mm10_v2_chr7_+_29307924_29308057	1.55203	Six4	ENSMUST00000108230.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1 	ENSMUST00000065181.5|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr6_+_134929118_134929164	1.41871	Six4	ENSMUST00000185152.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184504.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr3_+_94398517_94398538	1.16874	Six4	ENSMUST00000050975.3|Lingo4|ENSMUSG00000044505.3|leucine rich repeat and Ig domain containing 4
mm10_v2_chr6_+_134929089_134929103	1.14652	Six4	ENSMUST00000183867.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000184991.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5	ENSMUST00000183905.1|RP23-45G16.5|ENSMUSG00000098318.1|RP23-45G16.5
mm10_v2_chr13_+_51645232_51645276	1.0939	Six4	ENSMUST00000075853.5|Cks2|ENSMUSG00000062248.5|CDC28 protein kinase regulatory subunit 2
mm10_v2_chr17_-_12851893_12851916	1.05586	Six4	ENSMUST00000162389.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene 	ENSMUST00000162119.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene 	ENSMUST00000159223.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene
mm10_v2_chr7_+_29309429_29309513	0.952595	Six4	ENSMUST00000137848.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr8_+_94377911_94377938	0.600213	Six4	ENSMUST00000159142.1|Gm15889|ENSMUSG00000089712.1|predicted gene 15889
mm10_v2_chr11_+_85312164_85312180	0.539193	Six4	ENSMUST00000127717.1|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr3_-_129831374_129831406	0.489767	Six4	ENSMUST00000029643.8|Gar1|ENSMUSG00000028010.10|GAR1 ribonucleoprotein homolog (yeast)
mm10_v2_chr6_+_50110186_50110383	0.467287	Six4	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chrX_-_150440887_150440937	0.455174	Six4	ENSMUST00000163233.1|Tmem29|ENSMUSG00000090483.1|transmembrane protein 29
mm10_v2_chr1_+_37890477_37890542	0.428361	Six4	ENSMUST00000027256.5|Mrpl30|ENSMUSG00000026087.5|mitochondrial ribosomal protein L30
mm10_v2_chr7_+_28180272_28180316	0.423629	Six4	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr14_-_89898466_89898466	0.415809	Six4	ENSMUST00000081204.4|Gm10110|ENSMUSG00000062093.4|predicted gene 10110
mm10_v2_chr6_+_7555053_7555096	0.411937	Six4	ENSMUST00000090679.2|Tac1|ENSMUSG00000061762.6|tachykinin 1 	ENSMUST00000184986.1|Tac1|ENSMUSG00000061762.6|tachykinin 1
mm10_v2_chr19_-_10974664_10974710	0.410808	Six4	ENSMUST00000072748.6|Ms4a10|ENSMUSG00000024731.9|membrane-spanning 4-domains, subfamily A, member 10
mm10_v2_chr7_+_28180226_28180266	0.374352	Six4	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr13_-_76385028_76385028	0.359417	Six4	ENSMUST00000099365.1|Gm10760|ENSMUSG00000074798.1|predicted gene 10760
mm10_v2_chr13_+_49504774_49504816	0.344702	Six4	ENSMUST00000051504.7|Ecm2|ENSMUSG00000043631.7|extracellular matrix protein 2, female organ and adipocyte specific
mm10_v2_chr8_+_95703037_95703063	0.334271	Six4	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr13_+_54071815_54071859	0.324601	Six4	ENSMUST00000021930.8|Sfxn1|ENSMUSG00000021474.8|sideroflexin 1
mm10_v2_chr11_-_45955183_45955193	0.323113	Six4	ENSMUST00000109254.1|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr1_-_131200089_131200145	0.295307	Six4	ENSMUST00000068564.8|Rassf5|ENSMUSG00000026430.9|Ras association (RalGDS/AF-6) domain family member 5
mm10_v2_chr11_-_45955465_45955494	0.290849	Six4	ENSMUST00000011398.6|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr18_+_60212080_60212122	0.283882	Six4	ENSMUST00000031549.5|Gm4951|ENSMUSG00000073555.1|predicted gene 4951
mm10_v2_chr10_-_80918212_80918256	0.273887	Six4	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr5_-_145191511_145191548	0.257466	Six4	ENSMUST00000161845.1|Atp5j2|ENSMUSG00000038690.9|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
mm10_v2_chr9_+_78230644_78230664	0.251299	Six4	ENSMUST00000098537.3|Gsta1|ENSMUSG00000074183.3|glutathione S-transferase, alpha 1 (Ya)
mm10_v2_chr7_-_137314394_137314445	0.239768	Six4	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr3_+_145938004_145938063	0.235211	Six4	ENSMUST00000039571.7|2410004B18Rik|ENSMUSG00000036873.7|RIKEN cDNA 2410004B18 gene
mm10_v2_chr7_-_132317198_132317228	0.211828	Six4	ENSMUST00000080215.5|Chst15|ENSMUSG00000030930.7|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
mm10_v2_chr9_-_57158288_57158338	0.211555	Six4	ENSMUST00000065358.7|Commd4|ENSMUSG00000032299.9|COMM domain containing 4
mm10_v2_chr9_+_78289923_78289928	0.208921	Six4	ENSMUST00000119823.1|Gm10639|ENSMUSG00000074179.5|predicted gene 10639 	ENSMUST00000121273.1|Gm10639|ENSMUSG00000074179.5|predicted gene 10639
mm10_v2_chr13_+_73626886_73627001	0.198758	Six4	ENSMUST00000022104.7|Tert|ENSMUSG00000021611.8|telomerase reverse transcriptase
mm10_v2_chr2_+_25080316_25080343	0.191854	Six4	ENSMUST00000044078.3|Entpd8|ENSMUSG00000036813.5|ectonucleoside triphosphate diphosphohydrolase 8 	ENSMUST00000114380.2|Entpd8|ENSMUSG00000036813.5|ectonucleoside triphosphate diphosphohydrolase 8
mm10_v2_chr10_-_76442758_76442912	0.187146	Six4	ENSMUST00000001179.5|Pcnt|ENSMUSG00000001151.9|pericentrin (kendrin)
mm10_v2_chr7_+_18991245_18991319	0.180078	Six4	ENSMUST00000130268.1|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin 	ENSMUST00000059331.8|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin 	ENSMUST00000131087.1|Mypop|ENSMUSG00000048481.9|Myb-related transcription factor, partner of profilin
mm10_v2_chr19_+_8764934_8765034	0.167119	Six4	ENSMUST00000184663.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr6_+_124931378_124931425	0.153957	Six4	ENSMUST00000032214.7|Mlf2|ENSMUSG00000030120.8|myeloid leukemia factor 2 	ENSMUST00000180095.1|Mlf2|ENSMUSG00000030120.8|myeloid leukemia factor 2
mm10_v2_chr3_+_139205658_139205694	0.140075	Six4	ENSMUST00000106239.1|Stpg2|ENSMUSG00000047940.7|sperm tail PG rich repeat containing 2
mm10_v2_chr1_-_180813534_180813583	0.132391	Six4	ENSMUST00000159789.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000081026.4|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr15_-_66831625_66831668	0.12361	Six4	ENSMUST00000164163.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr9_-_70503718_70503805	0.11958	Six4	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chr19_-_38224096_38224183	0.11861	Six4	ENSMUST00000067167.5|Fra10ac1|ENSMUSG00000054237.5|FRA10AC1 homolog (human)
mm10_v2_chr1_+_54250673_54250699	0.115786	Six4	ENSMUST00000027128.4|Ccdc150|ENSMUSG00000025983.5|coiled-coil domain containing 150
mm10_v2_chr11_-_118342500_118342569	0.114489	Six4	ENSMUST00000103024.3|BC100451|ENSMUSG00000076433.4|cDNA sequence BC100451
mm10_v2_chr19_+_6400523_6400583	0.109477	Six4	ENSMUST00000146831.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000035716.8|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000138555.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000167240.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr15_+_92051153_92051170	0.10815	Six4	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr12_-_41485751_41485751	0.0945445	Six4	ENSMUST00000043884.4|Lrrn3|ENSMUSG00000036295.4|leucine rich repeat protein 3, neuronal
mm10_v2_chr8_+_94214567_94214608	0.0942584	Six4	ENSMUST00000079961.6|Nup93|ENSMUSG00000032939.7|nucleoporin 93
mm10_v2_chr14_-_103843685_103843703	0.0885983	Six4	ENSMUST00000172237.1|Ednrb|ENSMUSG00000022122.8|endothelin receptor type B
mm10_v2_chr15_-_79834261_79834285	0.081217	Six4	ENSMUST00000148358.1|Cbx6|ENSMUSG00000089715.5|chromobox 6
mm10_v2_chr1_-_180813591_180813632	0.073052	Six4	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr2_-_10048580_10048621	0.0678912	Six4	ENSMUST00000026888.4|Taf3|ENSMUSG00000025782.6|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_-_91444622_91444726	0.0557868	Six4	ENSMUST00000064652.7|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000102594.4|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000094835.2|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene
mm10_v2_chr7_-_127935429_127935450	0.0528173	Six4	ENSMUST00000141385.1|Prss36|ENSMUSG00000070371.5|protease, serine, 36 	ENSMUST00000156152.1|Prss36|ENSMUSG00000070371.5|protease, serine, 36
mm10_v2_chr19_+_29410919_29410981	0.0447082	Six4	ENSMUST00000112576.2|Pdcd1lg2|ENSMUSG00000016498.9|programmed cell death 1 ligand 2
mm10_v2_chr10_+_79755103_79755126	0.0408398	Six4	ENSMUST00000020577.2|Fgf22|ENSMUSG00000020327.3|fibroblast growth factor 22
mm10_v2_chr16_+_11405648_11405713	0.0389132	Six4	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr2_-_103797617_103797662	0.0353292	Six4	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr5_-_41764493_41764496	0.0335625	Six4	ENSMUST00000060820.6|Nkx3-2|ENSMUSG00000049691.7|NK3 homeobox 2
mm10_v2_chr6_+_115134899_115134982	0.0306751	Six4	ENSMUST00000009538.5|Syn2|ENSMUSG00000009394.7|synapsin II 	ENSMUST00000169345.1|Syn2|ENSMUSG00000009394.7|synapsin II
mm10_v2_chr3_-_30969399_30969425	0.0303515	Six4	ENSMUST00000177992.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000129817.2|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000168645.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000108255.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000064718.5|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000099163.3|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila)
mm10_v2_chr8_-_85067982_85067982	0.0301666	Six4	ENSMUST00000177563.1|Gm5741|ENSMUSG00000095845.1|predicted gene 5741
mm10_v2_chr19_+_6400611_6400623	0.0213825	Six4	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr3_+_139205887_139205909	0.00224919	Six4	ENSMUST00000062306.6|Stpg2|ENSMUSG00000047940.7|sperm tail PG rich repeat containing 2
