mm10_v2_chr15_-_101562889_101562950	0.451008	Smad4	ENSMUST00000023714.4|4732456N10Rik|ENSMUSG00000048699.4|RIKEN cDNA 4732456N10 gene
mm10_v2_chr14_-_25903100_25903100	0.336485	Smad4	ENSMUST00000052286.8|Plac9a|ENSMUSG00000095304.2|placenta specific 9a
mm10_v2_chr2_+_32628390_32628415	0.331161	Smad4	ENSMUST00000156578.1|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr13_-_21832194_21832198	0.295617	Smad4	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr10_+_75589363_75589390	0.279991	Smad4	ENSMUST00000072217.2|Ggt5|ENSMUSG00000006344.10|gamma-glutamyltransferase 5
mm10_v2_chr10_+_33905015_33905111	0.264708	Smad4	ENSMUST00000169670.1|Rsph4a|ENSMUSG00000039552.7|radial spoke head 4 homolog A (Chlamydomonas)
mm10_v2_chr7_-_27181149_27181162	0.244529	Smad4	ENSMUST00000071986.6|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity 	ENSMUST00000121848.1|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity
mm10_v2_chr13_+_23531044_23531088	0.231897	Smad4	ENSMUST00000102972.3|Hist1h4h|ENSMUSG00000060981.5|histone cluster 1, H4h
mm10_v2_chr7_-_4778141_4778144	0.229693	Smad4	ENSMUST00000094892.5|Il11|ENSMUSG00000004371.8|interleukin 11
mm10_v2_chr13_+_21735055_21735070	0.228957	Smad4	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr6_+_17749170_17749265	0.227711	Smad4	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr16_+_17898617_17898647	0.212526	Smad4	ENSMUST00000055374.6|Tssk2|ENSMUSG00000045521.6|testis-specific serine kinase 2
mm10_v2_chr11_-_99986593_99986608	0.210112	Smad4	ENSMUST00000105050.2|Krtap16-1|ENSMUSG00000078253.2|keratin associated protein 16-1
mm10_v2_chr11_-_49113757_49113757	0.207321	Smad4	ENSMUST00000060398.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr14_+_55575617_55575660	0.206252	Smad4	ENSMUST00000022826.5|Fitm1|ENSMUSG00000022215.5|fat storage-inducing transmembrane protein 1
mm10_v2_chr17_+_32403006_32403006	0.185277	Smad4	ENSMUST00000065921.5|A530088E08Rik|ENSMUSG00000053467.5|RIKEN cDNA A530088E08 gene
mm10_v2_chr13_-_23551648_23551672	0.184801	Smad4	ENSMUST00000102971.1|Hist1h4f|ENSMUSG00000069274.3|histone cluster 1, H4f
mm10_v2_chr10_+_80150448_80150482	0.18351	Smad4	ENSMUST00000153477.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr13_+_22043189_22043214	0.182289	Smad4	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr7_-_70360593_70360746	0.178859	Smad4	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr1_+_53061637_53061663	0.171266	Smad4	ENSMUST00000027269.5|Mstn|ENSMUSG00000026100.5|myostatin
mm10_v2_chr3_-_96220880_96220899	0.162296	Smad4	ENSMUST00000090782.3|Hist2h2ac|ENSMUSG00000068855.3|histone cluster 2, H2ac
mm10_v2_chr4_-_115781012_115781023	0.161486	Smad4	ENSMUST00000106521.1|Tex38|ENSMUSG00000044556.3|testis expressed 38
mm10_v2_chr13_-_22042949_22042978	0.159519	Smad4	ENSMUST00000091741.4|Hist1h2ag|ENSMUSG00000069301.4|histone cluster 1, H2ag
mm10_v2_chr4_+_116221689_116221698	0.158849	Smad4	ENSMUST00000106490.2|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr3_-_33143227_33143266	0.15005	Smad4	ENSMUST00000108219.1|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr4_+_116221633_116221661	0.148354	Smad4	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr10_+_18845071_18845112	0.146588	Smad4	ENSMUST00000019998.7|Perp|ENSMUSG00000019851.7|PERP, TP53 apoptosis effector
mm10_v2_chrX_+_41401476_41401565	0.145661	Smad4	ENSMUST00000165288.1|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr3_-_96926020_96926067	0.144751	Smad4	ENSMUST00000062944.5|Gja8|ENSMUSG00000049908.5|gap junction protein, alpha 8
mm10_v2_chr13_+_23581563_23581598	0.14308	Smad4	ENSMUST00000102968.1|Hist1h4d|ENSMUSG00000061482.6|histone cluster 1, H4d
mm10_v2_chr12_-_100899436_100899524	0.13496	Smad4	ENSMUST00000053668.3|Gpr68|ENSMUSG00000047415.5|G protein-coupled receptor 68
mm10_v2_chr6_-_99726392_99726414	0.130976	Smad4	ENSMUST00000032152.8|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000101120.4|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000008273.6|Prok2|ENSMUSG00000030069.9|prokineticin 2
mm10_v2_chr12_-_109600328_109600348	0.124894	Smad4	ENSMUST00000149046.2|Rtl1|ENSMUSG00000085925.2|retrotransposon-like 1
mm10_v2_chr1_-_75232093_75232093	0.12477	Smad4	ENSMUST00000180101.1|A630095N17Rik|ENSMUSG00000096094.1|RIKEN cDNA A630095N17 gene
mm10_v2_chr11_+_53433299_53433357	0.121455	Smad4	ENSMUST00000018382.6|Gdf9|ENSMUSG00000018238.6|growth differentiation factor 9
mm10_v2_chr2_+_69670100_69670134	0.119247	Smad4	ENSMUST00000100050.3|Klhl41|ENSMUSG00000075307.3|kelch-like 41
mm10_v2_chr2_+_55437100_55437182	0.11889	Smad4	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr10_-_91082704_91082773	0.110918	Smad4	ENSMUST00000162618.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1 	ENSMUST00000020157.6|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1 	ENSMUST00000160788.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr19_-_10738971_10738982	0.109995	Smad4	ENSMUST00000025571.7|Cd5|ENSMUSG00000024669.7|CD5 antigen
mm10_v2_chr13_-_23934156_23934225	0.105007	Smad4	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chr14_+_12189943_12190001	0.104272	Smad4	ENSMUST00000119888.1|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr6_+_116650674_116650690	0.104096	Smad4	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chr6_+_54039558_54039575	0.102699	Smad4	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr4_+_116221590_116221618	0.10112	Smad4	ENSMUST00000147292.1|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr9_+_57940104_57940120	0.100614	Smad4	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr6_-_129451906_129452000	0.100567	Smad4	ENSMUST00000037481.7|Clec1a|ENSMUSG00000033082.8|C-type lectin domain family 1, member a
mm10_v2_chr2_-_155834845_155834861	0.0988395	Smad4	ENSMUST00000029143.5|Fam83c|ENSMUSG00000074647.3|family with sequence similarity 83, member C
mm10_v2_chr9_+_44072196_44072211	0.0973641	Smad4	ENSMUST00000176671.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr17_+_34263209_34263256	0.0959163	Smad4	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr1_+_153652943_153653025	0.0946187	Smad4	ENSMUST00000041776.5|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr19_-_23448322_23448350	0.0919756	Smad4	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr12_-_36156781_36156825	0.0912504	Smad4	ENSMUST00000020856.4|Bzw2|ENSMUSG00000020547.4|basic leucine zipper and W2 domains 2
mm10_v2_chr3_-_116968827_116968858	0.0896825	Smad4	ENSMUST00000119557.1|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr10_-_42583628_42583639	0.0884995	Smad4	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr7_+_119895836_119895884	0.0880508	Smad4	ENSMUST00000106518.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1 	ENSMUST00000054440.3|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chrX_+_56779437_56779565	0.0870527	Smad4	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr16_+_34784917_34784935	0.0842444	Smad4	ENSMUST00000023538.8|Mylk|ENSMUSG00000022836.10|myosin, light polypeptide kinase
mm10_v2_chr17_-_25081138_25081201	0.0819247	Smad4	ENSMUST00000024984.6|Tmem204|ENSMUSG00000024168.7|transmembrane protein 204
mm10_v2_chr7_+_45785331_45785390	0.0798674	Smad4	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr10_-_91082653_91082662	0.0784592	Smad4	ENSMUST00000159110.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr6_+_147032528_147032547	0.0776329	Smad4	ENSMUST00000036194.4|Rep15|ENSMUSG00000040121.4|RAB15 effector protein
mm10_v2_chr15_+_102102926_102102988	0.0774072	Smad4	ENSMUST00000169627.1|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase 	ENSMUST00000046144.9|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase
mm10_v2_chr11_+_59542748_59542775	0.0773967	Smad4	ENSMUST00000149126.1|Nlrp3|ENSMUSG00000032691.8|NLR family, pyrin domain containing 3
mm10_v2_chr1_-_173367638_173367695	0.0769423	Smad4	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr5_+_30913398_30913403	0.0766494	Smad4	ENSMUST00000031055.5|Emilin1|ENSMUSG00000029163.7|elastin microfibril interfacer 1
mm10_v2_chr1_+_152399824_152399881	0.0765272	Smad4	ENSMUST00000044311.8|Colgalt2|ENSMUSG00000032649.8|collagen beta(1-O)galactosyltransferase 2
mm10_v2_chr1_+_187997821_187997834	0.0761152	Smad4	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_-_133801031_133801041	0.0735576	Smad4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chrX_-_104201126_104201185	0.0728479	Smad4	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr7_+_45413657_45413705	0.0727511	Smad4	ENSMUST00000058879.6|Ntf5|ENSMUSG00000074121.2|neurotrophin 5
mm10_v2_chrX_-_150812932_150813154	0.0721533	Smad4	ENSMUST00000131241.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000147152.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000143843.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr1_+_187997835_187997882	0.070847	Smad4	ENSMUST00000110938.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr15_-_38300693_38300715	0.0704684	Smad4	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr7_-_89517576_89517587	0.0690233	Smad4	ENSMUST00000041761.5|Prss23|ENSMUSG00000039405.6|protease, serine, 23
mm10_v2_chr17_+_34153072_34153239	0.0664723	Smad4	ENSMUST00000114232.2|H2-DMb1|ENSMUSG00000079547.2|histocompatibility 2, class II, locus Mb1
mm10_v2_chr1_-_153186447_153186447	0.0654942	Smad4	ENSMUST00000027753.6|Lamc2|ENSMUSG00000026479.7|laminin, gamma 2
mm10_v2_chrX_-_150588071_150588153	0.0639927	Smad4	ENSMUST00000140207.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112719.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112727.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112721.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000026303.9|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr2_+_120476911_120476976	0.0638026	Smad4	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr11_+_69846665_69846681	0.062943	Smad4	ENSMUST00000019605.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr7_+_101394361_101394436	0.0616096	Smad4	ENSMUST00000154239.1|Arap1|ENSMUSG00000032812.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 	ENSMUST00000098243.2|Arap1|ENSMUSG00000032812.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm10_v2_chr11_-_33147400_33147448	0.0612808	Smad4	ENSMUST00000020507.7|Fgf18|ENSMUSG00000057967.6|fibroblast growth factor 18
mm10_v2_chr6_+_113472276_113472291	0.0609288	Smad4	ENSMUST00000147316.1|Il17rc|ENSMUSG00000030281.10|interleukin 17 receptor C
mm10_v2_chr7_+_117380937_117380992	0.0603981	Smad4	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chr7_-_100855403_100855440	0.0603791	Smad4	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr11_-_95699143_95699143	0.0595182	Smad4	ENSMUST00000062249.2|Gm9796|ENSMUSG00000045075.2|predicted gene 9796
mm10_v2_chr11_-_69413675_69413675	0.0575526	Smad4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chrX_-_104201099_104201117	0.0575489	Smad4	ENSMUST00000087879.4|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr7_+_141949846_141949868	0.0573258	Smad4	ENSMUST00000172652.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr11_-_116110211_116110259	0.0571391	Smad4	ENSMUST00000106441.1|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47 	ENSMUST00000021120.5|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47
mm10_v2_chr5_+_19907502_19907551	0.0565303	Smad4	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chrX_-_136741155_136741352	0.0554214	Smad4	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr13_-_115090123_115090241	0.054474	Smad4	ENSMUST00000109226.3|Pelo|ENSMUSG00000042275.8|pelota homolog (Drosophila)
mm10_v2_chr9_+_53771499_53771535	0.0541317	Smad4	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr1_+_162477680_162477680	0.0535954	Smad4	ENSMUST00000159707.1|Gm10176|ENSMUSG00000066752.4|predicted gene 10176
mm10_v2_chr3_+_104781048_104781128	0.0526065	Smad4	ENSMUST00000002298.6|Ppm1j|ENSMUSG00000002228.6|protein phosphatase 1J
mm10_v2_chr17_-_32403526_32403537	0.0522214	Smad4	ENSMUST00000137458.1|Rasal3|ENSMUSG00000052142.9|RAS protein activator like 3
mm10_v2_chr11_-_100762928_100762936	0.0516393	Smad4	ENSMUST00000107360.2|Hcrt|ENSMUSG00000045471.4|hypocretin 	ENSMUST00000055083.3|Hcrt|ENSMUSG00000045471.4|hypocretin
mm10_v2_chr17_-_32403551_32403590	0.0513015	Smad4	ENSMUST00000135618.1|Rasal3|ENSMUSG00000052142.9|RAS protein activator like 3 	ENSMUST00000063824.7|Rasal3|ENSMUSG00000052142.9|RAS protein activator like 3
mm10_v2_chr2_+_96318014_96318216	0.0511667	Smad4	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr9_+_106429537_106429548	0.0485028	Smad4	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr11_+_105975204_105975215	0.0483449	Smad4	ENSMUST00000001964.7|Ace|ENSMUSG00000020681.8|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm10_v2_chr14_-_54577578_54577661	0.0478735	Smad4	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr7_+_101421691_101421726	0.0477829	Smad4	ENSMUST00000163751.2|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000084894.7|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000166652.1|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated
mm10_v2_chr11_+_69846610_69846659	0.0470127	Smad4	ENSMUST00000152566.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3 	ENSMUST00000108633.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr2_+_3114220_3114225	0.0455286	Smad4	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr17_-_46032366_46032383	0.0452485	Smad4	ENSMUST00000071648.5|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A 	ENSMUST00000142351.2|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A 	ENSMUST00000167860.1|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr9_-_21852603_21852644	0.044929	Smad4	ENSMUST00000034728.7|Dock6|ENSMUSG00000032198.8|dedicator of cytokinesis 6
mm10_v2_chr11_+_4637734_4637789	0.0443526	Smad4	ENSMUST00000109930.2|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2 	ENSMUST00000070257.7|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2
mm10_v2_chr7_+_141949982_141950086	0.0440042	Smad4	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr16_-_55283237_55283287	0.0416827	Smad4	ENSMUST00000036412.3|Zpld1|ENSMUSG00000064310.4|zona pellucida like domain containing 1
mm10_v2_chr13_-_102958084_102958173	0.0409753	Smad4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr10_+_79973737_79973737	0.0407887	Smad4	ENSMUST00000149148.1|Grin3b|ENSMUSG00000035745.2|glutamate receptor, ionotropic, NMDA3B
mm10_v2_chr4_-_95052170_95052181	0.0406413	Smad4	ENSMUST00000058555.2|Jun|ENSMUSG00000052684.3|Jun oncogene
mm10_v2_chr14_+_57826210_57826272	0.0401199	Smad4	ENSMUST00000022538.3|Mrp63|ENSMUSG00000021967.3|mitochondrial ribosomal protein 63
mm10_v2_chr15_-_89429093_89429223	0.0379432	Smad4	ENSMUST00000170460.1|Chkb|ENSMUSG00000022617.8|choline kinase beta
mm10_v2_chr3_-_102964124_102964137	0.037541	Smad4	ENSMUST00000058899.8|Nr1h5|ENSMUSG00000048938.8|nuclear receptor subfamily 1, group H, member 5
mm10_v2_chr16_-_36642742_36642805	0.0372739	Smad4	ENSMUST00000135280.1|Cd86|ENSMUSG00000022901.7|CD86 antigen
mm10_v2_chr2_-_93046053_93046172	0.0365231	Smad4	ENSMUST00000111272.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000178666.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000147339.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11
mm10_v2_chr4_+_118621160_118621239	0.0364191	Smad4	ENSMUST00000147373.1|Ebna1bp2|ENSMUSG00000028729.9|EBNA1 binding protein 2
mm10_v2_chr17_+_34597852_34597894	0.0360494	Smad4	ENSMUST00000174496.2|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor 	ENSMUST00000015596.3|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor 	ENSMUST00000173992.1|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor
mm10_v2_chr5_-_129670074_129670100	0.0360183	Smad4	ENSMUST00000049778.6|Zfp11|ENSMUSG00000051034.7|zinc finger protein 11
mm10_v2_chr3_+_68572245_68572392	0.0359061	Smad4	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr3_-_116968969_116969004	0.0353696	Smad4	ENSMUST00000143611.1|Palmd|ENSMUSG00000033377.8|palmdelphin 	ENSMUST00000040097.7|Palmd|ENSMUSG00000033377.8|palmdelphin
mm10_v2_chr10_-_92164666_92164754	0.0349379	Smad4	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr5_+_121795034_121795034	0.0348721	Smad4	ENSMUST00000162327.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr4_+_118620799_118620899	0.0343302	Smad4	ENSMUST00000030501.8|Ebna1bp2|ENSMUSG00000028729.9|EBNA1 binding protein 2
mm10_v2_chr7_+_4690760_4690928	0.0333327	Smad4	ENSMUST00000048248.7|Brsk1|ENSMUSG00000035390.10|BR serine/threonine kinase 1
mm10_v2_chr17_-_46031813_46031863	0.0332684	Smad4	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr18_+_57133065_57133090	0.0322045	Smad4	ENSMUST00000075770.6|Megf10|ENSMUSG00000024593.9|multiple EGF-like-domains 10
mm10_v2_chr17_-_35162969_35163040	0.0313386	Smad4	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr1_+_74588347_74588383	0.0302631	Smad4	ENSMUST00000113732.1|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr15_-_98607611_98607638	0.0290811	Smad4	ENSMUST00000096224.4|Adcy6|ENSMUSG00000022994.8|adenylate cyclase 6
mm10_v2_chr4_+_138967112_138967127	0.0290532	Smad4	ENSMUST00000116094.2|Rnf186|ENSMUSG00000070661.5|ring finger protein 186
mm10_v2_chr19_+_4231899_4231928	0.0287403	Smad4	ENSMUST00000025773.3|Pold4|ENSMUSG00000024854.3|polymerase (DNA-directed), delta 4
mm10_v2_chr7_+_101361250_101361287	0.028299	Smad4	ENSMUST00000137384.1|Arap1|ENSMUSG00000032812.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm10_v2_chr15_+_39076885_39076938	0.0275551	Smad4	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr9_+_122888471_122888471	0.0270492	Smad4	ENSMUST00000063980.6|Zkscan7|ENSMUSG00000063488.5|zinc finger with KRAB and SCAN domains 7
mm10_v2_chr8_-_47352348_47352367	0.0266511	Smad4	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr4_+_133011506_133011546	0.0257047	Smad4	ENSMUST00000105915.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1 	ENSMUST00000105916.1|Ahdc1|ENSMUSG00000037692.8|AT hook, DNA binding motif, containing 1
mm10_v2_chr14_-_55524975_55524985	0.0254807	Smad4	ENSMUST00000062232.7|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr14_-_20496780_20496901	0.0250544	Smad4	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr5_+_92683625_92683648	0.0246975	Smad4	ENSMUST00000168878.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr19_+_5740885_5740904	0.0245439	Smad4	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr12_+_36381519_36381594	0.02308	Smad4	ENSMUST00000062041.5|Ispd|ENSMUSG00000043153.5|isoprenoid synthase domain containing
mm10_v2_chr9_-_36767595_36767679	0.0215519	Smad4	ENSMUST00000120381.2|Stt3a|ENSMUSG00000032116.11|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm10_v2_chr1_+_87470258_87470281	0.0207708	Smad4	ENSMUST00000027476.4|3110079O15Rik|ENSMUSG00000026258.4|RIKEN cDNA 3110079O15 gene
mm10_v2_chr14_-_31168587_31168641	0.0194747	Smad4	ENSMUST00000036618.7|Stab1|ENSMUSG00000042286.7|stabilin 1
mm10_v2_chr14_-_55524938_55524967	0.0194472	Smad4	ENSMUST00000178694.1|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr6_+_15720654_15720747	0.0190126	Smad4	ENSMUST00000101663.3|Mdfic|ENSMUSG00000041390.12|MyoD family inhibitor domain containing
mm10_v2_chr7_+_127485221_127485221	0.0187018	Smad4	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr9_+_45182034_45182034	0.018031	Smad4	ENSMUST00000164650.1|BC049352|ENSMUSG00000091996.1|cDNA sequence BC049352
mm10_v2_chr7_-_45052865_45052914	0.0175882	Smad4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr18_-_35498856_35498925	0.0175415	Smad4	ENSMUST00000025215.8|Sil1|ENSMUSG00000024357.9|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm10_v2_chr4_+_126677630_126677646	0.01743	Smad4	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr19_+_46328179_46328205	0.0171011	Smad4	ENSMUST00000026256.2|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15 	ENSMUST00000177667.1|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15
mm10_v2_chr18_+_60526194_60526234	0.0162299	Smad4	ENSMUST00000025505.5|Dctn4|ENSMUSG00000024603.7|dynactin 4
mm10_v2_chr9_-_57552760_57552771	0.0160693	Smad4	ENSMUST00000034856.8|Mpi|ENSMUSG00000032306.8|mannose phosphate isomerase
mm10_v2_chr8_+_45658273_45658298	0.0153781	Smad4	ENSMUST00000153798.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr11_+_97663366_97663414	0.0149724	Smad4	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr18_-_38918642_38918771	0.0148366	Smad4	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr14_-_64949838_64949886	0.0148078	Smad4	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr1_-_64121456_64121491	0.0144311	Smad4	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr14_-_18331855_18331862	0.0141925	Smad4	ENSMUST00000022296.6|Ube2e1|ENSMUSG00000021774.6|ubiquitin-conjugating enzyme E2E 1
mm10_v2_chr1_-_74588117_74588145	0.0137959	Smad4	ENSMUST00000066986.6|Zfp142|ENSMUSG00000026135.11|zinc finger protein 142
mm10_v2_chr10_+_91082940_91083028	0.0137653	Smad4	ENSMUST00000020150.3|Ikbip|ENSMUSG00000019975.5|IKBKB interacting protein
mm10_v2_chr15_-_98728120_98728198	0.0136927	Smad4	ENSMUST00000003445.6|Fkbp11|ENSMUSG00000003355.6|FK506 binding protein 11
mm10_v2_chr14_-_55524191_55524223	0.0126031	Smad4	ENSMUST00000111404.1|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr15_-_27681498_27681554	0.0124869	Smad4	ENSMUST00000100739.3|Fam105a|ENSMUSG00000056069.8|family with sequence similarity 105, member A
mm10_v2_chr2_+_69897220_69897247	0.0117524	Smad4	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr3_+_94837533_94837567	0.0115703	Smad4	ENSMUST00000107270.2|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr7_+_110221697_110221708	0.0113419	Smad4	ENSMUST00000033325.7|Swap70|ENSMUSG00000031015.7|SWA-70 protein
mm10_v2_chr10_+_90576708_90576766	0.0112157	Smad4	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr9_+_61373482_61373535	0.0109264	Smad4	ENSMUST00000160541.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161207.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159630.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr6_+_113471427_113471475	0.0093874	Smad4	ENSMUST00000058300.7|Il17rc|ENSMUSG00000030281.10|interleukin 17 receptor C
mm10_v2_chr4_-_134245579_134245604	0.00877261	Smad4	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr7_-_119895697_119895752	0.00783131	Smad4	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr10_+_90576777_90576815	0.00750352	Smad4	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr5_-_24601961_24602012	0.00750021	Smad4	ENSMUST00000030791.7|Smarcd3|ENSMUSG00000028949.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
mm10_v2_chr2_+_119547697_119547762	0.00631405	Smad4	ENSMUST00000014221.6|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1 	ENSMUST00000119172.1|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1
mm10_v2_chr9_+_108953597_108953745	0.00611174	Smad4	ENSMUST00000026740.5|Col7a1|ENSMUSG00000025650.6|collagen, type VII, alpha 1
mm10_v2_chr9_+_61373219_61373438	0.00581751	Smad4	ENSMUST00000162583.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161993.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160882.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160724.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000162973.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159050.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr4_+_128688726_128688795	0.00544136	Smad4	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr4_+_117835387_117835428	0.00534116	Smad4	ENSMUST00000169885.1|Slc6a9|ENSMUSG00000028542.11|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm10_v2_chr17_+_46646225_46646272	0.00505883	Smad4	ENSMUST00000002844.7|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2 	ENSMUST00000113429.1|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2 	ENSMUST00000113430.1|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2
mm10_v2_chr18_+_5593566_5593602	0.00476737	Smad4	ENSMUST00000160910.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr14_-_64949632_64949674	0.00422413	Smad4	ENSMUST00000176832.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr9_-_49798905_49798931	0.00394627	Smad4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr1_-_54194048_54194048	0.00372425	Smad4	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr5_+_19907774_19907861	0.00335704	Smad4	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr7_-_30362772_30362772	0.00299979	Smad4	ENSMUST00000046351.5|Lrfn3|ENSMUSG00000036957.7|leucine rich repeat and fibronectin type III domain containing 3
mm10_v2_chr9_+_61373608_61373672	0.00275963	Smad4	ENSMUST00000161689.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr17_+_75178911_75178961	0.00211823	Smad4	ENSMUST00000112514.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr2_+_155940728_155940728	0.00194783	Smad4	ENSMUST00000109629.1|Gm15557|ENSMUSG00000078972.1|predicted gene 15557
mm10_v2_chr4_-_25242833_25242876	0.00176738	Smad4	ENSMUST00000108204.1|Fhl5|ENSMUSG00000028259.7|four and a half LIM domains 5 	ENSMUST00000029922.7|Fhl5|ENSMUSG00000028259.7|four and a half LIM domains 5
mm10_v2_chr9_-_20898592_20898631	0.0015308	Smad4	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr9_+_108953578_108953593	0.00126151	Smad4	ENSMUST00000112070.1|Col7a1|ENSMUSG00000025650.6|collagen, type VII, alpha 1
mm10_v2_chr17_+_75178797_75178824	0.0012457	Smad4	ENSMUST00000112516.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1 	ENSMUST00000135447.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chrX_-_7898950_7899000	0.000581291	Smad4	ENSMUST00000115655.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1 	ENSMUST00000156741.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chrX_+_151803313_151803376	0.000221924	Smad4	ENSMUST00000026292.8|Huwe1|ENSMUSG00000025261.11|HECT, UBA and WWE domain containing 1
mm10_v2_chr6_-_83775767_83775826	0.000165487	Smad4	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
