mm10_v2_chr13_-_23551648_23551672	0.927367	Runx3	ENSMUST00000102971.1|Hist1h4f|ENSMUSG00000069274.3|histone cluster 1, H4f
mm10_v2_chr7_-_44974781_44974851	0.79644	Runx3	ENSMUST00000063761.7|Cpt1c|ENSMUSG00000007783.9|carnitine palmitoyltransferase 1c
mm10_v2_chr5_+_21424934_21425013	0.619726	Runx3	ENSMUST00000056045.4|Fam185a|ENSMUSG00000047221.5|family with sequence similarity 185, member A
mm10_v2_chr10_-_81001338_81001378	0.543926	Runx3	ENSMUST00000099462.1|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7 	ENSMUST00000118233.1|Gng7|ENSMUSG00000048240.8|guanine nucleotide binding protein (G protein), gamma 7
mm10_v2_chr13_-_22041352_22041363	0.538496	Runx3	ENSMUST00000102977.2|Hist1h4i|ENSMUSG00000060639.4|histone cluster 1, H4i
mm10_v2_chr6_-_100671126_100671178	0.525689	Runx3	ENSMUST00000089245.6|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000113312.2|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000170667.1|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae)
mm10_v2_chr18_-_47368446_47368486	0.523347	Runx3	ENSMUST00000076043.6|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000135790.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr13_+_51645232_51645276	0.465427	Runx3	ENSMUST00000075853.5|Cks2|ENSMUSG00000062248.5|CDC28 protein kinase regulatory subunit 2
mm10_v2_chr17_+_28328471_28328570	0.441391	Runx3	ENSMUST00000042334.8|Rpl10a|ENSMUSG00000037805.8|ribosomal protein L10A
mm10_v2_chr13_-_23698454_23698460	0.433298	Runx3	ENSMUST00000102967.1|Hist1h4c|ENSMUSG00000060678.4|histone cluster 1, H4c
mm10_v2_chr7_-_141437587_141437650	0.433183	Runx3	ENSMUST00000172654.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106006.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr4_-_120570252_120570299	0.418397	Runx3	ENSMUST00000030381.7|Ctps|ENSMUSG00000028633.7|cytidine 5'-triphosphate synthase
mm10_v2_chr13_-_21832194_21832198	0.409049	Runx3	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr17_+_27556668_27556690	0.399507	Runx3	ENSMUST00000117254.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000118570.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr17_+_27556641_27556658	0.394669	Runx3	ENSMUST00000119486.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000118599.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr17_+_27556613_27556635	0.380457	Runx3	ENSMUST00000117600.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000114888.3|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr8_+_4243264_4243387	0.379717	Runx3	ENSMUST00000110996.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr2_+_72476159_72476212	0.368448	Runx3	ENSMUST00000102691.4|Cdca7|ENSMUSG00000055612.9|cell division cycle associated 7
mm10_v2_chr5_+_121397936_121398004	0.323682	Runx3	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr7_-_142095266_142095306	0.305521	Runx3	ENSMUST00000039926.3|Dusp8|ENSMUSG00000037887.5|dual specificity phosphatase 8
mm10_v2_chr11_-_5878207_5878292	0.302786	Runx3	ENSMUST00000102922.3|Pold2|ENSMUSG00000020471.5|polymerase (DNA directed), delta 2, regulatory subunit
mm10_v2_chr9_+_106429537_106429548	0.302418	Runx3	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr10_-_62602261_62602298	0.281829	Runx3	ENSMUST00000045866.7|Ddx21|ENSMUSG00000020075.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
mm10_v2_chr9_+_106429399_106429457	0.274649	Runx3	ENSMUST00000150576.1|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chrX_-_147554050_147554087	0.264509	Runx3	ENSMUST00000112819.2|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2 	ENSMUST00000136789.1|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2
mm10_v2_chr17_-_6961156_6961156	0.244058	Runx3	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr9_+_70012540_70012595	0.242585	Runx3	ENSMUST00000118198.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119905.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119413.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000140305.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000122087.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2
mm10_v2_chr13_-_35906324_35906364	0.226928	Runx3	ENSMUST00000174230.1|Rpp40|ENSMUSG00000021418.9|ribonuclease P 40 subunit 	ENSMUST00000171686.2|Rpp40|ENSMUSG00000021418.9|ribonuclease P 40 subunit
mm10_v2_chr5_+_45493374_45493437	0.224717	Runx3	ENSMUST00000046122.6|Lap3|ENSMUSG00000039682.6|leucine aminopeptidase 3
mm10_v2_chr5_-_21424664_21424686	0.212875	Runx3	ENSMUST00000115245.1|Ccdc146|ENSMUSG00000064280.7|coiled-coil domain containing 146 	ENSMUST00000030552.5|Ccdc146|ENSMUSG00000064280.7|coiled-coil domain containing 146
mm10_v2_chr9_-_78481724_78481751	0.210571	Runx3	ENSMUST00000042235.8|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr17_+_8165501_8165540	0.197319	Runx3	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr11_+_75532127_75532151	0.18673	Runx3	ENSMUST00000127226.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr13_+_21735055_21735070	0.185687	Runx3	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr9_-_20898592_20898631	0.158478	Runx3	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr7_+_78783119_78783119	0.155696	Runx3	ENSMUST00000032840.4|Mrps11|ENSMUSG00000030611.4|mitochondrial ribosomal protein S11
mm10_v2_chr18_+_37355271_37355271	0.150309	Runx3	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr9_-_108094459_108094487	0.148505	Runx3	ENSMUST00000081309.7|Apeh|ENSMUSG00000032590.9|acylpeptide hydrolase
mm10_v2_chr2_+_72476225_72476259	0.148427	Runx3	ENSMUST00000157019.1|Cdca7|ENSMUSG00000055612.9|cell division cycle associated 7
mm10_v2_chr11_+_75532099_75532125	0.145761	Runx3	ENSMUST00000169547.2|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr4_-_133498538_133498556	0.141585	Runx3	ENSMUST00000125541.1|Trnp1|ENSMUSG00000056596.8|TMF1-regulated nuclear protein 1
mm10_v2_chr3_+_122245557_122245578	0.135395	Runx3	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr11_-_84916338_84916371	0.134265	Runx3	ENSMUST00000103195.4|Znhit3|ENSMUSG00000020526.6|zinc finger, HIT type 3
mm10_v2_chr7_+_35802593_35802593	0.131606	Runx3	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr1_+_74278550_74278550	0.124921	Runx3	ENSMUST00000077985.3|Gpbar1|ENSMUSG00000064272.3|G protein-coupled bile acid receptor 1
mm10_v2_chr11_-_70410010_70410042	0.119527	Runx3	ENSMUST00000019065.3|Pelp1|ENSMUSG00000018921.5|proline, glutamic acid and leucine rich protein 1 	ENSMUST00000135148.1|Pelp1|ENSMUSG00000018921.5|proline, glutamic acid and leucine rich protein 1
mm10_v2_chr10_+_128083273_128083309	0.116781	Runx3	ENSMUST00000026459.5|Atp5b|ENSMUSG00000025393.6|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm10_v2_chr8_-_27128615_27128687	0.109115	Runx3	ENSMUST00000033877.4|Brf2|ENSMUSG00000031487.4|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like
mm10_v2_chr13_-_115101909_115101984	0.106496	Runx3	ENSMUST00000061673.7|Itga1|ENSMUSG00000042284.9|integrin alpha 1
mm10_v2_chr11_-_70220969_70221027	0.0952883	Runx3	ENSMUST00000060010.2|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr7_-_35802968_35803007	0.094434	Runx3	ENSMUST00000061586.4|Zfp507|ENSMUSG00000044452.4|zinc finger protein 507
mm10_v2_chr3_+_121953213_121953295	0.0919673	Runx3	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr17_-_23599487_23599547	0.0872078	Runx3	ENSMUST00000057029.4|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr5_+_25222862_25222951	0.0768443	Runx3	ENSMUST00000045737.7|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr18_-_34651703_34651741	0.0651849	Runx3	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr8_-_115706994_115707096	0.0640946	Runx3	ENSMUST00000069009.6|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr19_+_5038826_5038938	0.0637029	Runx3	ENSMUST00000053705.6|B3gnt1|ENSMUSG00000047379.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
mm10_v2_chr7_-_16816731_16816744	0.0607266	Runx3	ENSMUST00000061390.7|Fkrp|ENSMUSG00000048920.7|fukutin related protein
mm10_v2_chr3_+_122245625_122245722	0.0592847	Runx3	ENSMUST00000178826.1|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr9_+_122117338_122117367	0.0534117	Runx3	ENSMUST00000120173.1|Snrk|ENSMUSG00000038145.10|SNF related kinase 	ENSMUST00000134949.1|Snrk|ENSMUSG00000038145.10|SNF related kinase 	ENSMUST00000119215.1|Snrk|ENSMUSG00000038145.10|SNF related kinase
mm10_v2_chr11_-_32267547_32267707	0.0503083	Runx3	ENSMUST00000109389.2|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3 	ENSMUST00000129010.1|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3 	ENSMUST00000020530.5|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3
mm10_v2_chr4_+_19575139_19575216	0.0496413	Runx3	ENSMUST00000108253.1|Rmdn1|ENSMUSG00000028229.5|regulator of microtubule dynamics 1 	ENSMUST00000029888.3|Rmdn1|ENSMUSG00000028229.5|regulator of microtubule dynamics 1
mm10_v2_chr11_-_49113757_49113757	0.0474339	Runx3	ENSMUST00000060398.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr7_+_28808795_28808832	0.0418517	Runx3	ENSMUST00000172529.1|Hnrnpl|ENSMUSG00000015165.10|heterogeneous nuclear ribonucleoprotein L
mm10_v2_chrX_-_73869804_73869905	0.03915	Runx3	ENSMUST00000066576.5|L1cam|ENSMUSG00000031391.12|L1 cell adhesion molecule 	ENSMUST00000114430.1|L1cam|ENSMUSG00000031391.12|L1 cell adhesion molecule
mm10_v2_chr8_-_11008458_11008458	0.0381697	Runx3	ENSMUST00000040514.6|Irs2|ENSMUSG00000038894.6|insulin receptor substrate 2
mm10_v2_chr7_+_127091426_127091450	0.0316158	Runx3	ENSMUST00000056288.5|AI467606|ENSMUSG00000045165.5|expressed sequence AI467606
mm10_v2_chr18_-_61786636_61786702	0.0302638	Runx3	ENSMUST00000120472.1|Afap1l1|ENSMUSG00000033032.9|actin filament associated protein 1-like 1
mm10_v2_chr4_-_70410422_70410463	0.0288224	Runx3	ENSMUST00000144099.1|Cdk5rap2|ENSMUSG00000039298.10|CDK5 regulatory subunit associated protein 2
mm10_v2_chr1_+_40465552_40465698	0.023238	Runx3	ENSMUST00000167723.1|Il18r1|ENSMUSG00000026070.9|interleukin 18 receptor 1
mm10_v2_chr8_-_54724474_54724504	0.0232378	Runx3	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr2_-_50296680_50296801	0.0195941	Runx3	ENSMUST00000144143.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000102769.4|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000133768.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm10_v2_chr11_-_70220794_70220832	0.0186468	Runx3	ENSMUST00000159867.1|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr6_-_135254170_135254289	0.0138866	Runx3	ENSMUST00000111909.1|Gsg1|ENSMUSG00000030206.7|germ cell-specific gene 1
mm10_v2_chr9_+_121719403_121719471	0.0123735	Runx3	ENSMUST00000182225.1|Nktr|ENSMUSG00000032525.8|natural killer tumor recognition sequence
mm10_v2_chr13_-_76018524_76018712	0.00983091	Runx3	ENSMUST00000050997.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000179078.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing 	ENSMUST00000167271.1|Rfesd|ENSMUSG00000043190.7|Rieske (Fe-S) domain containing
mm10_v2_chr1_+_40465976_40466006	0.00971662	Runx3	ENSMUST00000108044.2|Il18r1|ENSMUSG00000026070.9|interleukin 18 receptor 1 	ENSMUST00000087983.2|Il18r1|ENSMUSG00000026070.9|interleukin 18 receptor 1
mm10_v2_chr7_-_78783026_78783066	0.00774287	Runx3	ENSMUST00000032841.5|Mrpl46|ENSMUSG00000030612.5|mitochondrial ribosomal protein L46
mm10_v2_chr13_-_25020289_25020379	0.00425271	Runx3	ENSMUST00000021772.2|Mrs2|ENSMUSG00000021339.3|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)
mm10_v2_chr9_+_110532501_110532600	0.00161789	Runx3	ENSMUST00000153838.2|Setd2|ENSMUSG00000044791.10|SET domain containing 2
