mm10_v2_chr9_-_31913462_31913483	1.16482	Pknox2_Pknox1	ENSMUST00000116615.3|Barx2|ENSMUSG00000032033.10|BarH-like homeobox 2
mm10_v2_chr1_-_87101590_87101617	0.498892	Pknox2_Pknox1	ENSMUST00000113270.2|Alpi|ENSMUSG00000079440.2|alkaline phosphatase, intestinal
mm10_v2_chr19_-_9899450_9899533	0.461691	Pknox2_Pknox1	ENSMUST00000025562.7|Incenp|ENSMUSG00000024660.8|inner centromere protein
mm10_v2_chr10_+_41810528_41810580	0.430867	Pknox2_Pknox1	ENSMUST00000099931.3|Sesn1|ENSMUSG00000038332.6|sestrin 1
mm10_v2_chr15_-_100599864_100599979	0.419135	Pknox2_Pknox1	ENSMUST00000177247.2|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1 	ENSMUST00000177505.2|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1
mm10_v2_chr1_+_87124946_87125008	0.397084	Pknox2_Pknox1	ENSMUST00000044878.3|Akp3|ENSMUSG00000036500.3|alkaline phosphatase 3, intestine, not Mn requiring
mm10_v2_chr2_-_34913976_34914043	0.369584	Pknox2_Pknox1	ENSMUST00000028232.3|Phf19|ENSMUSG00000026873.3|PHD finger protein 19
mm10_v2_chr2_+_162987502_162987509	0.361444	Pknox2_Pknox1	ENSMUST00000117123.1|Sgk2|ENSMUSG00000017868.10|serum/glucocorticoid regulated kinase 2
mm10_v2_chr2_+_162987330_162987436	0.335613	Pknox2_Pknox1	ENSMUST00000018012.7|Sgk2|ENSMUSG00000017868.10|serum/glucocorticoid regulated kinase 2
mm10_v2_chr17_-_70851710_70851738	0.333187	Pknox2_Pknox1	ENSMUST00000166395.2|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr1_-_52817503_52817583	0.304609	Pknox2_Pknox1	ENSMUST00000162576.1|Inpp1|ENSMUSG00000026102.3|inositol polyphosphate-1-phosphatase
mm10_v2_chr2_-_31141802_31142001	0.303918	Pknox2_Pknox1	ENSMUST00000073879.5|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000100208.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000100207.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000113555.1|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000075326.4|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000113552.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000136181.1|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1
mm10_v2_chr11_+_78826575_78826618	0.302316	Pknox2_Pknox1	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr7_-_131410325_131410378	0.299201	Pknox2_Pknox1	ENSMUST00000154602.1|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5
mm10_v2_chr17_-_70851189_70851216	0.265156	Pknox2_Pknox1	ENSMUST00000059775.8|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr2_-_31142002_31142017	0.254668	Pknox2_Pknox1	ENSMUST00000113560.1|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000113564.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000113562.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1
mm10_v2_chr5_-_100159261_100159314	0.254629	Pknox2_Pknox1	ENSMUST00000139520.1|Tmem150c|ENSMUSG00000050640.10|transmembrane protein 150C
mm10_v2_chr8_+_20136455_20136574	0.238449	Pknox2_Pknox1	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr7_-_48881032_48881050	0.22714	Pknox2_Pknox1	ENSMUST00000058745.8|E2f8|ENSMUSG00000046179.11|E2F transcription factor 8
mm10_v2_chr5_-_134747241_134747264	0.217927	Pknox2_Pknox1	ENSMUST00000015138.9|Eln|ENSMUSG00000029675.9|elastin
mm10_v2_chr14_+_55575617_55575660	0.212896	Pknox2_Pknox1	ENSMUST00000022826.5|Fitm1|ENSMUSG00000022215.5|fat storage-inducing transmembrane protein 1
mm10_v2_chr8_+_56294552_56294592	0.194484	Pknox2_Pknox1	ENSMUST00000034026.8|Hpgd|ENSMUSG00000031613.8|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm10_v2_chrX_+_49463926_49463973	0.191921	Pknox2_Pknox1	ENSMUST00000130558.1|Arhgap36|ENSMUSG00000036198.6|Rho GTPase activating protein 36
mm10_v2_chr8_-_111522073_111522112	0.18701	Pknox2_Pknox1	ENSMUST00000034437.6|Wdr59|ENSMUSG00000031959.8|WD repeat domain 59 	ENSMUST00000038193.7|Wdr59|ENSMUSG00000031959.8|WD repeat domain 59
mm10_v2_chr2_+_152911311_152911366	0.179446	Pknox2_Pknox1	ENSMUST00000028970.7|Mylk2|ENSMUSG00000027470.9|myosin, light polypeptide kinase 2, skeletal muscle
mm10_v2_chr9_+_44134562_44134670	0.1754	Pknox2_Pknox1	ENSMUST00000034650.8|Mcam|ENSMUSG00000032135.8|melanoma cell adhesion molecule 	ENSMUST00000098852.2|Mcam|ENSMUSG00000032135.8|melanoma cell adhesion molecule
mm10_v2_chr10_-_123196916_123196961	0.173007	Pknox2_Pknox1	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr10_-_41072279_41072290	0.157371	Pknox2_Pknox1	ENSMUST00000061796.6|Gpr6|ENSMUSG00000046922.6|G protein-coupled receptor 6
mm10_v2_chr4_+_11758147_11758220	0.1555	Pknox2_Pknox1	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr9_-_86880414_86880467	0.15223	Pknox2_Pknox1	ENSMUST00000074501.5|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000098495.3|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000074468.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000036347.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91
mm10_v2_chr3_-_51560816_51560878	0.15116	Pknox2_Pknox1	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chrX_+_13632769_13632798	0.149141	Pknox2_Pknox1	ENSMUST00000096492.3|Gpr34|ENSMUSG00000040229.5|G protein-coupled receptor 34
mm10_v2_chr2_-_113758638_113758655	0.142025	Pknox2_Pknox1	ENSMUST00000099575.3|Grem1|ENSMUSG00000074934.3|gremlin 1
mm10_v2_chr7_-_45434590_45434709	0.140021	Pknox2_Pknox1	ENSMUST00000107771.3|Ruvbl2|ENSMUSG00000003868.6|RuvB-like protein 2 	ENSMUST00000141761.1|Ruvbl2|ENSMUSG00000003868.6|RuvB-like protein 2
mm10_v2_chr11_+_117986292_117986292	0.138716	Pknox2_Pknox1	ENSMUST00000132676.1|Pgs1|ENSMUSG00000017715.5|phosphatidylglycerophosphate synthase 1
mm10_v2_chr1_+_25830657_25830657	0.137334	Pknox2_Pknox1	ENSMUST00000064487.1|Gm9884|ENSMUSG00000052558.1|predicted gene 9884
mm10_v2_chr7_-_131410495_131410521	0.135098	Pknox2_Pknox1	ENSMUST00000121033.1|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5 	ENSMUST00000046306.8|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5
mm10_v2_chr11_+_3202908_3203021	0.130288	Pknox2_Pknox1	ENSMUST00000179770.1|Eif4enif1|ENSMUSG00000020454.11|eukaryotic translation initiation factor 4E nuclear import factor 1 	ENSMUST00000110048.1|Eif4enif1|ENSMUSG00000020454.11|eukaryotic translation initiation factor 4E nuclear import factor 1
mm10_v2_chr19_+_10018265_10018276	0.119471	Pknox2_Pknox1	ENSMUST00000131407.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr7_+_89404356_89404367	0.112593	Pknox2_Pknox1	ENSMUST00000058755.3|Fzd4|ENSMUSG00000049791.3|frizzled homolog 4 (Drosophila)
mm10_v2_chr14_-_30923547_30923565	0.110845	Pknox2_Pknox1	ENSMUST00000170415.1|Itih3|ENSMUSG00000006522.9|inter-alpha trypsin inhibitor, heavy chain 3
mm10_v2_chr10_-_7792795_7792833	0.110394	Pknox2_Pknox1	ENSMUST00000065124.1|6530403G13Rik|ENSMUSG00000052979.1|RIKEN cDNA 6530403G13 gene
mm10_v2_chr11_+_23256001_23256105	0.104579	Pknox2_Pknox1	ENSMUST00000020538.6|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000109551.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102870.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102869.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast)
mm10_v2_chr6_-_106800051_106800095	0.103568	Pknox2_Pknox1	ENSMUST00000013882.7|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000049675.4|Crbn|ENSMUSG00000005362.8|cereblon 	ENSMUST00000113239.3|Crbn|ENSMUSG00000005362.8|cereblon
mm10_v2_chr7_-_48881596_48881619	0.101941	Pknox2_Pknox1	ENSMUST00000119223.1|E2f8|ENSMUSG00000046179.11|E2F transcription factor 8
mm10_v2_chr5_+_34761734_34761780	0.101858	Pknox2_Pknox1	ENSMUST00000080036.2|Htt|ENSMUSG00000029104.9|huntingtin
mm10_v2_chr5_+_150673739_150673827	0.100555	Pknox2_Pknox1	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr3_+_95232287_95232315	0.0999703	Pknox2_Pknox1	ENSMUST00000107200.1|Cdc42se1|ENSMUSG00000046722.8|CDC42 small effector 1 	ENSMUST00000107199.1|Cdc42se1|ENSMUSG00000046722.8|CDC42 small effector 1
mm10_v2_chr6_+_54039558_54039575	0.0981888	Pknox2_Pknox1	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chrX_-_48034842_48034858	0.0974867	Pknox2_Pknox1	ENSMUST00000039026.7|Apln|ENSMUSG00000037010.7|apelin
mm10_v2_chr15_+_59374198_59374279	0.0938598	Pknox2_Pknox1	ENSMUST00000079703.3|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae) 	ENSMUST00000168722.1|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae)
mm10_v2_chr5_+_138820080_138820080	0.0906035	Pknox2_Pknox1	ENSMUST00000179205.1|Gm5294|ENSMUSG00000094504.1|predicted gene 5294
mm10_v2_chr1_+_74588347_74588383	0.0882145	Pknox2_Pknox1	ENSMUST00000113732.1|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr9_-_122294361_122294407	0.0878054	Pknox2_Pknox1	ENSMUST00000042546.2|Ano10|ENSMUSG00000037949.7|anoctamin 10
mm10_v2_chr3_+_116594959_116595031	0.0867747	Pknox2_Pknox1	ENSMUST00000029571.8|Sass6|ENSMUSG00000027959.9|spindle assembly 6 homolog (C. elegans)
mm10_v2_chr1_-_179546261_179546276	0.0860792	Pknox2_Pknox1	ENSMUST00000027769.5|Tfb2m|ENSMUSG00000026492.5|transcription factor B2, mitochondrial
mm10_v2_chr7_-_127273919_127274036	0.0840953	Pknox2_Pknox1	ENSMUST00000082428.3|Sephs2|ENSMUSG00000049091.5|selenophosphate synthetase 2
mm10_v2_chr3_+_51415986_51416044	0.0824183	Pknox2_Pknox1	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr1_+_74236479_74236598	0.0823744	Pknox2_Pknox1	ENSMUST00000113820.2|Arpc2|ENSMUSG00000006304.8|actin related protein 2/3 complex, subunit 2 	ENSMUST00000006467.7|Arpc2|ENSMUSG00000006304.8|actin related protein 2/3 complex, subunit 2 	ENSMUST00000113819.1|Arpc2|ENSMUSG00000006304.8|actin related protein 2/3 complex, subunit 2
mm10_v2_chr13_-_12106945_12106984	0.0808352	Pknox2_Pknox1	ENSMUST00000021750.7|Ryr2|ENSMUSG00000021313.9|ryanodine receptor 2, cardiac 	ENSMUST00000170156.2|Ryr2|ENSMUSG00000021313.9|ryanodine receptor 2, cardiac
mm10_v2_chr7_+_112225856_112225900	0.0799923	Pknox2_Pknox1	ENSMUST00000050149.5|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106647.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENSMUST00000106648.1|Mical2|ENSMUSG00000038244.7|microtubule associated monooxygenase, calponin and LIM domain containing 2
mm10_v2_chr9_+_113930934_113930987	0.0787751	Pknox2_Pknox1	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr1_+_156558844_156559049	0.0767494	Pknox2_Pknox1	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr1_+_74588289_74588328	0.0765103	Pknox2_Pknox1	ENSMUST00000113733.3|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast) 	ENSMUST00000027358.4|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr11_-_80080928_80081001	0.0761699	Pknox2_Pknox1	ENSMUST00000103233.3|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3 	ENSMUST00000061283.8|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3
mm10_v2_chr13_+_109685994_109686156	0.0753755	Pknox2_Pknox1	ENSMUST00000074103.5|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr15_-_76723814_76723853	0.0710748	Pknox2_Pknox1	ENSMUST00000036247.8|C030006K11Rik|ENSMUSG00000079002.3|RIKEN cDNA C030006K11 gene
mm10_v2_chr7_-_126584578_126584627	0.0707181	Pknox2_Pknox1	ENSMUST00000150311.1|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr5_-_29478470_29478597	0.0703453	Pknox2_Pknox1	ENSMUST00000001608.7|Mnx1|ENSMUSG00000001566.8|motor neuron and pancreas homeobox 1 	ENSMUST00000165512.2|Mnx1|ENSMUSG00000001566.8|motor neuron and pancreas homeobox 1
mm10_v2_chr5_+_34989473_34989549	0.0687923	Pknox2_Pknox1	ENSMUST00000114284.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12 	ENSMUST00000114285.1|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr16_-_96127604_96127736	0.0662157	Pknox2_Pknox1	ENSMUST00000133885.1|Hmgn1|ENSMUSG00000040681.8|high mobility group nucleosomal binding domain 1 	ENSMUST00000050884.7|Hmgn1|ENSMUSG00000040681.8|high mobility group nucleosomal binding domain 1
mm10_v2_chr6_+_54039935_54040039	0.0660625	Pknox2_Pknox1	ENSMUST00000114403.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr11_-_49712674_49712726	0.0644816	Pknox2_Pknox1	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr13_+_91461050_91461125	0.0643071	Pknox2_Pknox1	ENSMUST00000004094.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2 	ENSMUST00000042122.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2
mm10_v2_chr3_+_85574109_85574148	0.0639252	Pknox2_Pknox1	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
mm10_v2_chr4_+_127021311_127021339	0.0621161	Pknox2_Pknox1	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr2_+_146855861_146855926	0.0615303	Pknox2_Pknox1	ENSMUST00000099278.2|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1 	ENSMUST00000156232.1|Plk1s1|ENSMUSG00000074749.4|polo-like kinase 1 substrate 1
mm10_v2_chr11_-_98022594_98022671	0.0581751	Pknox2_Pknox1	ENSMUST00000103144.3|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000017552.6|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000092736.4|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000107562.1|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr16_-_91069142_91069159	0.0573072	Pknox2_Pknox1	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr18_-_79109391_79109510	0.0544399	Pknox2_Pknox1	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr1_+_156558759_156558806	0.0538684	Pknox2_Pknox1	ENSMUST00000173929.1|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr9_-_62980874_62980902	0.0525488	Pknox2_Pknox1	ENSMUST00000098651.4|Pias1|ENSMUSG00000032405.9|protein inhibitor of activated STAT 1
mm10_v2_chr19_+_10018193_10018237	0.0524253	Pknox2_Pknox1	ENSMUST00000113161.2|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1 	ENSMUST00000117641.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr3_+_137864487_137864525	0.0494535	Pknox2_Pknox1	ENSMUST00000041045.7|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z
mm10_v2_chr9_-_29963112_29963141	0.0429315	Pknox2_Pknox1	ENSMUST00000075069.4|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr1_-_66945361_66945416	0.0397421	Pknox2_Pknox1	ENSMUST00000160100.1|Myl1|ENSMUSG00000061816.9|myosin, light polypeptide 1
mm10_v2_chr8_+_3655762_3655781	0.0379148	Pknox2_Pknox1	ENSMUST00000012849.8|Retn|ENSMUSG00000012705.10|resistin 	ENSMUST00000169234.2|Retn|ENSMUSG00000012705.10|resistin
mm10_v2_chr2_-_160872985_160873009	0.037797	Pknox2_Pknox1	ENSMUST00000109460.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3 	ENSMUST00000127201.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr10_-_29535857_29535880	0.0347302	Pknox2_Pknox1	ENSMUST00000092623.3|Rspo3|ENSMUSG00000019880.9|R-spondin 3 homolog (Xenopus laevis)
mm10_v2_chr8_-_69184177_69184240	0.0345372	Pknox2_Pknox1	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chr17_-_48432723_48432741	0.0321268	Pknox2_Pknox1	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr8_+_121544378_121544388	0.0310839	Pknox2_Pknox1	ENSMUST00000181133.1|1700030M09Rik|ENSMUSG00000097424.1|RIKEN cDNA 1700030M09 gene 	ENSMUST00000181679.1|1700030M09Rik|ENSMUSG00000097424.1|RIKEN cDNA 1700030M09 gene
mm10_v2_chr2_+_130012336_130012350	0.0291486	Pknox2_Pknox1	ENSMUST00000110299.2|Tgm3|ENSMUSG00000027401.9|transglutaminase 3, E polypeptide
mm10_v2_chr10_+_50592669_50592739	0.0290518	Pknox2_Pknox1	ENSMUST00000035606.8|Ascc3|ENSMUSG00000038774.8|activating signal cointegrator 1 complex subunit 3
mm10_v2_chr9_+_123366921_123366953	0.0286404	Pknox2_Pknox1	ENSMUST00000038863.7|Lars2|ENSMUSG00000035202.7|leucyl-tRNA synthetase, mitochondrial
mm10_v2_chr2_-_160872829_160872943	0.0281194	Pknox2_Pknox1	ENSMUST00000176141.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr4_+_141444654_141444714	0.0276136	Pknox2_Pknox1	ENSMUST00000006377.6|Zbtb17|ENSMUSG00000006215.6|zinc finger and BTB domain containing 17
mm10_v2_chr1_-_74588117_74588145	0.0273122	Pknox2_Pknox1	ENSMUST00000066986.6|Zfp142|ENSMUSG00000026135.11|zinc finger protein 142
mm10_v2_chr16_-_11909398_11909445	0.0254663	Pknox2_Pknox1	ENSMUST00000127972.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000121750.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000096272.4|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000073371.6|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1
mm10_v2_chr2_+_128967383_128967443	0.0232116	Pknox2_Pknox1	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr8_+_19682268_19682270	0.0220334	Pknox2_Pknox1	ENSMUST00000153710.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483 	ENSMUST00000127799.1|Gm6483|ENSMUSG00000087153.1|predicted gene 6483
mm10_v2_chr1_+_167618246_167618309	0.0207073	Pknox2_Pknox1	ENSMUST00000111380.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chrX_-_109013389_109013404	0.020191	Pknox2_Pknox1	ENSMUST00000033597.8|Hmgn5|ENSMUSG00000031245.8|high-mobility group nucleosome binding domain 5
mm10_v2_chr10_-_42276688_42276743	0.0190312	Pknox2_Pknox1	ENSMUST00000175881.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000056974.3|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr2_-_60673654_60673731	0.0188557	Pknox2_Pknox1	ENSMUST00000059888.8|Itgb6|ENSMUSG00000026971.9|integrin beta 6 	ENSMUST00000154764.1|Itgb6|ENSMUSG00000026971.9|integrin beta 6
mm10_v2_chr2_+_105682463_105682547	0.0176392	Pknox2_Pknox1	ENSMUST00000140173.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000135412.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000138365.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000145744.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr11_+_83964419_83964478	0.0157703	Pknox2_Pknox1	ENSMUST00000049714.8|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000092834.5|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183714.1|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183456.1|Synrg|ENSMUSG00000034940.9|synergin, gamma
mm10_v2_chr3_-_89402650_89402793	0.0152438	Pknox2_Pknox1	ENSMUST00000168325.1|Lenep|ENSMUSG00000078173.2|lens epithelial protein 	ENSMUST00000057431.5|Lenep|ENSMUSG00000078173.2|lens epithelial protein
mm10_v2_chr5_+_93268247_93268314	0.0138576	Pknox2_Pknox1	ENSMUST00000121127.1|Ccng2|ENSMUSG00000029385.8|cyclin G2
mm10_v2_chrX_-_102505359_102505412	0.0135672	Pknox2_Pknox1	ENSMUST00000087916.4|Hdac8|ENSMUSG00000067567.6|histone deacetylase 8
mm10_v2_chr15_-_59374149_59374199	0.0132525	Pknox2_Pknox1	ENSMUST00000022976.4|E430025E21Rik|ENSMUSG00000022350.6|RIKEN cDNA E430025E21 gene
mm10_v2_chr8_-_115707778_115707794	0.011619	Pknox2_Pknox1	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr11_-_46312220_46312358	0.0112438	Pknox2_Pknox1	ENSMUST00000129474.1|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2 	ENSMUST00000093166.4|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2 	ENSMUST00000165599.2|Cyfip2|ENSMUSG00000020340.10|cytoplasmic FMR1 interacting protein 2
mm10_v2_chr1_-_66945019_66945143	0.0111395	Pknox2_Pknox1	ENSMUST00000027151.5|Myl1|ENSMUSG00000061816.9|myosin, light polypeptide 1
mm10_v2_chr2_+_30416096_30416147	0.0101442	Pknox2_Pknox1	ENSMUST00000113601.3|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53) 	ENSMUST00000113603.3|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53)
mm10_v2_chr2_+_30416031_30416077	0.00996638	Pknox2_Pknox1	ENSMUST00000042055.3|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53)
mm10_v2_chr2_-_76982455_76982553	0.00994034	Pknox2_Pknox1	ENSMUST00000011934.5|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000099981.2|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000099980.3|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000111882.2|Ttn|ENSMUSG00000051747.8|titin 	ENSMUST00000140091.1|Ttn|ENSMUSG00000051747.8|titin
mm10_v2_chr10_-_42276744_42276763	0.00982966	Pknox2_Pknox1	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr13_+_63815240_63815379	0.00843617	Pknox2_Pknox1	ENSMUST00000021926.5|Ercc6l2|ENSMUSG00000021470.11|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 	ENSMUST00000095724.3|Ercc6l2|ENSMUSG00000021470.11|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 	ENSMUST00000143449.1|Ercc6l2|ENSMUSG00000021470.11|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 	ENSMUST00000067821.5|Ercc6l2|ENSMUSG00000021470.11|excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
mm10_v2_chr19_-_44069526_44069675	0.00789172	Pknox2_Pknox1	ENSMUST00000170801.1|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1
mm10_v2_chr1_+_58973521_58973582	0.00766478	Pknox2_Pknox1	ENSMUST00000114296.1|Stradb|ENSMUSG00000026027.7|STE20-related kinase adaptor beta 	ENSMUST00000027185.4|Stradb|ENSMUSG00000026027.7|STE20-related kinase adaptor beta
mm10_v2_chr17_-_35121173_35121197	0.0056681	Pknox2_Pknox1	ENSMUST00000174024.1|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr5_+_137553517_137553600	0.00425546	Pknox2_Pknox1	ENSMUST00000136088.1|Actl6b|ENSMUSG00000029712.8|actin-like 6B 	ENSMUST00000139395.1|Actl6b|ENSMUSG00000029712.8|actin-like 6B 	ENSMUST00000136565.1|Actl6b|ENSMUSG00000029712.8|actin-like 6B 	ENSMUST00000149292.1|Actl6b|ENSMUSG00000029712.8|actin-like 6B 	ENSMUST00000125489.1|Actl6b|ENSMUSG00000029712.8|actin-like 6B
mm10_v2_chr16_+_91391721_91391721	0.00374906	Pknox2_Pknox1	ENSMUST00000160764.1|Gm21970|ENSMUSG00000093701.1|predicted gene 21970
mm10_v2_chr17_-_35121030_35121078	0.00365094	Pknox2_Pknox1	ENSMUST00000174306.1|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr2_-_91649785_91649796	0.00238606	Pknox2_Pknox1	ENSMUST00000111333.1|Zfp408|ENSMUSG00000075040.3|zinc finger protein 408
mm10_v2_chr8_+_55940453_55940509	0.00177879	Pknox2_Pknox1	ENSMUST00000000275.7|Glra3|ENSMUSG00000038257.8|glycine receptor, alpha 3 subunit
mm10_v2_chr17_-_35121213_35121286	0.00132156	Pknox2_Pknox1	ENSMUST00000025246.6|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr16_+_55973881_55973892	0.00115975	Pknox2_Pknox1	ENSMUST00000050248.8|Rpl24|ENSMUSG00000022601.11|ribosomal protein L24
mm10_v2_chr5_-_100500592_100500657	0.00055573	Pknox2_Pknox1	ENSMUST00000149714.1|Lin54|ENSMUSG00000035310.9|lin-54 homolog (C. elegans) 	ENSMUST00000046154.5|Lin54|ENSMUSG00000035310.9|lin-54 homolog (C. elegans)
