mm10_v2_chr2_-_65238625_65238643	0.539645	Pax4	ENSMUST00000112429.2|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000102726.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000112430.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr2_-_65238573_65238609	0.525077	Pax4	ENSMUST00000090896.3|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000155082.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr19_-_6015152_6015247	0.461018	Pax4	ENSMUST00000025891.8|Capn1|ENSMUSG00000024942.10|calpain 1
mm10_v2_chr5_+_149006948_149006966	0.441835	Pax4	ENSMUST00000124198.1|Gm15408|ENSMUSG00000086610.1|predicted gene 15408
mm10_v2_chr19_-_6015769_6015830	0.425796	Pax4	ENSMUST00000164843.1|Capn1|ENSMUSG00000024942.10|calpain 1
mm10_v2_chrX_+_143518576_143518599	0.422606	Pax4	ENSMUST00000033640.7|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr13_+_75089826_75089886	0.410791	Pax4	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr7_+_78913401_78913428	0.392798	Pax4	ENSMUST00000118867.1|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chr2_+_105126505_105126529	0.381747	Pax4	ENSMUST00000143043.1|Wt1|ENSMUSG00000016458.7|Wilms tumor 1 homolog
mm10_v2_chr10_+_119992916_119992958	0.359823	Pax4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chrX_+_143518671_143518703	0.346609	Pax4	ENSMUST00000134402.1|Pak3|ENSMUSG00000031284.10|p21 protein (Cdc42/Rac)-activated kinase 3
mm10_v2_chr13_+_23738804_23738809	0.339229	Pax4	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr7_+_78913436_78913458	0.337442	Pax4	ENSMUST00000121645.1|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chr8_-_22476809_22476879	0.327762	Pax4	ENSMUST00000163774.1|Smim19|ENSMUSG00000031534.8|small integral membrane protein 19 	ENSMUST00000033935.8|Smim19|ENSMUSG00000031534.8|small integral membrane protein 19
mm10_v2_chr17_+_17402672_17402771	0.327452	Pax4	ENSMUST00000115576.2|Lix1|ENSMUSG00000047786.12|limb expression 1 homolog (chicken)
mm10_v2_chr5_-_116591811_116591830	0.293448	Pax4	ENSMUST00000076124.5|Srrm4|ENSMUSG00000063919.6|serine/arginine repetitive matrix 4
mm10_v2_chr1_-_156034800_156034817	0.292129	Pax4	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr7_+_78913765_78913791	0.278316	Pax4	ENSMUST00000038142.8|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chrX_-_73097017_73097095	0.273017	Pax4	ENSMUST00000114524.2|Xlr3a|ENSMUSG00000057836.6|X-linked lymphocyte-regulated 3A 	ENSMUST00000074619.5|Xlr3a|ENSMUSG00000057836.6|X-linked lymphocyte-regulated 3A
mm10_v2_chr18_-_22171392_22171423	0.265316	Pax4	ENSMUST00000025160.2|Ccdc178|ENSMUSG00000024306.6|coiled coil domain containing 178
mm10_v2_chr5_-_103100054_103100088	0.234785	Pax4	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr10_-_64090265_64090297	0.229268	Pax4	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chrX_+_73192222_73192222	0.225608	Pax4	ENSMUST00000101486.4|Xlr3b|ENSMUSG00000073125.4|X-linked lymphocyte-regulated 3B
mm10_v2_chrX_-_48877711_48877715	0.210152	Pax4	ENSMUST00000114928.1|Gm595|ENSMUSG00000079606.1|predicted gene 595
mm10_v2_chr3_+_20057802_20057857	0.197957	Pax4	ENSMUST00000002502.5|Hltf|ENSMUSG00000002428.6|helicase-like transcription factor
mm10_v2_chr4_+_150087365_150087541	0.191281	Pax4	ENSMUST00000094451.3|Gpr157|ENSMUSG00000047875.6|G protein-coupled receptor 157
mm10_v2_chr16_-_45844228_45844236	0.185799	Pax4	ENSMUST00000076333.5|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr16_-_45844303_45844381	0.17875	Pax4	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr2_-_168741898_168741973	0.178434	Pax4	ENSMUST00000109176.1|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A 	ENSMUST00000178504.1|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr5_+_135674572_135674592	0.16117	Pax4	ENSMUST00000153515.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chrX_-_9662950_9663003	0.155036	Pax4	ENSMUST00000033519.2|Dynlt3|ENSMUSG00000031176.2|dynein light chain Tctex-type 3
mm10_v2_chr1_+_88087802_88087848	0.150438	Pax4	ENSMUST00000113139.1|Ugt1a8|ENSMUSG00000089675.1|UDP glucuronosyltransferase 1 family, polypeptide A8
mm10_v2_chr19_+_3972322_3972345	0.147264	Pax4	ENSMUST00000143380.1|Aldh3b2|ENSMUSG00000075296.4|aldehyde dehydrogenase 3 family, member B2
mm10_v2_chr18_+_58836721_58836764	0.147202	Pax4	ENSMUST00000052907.5|Adamts19|ENSMUSG00000053441.4|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
mm10_v2_chr17_+_69383024_69383065	0.145635	Pax4	ENSMUST00000112674.1|Zbtb14|ENSMUSG00000049672.8|zinc finger and BTB domain containing 14
mm10_v2_chr2_+_43555321_43555338	0.143973	Pax4	ENSMUST00000028223.2|Kynu|ENSMUSG00000026866.10|kynureninase (L-kynurenine hydrolase)
mm10_v2_chrX_+_142227923_142227951	0.140255	Pax4	ENSMUST00000042329.5|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr10_+_127739516_127739592	0.1362	Pax4	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr13_-_101768154_101768217	0.136131	Pax4	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr15_+_80977765_80977845	0.135581	Pax4	ENSMUST00000139517.1|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3 	ENSMUST00000042506.8|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3 	ENSMUST00000137255.1|Sgsm3|ENSMUSG00000042303.10|small G protein signaling modulator 3
mm10_v2_chr17_-_23645264_23645309	0.133307	Pax4	ENSMUST00000024696.7|Mmp25|ENSMUSG00000023903.7|matrix metallopeptidase 25
mm10_v2_chr2_-_168741752_168741800	0.132698	Pax4	ENSMUST00000029060.4|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chrX_+_142228177_142228250	0.132345	Pax4	ENSMUST00000112914.1|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chrX_-_8206475_8206547	0.128613	Pax4	ENSMUST00000089403.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000077595.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000089402.3|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila) 	ENSMUST00000082320.5|Porcn|ENSMUSG00000031169.7|porcupine homolog (Drosophila)
mm10_v2_chr2_+_43555342_43555355	0.127281	Pax4	ENSMUST00000112826.1|Kynu|ENSMUSG00000026866.10|kynureninase (L-kynurenine hydrolase) 	ENSMUST00000050511.6|Kynu|ENSMUSG00000026866.10|kynureninase (L-kynurenine hydrolase)
mm10_v2_chr14_-_12823031_12823133	0.125412	Pax4	ENSMUST00000067491.6|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000177814.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112658.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112657.2|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator
mm10_v2_chr5_-_116288978_116288999	0.122547	Pax4	ENSMUST00000050178.6|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr4_-_58987095_58987119	0.12135	Pax4	ENSMUST00000030069.6|Ptgr1|ENSMUSG00000028378.6|prostaglandin reductase 1
mm10_v2_chr6_+_65590382_65590412	0.11819	Pax4	ENSMUST00000114236.1|Tnip3|ENSMUSG00000044162.10|TNFAIP3 interacting protein 3
mm10_v2_chr9_+_92275746_92275767	0.117988	Pax4	ENSMUST00000126911.1|Plscr2|ENSMUSG00000032372.8|phospholipid scramblase 2
mm10_v2_chr18_+_76930017_76930101	0.114514	Pax4	ENSMUST00000026487.4|Ier3ip1|ENSMUSG00000090000.1|immediate early response 3 interacting protein 1
mm10_v2_chr10_-_64090241_64090262	0.109766	Pax4	ENSMUST00000133588.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr16_+_15637844_15637889	0.109223	Pax4	ENSMUST00000023352.8|Prkdc|ENSMUSG00000022672.8|protein kinase, DNA activated, catalytic polypeptide
mm10_v2_chr2_+_105904629_105904685	0.103871	Pax4	ENSMUST00000037499.5|Immp1l|ENSMUSG00000042670.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
mm10_v2_chr12_+_33314375_33314408	0.101274	Pax4	ENSMUST00000155386.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chr9_-_58159201_58159239	0.0882863	Pax4	ENSMUST00000041477.7|Islr|ENSMUSG00000037206.8|immunoglobulin superfamily containing leucine-rich repeat
mm10_v2_chr9_-_101198999_101199080	0.0858185	Pax4	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr2_+_73271925_73271939	0.0838356	Pax4	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr5_-_116288944_116288977	0.0812092	Pax4	ENSMUST00000086483.3|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr15_-_88978958_88979007	0.0788267	Pax4	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr7_-_64925560_64925611	0.0786414	Pax4	ENSMUST00000149851.1|Fam189a1|ENSMUSG00000030518.11|family with sequence similarity 189, member A1
mm10_v2_chr3_-_59635733_59635733	0.0776593	Pax4	ENSMUST00000177879.1|Gm5709|ENSMUSG00000095128.1|predicted gene 5709
mm10_v2_chr7_-_104279732_104279732	0.0747749	Pax4	ENSMUST00000051795.9|Trim5|ENSMUSG00000060441.8|tripartite motif-containing 5
mm10_v2_chr4_+_136357423_136357541	0.073717	Pax4	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr7_-_45366714_45366840	0.0728218	Pax4	ENSMUST00000107779.1|Ppfia3|ENSMUSG00000003863.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm10_v2_chr9_+_58488568_58488603	0.0705245	Pax4	ENSMUST00000085658.4|6030419C18Rik|ENSMUSG00000066607.4|RIKEN cDNA 6030419C18 gene
mm10_v2_chr13_-_55528511_55528561	0.0672622	Pax4	ENSMUST00000047877.4|Dok3|ENSMUSG00000035711.4|docking protein 3
mm10_v2_chr15_-_50889691_50889714	0.0656325	Pax4	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr17_+_34238914_34238964	0.0642747	Pax4	ENSMUST00000167280.1|H2-Ob|ENSMUSG00000041538.9|histocompatibility 2, O region beta locus
mm10_v2_chr6_+_67115671_67115708	0.0634109	Pax4	ENSMUST00000181304.1|A430010J10Rik|ENSMUSG00000097603.1|RIKEN cDNA A430010J10 gene
mm10_v2_chr11_+_117484368_117484368	0.0548171	Pax4	ENSMUST00000092394.3|Gm11733|ENSMUSG00000069588.3|predicted gene 11733
mm10_v2_chrX_-_100594860_100594876	0.0526347	Pax4	ENSMUST00000053373.1|P2ry4|ENSMUSG00000044359.1|pyrimidinergic receptor P2Y, G-protein coupled, 4
mm10_v2_chr10_+_19935223_19935223	0.0508409	Pax4	ENSMUST00000129437.1|Map3k5|ENSMUSG00000071369.4|mitogen-activated protein kinase kinase kinase 5
mm10_v2_chr6_-_130337502_130337574	0.0462285	Pax4	ENSMUST00000088017.4|Klra3|ENSMUSG00000067591.6|killer cell lectin-like receptor, subfamily A, member 3 	ENSMUST00000111998.2|Klra3|ENSMUSG00000067591.6|killer cell lectin-like receptor, subfamily A, member 3
mm10_v2_chr19_-_11081088_11081111	0.0445233	Pax4	ENSMUST00000025636.6|Ms4a8a|ENSMUSG00000024730.6|membrane-spanning 4-domains, subfamily A, member 8A
mm10_v2_chrX_+_9199865_9199907	0.040391	Pax4	ENSMUST00000069763.2|Lancl3|ENSMUSG00000047344.9|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm10_v2_chr4_+_155831272_155831351	0.0400198	Pax4	ENSMUST00000139651.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000084097.5|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
mm10_v2_chr6_+_48613180_48613180	0.0368354	Pax4	ENSMUST00000061720.4|Zfp775|ENSMUSG00000007216.4|zinc finger protein 775
mm10_v2_chr2_-_131328982_131328989	0.0357547	Pax4	ENSMUST00000110194.1|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr19_+_53140430_53140449	0.0356537	Pax4	ENSMUST00000111741.2|Add3|ENSMUSG00000025026.8|adducin 3 (gamma)
mm10_v2_chr4_+_6365650_6365720	0.0349867	Pax4	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr12_-_90738438_90738438	0.0311721	Pax4	ENSMUST00000082432.3|Dio2|ENSMUSG00000007682.5|deiodinase, iodothyronine, type II
mm10_v2_chr15_-_50890041_50890064	0.0311644	Pax4	ENSMUST00000077935.5|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr15_-_89149557_89149650	0.0197009	Pax4	ENSMUST00000088823.3|Mapk11|ENSMUSG00000053137.6|mitogen-activated protein kinase 11
mm10_v2_chr17_+_34238896_34238911	0.0189662	Pax4	ENSMUST00000095342.3|H2-Ob|ENSMUSG00000041538.9|histocompatibility 2, O region beta locus
mm10_v2_chr7_+_7171330_7171373	0.0143809	Pax4	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr11_+_43587040_43587072	0.0138943	Pax4	ENSMUST00000056256.2|4933415A04Rik|ENSMUSG00000045877.2|RIKEN cDNA 4933415A04 gene
mm10_v2_chr12_+_71048338_71048356	0.0119221	Pax4	ENSMUST00000135709.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr10_-_67548944_67549001	0.0100216	Pax4	ENSMUST00000075686.4|Ado|ENSMUSG00000057134.4|2-aminoethanethiol (cysteamine) dioxygenase
mm10_v2_chr16_-_13730970_13730988	0.007395	Pax4	ENSMUST00000023364.6|Pla2g10|ENSMUSG00000022683.7|phospholipase A2, group X
mm10_v2_chr13_-_23430826_23431022	0.0040091	Pax4	ENSMUST00000153753.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene 	ENSMUST00000141543.1|C230035I16Rik|ENSMUSG00000085024.1|RIKEN cDNA C230035I16 gene
mm10_v2_chr6_+_113483297_113483316	0.00386333	Pax4	ENSMUST00000032422.5|Creld1|ENSMUSG00000030284.5|cysteine-rich with EGF-like domains 1
mm10_v2_chr4_+_155831630_155831698	0.00101949	Pax4	ENSMUST00000105592.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1 	ENSMUST00000105591.1|Aurkaip1|ENSMUSG00000065990.6|aurora kinase A interacting protein 1
