mm10_v2_chrX_+_164438039_164438058	3.31185	Nkx3-1	ENSMUST00000033755.5|Asb11|ENSMUSG00000031382.8|ankyrin repeat and SOCS box-containing 11
mm10_v2_chr1_+_171155512_171155529	2.88714	Nkx3-1	ENSMUST00000111334.1|Mpz|ENSMUSG00000056569.4|myelin protein zero
mm10_v2_chr19_+_58759700_58759745	2.83283	Nkx3-1	ENSMUST00000026081.3|Pnliprp2|ENSMUSG00000025091.3|pancreatic lipase-related protein 2
mm10_v2_chr16_+_32756336_32756336	2.48067	Nkx3-1	ENSMUST00000135753.1|Muc4|ENSMUSG00000079620.7|mucin 4
mm10_v2_chr9_-_40962333_40962333	2.29502	Nkx3-1	ENSMUST00000160120.1|4931429I11Rik|ENSMUSG00000032023.7|RIKEN cDNA 4931429I11 gene
mm10_v2_chr14_+_41131777_41131794	2.25614	Nkx3-1	ENSMUST00000022314.3|Sftpa1|ENSMUSG00000021789.8|surfactant associated protein A1 	ENSMUST00000170719.1|Sftpa1|ENSMUSG00000021789.8|surfactant associated protein A1
mm10_v2_chr4_+_104766308_104766331	2.22212	Nkx3-1	ENSMUST00000031663.3|C8b|ENSMUSG00000029656.7|complement component 8, beta polypeptide
mm10_v2_chr10_-_115185015_115185029	2.08134	Nkx3-1	ENSMUST00000006949.8|Tph2|ENSMUSG00000006764.8|tryptophan hydroxylase 2
mm10_v2_chr4_+_110397764_110397808	2.02285	Nkx3-1	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr4_+_110397661_110397708	1.90794	Nkx3-1	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr9_-_62537036_62537061	1.89654	Nkx3-1	ENSMUST00000048043.5|Coro2b|ENSMUSG00000041729.9|coronin, actin binding protein, 2B
mm10_v2_chr6_+_78425973_78425985	1.84778	Nkx3-1	ENSMUST00000079926.5|Reg1|ENSMUSG00000059654.5|regenerating islet-derived 1
mm10_v2_chr1_-_52953179_52953350	1.65087	Nkx3-1	ENSMUST00000114492.1|1700019D03Rik|ENSMUSG00000043629.6|RIKEN cDNA 1700019D03 gene
mm10_v2_chr4_-_137409777_137409791	1.64896	Nkx3-1	ENSMUST00000024200.6|Gm13011|ENSMUSG00000078520.3|predicted gene 13011
mm10_v2_chr3_-_88027465_88027500	1.57072	Nkx3-1	ENSMUST00000005014.2|Hapln2|ENSMUSG00000004894.4|hyaluronan and proteoglycan link protein 2
mm10_v2_chr8_+_114133635_114133662	1.46621	Nkx3-1	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr3_-_113324052_113324052	1.42313	Nkx3-1	ENSMUST00000179314.1|Amy2a3|ENSMUSG00000093931.1|amylase 2a3
mm10_v2_chr10_+_69219357_69219385	1.41786	Nkx3-1	ENSMUST00000172261.1|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr8_+_114133557_114133597	1.4149	Nkx3-1	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr8_+_114133601_114133630	1.3237	Nkx3-1	ENSMUST00000109109.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr3_-_113532288_113532428	1.32163	Nkx3-1	ENSMUST00000132353.1|Amy2a1|ENSMUSG00000070360.5|amylase 2a1
mm10_v2_chr4_-_137430517_137430540	1.31687	Nkx3-1	ENSMUST00000102522.4|Cela3b|ENSMUSG00000023433.8|chymotrypsin-like elastase family, member 3B
mm10_v2_chr6_-_41035501_41035514	1.29228	Nkx3-1	ENSMUST00000031931.5|2210010C04Rik|ENSMUSG00000029882.5|RIKEN cDNA 2210010C04 gene
mm10_v2_chr18_-_6241470_6241482	1.27761	Nkx3-1	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr18_-_6241486_6241550	1.27368	Nkx3-1	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr12_-_78983476_78983493	1.27023	Nkx3-1	ENSMUST00000070174.7|Tmem229b|ENSMUSG00000046157.7|transmembrane protein 229B
mm10_v2_chr1_+_171503410_171503478	1.22842	Nkx3-1	ENSMUST00000081527.1|Alyref2|ENSMUSG00000060244.1|Aly/REF export factor 2
mm10_v2_chr5_+_90367204_90367204	1.18203	Nkx3-1	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr3_-_113291449_113291449	1.17719	Nkx3-1	ENSMUST00000179568.1|Amy2a4|ENSMUSG00000096770.1|amylase 2a4
mm10_v2_chr1_-_162866502_162866616	1.16972	Nkx3-1	ENSMUST00000046049.7|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr3_-_113356658_113356658	1.11428	Nkx3-1	ENSMUST00000098667.3|Amy2a2|ENSMUSG00000096569.1|amylase 2a2
mm10_v2_chr14_-_55788810_55788857	1.10838	Nkx3-1	ENSMUST00000022830.6|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000168716.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000178399.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3
mm10_v2_chr7_-_127930066_127930122	1.10732	Nkx3-1	ENSMUST00000032988.8|Prss8|ENSMUSG00000030800.9|protease, serine, 8 (prostasin)
mm10_v2_chr4_-_45530330_45530330	1.03674	Nkx3-1	ENSMUST00000061986.5|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr10_+_5639210_5639225	1.01311	Nkx3-1	ENSMUST00000019906.4|Vip|ENSMUSG00000019772.4|vasoactive intestinal polypeptide
mm10_v2_chr3_-_113258837_113258837	0.994965	Nkx3-1	ENSMUST00000098673.3|Amy2a5|ENSMUSG00000074268.3|amylase 2a5
mm10_v2_chr1_-_162478004_162478034	0.970296	Nkx3-1	ENSMUST00000086074.5|Dnm3|ENSMUSG00000040265.10|dynamin 3 	ENSMUST00000070330.7|Dnm3|ENSMUSG00000040265.10|dynamin 3
mm10_v2_chr5_+_66968416_66968447	0.970155	Nkx3-1	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr9_-_122310921_122310936	0.959804	Nkx3-1	ENSMUST00000180685.1|Gm26797|ENSMUSG00000097572.1|predicted gene, 26797
mm10_v2_chr12_+_59095653_59095799	0.941941	Nkx3-1	ENSMUST00000021384.4|Mia2|ENSMUSG00000035349.5|melanoma inhibitory activity 2
mm10_v2_chr11_-_103697661_103697718	0.901139	Nkx3-1	ENSMUST00000107013.2|Gosr2|ENSMUSG00000020946.7|golgi SNAP receptor complex member 2
mm10_v2_chr9_+_108049254_108049339	0.871109	Nkx3-1	ENSMUST00000112295.2|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B 	ENSMUST00000047947.7|Gmppb|ENSMUSG00000070284.4|GDP-mannose pyrophosphorylase B
mm10_v2_chr1_+_99772765_99772765	0.862648	Nkx3-1	ENSMUST00000086738.3|Cntnap5b|ENSMUSG00000067028.5|contactin associated protein-like 5B
mm10_v2_chr8_+_36457548_36457574	0.855672	Nkx3-1	ENSMUST00000135373.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene 	ENSMUST00000147525.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene
mm10_v2_chr10_-_41579207_41579207	0.837606	Nkx3-1	ENSMUST00000095227.3|Ccdc162|ENSMUSG00000075225.5|coiled-coil domain containing 162
mm10_v2_chr4_-_108217897_108218048	0.827785	Nkx3-1	ENSMUST00000106690.1|Zyg11a|ENSMUSG00000034645.7|zyg-11 family member A, cell cycle regulator 	ENSMUST00000043793.6|Zyg11a|ENSMUSG00000034645.7|zyg-11 family member A, cell cycle regulator
mm10_v2_chr17_-_79715034_79715047	0.822584	Nkx3-1	ENSMUST00000024894.1|Cyp1b1|ENSMUSG00000024087.3|cytochrome P450, family 1, subfamily b, polypeptide 1
mm10_v2_chr2_+_23069210_23069327	0.819101	Nkx3-1	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr4_-_140774196_140774236	0.800362	Nkx3-1	ENSMUST00000026381.6|Padi4|ENSMUSG00000025330.6|peptidyl arginine deiminase, type IV
mm10_v2_chr1_+_157506728_157506776	0.795042	Nkx3-1	ENSMUST00000086130.2|Sec16b|ENSMUSG00000026589.8|SEC16 homolog B (S. cerevisiae)
mm10_v2_chr1_+_157506777_157506811	0.781312	Nkx3-1	ENSMUST00000027881.8|Sec16b|ENSMUSG00000026589.8|SEC16 homolog B (S. cerevisiae)
mm10_v2_chr1_-_174921813_174921827	0.781083	Nkx3-1	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr19_+_5406815_5406880	0.74982	Nkx3-1	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr7_+_12834743_12834811	0.74733	Nkx3-1	ENSMUST00000004614.8|Zfp110|ENSMUSG00000058638.7|zinc finger protein 110
mm10_v2_chrX_-_101222426_101222563	0.745203	Nkx3-1	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr2_-_84715160_84715218	0.743241	Nkx3-1	ENSMUST00000035840.5|Zdhhc5|ENSMUSG00000034075.10|zinc finger, DHHC domain containing 5
mm10_v2_chr19_-_17356631_17356667	0.731424	Nkx3-1	ENSMUST00000174236.1|Gcnt1|ENSMUSG00000038843.11|glucosaminyl (N-acetyl) transferase 1, core 2
mm10_v2_chr5_+_28071356_28071372	0.73025	Nkx3-1	ENSMUST00000059155.10|Insig1|ENSMUSG00000045294.10|insulin induced gene 1
mm10_v2_chr8_+_47824459_47824482	0.694393	Nkx3-1	ENSMUST00000038693.6|Cldn22|ENSMUSG00000038064.6|claudin 22
mm10_v2_chr10_-_59441748_59441782	0.684853	Nkx3-1	ENSMUST00000009798.4|Oit3|ENSMUSG00000009654.4|oncoprotein induced transcript 3
mm10_v2_chr7_-_126922887_126922926	0.639179	Nkx3-1	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr2_+_62664279_62664300	0.621958	Nkx3-1	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr19_+_20601958_20601974	0.610038	Nkx3-1	ENSMUST00000087638.3|Aldh1a1|ENSMUSG00000053279.6|aldehyde dehydrogenase family 1, subfamily A1
mm10_v2_chr13_-_99900645_99900683	0.578674	Nkx3-1	ENSMUST00000022150.6|Cartpt|ENSMUSG00000021647.6|CART prepropeptide
mm10_v2_chr17_+_37270214_37270249	0.573997	Nkx3-1	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr5_-_110046486_110046486	0.567859	Nkx3-1	ENSMUST00000167969.1|Gm17655|ENSMUSG00000090963.1|predicted gene, 17655
mm10_v2_chr4_-_129378116_129378116	0.563414	Nkx3-1	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr12_+_52516077_52516077	0.547499	Nkx3-1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr1_-_156034800_156034817	0.547426	Nkx3-1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr7_-_121035096_121035096	0.545976	Nkx3-1	ENSMUST00000065740.2|Gm9905|ENSMUSG00000053358.2|predicted gene 9905
mm10_v2_chr5_+_8422831_8422906	0.54133	Nkx3-1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr19_+_4711153_4711258	0.534932	Nkx3-1	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr12_+_17266545_17266601	0.526809	Nkx3-1	ENSMUST00000057288.5|Pdia6|ENSMUSG00000020571.6|protein disulfide isomerase associated 6
mm10_v2_chr15_-_74997634_74997634	0.501502	Nkx3-1	ENSMUST00000023248.6|Ly6a|ENSMUSG00000075602.4|lymphocyte antigen 6 complex, locus A
mm10_v2_chr4_+_3940747_3940854	0.489444	Nkx3-1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr9_+_77921908_77921932	0.478844	Nkx3-1	ENSMUST00000133757.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr2_+_57997884_57997884	0.469515	Nkx3-1	ENSMUST00000112616.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 	ENSMUST00000166729.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
mm10_v2_chr3_-_102782708_102782715	0.465481	Nkx3-1	ENSMUST00000029450.3|Tshb|ENSMUSG00000027857.4|thyroid stimulating hormone, beta subunit 	ENSMUST00000172026.1|Tshb|ENSMUSG00000027857.4|thyroid stimulating hormone, beta subunit 	ENSMUST00000170856.1|Tshb|ENSMUSG00000027857.4|thyroid stimulating hormone, beta subunit
mm10_v2_chr9_+_78191966_78191999	0.461074	Nkx3-1	ENSMUST00000034903.5|Gsta4|ENSMUSG00000032348.5|glutathione S-transferase, alpha 4
mm10_v2_chr7_+_75455534_75455629	0.457299	Nkx3-1	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr2_+_23068168_23068241	0.454972	Nkx3-1	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chrX_-_100625901_100625954	0.442762	Nkx3-1	ENSMUST00000059099.6|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr4_-_121017201_121017261	0.441678	Nkx3-1	ENSMUST00000043200.7|Smap2|ENSMUSG00000032870.8|small ArfGAP 2
mm10_v2_chr1_-_130452416_130452530	0.439068	Nkx3-1	ENSMUST00000140400.1|Cd55|ENSMUSG00000026399.6|CD55 antigen
mm10_v2_chr8_+_71689214_71689258	0.437154	Nkx3-1	ENSMUST00000034261.7|Insl3|ENSMUSG00000079019.2|insulin-like 3
mm10_v2_chr12_-_87233556_87233556	0.432294	Nkx3-1	ENSMUST00000021423.7|Noxred1|ENSMUSG00000072919.3|NADP+ dependent oxidoreductase domain containing 1
mm10_v2_chr15_-_75111684_75111684	0.422958	Nkx3-1	ENSMUST00000100542.3|Ly6c2|ENSMUSG00000022584.8|lymphocyte antigen 6 complex, locus C2
mm10_v2_chr4_+_62619515_62619582	0.42146	Nkx3-1	ENSMUST00000084521.4|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3 	ENSMUST00000107424.1|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr7_+_139214661_139214681	0.419165	Nkx3-1	ENSMUST00000135509.1|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr15_-_75048837_75048837	0.405485	Nkx3-1	ENSMUST00000179762.1|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1 	ENSMUST00000065408.9|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1
mm10_v2_chrX_+_56454871_56454887	0.385438	Nkx3-1	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr14_-_54864055_54864158	0.381634	Nkx3-1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr2_-_93849679_93849836	0.376524	Nkx3-1	ENSMUST00000068513.4|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000041593.8|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000130077.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr14_+_79515618_79515694	0.367244	Nkx3-1	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr15_+_100422147_100422147	0.3555	Nkx3-1	ENSMUST00000132119.1|Gm5475|ENSMUSG00000087444.1|predicted gene 5475
mm10_v2_chr11_+_118443471_118443537	0.354511	Nkx3-1	ENSMUST00000133558.1|C1qtnf1|ENSMUSG00000017446.8|C1q and tumor necrosis factor related protein 1
mm10_v2_chr4_+_32623985_32624084	0.353323	Nkx3-1	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr17_+_84956718_84956745	0.334823	Nkx3-1	ENSMUST00000112305.3|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr9_+_89199319_89199379	0.334376	Nkx3-1	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr11_-_101278927_101279114	0.333089	Nkx3-1	ENSMUST00000168089.1|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3 	ENSMUST00000017332.3|Coa3|ENSMUSG00000017188.3|cytochrome C oxidase assembly factor 3
mm10_v2_chr17_-_56982120_56982161	0.326629	Nkx3-1	ENSMUST00000056113.4|Acer1|ENSMUSG00000045019.4|alkaline ceramidase 1
mm10_v2_chr5_+_72914264_72914304	0.325697	Nkx3-1	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr2_+_132846638_132846708	0.318835	Nkx3-1	ENSMUST00000028835.6|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000110122.3|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr3_-_64287417_64287495	0.316802	Nkx3-1	ENSMUST00000170244.1|Vmn2r3|ENSMUSG00000091572.2|vomeronasal 2, receptor 3 	ENSMUST00000176328.1|Vmn2r3|ENSMUSG00000091572.2|vomeronasal 2, receptor 3
mm10_v2_chr1_-_133907053_133907172	0.316683	Nkx3-1	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr14_+_61309753_61309813	0.306936	Nkx3-1	ENSMUST00000055159.7|Arl11|ENSMUSG00000043157.7|ADP-ribosylation factor-like 11
mm10_v2_chr10_-_14718191_14718228	0.306818	Nkx3-1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr6_+_58833689_58833734	0.30306	Nkx3-1	ENSMUST00000041401.8|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr9_+_58079358_58079385	0.293207	Nkx3-1	ENSMUST00000128021.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr10_-_13324160_13324242	0.290502	Nkx3-1	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr3_+_30792876_30792876	0.28713	Nkx3-1	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr18_+_75018709_75018816	0.286454	Nkx3-1	ENSMUST00000039608.7|Dym|ENSMUSG00000035765.9|dymeclin
mm10_v2_chr17_+_29268788_29268843	0.282277	Nkx3-1	ENSMUST00000064709.5|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004 	ENSMUST00000120346.1|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr16_-_48771956_48772030	0.281358	Nkx3-1	ENSMUST00000170861.1|Trat1|ENSMUSG00000030775.9|T cell receptor associated transmembrane adaptor 1
mm10_v2_chr2_+_25403044_25403115	0.279882	Nkx3-1	ENSMUST00000071442.5|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1
mm10_v2_chr7_-_25237849_25237856	0.279051	Nkx3-1	ENSMUST00000071739.5|Gsk3a|ENSMUSG00000057177.6|glycogen synthase kinase 3 alpha 	ENSMUST00000108411.1|Gsk3a|ENSMUSG00000057177.6|glycogen synthase kinase 3 alpha
mm10_v2_chr10_-_40142247_40142260	0.272629	Nkx3-1	ENSMUST00000092566.6|Slc16a10|ENSMUSG00000019838.10|solute carrier family 16 (monocarboxylic acid transporters), member 10
mm10_v2_chr10_-_13324250_13324318	0.267821	Nkx3-1	ENSMUST00000105543.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chrY_-_1459771_1459782	0.262629	Nkx3-1	ENSMUST00000091188.5|Usp9y|ENSMUSG00000069044.5|ubiquitin specific peptidase 9, Y chromosome
mm10_v2_chr2_+_25403128_25403200	0.256896	Nkx3-1	ENSMUST00000154809.1|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1 	ENSMUST00000055921.7|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1 	ENSMUST00000141567.1|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1
mm10_v2_chr11_-_21370452_21370485	0.256425	Nkx3-1	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr4_-_15149755_15149794	0.250562	Nkx3-1	ENSMUST00000108273.1|Necab1|ENSMUSG00000040536.9|N-terminal EF-hand calcium binding protein 1
mm10_v2_chrX_-_8206475_8206547	0.247974	Nkx3-1	ENSMUST00000089403.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000077595.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000089402.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000082320.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila)
mm10_v2_chr13_+_33084113_33084146	0.244057	Nkx3-1	ENSMUST00000016951.7|Serpinb1b|ENSMUSG00000051029.7|serine (or cysteine) peptidase inhibitor, clade B, member 1b
mm10_v2_chr6_+_18170782_18170824	0.243559	Nkx3-1	ENSMUST00000115406.1|Cftr|ENSMUSG00000041301.9|cystic fibrosis transmembrane conductance regulator
mm10_v2_chr13_+_23571382_23571396	0.242643	Nkx3-1	ENSMUST00000079251.5|Hist1h2bg|ENSMUSG00000058385.6|histone cluster 1, H2bg
mm10_v2_chr10_+_4432467_4432661	0.23868	Nkx3-1	ENSMUST00000095893.4|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000118544.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000117489.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene
mm10_v2_chr3_-_146781351_146781431	0.238459	Nkx3-1	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr3_-_146685592_146685592	0.238135	Nkx3-1	ENSMUST00000125965.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr1_+_40429563_40429586	0.234931	Nkx3-1	ENSMUST00000174335.1|Il1rl1|ENSMUSG00000026069.9|interleukin 1 receptor-like 1
mm10_v2_chr4_+_134397380_134397471	0.223935	Nkx3-1	ENSMUST00000105870.1|Pafah2|ENSMUSG00000037366.8|platelet-activating factor acetylhydrolase 2
mm10_v2_chr9_+_89199209_89199310	0.211191	Nkx3-1	ENSMUST00000068569.4|Bcl2a1b|ENSMUSG00000089929.1|B cell leukemia/lymphoma 2 related protein A1b
mm10_v2_chr7_+_100537192_100537232	0.210769	Nkx3-1	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr7_-_28598140_28598185	0.208918	Nkx3-1	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr7_+_123123870_123123901	0.204532	Nkx3-1	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr12_-_103694657_103694673	0.202151	Nkx3-1	ENSMUST00000117053.1|Serpina1f|ENSMUSG00000021081.6|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm10_v2_chr9_+_72438534_72438578	0.197456	Nkx3-1	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr8_+_106011491_106011526	0.194728	Nkx3-1	ENSMUST00000034375.4|Dus2l|ENSMUSG00000031901.6|dihydrouridine synthase 2-like (SMM1, S. cerevisiae) 	ENSMUST00000119736.1|Dus2l|ENSMUSG00000031901.6|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)
mm10_v2_chr19_+_43689672_43689695	0.19182	Nkx3-1	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr19_+_8819401_8819401	0.191584	Nkx3-1	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr2_-_84775420_84775444	0.184556	Nkx3-1	ENSMUST00000111641.1|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr14_-_46831984_46832057	0.184266	Nkx3-1	ENSMUST00000181311.1|Gm10101|ENSMUSG00000061510.3|predicted gene 10101 	ENSMUST00000074862.2|Gm10101|ENSMUSG00000061510.3|predicted gene 10101
mm10_v2_chr7_+_43607169_43607225	0.180248	Nkx3-1	ENSMUST00000120935.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000127765.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000032661.7|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819
mm10_v2_chr6_-_130231638_130231687	0.17764	Nkx3-1	ENSMUST00000088011.4|Klra7|ENSMUSG00000067599.7|killer cell lectin-like receptor, subfamily A, member 7 	ENSMUST00000112013.1|Klra7|ENSMUSG00000067599.7|killer cell lectin-like receptor, subfamily A, member 7 	ENSMUST00000049304.7|Klra7|ENSMUSG00000067599.7|killer cell lectin-like receptor, subfamily A, member 7
mm10_v2_chr9_+_18443456_18443456	0.177519	Nkx3-1	ENSMUST00000051008.8|Mbd3l2|ENSMUSG00000047508.8|methyl-CpG binding domain protein 3-like 2
mm10_v2_chr10_+_102159000_102159079	0.173051	Nkx3-1	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr5_-_129704259_129704259	0.170122	Nkx3-1	ENSMUST00000042266.6|Sept14|ENSMUSG00000034219.9|septin 14
mm10_v2_chr1_-_191164815_191164818	0.163703	Nkx3-1	ENSMUST00000171798.1|Fam71a|ENSMUSG00000091017.1|family with sequence similarity 71, member A
mm10_v2_chr5_-_72559599_72559691	0.16027	Nkx3-1	ENSMUST00000074948.4|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1 	ENSMUST00000087216.5|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1
mm10_v2_chr7_+_100537052_100537139	0.151499	Nkx3-1	ENSMUST00000054310.3|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr16_+_20535475_20535546	0.15132	Nkx3-1	ENSMUST00000090023.6|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit 	ENSMUST00000007216.8|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit
mm10_v2_chr11_-_61378306_61378347	0.146534	Nkx3-1	ENSMUST00000148671.1|Slc47a1|ENSMUSG00000010122.8|solute carrier family 47, member 1
mm10_v2_chr5_-_38491948_38491961	0.14648	Nkx3-1	ENSMUST00000129099.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr2_-_84775388_84775411	0.14457	Nkx3-1	ENSMUST00000023994.3|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr6_-_145434925_145434953	0.142238	Nkx3-1	ENSMUST00000111708.2|Ifltd1|ENSMUSG00000054966.7|intermediate filament tail domain containing 1
mm10_v2_chr7_+_5350542_5350542	0.140607	Nkx3-1	ENSMUST00000056639.6|Gm5065|ENSMUSG00000048398.6|predicted gene 5065
mm10_v2_chr10_-_60752773_60752820	0.13426	Nkx3-1	ENSMUST00000117513.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3 	ENSMUST00000119595.1|Slc29a3|ENSMUSG00000020100.9|solute carrier family 29 (nucleoside transporters), member 3
mm10_v2_chr8_-_106011422_106011486	0.132506	Nkx3-1	ENSMUST00000058579.5|Ddx28|ENSMUSG00000045538.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm10_v2_chr10_+_90576708_90576766	0.128085	Nkx3-1	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr10_-_128211788_128211823	0.1272	Nkx3-1	ENSMUST00000061995.8|Spryd4|ENSMUSG00000051346.8|SPRY domain containing 4
mm10_v2_chr12_-_103694713_103694718	0.12667	Nkx3-1	ENSMUST00000118101.1|Serpina1f|ENSMUSG00000021081.6|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm10_v2_chr6_-_130337502_130337574	0.123911	Nkx3-1	ENSMUST00000088017.4|Klra3|ENSMUSG00000067591.6|killer cell lectin-like receptor, subfamily A, member 3 	ENSMUST00000111998.2|Klra3|ENSMUSG00000067591.6|killer cell lectin-like receptor, subfamily A, member 3
mm10_v2_chr14_-_21748610_21748650	0.121766	Nkx3-1	ENSMUST00000075040.2|Dusp13|ENSMUSG00000021768.9|dual specificity phosphatase 13 	ENSMUST00000183943.1|Dusp13|ENSMUSG00000021768.9|dual specificity phosphatase 13
mm10_v2_chr9_+_58079310_58079356	0.121679	Nkx3-1	ENSMUST00000136154.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr1_-_133906973_133907014	0.116863	Nkx3-1	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr15_+_66670749_66670754	0.113531	Nkx3-1	ENSMUST00000065916.7|Tg|ENSMUSG00000053469.7|thyroglobulin
mm10_v2_chr5_+_142629537_142629593	0.113047	Nkx3-1	ENSMUST00000036872.9|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2 	ENSMUST00000110778.1|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2
mm10_v2_chr2_+_110597298_110597316	0.106872	Nkx3-1	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr13_-_41847599_41847625	0.106716	Nkx3-1	ENSMUST00000179758.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr10_-_62486575_62486604	0.103797	Nkx3-1	ENSMUST00000092473.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
mm10_v2_chr5_-_69592274_69592308	0.101721	Nkx3-1	ENSMUST00000174233.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000120789.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000166298.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr9_+_99470440_99470440	0.0997762	Nkx3-1	ENSMUST00000056103.4|1600029I14Rik|ENSMUSG00000046242.6|RIKEN cDNA 1600029I14 gene
mm10_v2_chr1_+_135133272_135133336	0.0942613	Nkx3-1	ENSMUST00000167080.1|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
mm10_v2_chr9_-_89092835_89092835	0.0922502	Nkx3-1	ENSMUST00000167113.1|Trim43b|ENSMUSG00000079162.2|tripartite motif-containing 43B
mm10_v2_chr11_-_83302586_83302637	0.0913777	Nkx3-1	ENSMUST00000176374.1|Pex12|ENSMUSG00000018733.4|peroxisomal biogenesis factor 12
mm10_v2_chr18_+_82910863_82910885	0.0866655	Nkx3-1	ENSMUST00000171238.1|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr10_+_90576777_90576815	0.0853362	Nkx3-1	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_+_69098937_69098985	0.081095	Nkx3-1	ENSMUST00000021271.7|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr17_-_78418083_78418131	0.078033	Nkx3-1	ENSMUST00000070039.7|Fez2|ENSMUSG00000056121.9|fasciculation and elongation protein zeta 2 (zygin II) 	ENSMUST00000112487.1|Fez2|ENSMUSG00000056121.9|fasciculation and elongation protein zeta 2 (zygin II)
mm10_v2_chr11_+_101279092_101279111	0.0777512	Nkx3-1	ENSMUST00000103107.4|Cntd1|ENSMUSG00000078653.4|cyclin N-terminal domain containing 1
mm10_v2_chr10_+_90576678_90576691	0.0758896	Nkx3-1	ENSMUST00000182284.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr1_-_193035651_193035728	0.0703282	Nkx3-1	ENSMUST00000016344.7|Syt14|ENSMUSG00000016200.8|synaptotagmin XIV
mm10_v2_chr17_-_47692466_47692466	0.0680649	Nkx3-1	ENSMUST00000113300.1|Prickle4|ENSMUSG00000096549.3|prickle homolog 4 (Drosophila)
mm10_v2_chr8_-_69791170_69791212	0.0675804	Nkx3-1	ENSMUST00000131784.1|Zfp866|ENSMUSG00000043090.12|zinc finger protein 866
mm10_v2_chr3_+_159599177_159599233	0.0671582	Nkx3-1	ENSMUST00000029824.8|Rpe65|ENSMUSG00000028174.8|retinal pigment epithelium 65
mm10_v2_chrX_+_7919816_7919905	0.0604367	Nkx3-1	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr17_-_65772686_65772752	0.058522	Nkx3-1	ENSMUST00000070673.7|Rab31|ENSMUSG00000056515.8|RAB31, member RAS oncogene family
mm10_v2_chr7_+_29768552_29768642	0.0488435	Nkx3-1	ENSMUST00000032802.4|Zfp84|ENSMUSG00000046185.10|zinc finger protein 84
mm10_v2_chr6_-_108185552_108185587	0.0486483	Nkx3-1	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr8_-_95807458_95807471	0.0444016	Nkx3-1	ENSMUST00000098473.4|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1 	ENSMUST00000068452.8|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1
mm10_v2_chr10_+_100488289_100488289	0.0389042	Nkx3-1	ENSMUST00000164751.1|Cep290|ENSMUSG00000019971.9|centrosomal protein 290
mm10_v2_chr10_+_90576872_90576992	0.0290953	Nkx3-1	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr5_-_145720124_145720136	0.0270976	Nkx3-1	ENSMUST00000094111.4|Cyp3a41a|ENSMUSG00000075551.3|cytochrome P450, family 3, subfamily a, polypeptide 41A
mm10_v2_chr13_-_41847482_41847490	0.0251855	Nkx3-1	ENSMUST00000072012.3|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr1_-_86111970_86111984	0.0216929	Nkx3-1	ENSMUST00000027431.6|Htr2b|ENSMUSG00000026228.6|5-hydroxytryptamine (serotonin) receptor 2B
mm10_v2_chr13_+_80886095_80886201	0.0161953	Nkx3-1	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr19_-_8405060_8405111	0.00986813	Nkx3-1	ENSMUST00000064507.5|Slc22a30|ENSMUSG00000052562.9|solute carrier family 22, member 30 	ENSMUST00000120540.1|Slc22a30|ENSMUSG00000052562.9|solute carrier family 22, member 30 	ENSMUST00000096269.4|Slc22a30|ENSMUSG00000052562.9|solute carrier family 22, member 30
mm10_v2_chr6_-_99632376_99632376	0.0055703	Nkx3-1	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
