mm10_v2_chr7_-_127890918_127890970	3.97204	Sox1	ENSMUST00000121394.1|Prss53|ENSMUSG00000044139.11|protease, serine, 53
mm10_v2_chrX_+_164162167_164162194	1.46969	Sox1	ENSMUST00000131543.1|Ace2|ENSMUSG00000015405.9|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm10_v2_chr8_+_83165348_83165360	1.23147	Sox1	ENSMUST00000034145.4|Tbc1d9|ENSMUSG00000031709.9|TBC1 domain family, member 9
mm10_v2_chr17_+_34263209_34263256	0.977829	Sox1	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr17_+_34969912_34969912	0.786007	Sox1	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chr9_+_44326804_44326896	0.759095	Sox1	ENSMUST00000054708.3|Dpagt1|ENSMUSG00000032123.4|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm10_v2_chr13_+_42301270_42301270	0.698064	Sox1	ENSMUST00000021796.7|Edn1|ENSMUSG00000021367.7|endothelin 1
mm10_v2_chr6_+_37530173_37530198	0.66406	Sox1	ENSMUST00000040987.7|Akr1d1|ENSMUSG00000038641.8|aldo-keto reductase family 1, member D1
mm10_v2_chr8_+_13159135_13159168	0.649742	Sox1	ENSMUST00000033824.6|Lamp1|ENSMUSG00000031447.6|lysosomal-associated membrane protein 1
mm10_v2_chr17_-_34287770_34287830	0.634622	Sox1	ENSMUST00000174751.1|H2-Aa|ENSMUSG00000036594.8|histocompatibility 2, class II antigen A, alpha 	ENSMUST00000040655.6|H2-Aa|ENSMUSG00000036594.8|histocompatibility 2, class II antigen A, alpha
mm10_v2_chr9_-_108305941_108305958	0.62481	Sox1	ENSMUST00000044725.7|Tcta|ENSMUSG00000039461.7|T cell leukemia translocation altered gene
mm10_v2_chr19_+_3972322_3972345	0.594111	Sox1	ENSMUST00000143380.1|Aldh3b2|ENSMUSG00000075296.4|aldehyde dehydrogenase 3 family, member B2
mm10_v2_chr1_+_109983737_109983737	0.518823	Sox1	ENSMUST00000172005.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr7_+_80343091_80343146	0.472355	Sox1	ENSMUST00000032747.5|Hddc3|ENSMUSG00000030532.5|HD domain containing 3
mm10_v2_chr5_-_109691041_109691041	0.374418	Sox1	ENSMUST00000092720.3|5430403G16Rik|ENSMUSG00000072763.2|RIKEN cDNA 5430403G16 gene
mm10_v2_chrX_+_74297097_74297178	0.355139	Sox1	ENSMUST00000019231.5|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1 	ENSMUST00000147900.1|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1 	ENSMUST00000147275.1|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1 	ENSMUST00000114171.3|Atp6ap1|ENSMUSG00000019087.7|ATPase, H+ transporting, lysosomal accessory protein 1
mm10_v2_chr2_+_34406845_34406880	0.352916	Sox1	ENSMUST00000124443.1|Mapkap1|ENSMUSG00000038696.8|mitogen-activated protein kinase associated protein 1 	ENSMUST00000113124.1|Mapkap1|ENSMUSG00000038696.8|mitogen-activated protein kinase associated protein 1
mm10_v2_chr1_-_195131536_195131588	0.301484	Sox1	ENSMUST00000075451.6|Cr1l|ENSMUSG00000016481.10|complement component (3b/4b) receptor 1-like
mm10_v2_chr19_-_8218832_8218899	0.301028	Sox1	ENSMUST00000113298.2|Slc22a29|ENSMUSG00000075044.5|solute carrier family 22. member 29
mm10_v2_chr18_+_37496997_37496997	0.301011	Sox1	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chr2_+_84798828_84798861	0.271067	Sox1	ENSMUST00000102642.2|Ube2l6|ENSMUSG00000027078.8|ubiquitin-conjugating enzyme E2L 6 	ENSMUST00000150325.1|Ube2l6|ENSMUSG00000027078.8|ubiquitin-conjugating enzyme E2L 6
mm10_v2_chr15_-_74997634_74997634	0.265874	Sox1	ENSMUST00000023248.6|Ly6a|ENSMUSG00000075602.4|lymphocyte antigen 6 complex, locus A
mm10_v2_chr17_+_47737030_47737107	0.26368	Sox1	ENSMUST00000086932.3|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr15_-_75048837_75048837	0.248434	Sox1	ENSMUST00000179762.1|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1 	ENSMUST00000065408.9|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1
mm10_v2_chr11_-_68853119_68853140	0.225952	Sox1	ENSMUST00000018880.7|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chr11_-_68853019_68853101	0.222688	Sox1	ENSMUST00000108672.1|Ndel1|ENSMUSG00000018736.8|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm10_v2_chr8_-_88636117_88636132	0.215112	Sox1	ENSMUST00000034087.7|Snx20|ENSMUSG00000031662.7|sorting nexin 20
mm10_v2_chr5_-_129670074_129670100	0.200168	Sox1	ENSMUST00000049778.6|Zfp11|ENSMUSG00000051034.7|zinc finger protein 11
mm10_v2_chr7_+_67655414_67655447	0.198205	Sox1	ENSMUST00000107470.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr5_+_21186267_21186340	0.195518	Sox1	ENSMUST00000036031.8|Gsap|ENSMUSG00000039934.8|gamma-secretase activating protein
mm10_v2_chr11_+_96133786_96133786	0.192531	Sox1	ENSMUST00000167258.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr7_-_120145286_120145292	0.15531	Sox1	ENSMUST00000033207.4|Zp2|ENSMUSG00000030911.6|zona pellucida glycoprotein 2
mm10_v2_chr7_+_41633531_41633603	0.129994	Sox1	ENSMUST00000100275.3|Zfp788|ENSMUSG00000074165.4|zinc finger protein 788 	ENSMUST00000131180.1|Zfp788|ENSMUSG00000074165.4|zinc finger protein 788 	ENSMUST00000140964.1|Zfp788|ENSMUSG00000074165.4|zinc finger protein 788 	ENSMUST00000045720.7|Zfp788|ENSMUSG00000074165.4|zinc finger protein 788 	ENSMUST00000098508.2|Zfp788|ENSMUSG00000074165.4|zinc finger protein 788
mm10_v2_chr14_+_65666430_65666443	0.106077	Sox1	ENSMUST00000069226.6|Scara5|ENSMUSG00000022032.8|scavenger receptor class A, member 5 (putative)
mm10_v2_chr4_-_120747248_120747404	0.105219	Sox1	ENSMUST00000030376.7|Kcnq4|ENSMUSG00000028631.7|potassium voltage-gated channel, subfamily Q, member 4
mm10_v2_chr2_-_84650714_84650749	0.104698	Sox1	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr2_-_84650760_84650771	0.10314	Sox1	ENSMUST00000111691.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr10_+_84756055_84756084	0.0978956	Sox1	ENSMUST00000060397.6|Rfx4|ENSMUSG00000020037.9|regulatory factor X, 4 (influences HLA class II expression)
mm10_v2_chr6_+_117841174_117841254	0.0943659	Sox1	ENSMUST00000112859.1|Zfp637|ENSMUSG00000059689.8|zinc finger protein 637 	ENSMUST00000137224.1|Zfp637|ENSMUSG00000059689.8|zinc finger protein 637 	ENSMUST00000164472.1|Zfp637|ENSMUSG00000059689.8|zinc finger protein 637 	ENSMUST00000112861.1|Zfp637|ENSMUSG00000059689.8|zinc finger protein 637 	ENSMUST00000035638.8|Zfp637|ENSMUSG00000059689.8|zinc finger protein 637
mm10_v2_chr4_-_43483696_43483734	0.0877208	Sox1	ENSMUST00000030180.6|Sit1|ENSMUSG00000028460.6|suppression inducing transmembrane adaptor 1
mm10_v2_chr13_-_95478655_95478655	0.0860862	Sox1	ENSMUST00000022186.3|S100z|ENSMUSG00000021679.3|S100 calcium binding protein, zeta
mm10_v2_chr7_-_46919915_46919986	0.0823467	Sox1	ENSMUST00000143413.1|Tsg101|ENSMUSG00000014402.8|tumor susceptibility gene 101 	ENSMUST00000014546.8|Tsg101|ENSMUSG00000014402.8|tumor susceptibility gene 101
mm10_v2_chr4_+_136357423_136357541	0.0810702	Sox1	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr11_+_96134219_96134219	0.0768909	Sox1	ENSMUST00000107680.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr6_-_145434925_145434953	0.0619514	Sox1	ENSMUST00000111708.2|Ifltd1|ENSMUSG00000054966.7|intermediate filament tail domain containing 1
mm10_v2_chr17_-_47692466_47692466	0.0303193	Sox1	ENSMUST00000113300.1|Prickle4|ENSMUSG00000096549.3|prickle homolog 4 (Drosophila)
mm10_v2_chr11_+_104282371_104282392	0.0226843	Sox1	ENSMUST00000106988.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau 	ENSMUST00000106989.1|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
