mm10_v2_chr7_+_113207465_113207595	1.12064	Rorc_Nr1d1	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr5_+_64970069_64970089	0.778954	Rorc_Nr1d1	ENSMUST00000031080.8|Fam114a1|ENSMUSG00000029185.8|family with sequence similarity 114, member A1
mm10_v2_chr10_+_95417352_95417385	0.778787	Rorc_Nr1d1	ENSMUST00000181781.1|5730420D15Rik|ENSMUSG00000097766.1|RIKEN cDNA 5730420D15 gene
mm10_v2_chr2_+_90885860_90885872	0.655126	Rorc_Nr1d1	ENSMUST00000111466.2|C1qtnf4|ENSMUSG00000040794.5|C1q and tumor necrosis factor related protein 4
mm10_v2_chr9_-_45204083_45204106	0.475797	Rorc_Nr1d1	ENSMUST00000034599.8|Tmprss4|ENSMUSG00000032091.8|transmembrane protease, serine 4
mm10_v2_chr1_-_120505084_120505084	0.429508	Rorc_Nr1d1	ENSMUST00000027639.1|Marco|ENSMUSG00000026390.1|macrophage receptor with collagenous structure
mm10_v2_chr5_+_144190284_144190334	0.375446	Rorc_Nr1d1	ENSMUST00000060747.7|Bhlha15|ENSMUSG00000052271.7|basic helix-loop-helix family, member a15
mm10_v2_chr5_-_103629279_103629403	0.374627	Rorc_Nr1d1	ENSMUST00000031263.1|Slc10a6|ENSMUSG00000029321.1|solute carrier family 10 (sodium/bile acid cotransporter family), member 6
mm10_v2_chr17_+_24886643_24886765	0.363221	Rorc_Nr1d1	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr19_+_26623419_26623471	0.333939	Rorc_Nr1d1	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr3_+_79884576_79884597	0.322891	Rorc_Nr1d1	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr7_-_45615484_45615490	0.317201	Rorc_Nr1d1	ENSMUST00000033099.4|Fgf21|ENSMUSG00000030827.4|fibroblast growth factor 21
mm10_v2_chr10_+_73821857_73821883	0.300556	Rorc_Nr1d1	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chrX_+_103422010_103422010	0.298684	Rorc_Nr1d1	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr17_-_46032366_46032383	0.275506	Rorc_Nr1d1	ENSMUST00000071648.5|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A 	ENSMUST00000142351.2|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A 	ENSMUST00000167860.1|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr9_-_75441652_75441652	0.267045	Rorc_Nr1d1	ENSMUST00000181896.1|A130057D12Rik|ENSMUSG00000097298.1|RIKEN cDNA A130057D12 gene
mm10_v2_chr14_+_118787894_118787942	0.265552	Rorc_Nr1d1	ENSMUST00000047761.6|Cldn10|ENSMUSG00000022132.9|claudin 10 	ENSMUST00000071546.7|Cldn10|ENSMUSG00000022132.9|claudin 10
mm10_v2_chr8_-_107065632_107065650	0.259087	Rorc_Nr1d1	ENSMUST00000034393.5|Tmed6|ENSMUSG00000031919.5|transmembrane emp24 protein transport domain containing 6
mm10_v2_chr10_-_81291227_81291282	0.254431	Rorc_Nr1d1	ENSMUST00000045744.6|Tjp3|ENSMUSG00000034917.7|tight junction protein 3
mm10_v2_chr4_+_62480025_62480098	0.24177	Rorc_Nr1d1	ENSMUST00000030088.5|Bspry|ENSMUSG00000028392.9|B-box and SPRY domain containing 	ENSMUST00000107449.3|Bspry|ENSMUSG00000028392.9|B-box and SPRY domain containing
mm10_v2_chr9_-_101034892_101034904	0.232505	Rorc_Nr1d1	ENSMUST00000035116.5|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide
mm10_v2_chrX_-_143933089_143933142	0.225079	Rorc_Nr1d1	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr10_+_39612934_39612934	0.224461	Rorc_Nr1d1	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr17_-_46031813_46031863	0.217343	Rorc_Nr1d1	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr9_-_101034857_101034877	0.21694	Rorc_Nr1d1	ENSMUST00000142676.1|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide 	ENSMUST00000149322.1|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide
mm10_v2_chr11_+_96931387_96931516	0.216683	Rorc_Nr1d1	ENSMUST00000107633.1|Prr15l|ENSMUSG00000047040.9|proline rich 15-like
mm10_v2_chr1_-_162478004_162478034	0.214922	Rorc_Nr1d1	ENSMUST00000086074.5|Dnm3|ENSMUSG00000040265.10|dynamin 3 	ENSMUST00000070330.7|Dnm3|ENSMUSG00000040265.10|dynamin 3
mm10_v2_chr3_-_89393629_89393684	0.204365	Rorc_Nr1d1	ENSMUST00000124783.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B 	ENSMUST00000126027.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr4_-_33189410_33189455	0.203158	Rorc_Nr1d1	ENSMUST00000098181.2|Pm20d2|ENSMUSG00000054659.7|peptidase M20 domain containing 2
mm10_v2_chr3_-_144819494_144819494	0.202588	Rorc_Nr1d1	ENSMUST00000029929.7|Clca2|ENSMUSG00000028262.9|chloride channel calcium activated 2
mm10_v2_chr9_+_46012810_46012821	0.201657	Rorc_Nr1d1	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr7_-_126625676_126625676	0.194663	Rorc_Nr1d1	ENSMUST00000032961.3|Nupr1|ENSMUSG00000030717.3|nuclear protein transcription regulator 1
mm10_v2_chrX_-_143933204_143933311	0.193859	Rorc_Nr1d1	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr10_-_128401218_128401234	0.191298	Rorc_Nr1d1	ENSMUST00000042666.5|Slc39a5|ENSMUSG00000039878.6|solute carrier family 39 (metal ion transporter), member 5
mm10_v2_chr10_+_73821937_73821951	0.188993	Rorc_Nr1d1	ENSMUST00000134009.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125006.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177420.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr4_+_54945038_54945082	0.187244	Rorc_Nr1d1	ENSMUST00000133895.1|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr13_-_52981027_52981083	0.168684	Rorc_Nr1d1	ENSMUST00000071065.7|Nfil3|ENSMUSG00000056749.7|nuclear factor, interleukin 3, regulated
mm10_v2_chrX_-_136203637_136203926	0.162091	Rorc_Nr1d1	ENSMUST00000151592.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000131510.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000066819.4|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5
mm10_v2_chr3_+_55140033_55140055	0.156433	Rorc_Nr1d1	ENSMUST00000118963.2|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000061099.7|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000153009.1|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169
mm10_v2_chr15_-_5108492_5108565	0.154119	Rorc_Nr1d1	ENSMUST00000118365.2|Card6|ENSMUSG00000041849.7|caspase recruitment domain family, member 6
mm10_v2_chr2_+_61593125_61593175	0.149998	Rorc_Nr1d1	ENSMUST00000112494.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr17_+_37046555_37046600	0.149384	Rorc_Nr1d1	ENSMUST00000172789.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr5_-_123141067_123141094	0.148917	Rorc_Nr1d1	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr11_+_94328242_94328261	0.144552	Rorc_Nr1d1	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr15_-_5108469_5108490	0.144024	Rorc_Nr1d1	ENSMUST00000141020.1|Card6|ENSMUSG00000041849.7|caspase recruitment domain family, member 6
mm10_v2_chr19_+_22448242_22448283	0.139964	Rorc_Nr1d1	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr2_+_61593077_61593102	0.135723	Rorc_Nr1d1	ENSMUST00000112495.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator 	ENSMUST00000112501.2|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr7_+_45705088_45705292	0.135112	Rorc_Nr1d1	ENSMUST00000080885.3|Dbp|ENSMUSG00000059824.4|D site albumin promoter binding protein
mm10_v2_chr7_-_126922887_126922926	0.134715	Rorc_Nr1d1	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chrX_+_7607099_7607129	0.130873	Rorc_Nr1d1	ENSMUST00000115726.2|Cacna1f|ENSMUSG00000031142.11|calcium channel, voltage-dependent, alpha 1F subunit 	ENSMUST00000133637.1|Cacna1f|ENSMUSG00000031142.11|calcium channel, voltage-dependent, alpha 1F subunit 	ENSMUST00000115725.2|Cacna1f|ENSMUSG00000031142.11|calcium channel, voltage-dependent, alpha 1F subunit
mm10_v2_chr3_-_89764581_89764646	0.130187	Rorc_Nr1d1	ENSMUST00000029562.3|Chrnb2|ENSMUSG00000027950.3|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm10_v2_chr11_-_100527896_100528000	0.129162	Rorc_Nr1d1	ENSMUST00000107389.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase 	ENSMUST00000007131.9|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr7_-_109731708_109731732	0.128993	Rorc_Nr1d1	ENSMUST00000035372.1|Ascl3|ENSMUSG00000035951.1|achaete-scute complex homolog 3 (Drosophila)
mm10_v2_chr11_+_120673359_120673404	0.124867	Rorc_Nr1d1	ENSMUST00000135346.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000127269.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000131727.2|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000149389.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000153346.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr3_+_90603767_90603771	0.124455	Rorc_Nr1d1	ENSMUST00000001046.5|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4 	ENSMUST00000107330.1|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4
mm10_v2_chr6_+_134830145_134830179	0.122454	Rorc_Nr1d1	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr15_-_50882806_50882822	0.12066	Rorc_Nr1d1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr7_+_28693997_28694019	0.119891	Rorc_Nr1d1	ENSMUST00000108280.1|Fbxo27|ENSMUSG00000037463.8|F-box protein 27
mm10_v2_chr7_-_142661305_142661314	0.118353	Rorc_Nr1d1	ENSMUST00000105936.1|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr5_-_122779278_122779434	0.117526	Rorc_Nr1d1	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr2_-_60881360_60881491	0.113074	Rorc_Nr1d1	ENSMUST00000164147.1|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1 	ENSMUST00000112509.1|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr3_-_84304762_84304809	0.112719	Rorc_Nr1d1	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr6_+_61180313_61180400	0.111765	Rorc_Nr1d1	ENSMUST00000126214.1|Ccser1|ENSMUSG00000039578.10|coiled-coil serine rich 1
mm10_v2_chr7_-_122021143_122021222	0.110988	Rorc_Nr1d1	ENSMUST00000033160.8|Gga2|ENSMUSG00000030872.8|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm10_v2_chr8_+_119862239_119862305	0.107664	Rorc_Nr1d1	ENSMUST00000034287.8|Klhl36|ENSMUSG00000031828.8|kelch-like 36
mm10_v2_chr15_+_102270540_102270580	0.105589	Rorc_Nr1d1	ENSMUST00000181801.1|Gm9918|ENSMUSG00000097050.1|predicted gene 9918
mm10_v2_chr7_-_134232125_134232146	0.0942476	Rorc_Nr1d1	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr11_+_102885160_102885174	0.0922523	Rorc_Nr1d1	ENSMUST00000100369.3|Fam187a|ENSMUSG00000075510.3|family with sequence similarity 187, member A
mm10_v2_chr8_+_3665747_3665763	0.091756	Rorc_Nr1d1	ENSMUST00000014118.2|1810033B17Rik|ENSMUSG00000013974.2|RIKEN cDNA 1810033B17 gene
mm10_v2_chr14_-_60197173_60197185	0.0906398	Rorc_Nr1d1	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr17_-_37280418_37280418	0.0881909	Rorc_Nr1d1	ENSMUST00000077585.2|Olfr99|ENSMUSG00000061972.2|olfactory receptor 99
mm10_v2_chr14_-_55524938_55524967	0.0880235	Rorc_Nr1d1	ENSMUST00000178694.1|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr14_-_55524975_55524985	0.087126	Rorc_Nr1d1	ENSMUST00000062232.7|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr11_-_100527862_100527878	0.0850862	Rorc_Nr1d1	ENSMUST00000107385.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr2_-_167833642_167833648	0.0833199	Rorc_Nr1d1	ENSMUST00000143649.1|1200007C13Rik|ENSMUSG00000087684.1|RIKEN cDNA 1200007C13 gene
mm10_v2_chr11_+_94327984_94328029	0.0826619	Rorc_Nr1d1	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr11_+_81860679_81860679	0.0801159	Rorc_Nr1d1	ENSMUST00000021044.3|5530401A14Rik|ENSMUSG00000020703.3|RIKEN cDNA 5530401A14 gene
mm10_v2_chr7_-_142176001_142176007	0.0791441	Rorc_Nr1d1	ENSMUST00000067978.5|Krtap5-2|ENSMUSG00000054759.5|keratin associated protein 5-2
mm10_v2_chr4_+_3940747_3940854	0.0778763	Rorc_Nr1d1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr5_+_64803513_64803530	0.0743533	Rorc_Nr1d1	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr2_-_91710519_91710582	0.0742012	Rorc_Nr1d1	ENSMUST00000028678.8|Atg13|ENSMUSG00000027244.8|autophagy related 13 	ENSMUST00000076803.5|Atg13|ENSMUSG00000027244.8|autophagy related 13
mm10_v2_chr6_-_93913678_93913719	0.0737925	Rorc_Nr1d1	ENSMUST00000093769.5|Magi1|ENSMUSG00000045095.10|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm10_v2_chr9_+_75441518_75441575	0.0686457	Rorc_Nr1d1	ENSMUST00000048937.4|Leo1|ENSMUSG00000042487.5|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr4_+_98546919_98546973	0.0686317	Rorc_Nr1d1	ENSMUST00000030290.7|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr11_+_88718442_88718645	0.0651934	Rorc_Nr1d1	ENSMUST00000138007.1|C030037D09Rik|ENSMUSG00000087574.1|RIKEN cDNA C030037D09 gene
mm10_v2_chrX_+_42151002_42151019	0.0602906	Rorc_Nr1d1	ENSMUST00000123245.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr8_+_94472763_94472763	0.0589139	Rorc_Nr1d1	ENSMUST00000053085.5|Nlrc5|ENSMUSG00000074151.6|NLR family, CARD domain containing 5
mm10_v2_chr16_-_44558879_44558905	0.0581617	Rorc_Nr1d1	ENSMUST00000114634.1|Boc|ENSMUSG00000022687.5|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm10_v2_chr7_-_67803489_67803532	0.0567595	Rorc_Nr1d1	ENSMUST00000181235.1|4833412C05Rik|ENSMUSG00000097697.1|RIKEN cDNA 4833412C05 gene
mm10_v2_chr2_+_57997884_57997884	0.0547033	Rorc_Nr1d1	ENSMUST00000112616.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 	ENSMUST00000166729.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
mm10_v2_chr11_-_51635870_51635896	0.0544908	Rorc_Nr1d1	ENSMUST00000001081.3|Rmnd5b|ENSMUSG00000001054.3|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm10_v2_chr11_+_95712673_95712673	0.0526405	Rorc_Nr1d1	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr6_-_29380513_29380520	0.0495988	Rorc_Nr1d1	ENSMUST00000080428.6|Opn1sw|ENSMUSG00000058831.7|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm10_v2_chr4_+_94739276_94739300	0.0463025	Rorc_Nr1d1	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr11_-_116198701_116198836	0.0458005	Rorc_Nr1d1	ENSMUST00000072948.4|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr14_+_105258712_105258758	0.0450773	Rorc_Nr1d1	ENSMUST00000138283.1|Ndfip2|ENSMUSG00000053253.10|Nedd4 family interacting protein 2
mm10_v2_chr10_-_61476937_61476937	0.0429473	Rorc_Nr1d1	ENSMUST00000051330.4|D830039M14Rik|ENSMUSG00000043126.4|RIKEN cDNA D830039M14 gene
mm10_v2_chr17_-_51810866_51810919	0.0428255	Rorc_Nr1d1	ENSMUST00000176669.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr2_+_158502612_158502632	0.0427057	Rorc_Nr1d1	ENSMUST00000059889.3|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr11_-_51688614_51688669	0.0426873	Rorc_Nr1d1	ENSMUST00000007921.2|0610009B22Rik|ENSMUSG00000007777.3|RIKEN cDNA 0610009B22 gene
mm10_v2_chr11_+_98348404_98348434	0.0418079	Rorc_Nr1d1	ENSMUST00000078694.6|Ppp1r1b|ENSMUSG00000061718.6|protein phosphatase 1, regulatory (inhibitor) subunit 1B
mm10_v2_chr14_-_54864055_54864158	0.0415995	Rorc_Nr1d1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr6_-_29380426_29380435	0.04104	Rorc_Nr1d1	ENSMUST00000147483.2|Opn1sw|ENSMUSG00000058831.7|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm10_v2_chr11_-_98329641_98329654	0.0405557	Rorc_Nr1d1	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr13_+_52596847_52596858	0.0381778	Rorc_Nr1d1	ENSMUST00000055087.6|Syk|ENSMUSG00000021457.8|spleen tyrosine kinase
mm10_v2_chr2_+_4389614_4389639	0.0381158	Rorc_Nr1d1	ENSMUST00000115037.2|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr9_+_54863742_54863801	0.0378713	Rorc_Nr1d1	ENSMUST00000034843.7|Ireb2|ENSMUSG00000032293.7|iron responsive element binding protein 2
mm10_v2_chr1_+_23761749_23761759	0.0371656	Rorc_Nr1d1	ENSMUST00000144602.1|B3gat2|ENSMUSG00000026156.8|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm10_v2_chr6_-_128275577_128275577	0.0364059	Rorc_Nr1d1	ENSMUST00000130454.1|Tead4|ENSMUSG00000030353.9|TEA domain family member 4
mm10_v2_chr6_+_29361410_29361461	0.0361131	Rorc_Nr1d1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr2_-_170427828_170427852	0.0360617	Rorc_Nr1d1	ENSMUST00000013667.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000109152.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000068137.4|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr3_-_53463234_53463306	0.0356495	Rorc_Nr1d1	ENSMUST00000056749.7|Nhlrc3|ENSMUSG00000042997.7|NHL repeat containing 3
mm10_v2_chr12_-_84876479_84876532	0.035161	Rorc_Nr1d1	ENSMUST00000163189.1|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000110254.2|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000002073.6|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2
mm10_v2_chr5_+_88487982_88487982	0.0349857	Rorc_Nr1d1	ENSMUST00000031222.8|Enam|ENSMUSG00000029286.8|enamelin
mm10_v2_chr9_-_30922452_30922567	0.0338505	Rorc_Nr1d1	ENSMUST00000065112.6|Adamts15|ENSMUSG00000033453.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm10_v2_chr15_+_58415456_58415512	0.0318612	Rorc_Nr1d1	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr7_+_127296369_127296410	0.0313639	Rorc_Nr1d1	ENSMUST00000170971.1|Itgal|ENSMUSG00000030830.12|integrin alpha L
mm10_v2_chr2_+_48949495_48949522	0.0304537	Rorc_Nr1d1	ENSMUST00000112745.1|Mbd5|ENSMUSG00000036792.6|methyl-CpG binding domain protein 5
mm10_v2_chr11_-_59290746_59290758	0.0246491	Rorc_Nr1d1	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chr11_-_116199040_116199090	0.0177451	Rorc_Nr1d1	ENSMUST00000066587.5|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr5_+_145084100_145084109	0.0171596	Rorc_Nr1d1	ENSMUST00000124379.1|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr8_-_79248537_79248583	0.0154719	Rorc_Nr1d1	ENSMUST00000034109.4|1700011L22Rik|ENSMUSG00000031682.4|RIKEN cDNA 1700011L22 gene
mm10_v2_chr2_+_158502633_158502698	0.0148941	Rorc_Nr1d1	ENSMUST00000109484.1|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr7_-_79386943_79387027	0.0137858	Rorc_Nr1d1	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr11_+_70030023_70030083	0.0123866	Rorc_Nr1d1	ENSMUST00000143920.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr11_+_66956620_66956667	0.0107932	Rorc_Nr1d1	ENSMUST00000150220.1|9130409J20Rik|ENSMUSG00000085683.1|RIKEN cDNA 9130409J20 gene
mm10_v2_chr14_-_54577578_54577661	0.00887154	Rorc_Nr1d1	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr15_-_98662858_98662911	0.00796675	Rorc_Nr1d1	ENSMUST00000162384.1|Ddx23|ENSMUSG00000003360.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 	ENSMUST00000003450.8|Ddx23|ENSMUSG00000003360.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
mm10_v2_chr7_+_127211608_127211711	0.00738328	Rorc_Nr1d1	ENSMUST00000032910.6|Mylpf|ENSMUSG00000030672.6|myosin light chain, phosphorylatable, fast skeletal muscle
mm10_v2_chr5_+_144100387_144100436	0.00731029	Rorc_Nr1d1	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr5_+_145083830_145083887	0.00709005	Rorc_Nr1d1	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr3_-_153944425_153944452	0.00574006	Rorc_Nr1d1	ENSMUST00000150070.1|Acadm|ENSMUSG00000062908.6|acyl-Coenzyme A dehydrogenase, medium chain
mm10_v2_chr17_+_33638056_33638110	0.00449704	Rorc_Nr1d1	ENSMUST00000052079.7|Pram1|ENSMUSG00000032739.10|PML-RAR alpha-regulated adaptor molecule 1
mm10_v2_chr13_-_8871696_8871749	0.00446928	Rorc_Nr1d1	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr14_-_36935560_36935578	0.00431855	Rorc_Nr1d1	ENSMUST00000183038.1|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr1_-_172590463_172590568	0.00370782	Rorc_Nr1d1	ENSMUST00000065679.6|Slamf8|ENSMUSG00000053318.6|SLAM family member 8
mm10_v2_chr4_-_83052147_83052185	0.00322231	Rorc_Nr1d1	ENSMUST00000170248.2|Frem1|ENSMUSG00000059049.8|Fras1 related extracellular matrix protein 1
mm10_v2_chr2_-_76870486_76870611	0.00281795	Rorc_Nr1d1	ENSMUST00000138542.1|Ttn|ENSMUSG00000051747.8|titin
mm10_v2_chr19_-_47692042_47692094	0.00279095	Rorc_Nr1d1	ENSMUST00000026045.7|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1 	ENSMUST00000086923.5|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1
mm10_v2_chr15_-_81871883_81871916	0.00118473	Rorc_Nr1d1	ENSMUST00000023117.8|Phf5a|ENSMUSG00000061360.7|PHD finger protein 5A
mm10_v2_chr5_-_145008028_145008028	3.1297e-05	Rorc_Nr1d1	ENSMUST00000116454.3|Kpna7|ENSMUSG00000038770.11|karyopherin alpha 7 (importin alpha 8)
