10_v2_chr7_-_5014645_5014697	0.172922	Lhx4	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr11_-_98329641_98329654	0.170779	Lhx4	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr3_+_142620596_142620627	0.170509	Lhx4	ENSMUST00000165774.1|Gbp2|ENSMUSG00000028270.6|guanylate binding protein 2
mm10_v2_chrX_-_75578188_75578247	0.168203	Lhx4	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr6_+_7555053_7555096	0.165485	Lhx4	ENSMUST00000090679.2|Tac1|ENSMUSG00000061762.6|tachykinin 1 	ENSMUST00000184986.1|Tac1|ENSMUSG00000061762.6|tachykinin 1
mm10_v2_chr17_-_78684262_78684352	0.16406	Lhx4	ENSMUST00000145480.1|Strn|ENSMUSG00000024077.9|striatin, calmodulin binding protein
mm10_v2_chr15_-_8710409_8710498	0.163296	Lhx4	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr10_+_102158858_102158889	0.159825	Lhx4	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr15_-_8710734_8710764	0.158497	Lhx4	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr8_-_106573461_106573462	0.158032	Lhx4	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr15_-_36879816_36879884	0.157428	Lhx4	ENSMUST00000100713.2|Gm10384|ENSMUSG00000072618.2|predicted gene 10384
mm10_v2_chr1_-_89933290_89933290	0.157308	Lhx4	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr2_-_7396192_7396241	0.157064	Lhx4	ENSMUST00000137733.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_-_33942111_33942151	0.151464	Lhx4	ENSMUST00000130988.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000127936.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000134271.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403
mm10_v2_chr15_-_93595877_93595909	0.148763	Lhx4	ENSMUST00000048982.4|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr16_+_11406618_11406675	0.148659	Lhx4	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr5_-_28210022_28210034	0.143394	Lhx4	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr16_-_74411292_74411430	0.141571	Lhx4	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr4_+_116596672_116596730	0.140687	Lhx4	ENSMUST00000051869.7|Ccdc17|ENSMUSG00000034035.12|coiled-coil domain containing 17
mm10_v2_chr1_-_93445642_93445686	0.140657	Lhx4	ENSMUST00000042498.7|Hdlbp|ENSMUSG00000034088.9|high density lipoprotein (HDL) binding protein
mm10_v2_chr18_+_55057557_55057585	0.139358	Lhx4	ENSMUST00000181765.1|Gm4221|ENSMUSG00000096948.1|predicted gene 4221
mm10_v2_chr2_-_63184170_63184195	0.138246	Lhx4	ENSMUST00000112452.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr1_+_88055377_88055449	0.13812	Lhx4	ENSMUST00000138182.1|Ugt1a10|ENSMUSG00000090165.2|UDP glycosyltransferase 1 family, polypeptide A10 	ENSMUST00000113142.3|Ugt1a10|ENSMUSG00000090165.2|UDP glycosyltransferase 1 family, polypeptide A10
mm10_v2_chr13_-_97747373_97747384	0.137264	Lhx4	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr2_-_7395879_7395912	0.136986	Lhx4	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr7_+_66839752_66839813	0.134018	Lhx4	ENSMUST00000107478.1|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr7_-_7689513_7689513	0.132561	Lhx4	ENSMUST00000173459.1|Vmn2r34|ENSMUSG00000070841.4|vomeronasal 2, receptor 34
mm10_v2_chr7_-_7902462_7902462	0.129828	Lhx4	ENSMUST00000170402.2|Vmn2r36|ENSMUSG00000091651.2|vomeronasal 2, receptor 36
mm10_v2_chr2_+_86007778_86007778	0.129719	Lhx4	ENSMUST00000062166.1|Olfr1032|ENSMUSG00000042796.1|olfactory receptor 1032
mm10_v2_chr5_+_19907774_19907861	0.128082	Lhx4	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr4_-_3938354_3938401	0.12696	Lhx4	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr10_+_23797052_23797200	0.126484	Lhx4	ENSMUST00000133289.1|Slc18b1|ENSMUSG00000037455.10|solute carrier family 18, subfamily B, member 1
mm10_v2_chr14_+_75455957_75455996	0.12438	Lhx4	ENSMUST00000164848.1|Siah3|ENSMUSG00000091722.1|seven in absentia homolog 3 (Drosophila)
mm10_v2_chr6_-_138079916_138079916	0.123463	Lhx4	ENSMUST00000171804.1|Slc15a5|ENSMUSG00000044378.6|solute carrier family 15, member 5
mm10_v2_chr4_+_97777780_97777834	0.122694	Lhx4	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr11_-_31671727_31671856	0.121429	Lhx4	ENSMUST00000109415.1|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr9_+_118478182_118478212	0.120579	Lhx4	ENSMUST00000111763.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr6_+_72097561_72097630	0.119207	Lhx4	ENSMUST00000069994.4|St3gal5|ENSMUSG00000056091.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 5 	ENSMUST00000114112.1|St3gal5|ENSMUSG00000056091.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm10_v2_chr13_+_120308146_120308146	0.11888	Lhx4	ENSMUST00000081558.7|BC147527|ENSMUSG00000094796.1|cDNA sequence BC147527
mm10_v2_chr1_-_133661318_133661386	0.117739	Lhx4	ENSMUST00000179598.1|Zbed6|ENSMUSG00000094410.1|zinc finger, BED domain containing 6 	ENSMUST00000027736.6|Zc3h11a|ENSMUSG00000026464.6|zinc finger CCCH type containing 11A
mm10_v2_chr16_-_29544852_29544869	0.116798	Lhx4	ENSMUST00000039090.8|Atp13a4|ENSMUSG00000038094.9|ATPase type 13A4
mm10_v2_chr1_+_88055467_88055481	0.116766	Lhx4	ENSMUST00000173325.1|Ugt1a10|ENSMUSG00000090165.2|UDP glycosyltransferase 1 family, polypeptide A10
mm10_v2_chr5_-_28210168_28210179	0.116106	Lhx4	ENSMUST00000117098.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr10_+_75566257_75566302	0.115769	Lhx4	ENSMUST00000129232.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1 	ENSMUST00000143792.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1
mm10_v2_chr11_+_60537978_60538074	0.113932	Lhx4	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr8_-_24725762_24725852	0.113156	Lhx4	ENSMUST00000171438.1|Adam3|ENSMUSG00000031553.9|a disintegrin and metallopeptidase domain 3 (cyritestin) 	ENSMUST00000171611.1|Adam3|ENSMUSG00000031553.9|a disintegrin and metallopeptidase domain 3 (cyritestin) 	ENSMUST00000033958.7|Adam3|ENSMUSG00000031553.9|a disintegrin and metallopeptidase domain 3 (cyritestin)
mm10_v2_chr10_+_75037291_75037332	0.111577	Lhx4	ENSMUST00000139384.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr2_-_155945282_155945367	0.111566	Lhx4	ENSMUST00000040162.2|Gdf5|ENSMUSG00000038259.4|growth differentiation factor 5
mm10_v2_chr1_-_22315792_22315815	0.111174	Lhx4	ENSMUST00000164877.1|Rims1|ENSMUSG00000041670.9|regulating synaptic membrane exocytosis 1
mm10_v2_chr12_+_30884321_30884326	0.10924	Lhx4	ENSMUST00000067087.6|Fam150b|ENSMUSG00000054204.6|family with sequence similarity 150, member B
mm10_v2_chr18_+_38296805_38296819	0.106635	Lhx4	ENSMUST00000171461.1|Rnf14|ENSMUSG00000060450.7|ring finger protein 14
mm10_v2_chr7_-_8489075_8489075	0.106469	Lhx4	ENSMUST00000164845.2|Vmn2r45|ENSMUSG00000090662.2|vomeronasal 2, receptor 45
mm10_v2_chr12_-_27342696_27342726	0.106012	Lhx4	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr8_+_34054622_34054647	0.104925	Lhx4	ENSMUST00000149618.1|Gm9951|ENSMUSG00000054618.8|predicted gene 9951
mm10_v2_chr11_-_106973090_106973117	0.104331	Lhx4	ENSMUST00000150366.1|Gm11707|ENSMUSG00000086481.1|predicted gene 11707
mm10_v2_chr9_+_120929216_120929251	0.103746	Lhx4	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr12_-_103694657_103694673	0.103496	Lhx4	ENSMUST00000117053.1|Serpina1f|ENSMUSG00000021081.6|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm10_v2_chr3_-_67515487_67515523	0.103358	Lhx4	ENSMUST00000178314.1|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1 	ENSMUST00000054825.4|Rarres1|ENSMUSG00000049404.5|retinoic acid receptor responder (tazarotene induced) 1
mm10_v2_chr1_+_106171752_106171879	0.102898	Lhx4	ENSMUST00000061047.6|Phlpp1|ENSMUSG00000044340.6|PH domain and leucine rich repeat protein phosphatase 1
mm10_v2_chr19_-_45235811_45235811	0.102152	Lhx4	ENSMUST00000099401.4|Lbx1|ENSMUSG00000025216.8|ladybird homeobox homolog 1 (Drosophila)
mm10_v2_chr1_-_82586781_82586849	0.101679	Lhx4	ENSMUST00000087050.5|Col4a4|ENSMUSG00000067158.8|collagen, type IV, alpha 4
mm10_v2_chr10_+_102159000_102159079	0.101359	Lhx4	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr2_+_132847719_132847743	0.101243	Lhx4	ENSMUST00000124836.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000154160.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chrX_+_9885622_9885622	0.101204	Lhx4	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr4_+_146514920_146514920	0.100554	Lhx4	ENSMUST00000140089.1|Gm13247|ENSMUSG00000056300.8|predicted gene 13247 	ENSMUST00000179175.1|Gm13247|ENSMUSG00000056300.8|predicted gene 13247
mm10_v2_chr9_-_15301555_15301607	0.0999272	Lhx4	ENSMUST00000034414.8|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chr17_+_34592248_34592329	0.0973082	Lhx4	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr11_+_76904513_76904569	0.09723	Lhx4	ENSMUST00000072633.3|Tmigd1|ENSMUSG00000020839.10|transmembrane and immunoglobulin domain containing 1
mm10_v2_chr13_+_20090500_20090518	0.0952909	Lhx4	ENSMUST00000165249.2|Elmo1|ENSMUSG00000041112.9|engulfment and cell motility 1
mm10_v2_chr11_+_96286623_96286653	0.0898894	Lhx4	ENSMUST00000049352.7|Hoxb7|ENSMUSG00000038721.8|homeobox B7
mm10_v2_chr4_+_15881255_15881272	0.085809	Lhx4	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr13_+_20090538_20090633	0.0845675	Lhx4	ENSMUST00000072519.5|Elmo1|ENSMUSG00000041112.9|engulfment and cell motility 1
mm10_v2_chr5_-_122821298_122821339	0.0819127	Lhx4	ENSMUST00000086216.4|Anapc5|ENSMUSG00000029472.9|anaphase-promoting complex subunit 5
mm10_v2_chr7_+_130774069_130774185	0.0809938	Lhx4	ENSMUST00000048453.5|Btbd16|ENSMUSG00000040298.5|BTB (POZ) domain containing 16
mm10_v2_chr6_+_124304646_124304671	0.0775761	Lhx4	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr7_+_23983961_23983961	0.0765368	Lhx4	ENSMUST00000077386.4|Vmn1r181|ENSMUSG00000057946.4|vomeronasal 1 receptor 181
mm10_v2_chr15_-_98220897_98220897	0.0762302	Lhx4	ENSMUST00000155603.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287
mm10_v2_chr4_+_146502027_146502027	0.0746781	Lhx4	ENSMUST00000105735.2|Gm13247|ENSMUSG00000056300.8|predicted gene 13247
mm10_v2_chr16_+_45224315_45224346	0.0731156	Lhx4	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr12_-_103694713_103694718	0.0729075	Lhx4	ENSMUST00000118101.1|Serpina1f|ENSMUSG00000021081.6|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm10_v2_chr3_+_89715016_89715084	0.0718407	Lhx4	ENSMUST00000098924.2|Adar|ENSMUSG00000027951.10|adenosine deaminase, RNA-specific
mm10_v2_chr11_-_89418948_89418948	0.0699759	Lhx4	ENSMUST00000050983.1|4932411E22Rik|ENSMUSG00000047490.1|RIKEN cDNA 4932411E22 gene
mm10_v2_chrX_-_134111708_134111788	0.0673635	Lhx4	ENSMUST00000159259.1|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1 	ENSMUST00000113275.3|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr7_+_126976338_126976400	0.0664598	Lhx4	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr9_+_124121534_124121584	0.0663975	Lhx4	ENSMUST00000111442.1|Ccr5|ENSMUSG00000079227.3|chemokine (C-C motif) receptor 5 	ENSMUST00000171499.2|Ccr5|ENSMUSG00000079227.3|chemokine (C-C motif) receptor 5
mm10_v2_chr3_+_102734496_102734530	0.0640976	Lhx4	ENSMUST00000029451.5|Tspan2|ENSMUSG00000027858.7|tetraspanin 2
mm10_v2_chr1_-_138175283_138175311	0.0638274	Lhx4	ENSMUST00000182755.1|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C 	ENSMUST00000183262.1|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C 	ENSMUST00000027645.7|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C 	ENSMUST00000112036.2|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C 	ENSMUST00000182283.1|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C
mm10_v2_chr6_+_37870786_37870882	0.0633938	Lhx4	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr1_-_138175126_138175198	0.0630138	Lhx4	ENSMUST00000183301.1|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C
mm10_v2_chr1_-_138175238_138175266	0.0607509	Lhx4	ENSMUST00000182536.1|Ptprc|ENSMUSG00000026395.10|protein tyrosine phosphatase, receptor type, C
mm10_v2_chr15_-_50889691_50889714	0.0604108	Lhx4	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr8_-_61902669_61902713	0.0603601	Lhx4	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr9_+_118478344_118478451	0.0594382	Lhx4	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr4_+_147492417_147492417	0.0582139	Lhx4	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr3_+_122419772_122419787	0.0579228	Lhx4	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr17_-_24073479_24073490	0.0565154	Lhx4	ENSMUST00000017090.5|Kctd5|ENSMUSG00000016946.5|potassium channel tetramerisation domain containing 5
mm10_v2_chr14_+_26693267_26693277	0.0533776	Lhx4	ENSMUST00000022433.4|Dnah12|ENSMUSG00000021879.6|dynein, axonemal, heavy chain 12
mm10_v2_chr6_-_136941887_136941911	0.0524785	Lhx4	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr2_-_112480817_112480817	0.0516601	Lhx4	ENSMUST00000099589.2|Chrm5|ENSMUSG00000074939.2|cholinergic receptor, muscarinic 5
mm10_v2_chr10_-_64090241_64090262	0.0488457	Lhx4	ENSMUST00000133588.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr1_+_167598384_167598411	0.0481062	Lhx4	ENSMUST00000015987.3|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr11_-_31671863_31671885	0.0477311	Lhx4	ENSMUST00000058060.7|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chr3_+_18054258_18054325	0.0473762	Lhx4	ENSMUST00000026120.6|Bhlhe22|ENSMUSG00000025128.6|basic helix-loop-helix family, member e22
mm10_v2_chr5_-_5266038_5266292	0.0473546	Lhx4	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr11_+_6560183_6560240	0.0465044	Lhx4	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chr4_-_82505274_82505358	0.0452584	Lhx4	ENSMUST00000050872.8|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000064770.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr1_-_13372434_13372457	0.0452062	Lhx4	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr7_+_66839726_66839750	0.044136	Lhx4	ENSMUST00000098382.3|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr11_-_65269941_65269954	0.0407246	Lhx4	ENSMUST00000102635.3|Myocd|ENSMUSG00000020542.12|myocardin
mm10_v2_chr2_+_61804453_61804538	0.0386772	Lhx4	ENSMUST00000048934.8|Tbr1|ENSMUSG00000035033.9|T-box brain gene 1
mm10_v2_chr12_+_24974914_24974948	0.0370587	Lhx4	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr3_-_66296807_66296837	0.0364506	Lhx4	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr7_+_16959714_16959800	0.0348716	Lhx4	ENSMUST00000038163.6|Pnmal1|ENSMUSG00000041141.6|PNMA-like 1
mm10_v2_chr5_-_118244861_118245116	0.0347137	Lhx4	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr15_-_98221056_98221056	0.034378	Lhx4	ENSMUST00000170618.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287 	ENSMUST00000141911.1|Olfr287|ENSMUSG00000090129.2|olfactory receptor 287
mm10_v2_chr1_+_153665587_153665595	0.0315601	Lhx4	ENSMUST00000147700.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr17_+_29274078_29274129	0.0312004	Lhx4	ENSMUST00000149405.2|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr7_-_7337493_7337531	0.0287387	Lhx4	ENSMUST00000072475.6|Vmn2r30|ENSMUSG00000070847.5|vomeronasal 2, receptor 30 	ENSMUST00000174368.1|Vmn2r30|ENSMUSG00000070847.5|vomeronasal 2, receptor 30
mm10_v2_chr6_-_30958990_30958990	0.0273375	Lhx4	ENSMUST00000101589.3|Klf14|ENSMUSG00000073209.3|Kruppel-like factor 14
mm10_v2_chr4_+_118961578_118961612	0.0264076	Lhx4	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr1_+_153665627_153665657	0.0244465	Lhx4	ENSMUST00000147482.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr10_-_40302186_40302206	0.0223884	Lhx4	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr1_-_172027251_172027268	0.0215543	Lhx4	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr2_-_7395968_7396011	0.0210837	Lhx4	ENSMUST00000002176.6|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr1_+_167598450_167598480	0.020413	Lhx4	ENSMUST00000111386.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma 	ENSMUST00000111384.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr13_-_95250166_95250336	0.0175692	Lhx4	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr2_-_134554348_134554369	0.0175515	Lhx4	ENSMUST00000028704.2|Hao1|ENSMUSG00000027261.2|hydroxyacid oxidase 1, liver
mm10_v2_chr5_-_3647806_3648009	0.0137479	Lhx4	ENSMUST00000119783.1|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1 	ENSMUST00000007559.8|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1
mm10_v2_chr8_-_64987646_64987646	0.0126679	Lhx4	ENSMUST00000095295.1|Trim75|ENSMUSG00000071089.2|tripartite motif-containing 75
mm10_v2_chr7_-_81493725_81493783	0.0119384	Lhx4	ENSMUST00000119121.1|Ap3b2|ENSMUSG00000062444.8|adaptor-related protein complex 3, beta 2 subunit
mm10_v2_chr16_-_56024628_56024668	0.0117403	Lhx4	ENSMUST00000119981.1|Pcnp|ENSMUSG00000071533.5|PEST proteolytic signal containing nuclear protein 	ENSMUST00000096021.3|Pcnp|ENSMUSG00000071533.5|PEST proteolytic signal containing nuclear protein
mm10_v2_chr1_-_168432270_168432347	0.0114844	Lhx4	ENSMUST00000072863.4|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr18_-_73754457_73754503	0.010749	Lhx4	ENSMUST00000041138.2|Elac1|ENSMUSG00000036941.2|elaC homolog 1 (E. coli)
mm10_v2_chrX_-_160906998_160907052	0.0102091	Lhx4	ENSMUST00000069417.5|Gja6|ENSMUSG00000055691.5|gap junction protein, alpha 6
mm10_v2_chr4_+_108719649_108719649	0.0088769	Lhx4	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr10_+_79996479_79996505	0.00681348	Lhx4	ENSMUST00000132517.1|Abca7|ENSMUSG00000035722.9|ATP-binding cassette, sub-family A (ABC1), member 7
mm10_v2_chr17_+_12378603_12378621	0.00589457	Lhx4	ENSMUST00000014578.5|Plg|ENSMUSG00000059481.4|plasminogen
mm10_v2_chr2_+_153161303_153161339	0.00580833	Lhx4	ENSMUST00000089027.2|Tm9sf4|ENSMUSG00000068040.4|transmembrane 9 superfamily protein member 4
mm10_v2_chr7_-_9223653_9223653	0.00395003	Lhx4	ENSMUST00000072787.4|Vmn2r37|ENSMUSG00000066828.5|vomeronasal 2, receptor 37
mm10_v2_chr2_-_32424005_32424029	0.00390556	Lhx4	ENSMUST00000113307.2|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm10_v2_chr3_+_32436376_32436376	0.00355533	Lhx4	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr2_-_164171113_164171113	0.00176413	Lhx4	ENSMUST00000045196.3|Kcns1|ENSMUSG00000040164.3|K+ voltage-gated channel, subfamily S, 1
mm10_v2_chr8_+_13869641_13869740	0.00118822	Lhx4	ENSMUST00000051870.7|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1 	ENSMUST00000128557.1|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1
mm10_v2_chrX_-_160138375_160138435	0.000287342	Lhx4	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
