mm10_v2_chr4_-_129121889_129122063	3.99802	Sox2	ENSMUST00000139450.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000125931.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000116444.2|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr4_-_148130678_148130706	3.20139	Sox2	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr7_+_29303958_29303983	2.74706	Sox2	ENSMUST00000049977.6|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr7_+_29303938_29303951	2.59883	Sox2	ENSMUST00000108231.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr6_-_87335758_87335775	2.4741	Sox2	ENSMUST00000042025.9|Antxr1|ENSMUSG00000033420.10|anthrax toxin receptor 1
mm10_v2_chr8_-_33747724_33747781	2.47335	Sox2	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr5_-_136244865_136244908	2.36156	Sox2	ENSMUST00000005188.9|Sh2b2|ENSMUSG00000005057.9|SH2B adaptor protein 2
mm10_v2_chr19_+_44992127_44992136	2.29016	Sox2	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chrX_+_48519245_48519285	2.00975	Sox2	ENSMUST00000033430.2|Rab33a|ENSMUSG00000031104.2|RAB33A, member of RAS oncogene family
mm10_v2_chrX_-_48034842_48034858	1.96399	Sox2	ENSMUST00000039026.7|Apln|ENSMUSG00000037010.7|apelin
mm10_v2_chr17_+_12119274_12119348	1.95793	Sox2	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr11_+_78301529_78301606	1.92099	Sox2	ENSMUST00000045026.3|Spag5|ENSMUSG00000002055.3|sperm associated antigen 5
mm10_v2_chr4_-_32923455_32923530	1.91959	Sox2	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr4_+_48585276_48585365	1.88409	Sox2	ENSMUST00000123476.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr17_-_31129602_31129646	1.85526	Sox2	ENSMUST00000024827.4|Tff3|ENSMUSG00000024029.4|trefoil factor 3, intestinal
mm10_v2_chr13_+_51645232_51645276	1.80534	Sox2	ENSMUST00000075853.5|Cks2|ENSMUSG00000062248.5|CDC28 protein kinase regulatory subunit 2
mm10_v2_chr12_-_103863551_103863630	1.79427	Sox2	ENSMUST00000085056.6|Serpina1a|ENSMUSG00000066366.8|serine (or cysteine) peptidase inhibitor, clade A, member 1A 	ENSMUST00000072876.5|Serpina1a|ENSMUSG00000066366.8|serine (or cysteine) peptidase inhibitor, clade A, member 1A 	ENSMUST00000124717.1|Serpina1a|ENSMUSG00000066366.8|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm10_v2_chr5_+_120649188_120649259	1.79424	Sox2	ENSMUST00000156722.1|Rasal1|ENSMUSG00000029602.5|RAS protein activator like 1 (GAP1 like)
mm10_v2_chr3_-_108402589_108402589	1.7666	Sox2	ENSMUST00000147565.1|Celsr2|ENSMUSG00000068740.7|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm10_v2_chr7_+_4782940_4782959	1.7072	Sox2	ENSMUST00000013235.4|Tmem190|ENSMUSG00000013091.4|transmembrane protein 190
mm10_v2_chr12_-_103904887_103904955	1.70697	Sox2	ENSMUST00000074051.5|Serpina1c|ENSMUSG00000079015.2|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm10_v2_chr6_-_148944750_148944826	1.70009	Sox2	ENSMUST00000111562.1|Fam60a|ENSMUSG00000039985.8|family with sequence similarity 60, member A 	ENSMUST00000081956.5|Fam60a|ENSMUSG00000039985.8|family with sequence similarity 60, member A
mm10_v2_chr7_+_29309429_29309513	1.69382	Sox2	ENSMUST00000137848.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr12_-_54986363_54986529	1.67181	Sox2	ENSMUST00000173433.1|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A 	ENSMUST00000173803.1|Gm20403|ENSMUSG00000092233.1|predicted gene 20403
mm10_v2_chr15_-_79441802_79441860	1.66415	Sox2	ENSMUST00000122044.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon 	ENSMUST00000135519.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon
mm10_v2_chr2_+_3713478_3713500	1.65567	Sox2	ENSMUST00000115053.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr13_-_55488038_55488111	1.65226	Sox2	ENSMUST00000109921.2|Dbn1|ENSMUSG00000034675.11|drebrin 1 	ENSMUST00000109923.2|Dbn1|ENSMUSG00000034675.11|drebrin 1 	ENSMUST00000021950.8|Dbn1|ENSMUSG00000034675.11|drebrin 1
mm10_v2_chr2_+_3713449_3713474	1.65187	Sox2	ENSMUST00000027965.4|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr4_+_48585135_48585187	1.58044	Sox2	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr11_-_31370066_31370080	1.57501	Sox2	ENSMUST00000020546.2|Stc2|ENSMUSG00000020303.2|stanniocalcin 2
mm10_v2_chrX_-_104201126_104201185	1.57138	Sox2	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr4_-_130574150_130574237	1.56959	Sox2	ENSMUST00000105993.3|Nkain1|ENSMUSG00000078532.3|Na+/K+ transporting ATPase interacting 1
mm10_v2_chr15_+_82275197_82275281	1.55814	Sox2	ENSMUST00000116423.1|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chr1_+_180641330_180641374	1.53352	Sox2	ENSMUST00000085804.5|Lin9|ENSMUSG00000058729.7|lin-9 homolog (C. elegans)
mm10_v2_chr14_-_31019055_31019089	1.52646	Sox2	ENSMUST00000037739.6|Gnl3|ENSMUSG00000042354.6|guanine nucleotide binding protein-like 3 (nucleolar)
mm10_v2_chr7_+_141061274_141061311	1.51831	Sox2	ENSMUST00000048002.5|B4galnt4|ENSMUSG00000055629.4|beta-1,4-N-acetyl-galactosaminyl transferase 4
mm10_v2_chr15_-_79441999_79442065	1.51155	Sox2	ENSMUST00000117786.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon 	ENSMUST00000120859.1|Csnk1e|ENSMUSG00000022433.12|casein kinase 1, epsilon
mm10_v2_chr7_+_29307924_29308057	1.50667	Sox2	ENSMUST00000108230.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1 	ENSMUST00000065181.5|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr12_-_103773592_103773610	1.48008	Sox2	ENSMUST00000078869.5|Serpina1d|ENSMUSG00000071177.4|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm10_v2_chr6_-_83527452_83527500	1.45016	Sox2	ENSMUST00000141904.1|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr10_+_80151154_80151375	1.44647	Sox2	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr12_-_54986328_54986342	1.41754	Sox2	ENSMUST00000038926.6|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A
mm10_v2_chr7_+_46397648_46397783	1.41533	Sox2	ENSMUST00000160433.1|Kcnc1|ENSMUSG00000058975.6|potassium voltage gated channel, Shaw-related subfamily, member 1
mm10_v2_chr5_-_38159457_38159491	1.41495	Sox2	ENSMUST00000031009.4|Nsg1|ENSMUSG00000029126.4|neuron specific gene family member 1
mm10_v2_chr3_-_84040151_84040171	1.39908	Sox2	ENSMUST00000052342.7|D930015E06Rik|ENSMUSG00000033767.9|RIKEN cDNA D930015E06 gene
mm10_v2_chr15_+_82274935_82275034	1.37861	Sox2	ENSMUST00000023095.6|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chr7_+_140968028_140968047	1.37118	Sox2	ENSMUST00000106040.1|Ifitm1|ENSMUSG00000025491.8|interferon induced transmembrane protein 1 	ENSMUST00000026564.8|Ifitm1|ENSMUSG00000025491.8|interferon induced transmembrane protein 1
mm10_v2_chr12_-_103738158_103738158	1.36578	Sox2	ENSMUST00000095450.4|Serpina1b|ENSMUSG00000071178.5|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm10_v2_chr1_+_158362261_158362304	1.35803	Sox2	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr2_+_55437100_55437182	1.35017	Sox2	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr16_+_17146937_17146985	1.34502	Sox2	ENSMUST00000115706.1|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial) 	ENSMUST00000069064.4|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial)
mm10_v2_chr4_+_48585193_48585215	1.33574	Sox2	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr11_+_3330781_3330812	1.31513	Sox2	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr11_-_87108656_87108719	1.29375	Sox2	ENSMUST00000051395.8|Prr11|ENSMUSG00000020493.8|proline rich 11
mm10_v2_chr2_-_11502025_11502049	1.28382	Sox2	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr2_-_65567505_65567627	1.2788	Sox2	ENSMUST00000100069.2|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr8_+_123411424_123411562	1.26648	Sox2	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr11_-_77489666_77489687	1.2639	Sox2	ENSMUST00000037593.7|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b 	ENSMUST00000092892.3|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b
mm10_v2_chr7_+_82174796_82174825	1.25814	Sox2	ENSMUST00000032874.7|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr19_-_40271506_40271616	1.25342	Sox2	ENSMUST00000068439.6|Pdlim1|ENSMUSG00000055044.6|PDZ and LIM domain 1 (elfin)
mm10_v2_chr2_-_51149100_51149115	1.21827	Sox2	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr18_-_43059418_43059471	1.21752	Sox2	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chrX_-_104201099_104201117	1.21713	Sox2	ENSMUST00000087879.4|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr14_+_3412614_3412614	1.19793	Sox2	ENSMUST00000170123.1|Gm10409|ENSMUSG00000096488.1|predicted gene 10409
mm10_v2_chr5_-_142550965_142551110	1.1924	Sox2	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr1_+_6734827_6734874	1.1911	Sox2	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr1_+_139454747_139454825	1.18906	Sox2	ENSMUST00000053364.8|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila) 	ENSMUST00000097554.3|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm10_v2_chr8_+_11312805_11312887	1.18451	Sox2	ENSMUST00000033899.7|Col4a2|ENSMUSG00000031503.7|collagen, type IV, alpha 2
mm10_v2_chrX_-_16911774_16911774	1.16437	Sox2	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr2_-_65567465_65567495	1.16271	Sox2	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr16_+_17070220_17070239	1.15873	Sox2	ENSMUST00000141959.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr11_-_78165521_78165589	1.15737	Sox2	ENSMUST00000017530.3|Traf4|ENSMUSG00000017386.4|TNF receptor associated factor 4
mm10_v2_chr5_+_30711564_30711586	1.12863	Sox2	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr1_-_12991109_12991177	1.12642	Sox2	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr4_+_136172367_136172395	1.12602	Sox2	ENSMUST00000061721.5|E2f2|ENSMUSG00000018983.9|E2F transcription factor 2
mm10_v2_chr5_+_30711849_30711905	1.12525	Sox2	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr16_-_4559720_4559747	1.12455	Sox2	ENSMUST00000005862.7|Tfap4|ENSMUSG00000005718.7|transcription factor AP4
mm10_v2_chr5_-_138171248_138171274	1.12325	Sox2	ENSMUST00000153867.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr19_+_5024006_5024155	1.11769	Sox2	ENSMUST00000025826.5|Slc29a2|ENSMUSG00000024891.5|solute carrier family 29 (nucleoside transporters), member 2
mm10_v2_chr8_+_124793013_124793056	1.10304	Sox2	ENSMUST00000167588.1|Trim67|ENSMUSG00000036913.8|tripartite motif-containing 67
mm10_v2_chr8_-_70120816_70120873	1.083	Sox2	ENSMUST00000002412.8|Ncan|ENSMUSG00000002341.8|neurocan
mm10_v2_chr2_+_181763315_181763335	1.0741	Sox2	ENSMUST00000081125.4|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr17_-_46487641_46487682	1.05572	Sox2	ENSMUST00000047034.8|Ttbk1|ENSMUSG00000015599.8|tau tubulin kinase 1
mm10_v2_chr11_+_96323253_96323326	1.05365	Sox2	ENSMUST00000093944.3|Hoxb3|ENSMUSG00000048763.5|homeobox B3
mm10_v2_chr14_+_3049285_3049285	1.05264	Sox2	ENSMUST00000166494.1|Gm2897|ENSMUSG00000079410.4|predicted gene 2897
mm10_v2_chr18_+_4994600_4994623	1.05097	Sox2	ENSMUST00000140448.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr8_+_69808672_69808742	1.04553	Sox2	ENSMUST00000036074.8|Gmip|ENSMUSG00000036246.8|Gem-interacting protein 	ENSMUST00000123453.1|Gmip|ENSMUSG00000036246.8|Gem-interacting protein
mm10_v2_chr2_+_157560078_157560130	1.03725	Sox2	ENSMUST00000153739.2|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173595.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000109526.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173839.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173041.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000173793.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000172487.1|Nnat|ENSMUSG00000067786.10|neuronatin 	ENSMUST00000088484.5|Nnat|ENSMUSG00000067786.10|neuronatin
mm10_v2_chr5_+_26904682_26904710	1.01922	Sox2	ENSMUST00000120555.1|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr18_-_77565050_77565162	1.01576	Sox2	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr8_+_124793061_124793092	1.00655	Sox2	ENSMUST00000041106.7|Trim67|ENSMUSG00000036913.8|tripartite motif-containing 67
mm10_v2_chr18_+_4921662_4921726	1.00452	Sox2	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr6_-_99726392_99726414	1.00437	Sox2	ENSMUST00000032152.8|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000101120.4|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000008273.6|Prok2|ENSMUSG00000030069.9|prokineticin 2
mm10_v2_chr3_-_33082004_33082068	0.995968	Sox2	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr15_-_58324161_58324178	0.993209	Sox2	ENSMUST00000022985.1|Klhl38|ENSMUSG00000022357.2|kelch-like 38
mm10_v2_chr18_+_34625009_34625033	0.99317	Sox2	ENSMUST00000166044.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr5_-_138170992_138171033	0.993121	Sox2	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr5_-_114091358_114091404	0.992343	Sox2	ENSMUST00000150106.1|Svop|ENSMUSG00000042078.8|SV2 related protein
mm10_v2_chr18_-_47368446_47368486	0.983478	Sox2	ENSMUST00000076043.6|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000135790.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr14_+_4334763_4334763	0.971467	Sox2	ENSMUST00000165466.1|2610042L04Rik|ENSMUSG00000079388.3|RIKEN cDNA 2610042L04 gene
mm10_v2_chr11_+_115381906_115381933	0.97086	Sox2	ENSMUST00000053288.5|Cdr2l|ENSMUSG00000050910.5|cerebellar degeneration-related protein 2-like
mm10_v2_chr18_+_34624621_34624629	0.963921	Sox2	ENSMUST00000167161.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr4_+_154960915_154960930	0.953573	Sox2	ENSMUST00000049621.6|Hes5|ENSMUSG00000048001.7|hairy and enhancer of split 5 (Drosophila)
mm10_v2_chr4_+_134468320_134468409	0.953289	Sox2	ENSMUST00000030636.4|Stmn1|ENSMUSG00000028832.5|stathmin 1 	ENSMUST00000127279.1|Stmn1|ENSMUSG00000028832.5|stathmin 1 	ENSMUST00000105867.1|Stmn1|ENSMUSG00000028832.5|stathmin 1
mm10_v2_chr5_+_105415738_105415849	0.942394	Sox2	ENSMUST00000112707.1|Lrrc8b|ENSMUSG00000070639.4|leucine rich repeat containing 8 family, member B
mm10_v2_chr8_-_84773381_84773427	0.93724	Sox2	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr18_+_36760214_36760292	0.923392	Sox2	ENSMUST00000049323.7|Wdr55|ENSMUSG00000042660.7|WD repeat domain 55
mm10_v2_chr10_+_45067167_45067279	0.920547	Sox2	ENSMUST00000099858.2|Prep|ENSMUSG00000019849.10|prolyl endopeptidase
mm10_v2_chr10_-_49788743_49788769	0.914026	Sox2	ENSMUST00000105483.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105487.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr1_+_66321708_66321719	0.912779	Sox2	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr10_+_57784914_57784939	0.906585	Sox2	ENSMUST00000165013.1|Fabp7|ENSMUSG00000019874.5|fatty acid binding protein 7, brain
mm10_v2_chr5_-_112228934_112228975	0.904669	Sox2	ENSMUST00000181535.2|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr2_-_11502090_11502126	0.900414	Sox2	ENSMUST00000179584.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000170196.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000171188.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114845.3|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114844.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000100411.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr7_-_47132698_47132717	0.900223	Sox2	ENSMUST00000033142.5|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr16_+_17070281_17070320	0.89817	Sox2	ENSMUST00000090199.3|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr3_-_89338005_89338066	0.889103	Sox2	ENSMUST00000029674.7|Efna4|ENSMUSG00000028040.7|ephrin A4
mm10_v2_chr16_+_17070127_17070215	0.885398	Sox2	ENSMUST00000115729.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr1_+_158362330_158362411	0.88063	Sox2	ENSMUST00000170718.1|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr7_+_100493337_100493370	0.880021	Sox2	ENSMUST00000126534.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr5_+_90931196_90931311	0.872588	Sox2	ENSMUST00000071652.4|Mthfd2l|ENSMUSG00000029376.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
mm10_v2_chr6_-_50382831_50382847	0.872386	Sox2	ENSMUST00000114468.2|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chr10_+_127165118_127165225	0.869742	Sox2	ENSMUST00000006914.9|B4galnt1|ENSMUSG00000006731.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm10_v2_chr6_-_39557830_39557867	0.868433	Sox2	ENSMUST00000036877.3|Dennd2a|ENSMUSG00000038456.3|DENN/MADD domain containing 2A 	ENSMUST00000154149.1|Dennd2a|ENSMUSG00000038456.3|DENN/MADD domain containing 2A
mm10_v2_chr10_+_87058043_87058067	0.865978	Sox2	ENSMUST00000169849.1|1700113H08Rik|ENSMUSG00000047129.5|RIKEN cDNA 1700113H08 gene
mm10_v2_chr19_-_46327121_46327156	0.860671	Sox2	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr2_-_152951456_152951540	0.856247	Sox2	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr8_-_4259257_4259283	0.847426	Sox2	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr2_+_31950257_31950281	0.845692	Sox2	ENSMUST00000001920.7|Aif1l|ENSMUSG00000001864.7|allograft inflammatory factor 1-like
mm10_v2_chr10_+_76147451_76147515	0.844688	Sox2	ENSMUST00000020450.3|Slc5a4a|ENSMUSG00000020229.4|solute carrier family 5, member 4a
mm10_v2_chr9_+_102718424_102718490	0.842964	Sox2	ENSMUST00000156485.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2 	ENSMUST00000145937.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2 	ENSMUST00000134483.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr8_+_70493156_70493167	0.840262	Sox2	ENSMUST00000008032.7|Crlf1|ENSMUSG00000007888.9|cytokine receptor-like factor 1
mm10_v2_chr2_-_64975762_64975795	0.838743	Sox2	ENSMUST00000156765.1|Grb14|ENSMUSG00000026888.8|growth factor receptor bound protein 14
mm10_v2_chr7_+_64502090_64502155	0.83749	Sox2	ENSMUST00000137732.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr15_-_75905349_75905388	0.837411	Sox2	ENSMUST00000127550.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr5_+_142702091_142702153	0.837411	Sox2	ENSMUST00000058418.7|Slc29a4|ENSMUSG00000050822.7|solute carrier family 29 (nucleoside transporters), member 4
mm10_v2_chr17_-_35838208_35838243	0.832837	Sox2	ENSMUST00000134978.2|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr9_-_44721383_44721484	0.831144	Sox2	ENSMUST00000148929.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000123406.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr2_+_156065180_156065282	0.828835	Sox2	ENSMUST00000038860.5|Spag4|ENSMUSG00000038180.5|sperm associated antigen 4
mm10_v2_chr2_+_155611175_155611216	0.827163	Sox2	ENSMUST00000092995.5|Myh7b|ENSMUSG00000074652.3|myosin, heavy chain 7B, cardiac muscle, beta
mm10_v2_chr14_-_51913393_51913488	0.825886	Sox2	ENSMUST00000004673.7|Ndrg2|ENSMUSG00000004558.8|N-myc downstream regulated gene 2 	ENSMUST00000111632.3|Ndrg2|ENSMUSG00000004558.8|N-myc downstream regulated gene 2
mm10_v2_chr5_-_138171216_138171246	0.825274	Sox2	ENSMUST00000147920.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr19_-_10869757_10869940	0.823931	Sox2	ENSMUST00000120524.1|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A 	ENSMUST00000025645.7|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A
mm10_v2_chr9_-_44735189_44735213	0.821881	Sox2	ENSMUST00000034611.8|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr10_+_7667503_7667558	0.820186	Sox2	ENSMUST00000040135.8|Nup43|ENSMUSG00000040034.9|nucleoporin 43
mm10_v2_chr16_+_5146985_5147109	0.818736	Sox2	ENSMUST00000165810.1|Sec14l5|ENSMUSG00000091712.1|SEC14-like 5 (S. cerevisiae)
mm10_v2_chr7_+_140967221_140967362	0.814261	Sox2	ENSMUST00000106042.2|Ifitm1|ENSMUSG00000025491.8|interferon induced transmembrane protein 1
mm10_v2_chr7_-_141429351_141429429	0.806032	Sox2	ENSMUST00000164387.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000137488.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000084436.3|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chr14_-_6287250_6287250	0.805416	Sox2	ENSMUST00000170104.2|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr4_+_129513581_129513644	0.804277	Sox2	ENSMUST00000062356.6|Marcksl1|ENSMUSG00000047945.6|MARCKS-like 1
mm10_v2_chr1_+_135584773_135584773	0.796583	Sox2	ENSMUST00000067468.4|Gm4793|ENSMUSG00000054412.4|predicted gene 4793
mm10_v2_chr12_+_40446050_40446099	0.795902	Sox2	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr10_+_107271827_107271850	0.793416	Sox2	ENSMUST00000020057.8|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans) 	ENSMUST00000105280.3|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans)
mm10_v2_chr3_-_88762244_88762384	0.792531	Sox2	ENSMUST00000183267.1|Syt11|ENSMUSG00000068923.8|synaptotagmin XI
mm10_v2_chr2_-_11502067_11502080	0.786911	Sox2	ENSMUST00000028114.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000049849.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr13_+_49504774_49504816	0.783122	Sox2	ENSMUST00000051504.7|Ecm2|ENSMUSG00000043631.7|extracellular matrix protein 2, female organ and adipocyte specific
mm10_v2_chr10_-_29144194_29144194	0.781954	Sox2	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr1_-_163313661_163313710	0.779739	Sox2	ENSMUST00000174397.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000075805.6|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000027878.7|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr7_+_82867327_82867357	0.779722	Sox2	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chrX_+_159459125_159459165	0.777912	Sox2	ENSMUST00000043151.5|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2 	ENSMUST00000112470.1|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2 	ENSMUST00000156172.1|Map7d2|ENSMUSG00000041020.8|MAP7 domain containing 2
mm10_v2_chr1_-_38821215_38821215	0.771392	Sox2	ENSMUST00000039612.4|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr5_-_123182704_123182731	0.767628	Sox2	ENSMUST00000154713.1|Hpd|ENSMUSG00000029445.7|4-hydroxyphenylpyruvic acid dioxygenase 	ENSMUST00000031398.7|Hpd|ENSMUSG00000029445.7|4-hydroxyphenylpyruvic acid dioxygenase
mm10_v2_chr14_+_5501674_5501674	0.76136	Sox2	ENSMUST00000181562.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr3_-_95228636_95228719	0.759929	Sox2	ENSMUST00000065482.5|Mllt11|ENSMUSG00000053192.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm10_v2_chr18_-_47368830_47368878	0.75203	Sox2	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr2_-_26208281_26208293	0.749192	Sox2	ENSMUST00000054099.9|Lhx3|ENSMUSG00000026934.9|LIM homeobox protein 3
mm10_v2_chr8_+_36094828_36094868	0.74456	Sox2	ENSMUST00000110492.1|D8Ertd82e|ENSMUSG00000050271.6|DNA segment, Chr 8, ERATO Doi 82, expressed
mm10_v2_chr14_-_49783327_49783394	0.744447	Sox2	ENSMUST00000118129.1|3632451O06Rik|ENSMUSG00000036242.8|RIKEN cDNA 3632451O06 gene 	ENSMUST00000036972.6|3632451O06Rik|ENSMUSG00000036242.8|RIKEN cDNA 3632451O06 gene
mm10_v2_chr19_-_46039621_46039662	0.740503	Sox2	ENSMUST00000056931.7|Ldb1|ENSMUSG00000025223.8|LIM domain binding 1
mm10_v2_chr6_+_17749170_17749265	0.735806	Sox2	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr8_+_85432686_85432686	0.730929	Sox2	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr14_+_4415448_4415448	0.729663	Sox2	ENSMUST00000168866.1|Gm3164|ENSMUSG00000091418.2|predicted gene 3164
mm10_v2_chr2_-_25983056_25983154	0.728433	Sox2	ENSMUST00000127823.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000134882.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr17_-_70851189_70851216	0.723303	Sox2	ENSMUST00000059775.8|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chrX_-_105929333_105929382	0.722313	Sox2	ENSMUST00000134507.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000137453.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000150914.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr1_-_93342734_93342803	0.72153	Sox2	ENSMUST00000027493.3|Pask|ENSMUSG00000026274.5|PAS domain containing serine/threonine kinase
mm10_v2_chr4_-_34882919_34882964	0.719352	Sox2	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr5_+_37245792_37245883	0.716295	Sox2	ENSMUST00000031004.7|Crmp1|ENSMUSG00000029121.9|collapsin response mediator protein 1
mm10_v2_chr11_-_97629685_97629716	0.715024	Sox2	ENSMUST00000052281.4|E130012A19Rik|ENSMUSG00000043439.4|RIKEN cDNA E130012A19 gene
mm10_v2_chr17_-_35838259_35838306	0.713778	Sox2	ENSMUST00000001566.8|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr19_-_35924488_35924578	0.711819	Sox2	ENSMUST00000178904.1|A830019P07Rik|ENSMUSG00000094707.1|RIKEN cDNA A830019P07 gene
mm10_v2_chr11_+_69846665_69846681	0.709949	Sox2	ENSMUST00000019605.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr3_+_68572245_68572392	0.70409	Sox2	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr8_-_84937347_84937367	0.7006	Sox2	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr12_-_34528844_34528904	0.689368	Sox2	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr16_-_57754707_57754737	0.686855	Sox2	ENSMUST00000089332.4|Col8a1|ENSMUSG00000068196.4|collagen, type VIII, alpha 1
mm10_v2_chr17_+_8182247_8182247	0.683517	Sox2	ENSMUST00000161898.1|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr18_+_11633276_11633357	0.680348	Sox2	ENSMUST00000115861.2|Rbbp8|ENSMUSG00000041238.9|retinoblastoma binding protein 8
mm10_v2_chr12_-_26415256_26415303	0.677589	Sox2	ENSMUST00000020971.6|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A 	ENSMUST00000062149.4|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A
mm10_v2_chr10_+_34389974_34389990	0.675254	Sox2	ENSMUST00000105511.1|Col10a1|ENSMUSG00000039462.4|collagen, type X, alpha 1
mm10_v2_chr13_-_54749849_54749893	0.674974	Sox2	ENSMUST00000135343.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chrX_+_93675088_93675161	0.672531	Sox2	ENSMUST00000045898.3|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr6_-_121003099_121003153	0.67136	Sox2	ENSMUST00000098457.2|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENSMUST00000150503.1|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3
mm10_v2_chr6_+_15185456_15185563	0.669529	Sox2	ENSMUST00000115472.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115474.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000031545.7|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000137628.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr17_-_35673517_35673700	0.669149	Sox2	ENSMUST00000162266.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160734.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000159852.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160039.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr2_+_68117713_68117713	0.667131	Sox2	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr9_-_37147257_37147323	0.66672	Sox2	ENSMUST00000039674.5|Pknox2|ENSMUSG00000035934.9|Pbx/knotted 1 homeobox 2 	ENSMUST00000080754.5|Pknox2|ENSMUSG00000035934.9|Pbx/knotted 1 homeobox 2
mm10_v2_chr8_+_11728105_11728143	0.662567	Sox2	ENSMUST00000110909.2|Arhgef7|ENSMUSG00000031511.8|Rho guanine nucleotide exchange factor (GEF7) 	ENSMUST00000033908.6|Arhgef7|ENSMUSG00000031511.8|Rho guanine nucleotide exchange factor (GEF7)
mm10_v2_chr2_+_147012996_147013083	0.660786	Sox2	ENSMUST00000028921.5|Xrn2|ENSMUSG00000027433.5|5'-3' exoribonuclease 2
mm10_v2_chr9_+_77754526_77754541	0.660373	Sox2	ENSMUST00000034905.8|Gclc|ENSMUSG00000032350.8|glutamate-cysteine ligase, catalytic subunit
mm10_v2_chrX_+_153139941_153140011	0.659918	Sox2	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chr11_+_3649759_3649759	0.657943	Sox2	ENSMUST00000140242.1|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr3_-_107931579_107931742	0.657389	Sox2	ENSMUST00000133947.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000124215.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106688.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106687.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr11_-_78497734_78497793	0.654394	Sox2	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr19_-_30175414_30175436	0.654129	Sox2	ENSMUST00000025778.7|Gldc|ENSMUSG00000024827.9|glycine decarboxylase
mm10_v2_chrX_+_134585644_134585698	0.650522	Sox2	ENSMUST00000113211.1|Rpl36a|ENSMUSG00000079435.3|ribosomal protein L36A
mm10_v2_chr14_+_69029289_69029414	0.648232	Sox2	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr13_+_60602182_60602231	0.647793	Sox2	ENSMUST00000044083.7|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chr7_+_100493795_100493848	0.64695	Sox2	ENSMUST00000129324.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr1_+_66386968_66386999	0.642207	Sox2	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr9_-_78480736_78480841	0.641468	Sox2	ENSMUST00000156988.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr7_-_45204892_45204892	0.641172	Sox2	ENSMUST00000121017.2|Ccdc155|ENSMUSG00000038292.12|coiled-coil domain containing 155
mm10_v2_chr1_+_107361929_107361929	0.639061	Sox2	ENSMUST00000027566.2|Serpinb11|ENSMUSG00000026327.2|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm10_v2_chr4_+_9269285_9269335	0.636168	Sox2	ENSMUST00000038841.7|Clvs1|ENSMUSG00000041216.9|clavesin 1
mm10_v2_chr10_+_57784859_57784903	0.635615	Sox2	ENSMUST00000020024.5|Fabp7|ENSMUSG00000019874.5|fatty acid binding protein 7, brain
mm10_v2_chr9_+_74976096_74976177	0.63521	Sox2	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr14_-_62292959_62293019	0.635124	Sox2	ENSMUST00000063169.8|Dleu7|ENSMUSG00000048281.8|deleted in lymphocytic leukemia, 7
mm10_v2_chr14_-_79771305_79771318	0.633012	Sox2	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr5_+_33983534_33983548	0.631309	Sox2	ENSMUST00000114382.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chrX_-_105929206_105929321	0.631191	Sox2	ENSMUST00000134381.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000154866.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr10_+_93831555_93831555	0.631066	Sox2	ENSMUST00000095333.4|Usp44|ENSMUSG00000020020.7|ubiquitin specific peptidase 44
mm10_v2_chr2_-_152951547_152951608	0.62644	Sox2	ENSMUST00000037715.6|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr6_-_47594967_47595047	0.625101	Sox2	ENSMUST00000081721.6|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114618.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114616.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila)
mm10_v2_chr7_+_16875302_16875392	0.623412	Sox2	ENSMUST00000108493.1|Dact3|ENSMUSG00000078794.3|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm10_v2_chr7_-_142095266_142095306	0.62302	Sox2	ENSMUST00000039926.3|Dusp8|ENSMUSG00000037887.5|dual specificity phosphatase 8
mm10_v2_chr13_-_49147931_49148037	0.620776	Sox2	ENSMUST00000162581.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110097.2|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000049265.8|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000035538.6|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110096.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000091623.3|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2
mm10_v2_chr6_-_136781718_136781806	0.620523	Sox2	ENSMUST00000078095.6|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c 	ENSMUST00000032338.7|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c
mm10_v2_chr17_-_35000848_35000958	0.618262	Sox2	ENSMUST00000166828.3|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr1_+_181150926_181150984	0.61722	Sox2	ENSMUST00000134115.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila) 	ENSMUST00000111059.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila)
mm10_v2_chrX_+_71556874_71556946	0.616754	Sox2	ENSMUST00000123100.1|Hmgb3|ENSMUSG00000015217.5|high mobility group box 3
mm10_v2_chr6_-_87388878_87388935	0.616158	Sox2	ENSMUST00000032127.4|Gkn3|ENSMUSG00000030048.4|gastrokine 3
mm10_v2_chr14_-_7568566_7568566	0.616054	Sox2	ENSMUST00000163790.1|Gm3558|ENSMUSG00000079364.3|predicted gene 3558
mm10_v2_chr2_+_30807826_30807999	0.612638	Sox2	ENSMUST00000041830.3|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1 	ENSMUST00000152374.1|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm10_v2_chr2_-_126675224_126675352	0.611964	Sox2	ENSMUST00000124972.1|Gabpb1|ENSMUSG00000027361.9|GA repeat binding protein, beta 1
mm10_v2_chr9_+_111004811_111004811	0.611623	Sox2	ENSMUST00000080872.4|Gm10030|ENSMUSG00000057802.4|predicted gene 10030
mm10_v2_chr15_-_79742518_79742562	0.610795	Sox2	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr5_-_107687990_107688025	0.610036	Sox2	ENSMUST00000180428.1|Gm26692|ENSMUSG00000097035.1|predicted gene, 26692
mm10_v2_chr5_-_140649018_140649052	0.609486	Sox2	ENSMUST00000042661.3|Ttyh3|ENSMUSG00000036565.3|tweety homolog 3 (Drosophila)
mm10_v2_chr11_-_106579111_106579141	0.60904	Sox2	ENSMUST00000103070.2|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr7_+_45335256_45335297	0.604932	Sox2	ENSMUST00000085351.4|Hrc|ENSMUSG00000038239.9|histidine rich calcium binding protein
mm10_v2_chr4_+_47208005_47208161	0.602044	Sox2	ENSMUST00000082303.6|Col15a1|ENSMUSG00000028339.11|collagen, type XV, alpha 1 	ENSMUST00000102917.4|Col15a1|ENSMUSG00000028339.11|collagen, type XV, alpha 1
mm10_v2_chr3_+_88532314_88532396	0.600792	Sox2	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chr11_-_98022594_98022671	0.599048	Sox2	ENSMUST00000103144.3|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000017552.6|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000092736.4|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000107562.1|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr1_+_6730135_6730176	0.598801	Sox2	ENSMUST00000155921.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr10_+_41476314_41476392	0.595507	Sox2	ENSMUST00000119962.1|Mical1|ENSMUSG00000019823.11|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENSMUST00000019967.9|Mical1|ENSMUSG00000019823.11|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENSMUST00000099934.4|Mical1|ENSMUSG00000019823.11|microtubule associated monooxygenase, calponin and LIM domain containing 1
mm10_v2_chr2_-_25983236_25983290	0.595442	Sox2	ENSMUST00000114167.2|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000091268.4|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000183461.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr12_-_98737405_98737515	0.593075	Sox2	ENSMUST00000170188.1|Ptpn21|ENSMUSG00000021009.8|protein tyrosine phosphatase, non-receptor type 21
mm10_v2_chr7_+_4925802_4925868	0.592751	Sox2	ENSMUST00000057612.7|Ssc5d|ENSMUSG00000035279.7|scavenger receptor cysteine rich domain containing (5 domains)
mm10_v2_chr4_-_91376433_91376477	0.589036	Sox2	ENSMUST00000107109.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107111.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107120.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr9_+_95637601_95637632	0.58883	Sox2	ENSMUST00000015498.8|Pcolce2|ENSMUSG00000015354.8|procollagen C-endopeptidase enhancer 2
mm10_v2_chr1_+_171250416_171250433	0.588298	Sox2	ENSMUST00000111315.1|Adamts4|ENSMUSG00000006403.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 	ENSMUST00000006570.5|Adamts4|ENSMUSG00000006403.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4
mm10_v2_chr11_+_16951371_16951417	0.588033	Sox2	ENSMUST00000109635.1|Fbxo48|ENSMUSG00000044966.4|F-box protein 48 	ENSMUST00000061327.1|Fbxo48|ENSMUSG00000044966.4|F-box protein 48
mm10_v2_chr4_-_132345686_132345708	0.587938	Sox2	ENSMUST00000030726.6|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr18_+_68300351_68300422	0.583482	Sox2	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chr1_+_87404916_87404964	0.580271	Sox2	ENSMUST00000173152.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2 	ENSMUST00000173663.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr5_-_112228633_112228680	0.577821	Sox2	ENSMUST00000182699.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding) 	ENSMUST00000182258.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding) 	ENSMUST00000183036.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr11_-_96005872_96005952	0.577589	Sox2	ENSMUST00000013559.2|Igf2bp1|ENSMUSG00000013415.3|insulin-like growth factor 2 mRNA binding protein 1
mm10_v2_chr7_+_5057161_5057197	0.577212	Sox2	ENSMUST00000045543.5|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr3_+_37639945_37639964	0.576861	Sox2	ENSMUST00000108109.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila) 	ENSMUST00000038569.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila)
mm10_v2_chr2_+_72297895_72297912	0.57221	Sox2	ENSMUST00000144111.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr7_-_116038734_116038750	0.56923	Sox2	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr5_+_52363925_52363955	0.568952	Sox2	ENSMUST00000101208.4|Sod3|ENSMUSG00000072941.4|superoxide dismutase 3, extracellular
mm10_v2_chr11_-_78497458_78497539	0.568771	Sox2	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr9_+_21029373_21029442	0.566508	Sox2	ENSMUST00000001040.5|Icam4|ENSMUSG00000001014.5|intercellular adhesion molecule 4, Landsteiner-Wiener blood group
mm10_v2_chr10_-_117063764_117063814	0.56603	Sox2	ENSMUST00000047672.7|Cct2|ENSMUSG00000034024.7|chaperonin containing Tcp1, subunit 2 (beta)
mm10_v2_chr7_+_5056706_5056741	0.565805	Sox2	ENSMUST00000144802.1|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr2_+_138278481_138278531	0.560926	Sox2	ENSMUST00000075410.4|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr12_+_29938036_29938059	0.559174	Sox2	ENSMUST00000122328.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila) 	ENSMUST00000118321.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila)
mm10_v2_chr19_-_5894100_5894155	0.558585	Sox2	ENSMUST00000055911.4|Tigd3|ENSMUSG00000044390.4|tigger transposable element derived 3
mm10_v2_chr4_-_132345715_132345747	0.555944	Sox2	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr7_+_130692532_130692575	0.55489	Sox2	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr12_-_101028983_101029042	0.553753	Sox2	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr3_-_49757257_49757316	0.552791	Sox2	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr3_+_37639985_37640080	0.552786	Sox2	ENSMUST00000108107.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila)
mm10_v2_chr3_+_96830069_96830115	0.549978	Sox2	ENSMUST00000058865.7|Pdzk1|ENSMUSG00000038298.8|PDZ domain containing 1
mm10_v2_chr8_-_11312731_11312826	0.547255	Sox2	ENSMUST00000033898.9|Col4a1|ENSMUSG00000031502.9|collagen, type IV, alpha 1
mm10_v2_chr5_-_34169409_34169466	0.540523	Sox2	ENSMUST00000060049.6|Haus3|ENSMUSG00000079555.1|HAUS augmin-like complex, subunit 3 	ENSMUST00000042954.7|Poln|ENSMUSG00000045102.8|DNA polymerase N
mm10_v2_chr10_-_39163794_39163794	0.538824	Sox2	ENSMUST00000076713.4|Wisp3|ENSMUSG00000062074.6|WNT1 inducible signaling pathway protein 3
mm10_v2_chr3_-_94436574_94436616	0.53656	Sox2	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chr16_-_17125106_17125146	0.53601	Sox2	ENSMUST00000093336.6|2610318N02Rik|ENSMUSG00000049916.9|RIKEN cDNA 2610318N02 gene
mm10_v2_chr16_-_30550560_30550594	0.536008	Sox2	ENSMUST00000140402.1|Tmem44|ENSMUSG00000022537.11|transmembrane protein 44
mm10_v2_chr2_+_167015193_167015336	0.535852	Sox2	ENSMUST00000018143.9|Ddx27|ENSMUSG00000017999.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 	ENSMUST00000176066.1|Ddx27|ENSMUSG00000017999.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 	ENSMUST00000150571.1|Ddx27|ENSMUSG00000017999.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
mm10_v2_chr7_+_16309577_16309641	0.535373	Sox2	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr6_-_83527773_83527810	0.535288	Sox2	ENSMUST00000152029.1|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr17_+_26414820_26414965	0.533635	Sox2	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr17_+_35059035_35059130	0.53111	Sox2	ENSMUST00000007255.6|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2 	ENSMUST00000174493.1|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2
mm10_v2_chr3_+_89215192_89215243	0.530152	Sox2	ENSMUST00000142051.1|Thbs3|ENSMUSG00000028047.5|thrombospondin 3 	ENSMUST00000119084.1|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chr4_-_141599835_141600032	0.529674	Sox2	ENSMUST00000141518.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000127455.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000105784.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000147785.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr4_+_108460000_108460030	0.526768	Sox2	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr11_+_62077018_62077101	0.525606	Sox2	ENSMUST00000092415.5|Specc1|ENSMUSG00000042331.7|sperm antigen with calponin homology and coiled-coil domains 1
mm10_v2_chr9_+_119402444_119402501	0.525294	Sox2	ENSMUST00000035093.8|Acvr2b|ENSMUSG00000061393.7|activin receptor IIB 	ENSMUST00000165044.1|Acvr2b|ENSMUSG00000061393.7|activin receptor IIB
mm10_v2_chr14_+_70530819_70530847	0.524901	Sox2	ENSMUST00000047331.6|Lgi3|ENSMUSG00000033595.6|leucine-rich repeat LGI family, member 3
mm10_v2_chr6_-_67037399_67037417	0.521168	Sox2	ENSMUST00000043098.6|Gadd45a|ENSMUSG00000036390.6|growth arrest and DNA-damage-inducible 45 alpha
mm10_v2_chr3_-_51560816_51560878	0.520727	Sox2	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr6_-_83527986_83527993	0.520142	Sox2	ENSMUST00000121731.1|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr19_-_46039442_46039481	0.518803	Sox2	ENSMUST00000137771.1|Ldb1|ENSMUSG00000025223.8|LIM domain binding 1
mm10_v2_chr7_-_141429433_141429491	0.518657	Sox2	ENSMUST00000124444.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chr15_-_79742493_79742511	0.51664	Sox2	ENSMUST00000100439.3|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr7_+_127233044_127233073	0.515976	Sox2	ENSMUST00000106312.3|Zfp553|ENSMUSG00000045598.9|zinc finger protein 553
mm10_v2_chr4_-_99120898_99120935	0.512242	Sox2	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr17_-_25273155_25273265	0.510602	Sox2	ENSMUST00000173231.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr17_-_25433775_25433790	0.510591	Sox2	ENSMUST00000159610.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000159048.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000078496.5|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm10_v2_chr9_+_58014990_58015013	0.509857	Sox2	ENSMUST00000034874.7|Cyp11a1|ENSMUSG00000032323.7|cytochrome P450, family 11, subfamily a, polypeptide 1
mm10_v2_chr7_+_105375053_105375098	0.509412	Sox2	ENSMUST00000106805.2|Gm5901|ENSMUSG00000078611.2|predicted gene 5901
mm10_v2_chr2_+_24949747_24949801	0.506594	Sox2	ENSMUST00000028350.3|Zmynd19|ENSMUSG00000026974.6|zinc finger, MYND domain containing 19
mm10_v2_chr2_+_181767040_181767073	0.506269	Sox2	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr9_-_110624361_110624439	0.505184	Sox2	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr13_-_54749627_54749697	0.505007	Sox2	ENSMUST00000099506.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr2_-_131160006_131160081	0.503447	Sox2	ENSMUST00000103188.3|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene 	ENSMUST00000133602.1|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene 	ENSMUST00000028800.5|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene
mm10_v2_chr15_-_58214882_58214926	0.502324	Sox2	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr11_-_3863895_3863910	0.501789	Sox2	ENSMUST00000070552.7|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr6_+_34598500_34598529	0.500786	Sox2	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr2_+_25180737_25180764	0.498855	Sox2	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr17_+_80944611_80944644	0.497917	Sox2	ENSMUST00000025092.4|Tmem178|ENSMUSG00000024245.4|transmembrane protein 178
mm10_v2_chr14_+_101840501_101840554	0.493936	Sox2	ENSMUST00000159026.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chrX_+_93654863_93654981	0.491148	Sox2	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr7_-_43489967_43490075	0.490953	Sox2	ENSMUST00000107974.1|Iglon5|ENSMUSG00000013367.4|IgLON family member 5
mm10_v2_chr12_+_84996309_84996419	0.489694	Sox2	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr3_+_7366598_7366641	0.489298	Sox2	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr2_+_156065738_156065760	0.486849	Sox2	ENSMUST00000137966.1|Spag4|ENSMUSG00000038180.5|sperm associated antigen 4
mm10_v2_chr14_+_73142490_73142564	0.486678	Sox2	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr9_+_108826320_108826320	0.486666	Sox2	ENSMUST00000024238.5|Celsr3|ENSMUSG00000023473.6|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
mm10_v2_chr12_+_24708984_24709029	0.48404	Sox2	ENSMUST00000154588.1|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr5_+_108065696_108065738	0.483927	Sox2	ENSMUST00000172045.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr4_-_116405986_116406120	0.483419	Sox2	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr2_+_181187247_181187347	0.482924	Sox2	ENSMUST00000016488.6|Ppdpf|ENSMUSG00000016344.8|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene 	ENSMUST00000108841.1|Ppdpf|ENSMUSG00000016344.8|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene
mm10_v2_chr2_+_181767283_181767322	0.481726	Sox2	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr5_-_136198908_136198970	0.478016	Sox2	ENSMUST00000149151.1|Prkrip1|ENSMUSG00000039737.5|Prkr interacting protein 1 (IL11 inducible) 	ENSMUST00000151786.1|Prkrip1|ENSMUSG00000039737.5|Prkr interacting protein 1 (IL11 inducible)
mm10_v2_chr8_+_75109528_75109601	0.474566	Sox2	ENSMUST00000164309.1|Mcm5|ENSMUSG00000005410.5|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)
mm10_v2_chr7_+_102702331_102702331	0.468563	Sox2	ENSMUST00000094124.3|Olfr558|ENSMUSG00000070423.3|olfactory receptor 558
mm10_v2_chr3_+_89215170_89215181	0.468293	Sox2	ENSMUST00000029682.4|Thbs3|ENSMUSG00000028047.5|thrombospondin 3
mm10_v2_chr9_+_35669624_35669678	0.467997	Sox2	ENSMUST00000118254.1|Pate2|ENSMUSG00000074452.6|prostate and testis expressed 2
mm10_v2_chr12_+_108605757_108605814	0.467186	Sox2	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr18_+_23954668_23954704	0.465749	Sox2	ENSMUST00000060762.4|Zfp397|ENSMUSG00000024276.6|zinc finger protein 397
mm10_v2_chr9_+_69397933_69397972	0.465443	Sox2	ENSMUST00000117610.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000145538.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000117246.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr19_+_44493472_44493472	0.46412	Sox2	ENSMUST00000041163.4|Wnt8b|ENSMUSG00000036961.4|wingless related MMTV integration site 8b
mm10_v2_chr7_-_78577771_78577975	0.46355	Sox2	ENSMUST00000039438.7|Ntrk3|ENSMUSG00000059146.6|neurotrophic tyrosine kinase, receptor, type 3
mm10_v2_chr6_+_34598530_34598587	0.463151	Sox2	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr4_+_43406435_43406615	0.459559	Sox2	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr7_-_25005895_25005937	0.4594	Sox2	ENSMUST00000102858.3|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide 	ENSMUST00000080882.6|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm10_v2_chr1_+_39900883_39900963	0.458892	Sox2	ENSMUST00000163854.2|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4 	ENSMUST00000168431.1|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4
mm10_v2_chr9_+_110132015_110132102	0.456876	Sox2	ENSMUST00000088716.5|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111969.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000035057.7|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111966.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111968.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm10_v2_chr2_-_126675461_126675509	0.4564	Sox2	ENSMUST00000103226.3|Gabpb1|ENSMUSG00000027361.9|GA repeat binding protein, beta 1 	ENSMUST00000110424.2|Gabpb1|ENSMUSG00000027361.9|GA repeat binding protein, beta 1
mm10_v2_chr6_-_99028874_99028942	0.455622	Sox2	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr1_-_173367638_173367695	0.455235	Sox2	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr14_+_61138445_61138495	0.45367	Sox2	ENSMUST00000089394.3|Sacs|ENSMUSG00000048279.11|sacsin 	ENSMUST00000119509.1|Sacs|ENSMUSG00000048279.11|sacsin
mm10_v2_chr10_-_22731336_22731447	0.453567	Sox2	ENSMUST00000127698.1|Tbpl1|ENSMUSG00000071359.7|TATA box binding protein-like 1
mm10_v2_chr7_+_16310412_16310455	0.453466	Sox2	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr17_+_67697253_67697276	0.452523	Sox2	ENSMUST00000035471.7|Lama1|ENSMUSG00000032796.7|laminin, alpha 1
mm10_v2_chr7_-_98361275_98361295	0.452132	Sox2	ENSMUST00000094161.4|Tsku|ENSMUSG00000049580.6|tsukushi 	ENSMUST00000164726.1|Tsku|ENSMUSG00000049580.6|tsukushi 	ENSMUST00000167405.1|Tsku|ENSMUSG00000049580.6|tsukushi
mm10_v2_chr14_-_62456286_62456289	0.451726	Sox2	ENSMUST00000165651.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2 	ENSMUST00000022501.3|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr11_+_87582201_87582215	0.449163	Sox2	ENSMUST00000133202.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr19_-_24961545_24961630	0.447004	Sox2	ENSMUST00000025815.8|Cbwd1|ENSMUSG00000024878.8|COBW domain containing 1
mm10_v2_chr12_+_24708241_24708292	0.445039	Sox2	ENSMUST00000020980.5|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr10_+_80330127_80330211	0.444493	Sox2	ENSMUST00000040081.6|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6
mm10_v2_chr4_-_91376490_91376502	0.444369	Sox2	ENSMUST00000107124.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr6_-_128437653_128437730	0.44373	Sox2	ENSMUST00000151796.1|Fkbp4|ENSMUSG00000030357.4|FK506 binding protein 4
mm10_v2_chr4_+_148130883_148130915	0.442882	Sox2	ENSMUST00000084129.2|Mad2l2|ENSMUSG00000029003.5|MAD2 mitotic arrest deficient-like 2
mm10_v2_chr1_+_161142706_161142767	0.442552	Sox2	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr15_+_88751649_88751661	0.441865	Sox2	ENSMUST00000041297.8|Zbed4|ENSMUSG00000034333.9|zinc finger, BED domain containing 4
mm10_v2_chr9_-_107872403_107872422	0.440414	Sox2	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr2_-_152951688_152951700	0.439555	Sox2	ENSMUST00000109811.3|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr11_+_76217608_76217636	0.438042	Sox2	ENSMUST00000040806.4|Dbil5|ENSMUSG00000038057.4|diazepam binding inhibitor-like 5
mm10_v2_chr14_-_5389049_5389049	0.43615	Sox2	ENSMUST00000177986.1|Gm3500|ENSMUSG00000096003.1|predicted gene 3500
mm10_v2_chr4_+_155839724_155839762	0.435902	Sox2	ENSMUST00000030947.3|Mxra8|ENSMUSG00000029070.3|matrix-remodelling associated 8
mm10_v2_chr12_-_72236692_72236724	0.435487	Sox2	ENSMUST00000021497.9|Rtn1|ENSMUSG00000021087.11|reticulon 1 	ENSMUST00000137990.1|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr7_+_82175156_82175199	0.433045	Sox2	ENSMUST00000180243.1|Sh3gl3|ENSMUSG00000030638.7|SH3-domain GRB2-like 3
mm10_v2_chr4_-_99120856_99120894	0.430687	Sox2	ENSMUST00000030286.7|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr17_+_35001282_35001347	0.430359	Sox2	ENSMUST00000174260.1|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase
mm10_v2_chr4_+_154869585_154869636	0.430154	Sox2	ENSMUST00000079269.7|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000163732.1|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000080559.6|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1
mm10_v2_chr8_-_69184177_69184240	0.428876	Sox2	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chr9_-_65021645_65021717	0.428595	Sox2	ENSMUST00000036615.5|Ptplad1|ENSMUSG00000033629.5|protein tyrosine phosphatase-like A domain containing 1
mm10_v2_chr17_-_56476462_56476483	0.42857	Sox2	ENSMUST00000067538.5|Ptprs|ENSMUSG00000013236.10|protein tyrosine phosphatase, receptor type, S
mm10_v2_chr16_-_38522662_38522683	0.428195	Sox2	ENSMUST00000002925.5|Timmdc1|ENSMUSG00000002846.9|translocase of inner mitochondrial membrane domain containing 1
mm10_v2_chr6_-_50261743_50261788	0.425445	Sox2	ENSMUST00000101405.3|Dfna5|ENSMUSG00000029821.9|deafness, autosomal dominant 5 (human) 	ENSMUST00000165099.1|Dfna5|ENSMUSG00000029821.9|deafness, autosomal dominant 5 (human) 	ENSMUST00000170142.1|Dfna5|ENSMUSG00000029821.9|deafness, autosomal dominant 5 (human)
mm10_v2_chr11_+_46055973_46056068	0.423843	Sox2	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr17_-_56935388_56935504	0.42367	Sox2	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr2_+_124610573_124610613	0.421982	Sox2	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr3_-_108210438_108210502	0.419507	Sox2	ENSMUST00000117784.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000119650.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000117409.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2
mm10_v2_chr9_-_72111755_72111821	0.419507	Sox2	ENSMUST00000183492.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184523.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000034755.6|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_-_160367057_160367073	0.418803	Sox2	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr17_-_57087729_57087782	0.418698	Sox2	ENSMUST00000071135.5|Tubb4a|ENSMUSG00000062591.5|tubulin, beta 4A class IVA
mm10_v2_chr5_-_52190484_52190524	0.417642	Sox2	ENSMUST00000031061.7|Dhx15|ENSMUSG00000029169.7|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm10_v2_chr7_-_105787544_105787555	0.416651	Sox2	ENSMUST00000078482.5|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila) 	ENSMUST00000154659.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr6_-_52165413_52165413	0.41645	Sox2	ENSMUST00000014848.8|Hoxa2|ENSMUSG00000014704.8|homeobox A2
mm10_v2_chr19_-_10240689_10240751	0.416097	Sox2	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chr11_+_94044331_94044365	0.415879	Sox2	ENSMUST00000024979.8|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr4_+_99656299_99656340	0.415011	Sox2	ENSMUST00000087285.3|Foxd3|ENSMUSG00000067261.3|forkhead box D3
mm10_v2_chr2_+_4882204_4882252	0.414672	Sox2	ENSMUST00000115019.1|Sephs1|ENSMUSG00000026662.7|selenophosphate synthetase 1
mm10_v2_chr9_-_110645328_110645368	0.413916	Sox2	ENSMUST00000149089.1|Nbeal2|ENSMUSG00000056724.8|neurobeachin-like 2
mm10_v2_chr18_-_43687695_43687773	0.412603	Sox2	ENSMUST00000082254.6|Jakmip2|ENSMUSG00000024502.9|janus kinase and microtubule interacting protein 2
mm10_v2_chr4_+_136284658_136284686	0.410419	Sox2	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr1_-_189343704_189343832	0.407575	Sox2	ENSMUST00000180044.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2 	ENSMUST00000110920.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2
mm10_v2_chr6_+_134035691_134035717	0.406157	Sox2	ENSMUST00000081028.6|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene) 	ENSMUST00000111963.1|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene)
mm10_v2_chr10_+_69706326_69706382	0.40593	Sox2	ENSMUST00000182992.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr16_-_76373014_76373103	0.405682	Sox2	ENSMUST00000054178.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr11_+_101316917_101316977	0.405324	Sox2	ENSMUST00000151385.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr10_+_80329953_80329987	0.404215	Sox2	ENSMUST00000105358.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6 	ENSMUST00000105357.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6 	ENSMUST00000105354.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6 	ENSMUST00000105355.1|Reep6|ENSMUSG00000035504.10|receptor accessory protein 6
mm10_v2_chr5_+_33983437_33983529	0.404215	Sox2	ENSMUST00000114384.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000094869.5|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000114383.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr11_+_94044194_94044238	0.403909	Sox2	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr15_-_81729864_81729919	0.403404	Sox2	ENSMUST00000171115.1|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1 	ENSMUST00000170134.1|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1 	ENSMUST00000052374.5|Rangap1|ENSMUSG00000022391.9|RAN GTPase activating protein 1
mm10_v2_chr1_+_74588347_74588383	0.403138	Sox2	ENSMUST00000113732.1|Bcs1l|ENSMUSG00000026172.6|BCS1-like (yeast)
mm10_v2_chr2_-_119787504_119787537	0.402893	Sox2	ENSMUST00000110793.1|Rpap1|ENSMUSG00000034032.9|RNA polymerase II associated protein 1 	ENSMUST00000099529.2|Rpap1|ENSMUSG00000034032.9|RNA polymerase II associated protein 1 	ENSMUST00000048493.5|Rpap1|ENSMUSG00000034032.9|RNA polymerase II associated protein 1
mm10_v2_chr11_+_94044241_94044273	0.402577	Sox2	ENSMUST00000103168.3|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr10_+_31313375_31313420	0.401839	Sox2	ENSMUST00000000304.6|Hddc2|ENSMUSG00000000295.6|HD domain containing 2
mm10_v2_chr15_-_103215285_103215366	0.401831	Sox2	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr2_+_3114220_3114225	0.401334	Sox2	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr2_+_28513105_28513126	0.400104	Sox2	ENSMUST00000135803.1|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chrX_-_72656135_72656199	0.396351	Sox2	ENSMUST00000055966.6|Gabra3|ENSMUSG00000031343.7|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm10_v2_chr2_-_151009364_151009398	0.395396	Sox2	ENSMUST00000109896.1|Ninl|ENSMUSG00000068115.7|ninein-like
mm10_v2_chr3_+_65528457_65528471	0.39518	Sox2	ENSMUST00000130705.1|Tiparp|ENSMUSG00000034640.3|TCDD-inducible poly(ADP-ribose) polymerase
mm10_v2_chr2_-_146511899_146511979	0.39501	Sox2	ENSMUST00000131824.1|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr8_+_71464910_71465000	0.394832	Sox2	ENSMUST00000048914.6|Mrpl34|ENSMUSG00000034880.6|mitochondrial ribosomal protein L34
mm10_v2_chr1_-_65103363_65103378	0.394493	Sox2	ENSMUST00000061497.8|Cryga|ENSMUSG00000044429.8|crystallin, gamma A
mm10_v2_chr13_-_54687644_54687688	0.393559	Sox2	ENSMUST00000129881.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr8_-_4217459_4217503	0.393319	Sox2	ENSMUST00000176227.1|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr5_-_137858034_137858054	0.391904	Sox2	ENSMUST00000110978.2|Pilrb1|ENSMUSG00000066684.6|paired immunoglobin-like type 2 receptor beta 1
mm10_v2_chr17_+_12916329_12916447	0.391384	Sox2	ENSMUST00000089024.6|Tcp1|ENSMUSG00000068039.6|t-complex protein 1 	ENSMUST00000151287.1|Tcp1|ENSMUSG00000068039.6|t-complex protein 1 	ENSMUST00000143961.1|Tcp1|ENSMUSG00000068039.6|t-complex protein 1
mm10_v2_chr5_+_107331157_107331197	0.391375	Sox2	ENSMUST00000031215.8|Brdt|ENSMUSG00000029279.9|bromodomain, testis-specific 	ENSMUST00000112677.3|Brdt|ENSMUSG00000029279.9|bromodomain, testis-specific
mm10_v2_chr8_-_4216912_4217003	0.390908	Sox2	ENSMUST00000177491.1|BC068157|ENSMUSG00000064125.8|cDNA sequence BC068157
mm10_v2_chr7_-_98361310_98361328	0.389009	Sox2	ENSMUST00000165257.1|Tsku|ENSMUSG00000049580.6|tsukushi
mm10_v2_chr13_-_47043116_47043343	0.388571	Sox2	ENSMUST00000110118.1|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase 	ENSMUST00000124948.1|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase 	ENSMUST00000021806.3|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase 	ENSMUST00000136864.1|Tpmt|ENSMUSG00000021376.4|thiopurine methyltransferase
mm10_v2_chr11_-_75438900_75438946	0.38619	Sox2	ENSMUST00000108437.1|Serpinf2|ENSMUSG00000038224.6|serine (or cysteine) peptidase inhibitor, clade F, member 2
mm10_v2_chr1_-_97761538_97761609	0.385771	Sox2	ENSMUST00000171129.1|Ppip5k2|ENSMUSG00000040648.8|diphosphoinositol pentakisphosphate kinase 2
mm10_v2_chr14_+_50924968_50925004	0.384433	Sox2	ENSMUST00000049411.5|Apex1|ENSMUSG00000035960.7|apurinic/apyrimidinic endonuclease 1 	ENSMUST00000136753.1|Apex1|ENSMUSG00000035960.7|apurinic/apyrimidinic endonuclease 1 	ENSMUST00000154288.1|Apex1|ENSMUSG00000035960.7|apurinic/apyrimidinic endonuclease 1
mm10_v2_chr7_-_49636847_49636851	0.384423	Sox2	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr4_+_136284708_136284775	0.384226	Sox2	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr10_+_42860543_42860627	0.383471	Sox2	ENSMUST00000157071.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr1_+_87213924_87213990	0.383405	Sox2	ENSMUST00000113230.1|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2 	ENSMUST00000123735.1|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2
mm10_v2_chr17_+_26252903_26252914	0.381838	Sox2	ENSMUST00000025023.7|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like
mm10_v2_chr8_+_70863127_70863127	0.381148	Sox2	ENSMUST00000050921.2|A230052G05Rik|ENSMUSG00000020887.3|RIKEN cDNA A230052G05 gene
mm10_v2_chr11_-_120598346_120598405	0.380885	Sox2	ENSMUST00000026125.2|Alyref|ENSMUSG00000025134.2|Aly/REF export factor
mm10_v2_chr10_-_37138863_37138937	0.380626	Sox2	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr5_+_34949435_34949504	0.379598	Sox2	ENSMUST00000030984.7|Rgs12|ENSMUSG00000029101.8|regulator of G-protein signaling 12
mm10_v2_chr6_+_119848193_119848193	0.378805	Sox2	ENSMUST00000062454.1|3110021A11Rik|ENSMUSG00000050604.1|RIKEN cDNA 3110021A11 gene
mm10_v2_chr4_-_41723129_41723179	0.377454	Sox2	ENSMUST00000171641.1|Dctn3|ENSMUSG00000028447.5|dynactin 3 	ENSMUST00000030158.4|Dctn3|ENSMUSG00000028447.5|dynactin 3
mm10_v2_chr5_+_138085083_138085147	0.376715	Sox2	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr8_+_22411340_22411460	0.374969	Sox2	ENSMUST00000033934.3|Mrps31|ENSMUSG00000031533.3|mitochondrial ribosomal protein S31
mm10_v2_chr13_+_51100810_51100933	0.374827	Sox2	ENSMUST00000095797.5|Spin1|ENSMUSG00000021395.10|spindlin 1
mm10_v2_chr3_+_9403049_9403092	0.374441	Sox2	ENSMUST00000180874.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene 	ENSMUST00000181331.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene 	ENSMUST00000181930.1|C030034L19Rik|ENSMUSG00000097365.1|RIKEN cDNA C030034L19 gene
mm10_v2_chr11_+_94044111_94044121	0.374381	Sox2	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr1_+_135232045_135232110	0.373525	Sox2	ENSMUST00000110798.3|Gm4204|ENSMUSG00000079139.3|predicted gene 4204
mm10_v2_chr7_+_87246649_87246661	0.37352	Sox2	ENSMUST00000068829.5|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4 	ENSMUST00000032781.7|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4
mm10_v2_chr5_+_147430153_147430217	0.371768	Sox2	ENSMUST00000031651.8|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr6_+_51432663_51432674	0.36964	Sox2	ENSMUST00000005103.5|Nfe2l3|ENSMUSG00000029832.10|nuclear factor, erythroid derived 2, like 3
mm10_v2_chr11_+_46404720_46404730	0.368801	Sox2	ENSMUST00000063166.5|Fam71b|ENSMUSG00000020401.6|family with sequence similarity 71, member B
mm10_v2_chr4_+_123016590_123016613	0.368252	Sox2	ENSMUST00000102649.3|Trit1|ENSMUSG00000028653.10|tRNA isopentenyltransferase 1
mm10_v2_chr6_+_54039558_54039575	0.367891	Sox2	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr19_-_5729618_5729700	0.36763	Sox2	ENSMUST00000116558.2|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000099955.3|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000161368.1|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B
mm10_v2_chr10_-_61452658_61452813	0.367393	Sox2	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr11_-_3774706_3774738	0.366698	Sox2	ENSMUST00000155197.1|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr17_+_47505073_47505084	0.365364	Sox2	ENSMUST00000183210.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr14_-_48662740_48662872	0.364419	Sox2	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr10_+_80148263_80148279	0.363795	Sox2	ENSMUST00000099492.3|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000042057.5|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chrX_+_166238901_166238914	0.363495	Sox2	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr10_+_80755196_80755239	0.363462	Sox2	ENSMUST00000105336.2|Dot1l|ENSMUSG00000061589.8|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm10_v2_chr16_+_20097554_20097596	0.362872	Sox2	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr10_-_79874233_79874439	0.362595	Sox2	ENSMUST00000166023.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000167707.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000165601.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr7_+_127233227_127233317	0.360768	Sox2	ENSMUST00000056232.6|Zfp553|ENSMUSG00000045598.9|zinc finger protein 553
mm10_v2_chr4_+_141010644_141010696	0.359654	Sox2	ENSMUST00000071977.8|Mfap2|ENSMUSG00000060572.11|microfibrillar-associated protein 2
mm10_v2_chr2_-_129048172_129048172	0.358082	Sox2	ENSMUST00000145798.2|Gm14025|ENSMUSG00000079051.4|predicted gene 14025
mm10_v2_chr11_+_109485606_109485713	0.356363	Sox2	ENSMUST00000106697.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr17_-_50094277_50094332	0.355599	Sox2	ENSMUST00000113195.1|Rftn1|ENSMUSG00000039316.8|raftlin lipid raft linker 1
mm10_v2_chr6_+_86371489_86371583	0.355426	Sox2	ENSMUST00000089558.5|Snrpg|ENSMUSG00000057278.6|small nuclear ribonucleoprotein polypeptide G
mm10_v2_chr17_-_12769605_12769700	0.354763	Sox2	ENSMUST00000024599.7|Igf2r|ENSMUSG00000023830.7|insulin-like growth factor 2 receptor
mm10_v2_chr7_+_28180226_28180266	0.354735	Sox2	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr1_-_33814516_33814576	0.354344	Sox2	ENSMUST00000044455.5|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451 	ENSMUST00000115167.1|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451
mm10_v2_chr12_+_38781093_38781129	0.353954	Sox2	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr14_+_101840602_101840677	0.353691	Sox2	ENSMUST00000159314.1|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr3_+_65528404_65528431	0.352014	Sox2	ENSMUST00000047906.3|Tiparp|ENSMUSG00000034640.3|TCDD-inducible poly(ADP-ribose) polymerase
mm10_v2_chr16_-_89818338_89818356	0.351949	Sox2	ENSMUST00000164263.2|Tiam1|ENSMUSG00000002489.9|T cell lymphoma invasion and metastasis 1
mm10_v2_chr5_+_3928033_3928178	0.350436	Sox2	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr9_+_59291565_59291577	0.350357	Sox2	ENSMUST00000026266.7|Adpgk|ENSMUSG00000025236.10|ADP-dependent glucokinase
mm10_v2_chr14_-_8309770_8309795	0.349151	Sox2	ENSMUST00000121887.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000036070.8|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000137133.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr12_+_3891728_3891801	0.348761	Sox2	ENSMUST00000172689.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000111186.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr18_-_23981555_23981555	0.348641	Sox2	ENSMUST00000115829.1|Zscan30|ENSMUSG00000024274.8|zinc finger and SCAN domain containing 30
mm10_v2_chr7_+_45216671_45216695	0.347859	Sox2	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr4_+_59626189_59626253	0.34776	Sox2	ENSMUST00000070150.4|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene 	ENSMUST00000052420.6|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene
mm10_v2_chr3_+_145987835_145987901	0.346414	Sox2	ENSMUST00000039517.6|Syde2|ENSMUSG00000036863.7|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm10_v2_chr2_+_68861564_68861586	0.344472	Sox2	ENSMUST00000176018.1|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr4_-_130175113_130175138	0.344398	Sox2	ENSMUST00000105998.1|Tinagl1|ENSMUSG00000028776.8|tubulointerstitial nephritis antigen-like 1
mm10_v2_chr7_+_28179469_28179535	0.343647	Sox2	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr3_+_88553716_88553806	0.343577	Sox2	ENSMUST00000008748.6|Ubqln4|ENSMUSG00000008604.6|ubiquilin 4
mm10_v2_chr12_+_38780817_38780854	0.341514	Sox2	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr7_+_28180272_28180316	0.341114	Sox2	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr10_+_70440844_70440937	0.3411	Sox2	ENSMUST00000173042.1|Fam13c|ENSMUSG00000043259.8|family with sequence similarity 13, member C 	ENSMUST00000062883.6|Fam13c|ENSMUSG00000043259.8|family with sequence similarity 13, member C
mm10_v2_chr1_+_91801453_91801487	0.340448	Sox2	ENSMUST00000007949.3|Twist2|ENSMUSG00000007805.3|twist basic helix-loop-helix transcription factor 2
mm10_v2_chr18_+_56707725_56707940	0.340173	Sox2	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr10_+_67096456_67096534	0.339981	Sox2	ENSMUST00000174317.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr13_+_93304066_93304138	0.339653	Sox2	ENSMUST00000109493.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr15_-_98953541_98953560	0.337921	Sox2	ENSMUST00000097014.5|Tuba1a|ENSMUSG00000072235.5|tubulin, alpha 1A
mm10_v2_chr10_-_82623190_82623248	0.336644	Sox2	ENSMUST00000183363.1|1190007I07Rik|ENSMUSG00000063320.5|RIKEN cDNA 1190007I07 gene 	ENSMUST00000079648.5|1190007I07Rik|ENSMUSG00000063320.5|RIKEN cDNA 1190007I07 gene 	ENSMUST00000185168.1|1190007I07Rik|ENSMUSG00000063320.5|RIKEN cDNA 1190007I07 gene
mm10_v2_chr9_+_69397897_69397928	0.335994	Sox2	ENSMUST00000034761.8|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000125938.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr1_+_130865669_130865768	0.335566	Sox2	ENSMUST00000038829.5|Faim3|ENSMUSG00000042474.5|Fas apoptotic inhibitory molecule 3
mm10_v2_chr18_+_42511496_42511521	0.33452	Sox2	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr6_+_65042575_65042667	0.333257	Sox2	ENSMUST00000031984.6|Smarcad1|ENSMUSG00000029920.7|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm10_v2_chr17_-_34615965_34615978	0.332081	Sox2	ENSMUST00000097345.3|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8 	ENSMUST00000015611.7|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chr1_+_6487231_6487338	0.331766	Sox2	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr15_-_88954400_88954446	0.331048	Sox2	ENSMUST00000109371.1|Ttll8|ENSMUSG00000022388.8|tubulin tyrosine ligase-like family, member 8
mm10_v2_chr3_-_92083132_92083147	0.330916	Sox2	ENSMUST00000058150.6|Lor|ENSMUSG00000043165.6|loricrin
mm10_v2_chr9_+_58554799_58554799	0.330854	Sox2	ENSMUST00000098676.2|Gm10657|ENSMUSG00000074273.2|predicted gene 10657
mm10_v2_chr1_-_33814591_33814600	0.329514	Sox2	ENSMUST00000019861.6|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451
mm10_v2_chr7_+_100494044_100494088	0.32932	Sox2	ENSMUST00000153287.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr5_+_105876532_105876585	0.32836	Sox2	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr4_+_6191093_6191122	0.328139	Sox2	ENSMUST00000029907.5|Ubxn2b|ENSMUSG00000028243.5|UBX domain protein 2B
mm10_v2_chr5_+_65131184_65131231	0.327209	Sox2	ENSMUST00000031089.5|Klhl5|ENSMUSG00000054920.6|kelch-like 5 	ENSMUST00000101191.3|Klhl5|ENSMUSG00000054920.6|kelch-like 5
mm10_v2_chr17_-_35000746_35000801	0.325514	Sox2	ENSMUST00000163360.1|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr11_-_69900886_69900929	0.325345	Sox2	ENSMUST00000108621.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000100969.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr2_+_163438455_163438536	0.324368	Sox2	ENSMUST00000109420.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000109421.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000018087.6|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000137070.1|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1
mm10_v2_chr5_+_148265265_148265305	0.324052	Sox2	ENSMUST00000071878.5|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr2_+_15055274_15055379	0.323589	Sox2	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chrX_-_140543177_140543195	0.323572	Sox2	ENSMUST00000055738.5|Tsc22d3|ENSMUSG00000031431.7|TSC22 domain family, member 3
mm10_v2_chr12_+_84996487_84996496	0.323568	Sox2	ENSMUST00000101202.3|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr13_-_104109576_104109619	0.322551	Sox2	ENSMUST00000109315.3|Nln|ENSMUSG00000021710.10|neurolysin (metallopeptidase M3 family)
mm10_v2_chr3_-_95315086_95315117	0.322452	Sox2	ENSMUST00000098867.3|Gm10691|ENSMUSG00000074414.3|predicted gene 10691
mm10_v2_chr9_-_79718518_79718592	0.322427	Sox2	ENSMUST00000071750.6|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr7_+_126272589_126272619	0.322252	Sox2	ENSMUST00000056028.9|Sbk1|ENSMUSG00000042978.9|SH3-binding kinase 1
mm10_v2_chr7_+_73375494_73375549	0.321919	Sox2	ENSMUST00000094312.5|Rgma|ENSMUSG00000070509.9|RGM domain family, member A 	ENSMUST00000119206.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr11_+_69846374_69846387	0.320041	Sox2	ENSMUST00000108632.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chrX_-_105929397_105929408	0.319807	Sox2	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chrX_+_157702574_157702598	0.319479	Sox2	ENSMUST00000112520.1|Smpx|ENSMUSG00000041476.6|small muscle protein, X-linked
mm10_v2_chr6_+_83137089_83137121	0.318706	Sox2	ENSMUST00000121093.1|Rtkn|ENSMUSG00000034930.9|rhotekin 	ENSMUST00000087938.4|Rtkn|ENSMUSG00000034930.9|rhotekin
mm10_v2_chr9_+_123767211_123767241	0.318414	Sox2	ENSMUST00000166236.1|Ccr9|ENSMUSG00000029530.9|chemokine (C-C motif) receptor 9 	ENSMUST00000111454.2|Ccr9|ENSMUSG00000029530.9|chemokine (C-C motif) receptor 9 	ENSMUST00000168910.1|Ccr9|ENSMUSG00000029530.9|chemokine (C-C motif) receptor 9
mm10_v2_chr3_+_102010138_102010171	0.317081	Sox2	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr5_+_66676098_66676257	0.317077	Sox2	ENSMUST00000031131.9|Uchl1|ENSMUSG00000029223.9|ubiquitin carboxy-terminal hydrolase L1
mm10_v2_chr11_+_93886157_93886219	0.316933	Sox2	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr17_-_46890405_46890405	0.315794	Sox2	ENSMUST00000086675.3|A330017A19Rik|ENSMUSG00000073388.2|RIKEN cDNA A330017A19 gene
mm10_v2_chr9_-_72111827_72111895	0.315046	Sox2	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr17_-_23586214_23586269	0.313612	Sox2	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr1_+_62703667_62703702	0.313339	Sox2	ENSMUST00000114155.1|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000027112.6|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000063594.6|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000114157.2|Nrp2|ENSMUSG00000025969.9|neuropilin 2
mm10_v2_chr9_+_78615501_78615546	0.313052	Sox2	ENSMUST00000093812.4|Cd109|ENSMUSG00000046186.8|CD109 antigen
mm10_v2_chr4_+_43957678_43957735	0.312192	Sox2	ENSMUST00000107855.1|Glipr2|ENSMUSG00000028480.8|GLI pathogenesis-related 2
mm10_v2_chr9_-_88522876_88522929	0.311312	Sox2	ENSMUST00000180563.2|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000183030.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000182232.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5
mm10_v2_chr19_-_4334001_4334031	0.311177	Sox2	ENSMUST00000176653.1|Kdm2a|ENSMUSG00000054611.10|lysine (K)-specific demethylase 2A
mm10_v2_chr4_+_11579647_11579674	0.311019	Sox2	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr1_+_165788746_165788769	0.310826	Sox2	ENSMUST00000161559.2|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr3_+_61364507_61364633	0.310778	Sox2	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr5_+_88583527_88583590	0.309842	Sox2	ENSMUST00000031229.6|Rufy3|ENSMUSG00000029291.7|RUN and FYVE domain containing 3
mm10_v2_chr6_+_40964760_40964781	0.308789	Sox2	ENSMUST00000076638.5|1810009J06Rik|ENSMUSG00000094808.1|RIKEN cDNA 1810009J06 gene
mm10_v2_chr16_+_27388869_27388980	0.308639	Sox2	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr6_+_51470633_51470746	0.308479	Sox2	ENSMUST00000114445.1|Cbx3|ENSMUSG00000029836.9|chromobox 3 	ENSMUST00000114446.1|Cbx3|ENSMUSG00000029836.9|chromobox 3 	ENSMUST00000141711.1|Cbx3|ENSMUSG00000029836.9|chromobox 3
mm10_v2_chr8_-_77724426_77724483	0.308463	Sox2	ENSMUST00000034029.7|Ednra|ENSMUSG00000031616.7|endothelin receptor type A
mm10_v2_chr17_+_35000987_35001097	0.307473	Sox2	ENSMUST00000087315.7|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase 	ENSMUST00000173584.1|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase
mm10_v2_chr16_-_5132458_5132483	0.306951	Sox2	ENSMUST00000035672.3|Ppl|ENSMUSG00000039457.3|periplakin
mm10_v2_chr12_+_29528382_29528468	0.305227	Sox2	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr3_+_53463666_53463681	0.304649	Sox2	ENSMUST00000058577.4|Proser1|ENSMUSG00000049504.11|proline and serine rich 1
mm10_v2_chr13_+_83504032_83504050	0.304401	Sox2	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr14_+_73142591_73142723	0.304023	Sox2	ENSMUST00000170368.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chrX_-_12128386_12128412	0.302961	Sox2	ENSMUST00000145872.1|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor
mm10_v2_chr1_+_37997975_37998010	0.302579	Sox2	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr17_+_34325658_34325679	0.301094	Sox2	ENSMUST00000050325.8|H2-Eb2|ENSMUSG00000067341.5|histocompatibility 2, class II antigen E beta2
mm10_v2_chr13_-_75943812_75943950	0.300796	Sox2	ENSMUST00000022078.5|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3 	ENSMUST00000109606.1|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3
mm10_v2_chr4_+_128727585_128727710	0.300496	Sox2	ENSMUST00000106079.3|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila) 	ENSMUST00000133439.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr7_+_5056856_5056916	0.29978	Sox2	ENSMUST00000131368.1|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106 	ENSMUST00000123956.1|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr2_-_173276144_173276189	0.299206	Sox2	ENSMUST00000139306.1|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr1_+_59482133_59482179	0.299171	Sox2	ENSMUST00000114246.2|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila) 	ENSMUST00000037105.6|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila)
mm10_v2_chr5_-_138155694_138155744	0.299118	Sox2	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr4_+_107802277_107802413	0.299001	Sox2	ENSMUST00000106733.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENSMUST00000030356.3|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENSMUST00000106732.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 	ENSMUST00000126573.1|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr2_-_20968526_20968625	0.298963	Sox2	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr17_+_55445550_55445701	0.298311	Sox2	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr11_-_5950018_5950081	0.297734	Sox2	ENSMUST00000102920.3|Gck|ENSMUSG00000041798.9|glucokinase
mm10_v2_chr7_+_45785331_45785390	0.297671	Sox2	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr9_-_79718631_79718678	0.297029	Sox2	ENSMUST00000180083.1|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr2_+_180581220_180581304	0.296708	Sox2	ENSMUST00000169630.1|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chr9_+_66946057_66946143	0.29632	Sox2	ENSMUST00000040917.7|Rps27l|ENSMUSG00000036781.7|ribosomal protein S27-like 	ENSMUST00000127896.1|Rps27l|ENSMUSG00000036781.7|ribosomal protein S27-like
mm10_v2_chr18_+_60212080_60212122	0.294947	Sox2	ENSMUST00000031549.5|Gm4951|ENSMUSG00000073555.1|predicted gene 4951
mm10_v2_chr14_-_54577578_54577661	0.294516	Sox2	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr6_-_113600645_113600715	0.293746	Sox2	ENSMUST00000035870.4|Fancd2os|ENSMUSG00000033963.10|Fancd2 opposite strand
mm10_v2_chr11_+_4883186_4883222	0.293021	Sox2	ENSMUST00000139737.1|Nipsnap1|ENSMUSG00000034285.9|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm10_v2_chr11_+_20647149_20647156	0.292488	Sox2	ENSMUST00000109585.1|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr5_+_21646033_21646057	0.292299	Sox2	ENSMUST00000095495.2|Armc10|ENSMUSG00000038525.10|armadillo repeat containing 10
mm10_v2_chr1_+_87213909_87213918	0.291539	Sox2	ENSMUST00000113232.1|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2 	ENSMUST00000113233.1|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2 	ENSMUST00000050876.7|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2 	ENSMUST00000076362.5|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2 	ENSMUST00000113235.1|Eif4e2|ENSMUSG00000026254.11|eukaryotic translation initiation factor 4E member 2
mm10_v2_chr9_+_96259246_96259261	0.290743	Sox2	ENSMUST00000179065.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000165768.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr8_+_122376609_122376652	0.290682	Sox2	ENSMUST00000017622.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000093073.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000176699.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr2_+_92185438_92185463	0.289812	Sox2	ENSMUST00000128781.2|Phf21a|ENSMUSG00000058318.9|PHD finger protein 21A
mm10_v2_chr2_-_156111954_156111978	0.289703	Sox2	ENSMUST00000059647.5|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000109604.2|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000142960.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000138068.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000136296.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000128499.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12
mm10_v2_chr7_-_89517576_89517587	0.289231	Sox2	ENSMUST00000041761.5|Prss23|ENSMUSG00000039405.6|protease, serine, 23
mm10_v2_chr3_+_81996922_81996922	0.288379	Sox2	ENSMUST00000029641.3|Asic5|ENSMUSG00000028008.4|acid-sensing (proton-gated) ion channel family member 5
mm10_v2_chr5_+_111417263_111417442	0.288269	Sox2	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr13_-_97747399_97747414	0.286614	Sox2	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr11_-_76217490_76217664	0.28568	Sox2	ENSMUST00000102500.4|Gemin4|ENSMUSG00000049396.6|gem (nuclear organelle) associated protein 4
mm10_v2_chr4_+_127021311_127021339	0.285315	Sox2	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr10_+_106470281_106470367	0.284816	Sox2	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr13_-_99412816_99412864	0.283623	Sox2	ENSMUST00000180808.1|6430562O15Rik|ENSMUSG00000097828.1|RIKEN cDNA 6430562O15 gene
mm10_v2_chr8_+_122376676_122376701	0.282299	Sox2	ENSMUST00000176629.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr5_+_122643878_122644009	0.281508	Sox2	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr7_-_127875633_127875673	0.280806	Sox2	ENSMUST00000106261.1|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668 	ENSMUST00000144721.1|Zfp668|ENSMUSG00000049728.8|zinc finger protein 668
mm10_v2_chr1_-_158356258_158356313	0.280365	Sox2	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr1_+_59516264_59516264	0.279984	Sox2	ENSMUST00000114243.1|Gm973|ENSMUSG00000047361.9|predicted gene 973
mm10_v2_chr2_+_118900377_118900397	0.279029	Sox2	ENSMUST00000151162.1|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr8_+_45628176_45628219	0.279021	Sox2	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr9_-_60838200_60838200	0.278681	Sox2	ENSMUST00000063858.7|Gm9869|ENSMUSG00000052143.7|predicted gene 9869
mm10_v2_chr14_+_59201418_59201503	0.278381	Sox2	ENSMUST00000140136.2|Rcbtb1|ENSMUSG00000035469.11|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 	ENSMUST00000142326.1|Rcbtb1|ENSMUSG00000035469.11|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm10_v2_chr3_+_34649987_34650005	0.278236	Sox2	ENSMUST00000099151.2|Sox2|ENSMUSG00000074637.4|SRY-box containing gene 2
mm10_v2_chr6_-_99666762_99666786	0.277282	Sox2	ENSMUST00000032151.2|Eif4e3|ENSMUSG00000093661.1|eukaryotic translation initiation factor 4E member 3
mm10_v2_chr11_+_51261719_51261731	0.276503	Sox2	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr1_-_51915968_51916071	0.276146	Sox2	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr16_-_11066141_11066165	0.276127	Sox2	ENSMUST00000162323.1|Litaf|ENSMUSG00000022500.8|LPS-induced TN factor
mm10_v2_chr7_-_105787567_105787654	0.275464	Sox2	ENSMUST00000144189.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr10_+_42860348_42860377	0.275141	Sox2	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr11_-_51606840_51606857	0.273968	Sox2	ENSMUST00000074669.3|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B 	ENSMUST00000101249.2|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B 	ENSMUST00000109103.3|Hnrnpab|ENSMUSG00000020358.11|heterogeneous nuclear ribonucleoprotein A/B
mm10_v2_chr13_-_86046901_86046904	0.273612	Sox2	ENSMUST00000131011.1|Cox7c|ENSMUSG00000017778.8|cytochrome c oxidase subunit VIIc
mm10_v2_chr5_+_148265307_148265345	0.273107	Sox2	ENSMUST00000110514.1|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr1_-_55226768_55226813	0.273079	Sox2	ENSMUST00000027121.8|Rftn2|ENSMUSG00000025978.8|raftlin family member 2 	ENSMUST00000114428.2|Rftn2|ENSMUSG00000025978.8|raftlin family member 2
mm10_v2_chr3_-_107931817_107931885	0.273034	Sox2	ENSMUST00000004137.4|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr1_+_66322102_66322119	0.272659	Sox2	ENSMUST00000123647.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr4_+_86053887_86053987	0.272517	Sox2	ENSMUST00000107178.2|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000048885.5|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000141889.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000120678.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1
mm10_v2_chr8_-_105289465_105289541	0.272311	Sox2	ENSMUST00000171788.1|4931428F04Rik|ENSMUSG00000014837.8|RIKEN cDNA 4931428F04 gene 	ENSMUST00000014981.6|4931428F04Rik|ENSMUSG00000014837.8|RIKEN cDNA 4931428F04 gene
mm10_v2_chr2_+_52857844_52857868	0.271372	Sox2	ENSMUST00000090952.4|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000049483.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000050719.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2
mm10_v2_chr2_-_30474199_30474222	0.271023	Sox2	ENSMUST00000065134.2|Ier5l|ENSMUSG00000089762.2|immediate early response 5-like
mm10_v2_chr3_+_13946368_13946379	0.270571	Sox2	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chr14_-_33447142_33447179	0.269976	Sox2	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr17_-_35673738_35673750	0.269602	Sox2	ENSMUST00000001565.8|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr9_+_90163057_90163101	0.269601	Sox2	ENSMUST00000113059.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 	ENSMUST00000167122.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm10_v2_chr10_-_69212996_69213098	0.268618	Sox2	ENSMUST00000170048.1|A930033H14Rik|ENSMUSG00000090622.1|RIKEN cDNA A930033H14 gene
mm10_v2_chr19_+_8967031_8967050	0.268049	Sox2	ENSMUST00000052248.7|Eef1g|ENSMUSG00000071644.4|eukaryotic translation elongation factor 1 gamma
mm10_v2_chr17_-_23835743_23835743	0.266286	Sox2	ENSMUST00000059906.6|Prss33|ENSMUSG00000049620.8|protease, serine, 33
mm10_v2_chr3_+_88615367_88615434	0.265522	Sox2	ENSMUST00000176539.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr2_-_45110241_45110265	0.265509	Sox2	ENSMUST00000177302.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr9_-_57262591_57262609	0.265359	Sox2	ENSMUST00000034846.5|1700017B05Rik|ENSMUSG00000032300.6|RIKEN cDNA 1700017B05 gene
mm10_v2_chr2_+_120476911_120476976	0.265145	Sox2	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr9_+_35267857_35267894	0.264942	Sox2	ENSMUST00000034543.4|Rpusd4|ENSMUSG00000032044.4|RNA pseudouridylate synthase domain containing 4
mm10_v2_chr16_+_65815508_65815633	0.264064	Sox2	ENSMUST00000168064.1|Vgll3|ENSMUSG00000091243.1|vestigial like 3 (Drosophila)
mm10_v2_chr10_+_116301374_116301428	0.263725	Sox2	ENSMUST00000092167.5|Ptprb|ENSMUSG00000020154.9|protein tyrosine phosphatase, receptor type, B
mm10_v2_chr11_+_6389330_6389397	0.26214	Sox2	ENSMUST00000012612.4|Zmiz2|ENSMUSG00000041164.9|zinc finger, MIZ-type containing 2
mm10_v2_chr1_+_6730051_6730117	0.262054	Sox2	ENSMUST00000043578.6|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131467.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000150761.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000151281.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr3_-_50443603_50443615	0.25896	Sox2	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr8_+_46490968_46490995	0.25785	Sox2	ENSMUST00000110372.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1 	ENSMUST00000130563.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr1_-_51915901_51915958	0.257724	Sox2	ENSMUST00000018561.7|Myo1b|ENSMUSG00000018417.8|myosin IB 	ENSMUST00000114537.2|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr7_+_139248477_139248532	0.257662	Sox2	ENSMUST00000093993.3|Pwwp2b|ENSMUSG00000060260.6|PWWP domain containing 2B 	ENSMUST00000172136.1|Pwwp2b|ENSMUSG00000060260.6|PWWP domain containing 2B
mm10_v2_chr4_+_155839675_155839684	0.257651	Sox2	ENSMUST00000141883.1|Mxra8|ENSMUSG00000029070.3|matrix-remodelling associated 8
mm10_v2_chr6_+_34029421_34029456	0.2575	Sox2	ENSMUST00000070189.3|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing 	ENSMUST00000101564.2|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing
mm10_v2_chr11_+_64979025_64979110	0.256605	Sox2	ENSMUST00000071891.5|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli) 	ENSMUST00000108697.1|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli) 	ENSMUST00000101049.2|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli)
mm10_v2_chr2_-_156111863_156111943	0.256503	Sox2	ENSMUST00000154889.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000079312.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000153634.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000133921.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000131377.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000183518.1|RP23-220D12.12|ENSMUSG00000098950.1|RNA-binding protein 12  	ENSMUST00000184265.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109607.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109608.2|Cpne1|ENSMUSG00000074643.6|copine I
mm10_v2_chr11_+_70432627_70432707	0.255667	Sox2	ENSMUST00000084954.6|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2 	ENSMUST00000108568.3|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2 	ENSMUST00000079056.2|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2 	ENSMUST00000102564.4|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2 	ENSMUST00000124943.1|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2 	ENSMUST00000150076.1|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2 	ENSMUST00000102563.1|Arrb2|ENSMUSG00000060216.9|arrestin, beta 2
mm10_v2_chr1_+_15287259_15287259	0.255233	Sox2	ENSMUST00000175681.1|Kcnb2|ENSMUSG00000092083.3|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr7_+_99381495_99381555	0.254947	Sox2	ENSMUST00000037528.8|Gdpd5|ENSMUSG00000035314.8|glycerophosphodiester phosphodiesterase domain containing 5
mm10_v2_chr17_-_35701937_35701964	0.252488	Sox2	ENSMUST00000155628.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chrX_-_23285532_23285578	0.252485	Sox2	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr7_-_105482197_105482216	0.252195	Sox2	ENSMUST00000047040.2|Prkcdbp|ENSMUSG00000037060.2|protein kinase C, delta binding protein
mm10_v2_chr1_+_66364623_66364663	0.251138	Sox2	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr2_-_126675538_126675592	0.249245	Sox2	ENSMUST00000103227.1|Gabpb1|ENSMUSG00000027361.9|GA repeat binding protein, beta 1 	ENSMUST00000110425.2|Gabpb1|ENSMUSG00000027361.9|GA repeat binding protein, beta 1 	ENSMUST00000089745.4|Gabpb1|ENSMUSG00000027361.9|GA repeat binding protein, beta 1
mm10_v2_chr17_+_45563928_45563973	0.24833	Sox2	ENSMUST00000041353.6|Slc35b2|ENSMUSG00000037089.9|solute carrier family 35, member B2
mm10_v2_chr11_+_6389442_6389471	0.247874	Sox2	ENSMUST00000109786.1|Zmiz2|ENSMUSG00000041164.9|zinc finger, MIZ-type containing 2
mm10_v2_chr4_-_107253513_107253532	0.247865	Sox2	ENSMUST00000030360.4|Lrrc42|ENSMUSG00000028617.4|leucine rich repeat containing 42
mm10_v2_chr2_+_30078213_30078213	0.246641	Sox2	ENSMUST00000150770.1|Pkn3|ENSMUSG00000026785.8|protein kinase N3
mm10_v2_chrX_-_38576166_38576187	0.246611	Sox2	ENSMUST00000050083.5|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr7_+_120982496_120982514	0.245504	Sox2	ENSMUST00000033166.3|4933427G17Rik|ENSMUSG00000030877.4|RIKEN cDNA 4933427G17 gene
mm10_v2_chr11_-_61175020_61175060	0.244694	Sox2	ENSMUST00000041683.8|Usp22|ENSMUSG00000042506.9|ubiquitin specific peptidase 22
mm10_v2_chr2_-_79908428_79908438	0.244395	Sox2	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr11_-_11890368_11890379	0.243789	Sox2	ENSMUST00000155690.1|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chr9_-_121995962_121996041	0.243234	Sox2	ENSMUST00000084743.5|Pomgnt2|ENSMUSG00000066235.6|protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
mm10_v2_chr15_+_99702278_99702312	0.243205	Sox2	ENSMUST00000023759.4|Smarcd1|ENSMUSG00000023018.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm10_v2_chr10_-_8518801_8518851	0.242338	Sox2	ENSMUST00000061601.7|Ust|ENSMUSG00000047712.7|uronyl-2-sulfotransferase
mm10_v2_chr9_+_22099271_22099287	0.241711	Sox2	ENSMUST00000001384.4|Cnn1|ENSMUSG00000001349.4|calponin 1
mm10_v2_chr11_+_60699718_60699750	0.240308	Sox2	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr2_+_167538192_167538210	0.239905	Sox2	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chr10_+_42860648_42860676	0.239709	Sox2	ENSMUST00000105495.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr1_+_133246092_133246099	0.239114	Sox2	ENSMUST00000038295.8|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6 	ENSMUST00000105082.2|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6
mm10_v2_chr11_-_94973447_94973489	0.238882	Sox2	ENSMUST00000100551.4|Sgca|ENSMUSG00000001508.9|sarcoglycan, alpha (dystrophin-associated glycoprotein) 	ENSMUST00000152042.1|Sgca|ENSMUSG00000001508.9|sarcoglycan, alpha (dystrophin-associated glycoprotein)
mm10_v2_chr4_+_137862270_137862321	0.238486	Sox2	ENSMUST00000130407.1|Ece1|ENSMUSG00000057530.8|endothelin converting enzyme 1
mm10_v2_chr7_+_119900099_119900108	0.23719	Sox2	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr17_-_35909626_35909700	0.236961	Sox2	ENSMUST00000141132.1|Atat1|ENSMUSG00000024426.11|alpha tubulin acetyltransferase 1
mm10_v2_chr13_-_95618442_95618475	0.235751	Sox2	ENSMUST00000059193.5|F2r|ENSMUSG00000048376.5|coagulation factor II (thrombin) receptor
mm10_v2_chr9_-_110117303_110117353	0.235464	Sox2	ENSMUST00000136969.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr11_-_74590065_74590158	0.235222	Sox2	ENSMUST00000145524.1|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2 	ENSMUST00000047488.7|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2
mm10_v2_chr12_-_112829351_112829426	0.23507	Sox2	ENSMUST00000062092.5|Cdca4|ENSMUSG00000047832.8|cell division cycle associated 4
mm10_v2_chr7_-_63938862_63938933	0.234315	Sox2	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr2_+_32621750_32621774	0.234188	Sox2	ENSMUST00000113278.2|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr17_-_34615776_34615793	0.234099	Sox2	ENSMUST00000168353.2|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chr13_+_16014457_16014475	0.232622	Sox2	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr1_-_165934900_165935036	0.232602	Sox2	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr3_-_158016419_158016453	0.232181	Sox2	ENSMUST00000127778.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr5_+_142960343_142960363	0.231946	Sox2	ENSMUST00000031565.8|Fscn1|ENSMUSG00000029581.8|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm10_v2_chr16_-_76373827_76373852	0.231904	Sox2	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr7_-_127615226_127615272	0.231555	Sox2	ENSMUST00000084564.3|Zfp629|ENSMUSG00000045639.8|zinc finger protein 629
mm10_v2_chr11_-_102819114_102819214	0.231413	Sox2	ENSMUST00000068933.5|Gjc1|ENSMUSG00000034520.8|gap junction protein, gamma 1
mm10_v2_chr2_+_18672384_18672482	0.230041	Sox2	ENSMUST00000171845.1|Commd3|ENSMUSG00000051154.5|COMM domain containing 3 	ENSMUST00000061158.4|Commd3|ENSMUSG00000051154.5|COMM domain containing 3
mm10_v2_chr3_-_96058446_96058466	0.228681	Sox2	ENSMUST00000015891.5|Vps45|ENSMUSG00000015747.5|vacuolar protein sorting 45 (yeast)
mm10_v2_chr12_+_110601439_110601452	0.228592	Sox2	ENSMUST00000018851.7|Dync1h1|ENSMUSG00000018707.7|dynein cytoplasmic 1 heavy chain 1
mm10_v2_chr10_-_39122277_39122314	0.228574	Sox2	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr18_+_37300799_37300835	0.228574	Sox2	ENSMUST00000051754.1|Pcdhb3|ENSMUSG00000045498.1|protocadherin beta 3
mm10_v2_chrX_+_166238923_166239024	0.227093	Sox2	ENSMUST00000060210.7|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112233.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr2_-_26294550_26294561	0.227011	Sox2	ENSMUST00000057224.3|4932418E24Rik|ENSMUSG00000048038.6|RIKEN cDNA 4932418E24 gene
mm10_v2_chrX_-_18461371_18461402	0.22651	Sox2	ENSMUST00000044188.4|4930578C19Rik|ENSMUSG00000037358.6|RIKEN cDNA 4930578C19 gene
mm10_v2_chr4_+_57637816_57637846	0.22631	Sox2	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr4_+_45203921_45203931	0.225082	Sox2	ENSMUST00000107804.1|Frmpd1|ENSMUSG00000035615.6|FERM and PDZ domain containing 1
mm10_v2_chr15_-_91049823_91049948	0.22457	Sox2	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr11_+_60699758_60699845	0.223094	Sox2	ENSMUST00000108719.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr19_+_11518493_11518559	0.22249	Sox2	ENSMUST00000025580.3|Ms4a6b|ENSMUSG00000024677.7|membrane-spanning 4-domains, subfamily A, member 6B
mm10_v2_chr4_+_140701466_140701509	0.22189	Sox2	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr5_-_91402905_91402994	0.221037	Sox2	ENSMUST00000121044.2|Btc|ENSMUSG00000082361.3|betacellulin, epidermal growth factor family member
mm10_v2_chr14_+_31019183_31019214	0.220988	Sox2	ENSMUST00000052239.5|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr1_-_85961029_85961073	0.219725	Sox2	ENSMUST00000086975.4|Gpr55|ENSMUSG00000049608.7|G protein-coupled receptor 55
mm10_v2_chr10_-_84533968_84534036	0.21924	Sox2	ENSMUST00000167671.1|Ckap4|ENSMUSG00000046841.4|cytoskeleton-associated protein 4
mm10_v2_chr14_-_55722223_55722264	0.219222	Sox2	ENSMUST00000163889.1|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit
mm10_v2_chr8_+_105170668_105170686	0.219049	Sox2	ENSMUST00000109395.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109394.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000052209.2|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109392.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta
mm10_v2_chr7_+_24507122_24507139	0.218994	Sox2	ENSMUST00000177205.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chrX_-_23365044_23365090	0.21853	Sox2	ENSMUST00000115313.1|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr12_-_73113407_73113456	0.21749	Sox2	ENSMUST00000175693.1|Six4|ENSMUSG00000034460.8|sine oculis-related homeobox 4
mm10_v2_chr4_-_156197479_156197496	0.217085	Sox2	ENSMUST00000075787.6|Agrn|ENSMUSG00000041936.12|agrin 	ENSMUST00000180572.1|Agrn|ENSMUSG00000041936.12|agrin
mm10_v2_chr7_-_83884289_83884341	0.21612	Sox2	ENSMUST00000094216.3|Mesdc1|ENSMUSG00000070462.3|mesoderm development candidate 1
mm10_v2_chr11_-_70220969_70221027	0.215683	Sox2	ENSMUST00000060010.2|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr15_+_75704280_75704394	0.215642	Sox2	ENSMUST00000121137.1|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1 	ENSMUST00000023244.5|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1
mm10_v2_chr6_+_39873271_39873271	0.214832	Sox2	ENSMUST00000180886.1|Tmem178b|ENSMUSG00000057716.6|transmembrane protein 178B
mm10_v2_chr5_-_104982656_104982718	0.21327	Sox2	ENSMUST00000031239.6|Abcg3|ENSMUSG00000029299.8|ATP-binding cassette, sub-family G (WHITE), member 3
mm10_v2_chr17_+_26252915_26252983	0.212626	Sox2	ENSMUST00000114976.2|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like 	ENSMUST00000140427.1|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like 	ENSMUST00000119928.1|Luc7l|ENSMUSG00000024188.9|Luc7 homolog (S. cerevisiae)-like
mm10_v2_chr5_+_148265202_148265263	0.212623	Sox2	ENSMUST00000110515.2|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr11_+_20631956_20632006	0.212169	Sox2	ENSMUST00000109586.2|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr11_-_100613334_100613368	0.211013	Sox2	ENSMUST00000146840.1|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr13_+_91741507_91741531	0.210391	Sox2	ENSMUST00000022120.4|Acot12|ENSMUSG00000021620.4|acyl-CoA thioesterase 12
mm10_v2_chrX_-_38576189_38576204	0.210325	Sox2	ENSMUST00000115118.1|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr7_-_132317198_132317228	0.209925	Sox2	ENSMUST00000080215.5|Chst15|ENSMUSG00000030930.7|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
mm10_v2_chr10_+_39369750_39369804	0.209899	Sox2	ENSMUST00000063091.6|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000099967.3|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene 	ENSMUST00000126486.1|Fyn|ENSMUSG00000019843.8|Fyn proto-oncogene
mm10_v2_chr19_-_37330613_37330613	0.209728	Sox2	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr5_+_34336928_34336937	0.209111	Sox2	ENSMUST00000182047.1|Rnf4|ENSMUSG00000029110.7|ring finger protein 4
mm10_v2_chr7_-_126594941_126595037	0.208673	Sox2	ENSMUST00000058429.5|Il27|ENSMUSG00000044701.5|interleukin 27
mm10_v2_chr3_+_19957037_19957073	0.207588	Sox2	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr6_+_125096145_125096162	0.206112	Sox2	ENSMUST00000112390.1|Chd4|ENSMUSG00000063870.6|chromodomain helicase DNA binding protein 4
mm10_v2_chr18_+_37307445_37307462	0.205986	Sox2	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr4_+_107830958_107830985	0.205962	Sox2	ENSMUST00000106731.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chr11_-_69900949_69901001	0.205896	Sox2	ENSMUST00000102580.3|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr9_+_85842852_85842880	0.204973	Sox2	ENSMUST00000098500.3|Tpbg|ENSMUSG00000035274.7|trophoblast glycoprotein
mm10_v2_chr8_+_86745679_86745699	0.204752	Sox2	ENSMUST00000098532.2|Gm10638|ENSMUSG00000074178.2|predicted gene 10638
mm10_v2_chr11_-_87074055_87074071	0.204521	Sox2	ENSMUST00000020804.7|Gdpd1|ENSMUSG00000061666.6|glycerophosphodiester phosphodiesterase domain containing 1
mm10_v2_chr8_-_84800024_84800283	0.203757	Sox2	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr7_-_127615208_127615219	0.203203	Sox2	ENSMUST00000122066.1|Zfp629|ENSMUSG00000045639.8|zinc finger protein 629
mm10_v2_chr6_+_29281138_29281148	0.202963	Sox2	ENSMUST00000115286.2|Fam71f2|ENSMUSG00000079652.2|family with sequence similarity 71, member F2
mm10_v2_chr13_-_77131276_77131329	0.20123	Sox2	ENSMUST00000159300.1|Ankrd32|ENSMUSG00000021597.10|ankyrin repeat domain 32
mm10_v2_chr19_+_5740885_5740904	0.20043	Sox2	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr5_+_143548700_143548756	0.200267	Sox2	ENSMUST00000169329.1|Fam220a|ENSMUSG00000048910.9|family with sequence similarity 220, member A 	ENSMUST00000067145.5|Fam220a|ENSMUSG00000048910.9|family with sequence similarity 220, member A 	ENSMUST00000119488.1|Fam220a|ENSMUSG00000083012.2|family with sequence similarity 220, member A 	ENSMUST00000118121.1|Fam220a|ENSMUSG00000083012.2|family with sequence similarity 220, member A
mm10_v2_chr18_+_12741324_12741355	0.199898	Sox2	ENSMUST00000115857.2|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000121018.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000119108.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
mm10_v2_chr4_+_149518216_149518277	0.199214	Sox2	ENSMUST00000030839.6|Ctnnbip1|ENSMUSG00000028988.7|catenin beta interacting protein 1
mm10_v2_chr15_-_44428303_44428337	0.199041	Sox2	ENSMUST00000038719.6|Nudcd1|ENSMUSG00000038736.9|NudC domain containing 1
mm10_v2_chr15_-_98534221_98534305	0.198346	Sox2	ENSMUST00000116400.2|Kansl2|ENSMUSG00000022992.10|KAT8 regulatory NSL complex subunit 2 	ENSMUST00000023727.10|Kansl2|ENSMUSG00000022992.10|KAT8 regulatory NSL complex subunit 2
mm10_v2_chr10_+_67185730_67185768	0.197339	Sox2	ENSMUST00000173689.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chrX_+_109095359_109095391	0.197292	Sox2	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chr5_-_135934590_135934613	0.196938	Sox2	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr16_-_3908596_3908623	0.19626	Sox2	ENSMUST00000123235.2|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr10_-_128645965_128645991	0.196041	Sox2	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr7_+_126760591_126760599	0.195551	Sox2	ENSMUST00000091328.2|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3
mm10_v2_chr11_-_58938851_58938923	0.195402	Sox2	ENSMUST00000094151.5|Rnf187|ENSMUSG00000020496.8|ring finger protein 187
mm10_v2_chr1_-_93305850_93305915	0.195287	Sox2	ENSMUST00000112944.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000112942.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000027492.7|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2
mm10_v2_chr2_-_20968881_20968957	0.195198	Sox2	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr10_+_89873497_89873672	0.195171	Sox2	ENSMUST00000183156.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182936.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099368.4|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr1_-_54926311_54926402	0.194323	Sox2	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr5_-_8622855_8622952	0.193223	Sox2	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr12_-_45074112_45074306	0.193166	Sox2	ENSMUST00000120531.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn) 	ENSMUST00000143376.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr17_-_24644933_24644976	0.192246	Sox2	ENSMUST00000019684.5|Slc9a3r2|ENSMUSG00000002504.8|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm10_v2_chr11_+_102393403_102393496	0.19164	Sox2	ENSMUST00000107105.2|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000107102.1|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000107103.1|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000006750.7|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A
mm10_v2_chr11_+_32533290_32533305	0.191367	Sox2	ENSMUST00000102821.3|Stk10|ENSMUSG00000020272.8|serine/threonine kinase 10
mm10_v2_chr11_-_11890394_11890408	0.19134	Sox2	ENSMUST00000109659.2|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chr6_+_29735667_29735694	0.190524	Sox2	ENSMUST00000001812.4|Smo|ENSMUSG00000001761.6|smoothened homolog (Drosophila)
mm10_v2_chr6_+_83034173_83034252	0.188601	Sox2	ENSMUST00000000707.2|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3 	ENSMUST00000101257.3|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3
mm10_v2_chr10_+_94550852_94550876	0.18829	Sox2	ENSMUST00000148910.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3 	ENSMUST00000117460.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr12_+_75308308_75308322	0.188264	Sox2	ENSMUST00000118602.1|Rhoj|ENSMUSG00000046768.7|ras homolog gene family, member J 	ENSMUST00000118966.1|Rhoj|ENSMUSG00000046768.7|ras homolog gene family, member J 	ENSMUST00000055390.5|Rhoj|ENSMUSG00000046768.7|ras homolog gene family, member J
mm10_v2_chr2_+_27677234_27677295	0.188144	Sox2	ENSMUST00000166775.1|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr11_+_3649494_3649494	0.187926	Sox2	ENSMUST00000093389.2|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr11_+_3488275_3488287	0.187578	Sox2	ENSMUST00000064265.6|Pla2g3|ENSMUSG00000034579.11|phospholipase A2, group III
mm10_v2_chr17_-_25433263_25433307	0.1874	Sox2	ENSMUST00000159623.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm10_v2_chr10_-_116473418_116473514	0.187312	Sox2	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr12_-_45074457_45074493	0.186834	Sox2	ENSMUST00000053768.6|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr9_+_3335470_3335501	0.186287	Sox2	ENSMUST00000053407.5|Alkbh8|ENSMUSG00000025899.7|alkB, alkylation repair homolog 8 (E. coli)
mm10_v2_chr16_+_94370618_94370784	0.18533	Sox2	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr2_-_176917518_176917518	0.183509	Sox2	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr15_+_76343504_76343558	0.183298	Sox2	ENSMUST00000023210.6|Cyc1|ENSMUSG00000022551.7|cytochrome c-1
mm10_v2_chr7_-_134341975_134341996	0.181797	Sox2	ENSMUST00000106129.2|D7Ertd443e|ENSMUSG00000030994.9|DNA segment, Chr 7, ERATO Doi 443, expressed
mm10_v2_chr4_-_155785864_155785880	0.181252	Sox2	ENSMUST00000097742.2|Tmem88b|ENSMUSG00000073680.2|transmembrane protein 88B
mm10_v2_chr17_-_35697971_35698001	0.181048	Sox2	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr9_+_45430293_45430379	0.180877	Sox2	ENSMUST00000034592.8|Dscaml1|ENSMUSG00000032087.9|Down syndrome cell adhesion molecule like 1
mm10_v2_chr5_-_50058908_50059010	0.180848	Sox2	ENSMUST00000030971.5|Gpr125|ENSMUSG00000029090.8|G protein-coupled receptor 125
mm10_v2_chr10_-_84533884_84533896	0.180653	Sox2	ENSMUST00000053871.3|Ckap4|ENSMUSG00000046841.4|cytoskeleton-associated protein 4
mm10_v2_chr10_-_79874565_79874634	0.180624	Sox2	ENSMUST00000167250.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000092325.4|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr15_-_98918131_98918231	0.180166	Sox2	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr6_+_15185439_15185452	0.179329	Sox2	ENSMUST00000118133.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr5_-_123684289_123684379	0.178127	Sox2	ENSMUST00000111564.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1 	ENSMUST00000063905.5|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr16_+_37776873_37776873	0.177798	Sox2	ENSMUST00000114763.2|Fstl1|ENSMUSG00000022816.5|follistatin-like 1
mm10_v2_chr7_-_27195727_27195768	0.177477	Sox2	ENSMUST00000163311.2|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A 	ENSMUST00000126211.1|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A
mm10_v2_chr5_-_98030727_98030765	0.177171	Sox2	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr4_+_53779694_53779706	0.177103	Sox2	ENSMUST00000030124.3|Tal2|ENSMUSG00000028417.3|T cell acute lymphocytic leukemia 2
mm10_v2_chrX_+_101429555_101429708	0.176085	Sox2	ENSMUST00000033673.6|Nono|ENSMUSG00000031311.11|non-POU-domain-containing, octamer binding protein
mm10_v2_chr10_+_69925800_69925824	0.176051	Sox2	ENSMUST00000182029.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr11_+_69846610_69846659	0.175412	Sox2	ENSMUST00000152566.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3 	ENSMUST00000108633.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr2_+_28513243_28513326	0.174976	Sox2	ENSMUST00000028170.8|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr3_+_14886426_14886426	0.174928	Sox2	ENSMUST00000029078.7|Car2|ENSMUSG00000027562.7|carbonic anhydrase 2
mm10_v2_chr7_-_102494773_102494773	0.174575	Sox2	ENSMUST00000058750.3|Olfr545|ENSMUSG00000044824.5|olfactory receptor 545
mm10_v2_chr13_-_8858762_8858829	0.173699	Sox2	ENSMUST00000176329.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr7_+_112679314_112679325	0.173505	Sox2	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr6_+_51470510_51470530	0.173173	Sox2	ENSMUST00000031862.7|Cbx3|ENSMUSG00000029836.9|chromobox 3
mm10_v2_chr6_+_122513583_122513641	0.172433	Sox2	ENSMUST00000032210.7|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5 	ENSMUST00000148517.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr8_-_84687839_84687884	0.172422	Sox2	ENSMUST00000001975.4|Nacc1|ENSMUSG00000001910.4|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm10_v2_chr3_-_38484831_38484864	0.172215	Sox2	ENSMUST00000120875.1|Ankrd50|ENSMUSG00000044864.10|ankyrin repeat domain 50
mm10_v2_chr11_-_116168138_116168205	0.172092	Sox2	ENSMUST00000139020.1|Fbf1|ENSMUSG00000020776.12|Fas (TNFRSF6) binding factor 1 	ENSMUST00000103031.1|Fbf1|ENSMUSG00000020776.12|Fas (TNFRSF6) binding factor 1 	ENSMUST00000124828.1|Fbf1|ENSMUSG00000020776.12|Fas (TNFRSF6) binding factor 1
mm10_v2_chr18_+_52767994_52768149	0.171417	Sox2	ENSMUST00000025413.7|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000163742.2|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin) 	ENSMUST00000178011.1|Sncaip|ENSMUSG00000024534.9|synuclein, alpha interacting protein (synphilin)
mm10_v2_chr7_+_112679327_112679373	0.171348	Sox2	ENSMUST00000106638.2|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr15_+_27466647_27466696	0.171069	Sox2	ENSMUST00000022875.6|Ank|ENSMUSG00000022265.6|progressive ankylosis
mm10_v2_chr9_+_6168601_6168617	0.170155	Sox2	ENSMUST00000168039.1|Pdgfd|ENSMUSG00000032006.8|platelet-derived growth factor, D polypeptide
mm10_v2_chr2_-_165034821_165034867	0.170131	Sox2	ENSMUST00000153905.1|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5 	ENSMUST00000040381.8|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5
mm10_v2_chr3_-_158031705_158031774	0.169773	Sox2	ENSMUST00000072875.8|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr6_+_40491238_40491238	0.169073	Sox2	ENSMUST00000064932.4|Tas2r137|ENSMUSG00000052850.4|taste receptor, type 2, member 137
mm10_v2_chr11_-_68386974_68387012	0.168981	Sox2	ENSMUST00000135141.1|Ntn1|ENSMUSG00000020902.6|netrin 1
mm10_v2_chr8_+_12947935_12947962	0.168645	Sox2	ENSMUST00000110871.1|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like
mm10_v2_chr17_-_34121944_34121988	0.168285	Sox2	ENSMUST00000151986.1|Brd2|ENSMUSG00000024335.13|bromodomain containing 2
mm10_v2_chr17_+_55445375_55445389	0.168038	Sox2	ENSMUST00000133899.1|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2 	ENSMUST00000086878.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr15_+_6386598_6386785	0.167766	Sox2	ENSMUST00000080880.5|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110664.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110663.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161812.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000160134.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr2_+_37516618_37516634	0.167658	Sox2	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
mm10_v2_chr11_-_114960417_114960474	0.167558	Sox2	ENSMUST00000092466.5|Cd300c|ENSMUSG00000058728.8|CD300C antigen 	ENSMUST00000061637.3|Cd300c|ENSMUSG00000058728.8|CD300C antigen
mm10_v2_chr5_-_114380459_114380487	0.167156	Sox2	ENSMUST00000001125.5|Kctd10|ENSMUSG00000001098.9|potassium channel tetramerisation domain containing 10
mm10_v2_chr2_+_125505089_125505089	0.167011	Sox2	ENSMUST00000066157.1|Gm9913|ENSMUSG00000053615.1|predicted gene 9913
mm10_v2_chr9_-_110117379_110117445	0.166892	Sox2	ENSMUST00000111991.2|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000149199.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000035056.7|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000148287.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30 	ENSMUST00000127744.1|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chr11_-_74590186_74590215	0.166873	Sox2	ENSMUST00000102521.1|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2
mm10_v2_chr7_+_45215753_45215852	0.166684	Sox2	ENSMUST00000033060.6|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000155313.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000107801.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr9_+_21616166_21616177	0.166574	Sox2	ENSMUST00000034707.8|Smarca4|ENSMUSG00000032187.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 	ENSMUST00000098948.3|Smarca4|ENSMUSG00000032187.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm10_v2_chr1_+_165788681_165788728	0.166467	Sox2	ENSMUST00000161971.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000178336.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000005907.5|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000027849.4|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr6_+_54039935_54040039	0.166421	Sox2	ENSMUST00000114403.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr19_+_30030589_30030634	0.166344	Sox2	ENSMUST00000112552.1|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chr2_-_37443096_37443178	0.166295	Sox2	ENSMUST00000102789.2|Zbtb26|ENSMUSG00000050714.8|zinc finger and BTB domain containing 26 	ENSMUST00000067043.4|Zbtb26|ENSMUSG00000050714.8|zinc finger and BTB domain containing 26 	ENSMUST00000112932.1|Zbtb6|ENSMUSG00000066798.3|zinc finger and BTB domain containing 6
mm10_v2_chr2_-_125859139_125859221	0.165887	Sox2	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr9_+_102720287_102720336	0.164849	Sox2	ENSMUST00000130602.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr5_+_108065742_108065767	0.164817	Sox2	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr11_-_69900930_69900941	0.164737	Sox2	ENSMUST00000018714.6|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000128046.1|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr17_-_25273366_25273383	0.164455	Sox2	ENSMUST00000173084.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr7_+_24507099_24507110	0.164077	Sox2	ENSMUST00000177228.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr19_-_40588374_40588426	0.163853	Sox2	ENSMUST00000175932.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1 	ENSMUST00000176955.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1 	ENSMUST00000149476.2|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1
mm10_v2_chr15_+_44428073_44428174	0.163699	Sox2	ENSMUST00000060652.3|Eny2|ENSMUSG00000022338.6|enhancer of yellow 2 homolog (Drosophila)
mm10_v2_chr6_+_125552948_125552980	0.163432	Sox2	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr2_-_180042401_180042438	0.163258	Sox2	ENSMUST00000029082.8|Psma7|ENSMUSG00000027566.8|proteasome (prosome, macropain) subunit, alpha type 7
mm10_v2_chr9_+_108508005_108508076	0.162757	Sox2	ENSMUST00000006838.8|Qars|ENSMUSG00000032604.8|glutaminyl-tRNA synthetase 	ENSMUST00000134939.1|Qars|ENSMUSG00000032604.8|glutaminyl-tRNA synthetase
mm10_v2_chr12_+_111039334_111039400	0.161652	Sox2	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr4_-_136602641_136602760	0.161408	Sox2	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr19_-_41848076_41848132	0.160264	Sox2	ENSMUST00000059231.2|Frat2|ENSMUSG00000047604.2|frequently rearranged in advanced T cell lymphomas 2
mm10_v2_chr11_-_120990871_120991037	0.160113	Sox2	ENSMUST00000154483.1|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr6_-_88875035_88875053	0.160102	Sox2	ENSMUST00000145944.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr13_-_78196373_78196440	0.159726	Sox2	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr10_+_69925766_69925786	0.159437	Sox2	ENSMUST00000182269.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000183261.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000183074.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chrX_-_53370470_53370502	0.159027	Sox2	ENSMUST00000096447.2|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1 	ENSMUST00000023836.3|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1
mm10_v2_chr3_+_153973436_153973520	0.15899	Sox2	ENSMUST00000089948.5|Slc44a5|ENSMUSG00000028360.9|solute carrier family 44, member 5
mm10_v2_chr10_+_4266323_4266341	0.15875	Sox2	ENSMUST00000045730.5|Akap12|ENSMUSG00000038587.8|A kinase (PRKA) anchor protein (gravin) 12
mm10_v2_chr6_-_49264014_49264060	0.158254	Sox2	ENSMUST00000031841.7|Tra2a|ENSMUSG00000029817.9|transformer 2 alpha homolog (Drosophila)
mm10_v2_chr4_+_108459389_108459451	0.157628	Sox2	ENSMUST00000106673.1|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11 	ENSMUST00000043368.5|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr2_-_79456750_79456761	0.156951	Sox2	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr9_-_66069702_66069741	0.156314	Sox2	ENSMUST00000044711.5|Snx22|ENSMUSG00000039452.5|sorting nexin 22
mm10_v2_chr9_+_21616230_21616281	0.155766	Sox2	ENSMUST00000174008.1|Smarca4|ENSMUSG00000032187.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm10_v2_chr7_+_80860909_80860972	0.155032	Sox2	ENSMUST00000132163.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2 	ENSMUST00000147125.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2
mm10_v2_chr15_-_50882806_50882822	0.154357	Sox2	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr14_+_75845093_75845165	0.154019	Sox2	ENSMUST00000110894.2|Tpt1|ENSMUSG00000060126.8|tumor protein, translationally-controlled 1
mm10_v2_chr7_+_12881165_12881204	0.153239	Sox2	ENSMUST00000144578.1|Zfp128|ENSMUSG00000060397.6|zinc finger protein 128
mm10_v2_chr1_-_181183739_181183739	0.153052	Sox2	ENSMUST00000159290.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26
mm10_v2_chr9_-_72111651_72111712	0.152059	Sox2	ENSMUST00000185117.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr9_-_79759849_79759856	0.151994	Sox2	ENSMUST00000034881.6|Cox7a2|ENSMUSG00000032330.6|cytochrome c oxidase subunit VIIa 2
mm10_v2_chr14_-_15438974_15439002	0.151908	Sox2	ENSMUST00000055211.4|Lrrc3b|ENSMUSG00000045201.5|leucine rich repeat containing 3B
mm10_v2_chr2_-_113758638_113758655	0.151806	Sox2	ENSMUST00000099575.3|Grem1|ENSMUSG00000074934.3|gremlin 1
mm10_v2_chr3_+_95111013_95111087	0.15163	Sox2	ENSMUST00000009102.8|Vps72|ENSMUSG00000008958.8|vacuolar protein sorting 72 (yeast)
mm10_v2_chr9_-_112187898_112187938	0.151533	Sox2	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr3_-_119783262_119783388	0.151318	Sox2	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr8_+_33731867_33731946	0.150773	Sox2	ENSMUST00000170705.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr3_-_10351313_10351342	0.150168	Sox2	ENSMUST00000108377.1|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1 	ENSMUST00000037839.5|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1
mm10_v2_chr11_+_80383309_80383336	0.149958	Sox2	ENSMUST00000108216.1|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr4_+_132638987_132639118	0.149638	Sox2	ENSMUST00000135299.1|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000081726.6|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000180250.1|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000020197.7|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila) 	ENSMUST00000079157.4|Eya3|ENSMUSG00000028886.9|eyes absent 3 homolog (Drosophila)
mm10_v2_chr10_+_57650977_57650985	0.149611	Sox2	ENSMUST00000066028.6|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr15_-_96699698_96699717	0.14925	Sox2	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr6_+_90178716_90178716	0.149231	Sox2	ENSMUST00000079832.2|Vmn1r52|ENSMUSG00000060816.2|vomeronasal 1 receptor 52
mm10_v2_chr4_-_148287927_148287965	0.148907	Sox2	ENSMUST00000047720.8|Ptchd2|ENSMUSG00000041544.11|patched domain containing 2
mm10_v2_chr10_-_81025406_81025411	0.148154	Sox2	ENSMUST00000055125.4|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr1_+_133045984_133046082	0.147009	Sox2	ENSMUST00000077730.5|Pik3c2b|ENSMUSG00000026447.10|phosphoinositide-3-kinase, class 2, beta polypeptide
mm10_v2_chr7_+_105368230_105368230	0.146402	Sox2	ENSMUST00000098152.2|Olfr692|ENSMUSG00000073906.2|olfactory receptor 692
mm10_v2_chr15_+_75940952_75941015	0.146124	Sox2	ENSMUST00000037260.6|Zfp623|ENSMUSG00000050846.8|zinc finger protein 623
mm10_v2_chr2_+_102706356_102706438	0.146051	Sox2	ENSMUST00000123759.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000111212.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000005220.4|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr3_+_14578609_14578687	0.145497	Sox2	ENSMUST00000029069.6|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5 	ENSMUST00000165922.2|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5
mm10_v2_chr7_-_126475082_126475130	0.144545	Sox2	ENSMUST00000032978.6|Sh2b1|ENSMUSG00000030733.9|SH2B adaptor protein 1
mm10_v2_chr10_-_82622926_82623137	0.144359	Sox2	ENSMUST00000176200.1|1190007I07Rik|ENSMUSG00000063320.5|RIKEN cDNA 1190007I07 gene 	ENSMUST00000183416.1|1190007I07Rik|ENSMUSG00000063320.5|RIKEN cDNA 1190007I07 gene
mm10_v2_chr14_-_52197216_52197267	0.143966	Sox2	ENSMUST00000046709.7|Supt16|ENSMUSG00000035726.7|suppressor of Ty 16
mm10_v2_chr3_+_95624971_95625021	0.143521	Sox2	ENSMUST00000058230.6|Ensa|ENSMUSG00000038619.6|endosulfine alpha 	ENSMUST00000037983.4|Ensa|ENSMUSG00000038619.6|endosulfine alpha
mm10_v2_chr15_-_98871175_98871204	0.14351	Sox2	ENSMUST00000178486.2|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D 	ENSMUST00000023741.9|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D
mm10_v2_chr15_-_37007382_37007402	0.143416	Sox2	ENSMUST00000078976.7|Zfp706|ENSMUSG00000062397.7|zinc finger protein 706
mm10_v2_chr14_-_55722176_55722211	0.143041	Sox2	ENSMUST00000169237.1|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit 	ENSMUST00000062861.7|Rabggta|ENSMUSG00000040472.8|Rab geranylgeranyl transferase, a subunit
mm10_v2_chr1_-_44118757_44118816	0.142618	Sox2	ENSMUST00000027213.7|Kdelc1|ENSMUSG00000026047.7|KDEL (Lys-Asp-Glu-Leu) containing 1 	ENSMUST00000065767.2|Kdelc1|ENSMUSG00000026047.7|KDEL (Lys-Asp-Glu-Leu) containing 1
mm10_v2_chr2_-_119271202_119271272	0.142285	Sox2	ENSMUST00000037360.7|Rhov|ENSMUSG00000034226.7|ras homolog gene family, member V
mm10_v2_chr14_-_41008256_41008275	0.141474	Sox2	ENSMUST00000136661.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr17_-_57059795_57059863	0.140418	Sox2	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr10_+_69925484_69925532	0.140217	Sox2	ENSMUST00000182692.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092433.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr2_+_68861433_68861510	0.139189	Sox2	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr4_-_132212255_132212303	0.138691	Sox2	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr10_+_23938572_23938572	0.138388	Sox2	ENSMUST00000079134.4|Taar2|ENSMUSG00000059763.4|trace amine-associated receptor 2
mm10_v2_chr13_-_41220162_41220195	0.13785	Sox2	ENSMUST00000117096.1|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr7_-_78578308_78578408	0.137182	Sox2	ENSMUST00000039431.7|Ntrk3|ENSMUSG00000059146.6|neurotrophic tyrosine kinase, receptor, type 3
mm10_v2_chr7_-_105574324_105574402	0.137074	Sox2	ENSMUST00000081165.7|Apbb1|ENSMUSG00000037032.9|amyloid beta (A4) precursor protein-binding, family B, member 1
mm10_v2_chrX_+_56968120_56968120	0.136391	Sox2	ENSMUST00000145035.1|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr2_+_175010241_175010319	0.136331	Sox2	ENSMUST00000109069.1|Gm14444|ENSMUSG00000078906.3|predicted gene 14444 	ENSMUST00000109070.2|Gm14444|ENSMUSG00000078906.3|predicted gene 14444
mm10_v2_chr7_+_141949982_141950086	0.136027	Sox2	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr18_+_64340225_64340364	0.135547	Sox2	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr15_-_8710734_8710764	0.135258	Sox2	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr2_-_181698433_181698447	0.134869	Sox2	ENSMUST00000052416.3|4930526D03Rik|ENSMUSG00000045794.3|RIKEN cDNA 4930526D03 gene
mm10_v2_chr8_-_123515333_123515437	0.134506	Sox2	ENSMUST00000177240.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr2_-_146511992_146512015	0.133916	Sox2	ENSMUST00000109986.2|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr17_+_57358682_57358723	0.133853	Sox2	ENSMUST00000086763.5|Emr1|ENSMUSG00000004730.8|EGF-like module containing, mucin-like, hormone receptor-like sequence 1 	ENSMUST00000004850.7|Emr1|ENSMUSG00000004730.8|EGF-like module containing, mucin-like, hormone receptor-like sequence 1
mm10_v2_chr2_+_128967383_128967443	0.133751	Sox2	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr5_-_149053038_149053053	0.133719	Sox2	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr19_+_8953826_8953856	0.133531	Sox2	ENSMUST00000096239.5|Tut1|ENSMUSG00000071645.5|terminal uridylyl transferase 1, U6 snRNA-specific
mm10_v2_chr9_-_51328898_51328923	0.132912	Sox2	ENSMUST00000039959.4|1810046K07Rik|ENSMUSG00000036027.5|RIKEN cDNA 1810046K07 gene
mm10_v2_chr11_+_98203314_98203335	0.132759	Sox2	ENSMUST00000003203.7|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12 	ENSMUST00000107538.1|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12
mm10_v2_chr12_-_80643799_80643857	0.132502	Sox2	ENSMUST00000166931.1|Erh|ENSMUSG00000021131.7|enhancer of rudimentary homolog (Drosophila)
mm10_v2_chr8_+_123332676_123332740	0.132348	Sox2	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chr2_+_60209887_60210073	0.132264	Sox2	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr4_+_32238950_32238964	0.132019	Sox2	ENSMUST00000037416.6|Bach2|ENSMUSG00000040270.10|BTB and CNC homology 2
mm10_v2_chr13_+_93304799_93304935	0.131757	Sox2	ENSMUST00000080127.5|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr2_-_79908389_79908403	0.131419	Sox2	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr10_+_80150448_80150482	0.131061	Sox2	ENSMUST00000153477.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr1_-_135105210_135105276	0.130814	Sox2	ENSMUST00000044828.7|Lgr6|ENSMUSG00000042793.7|leucine-rich repeat-containing G protein-coupled receptor 6
mm10_v2_chr4_-_81442756_81442836	0.13045	Sox2	ENSMUST00000107262.1|Mpdz|ENSMUSG00000028402.11|multiple PDZ domain protein 	ENSMUST00000102830.3|Mpdz|ENSMUSG00000028402.11|multiple PDZ domain protein
mm10_v2_chr9_-_45906369_45906437	0.128071	Sox2	ENSMUST00000161187.1|Rnf214|ENSMUSG00000042790.9|ring finger protein 214
mm10_v2_chr5_+_43868802_43868866	0.127815	Sox2	ENSMUST00000030964.4|Cd38|ENSMUSG00000029084.4|CD38 antigen
mm10_v2_chr4_-_151861667_151861679	0.127814	Sox2	ENSMUST00000169423.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr4_+_116221689_116221698	0.127626	Sox2	ENSMUST00000106490.2|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr4_-_132212060_132212130	0.127565	Sox2	ENSMUST00000085181.4|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr5_+_115429944_115429997	0.127489	Sox2	ENSMUST00000067168.5|Msi1|ENSMUSG00000054256.5|musashi RNA-binding protein 1
mm10_v2_chr15_+_59648644_59648687	0.127149	Sox2	ENSMUST00000118228.1|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr5_+_35893319_35893426	0.126874	Sox2	ENSMUST00000064571.4|Afap1|ENSMUSG00000029094.5|actin filament associated protein 1
mm10_v2_chr6_-_72958465_72958496	0.126753	Sox2	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr14_+_66140919_66140962	0.126639	Sox2	ENSMUST00000022620.9|Chrna2|ENSMUSG00000022041.9|cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
mm10_v2_chr5_+_118065360_118065360	0.126048	Sox2	ENSMUST00000031305.3|Gm9754|ENSMUSG00000029360.3|predicted gene 9754
mm10_v2_chr14_+_34375504_34375582	0.125687	Sox2	ENSMUST00000111908.1|Mmrn2|ENSMUSG00000041445.8|multimerin 2
mm10_v2_chr4_-_132049058_132049156	0.124859	Sox2	ENSMUST00000105981.2|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000084253.3|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000141291.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr5_+_117976761_117976803	0.12478	Sox2	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr6_-_72958097_72958302	0.124768	Sox2	ENSMUST00000114049.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr13_-_97747373_97747384	0.123203	Sox2	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chrX_+_38189829_38189842	0.121709	Sox2	ENSMUST00000131124.1|Zbtb33|ENSMUSG00000048047.3|zinc finger and BTB domain containing 33
mm10_v2_chr16_+_31664130_31664178	0.121376	Sox2	ENSMUST00000023454.5|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila)
mm10_v2_chr5_+_42067960_42067960	0.120976	Sox2	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr3_+_88142328_88142483	0.120929	Sox2	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr2_+_158666690_158666740	0.120588	Sox2	ENSMUST00000103116.3|Ppp1r16b|ENSMUSG00000037754.7|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm10_v2_chr2_+_18677002_18677053	0.120432	Sox2	ENSMUST00000028071.6|Bmi1|ENSMUSG00000026739.7|Bmi1 polycomb ring finger oncogene
mm10_v2_chr4_-_154928545_154928571	0.12005	Sox2	ENSMUST00000152687.1|Tnfrsf14|ENSMUSG00000042333.8|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
mm10_v2_chr1_+_93990509_93990509	0.119675	Sox2	ENSMUST00000097632.3|Gm6086|ENSMUSG00000073608.3|predicted gene 6086
mm10_v2_chr17_+_35135695_35135781	0.119624	Sox2	ENSMUST00000174478.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000174281.2|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173550.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr15_+_85205949_85206045	0.11877	Sox2	ENSMUST00000057410.7|Fbln1|ENSMUSG00000006369.8|fibulin 1 	ENSMUST00000109432.3|Fbln1|ENSMUSG00000006369.8|fibulin 1
mm10_v2_chr1_-_132390301_132390373	0.118738	Sox2	ENSMUST00000132435.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr13_+_55635002_55635036	0.118565	Sox2	ENSMUST00000172272.1|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENSMUST00000099479.3|Ddx46|ENSMUSG00000021500.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm10_v2_chr2_-_77280589_77280648	0.117611	Sox2	ENSMUST00000102659.1|Sestd1|ENSMUSG00000042272.11|SEC14 and spectrin domains 1
mm10_v2_chr2_+_167932327_167932379	0.117606	Sox2	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr8_-_71395794_71395821	0.116595	Sox2	ENSMUST00000049184.7|Ushbp1|ENSMUSG00000034911.7|Usher syndrome 1C binding protein 1
mm10_v2_chr17_+_28530834_28530879	0.116185	Sox2	ENSMUST00000025060.2|Armc12|ENSMUSG00000024223.2|armadillo repeat containing 12
mm10_v2_chr11_+_69580359_69580382	0.115476	Sox2	ENSMUST00000005371.5|Trp53|ENSMUSG00000059552.7|transformation related protein 53 	ENSMUST00000108658.3|Trp53|ENSMUSG00000059552.7|transformation related protein 53 	ENSMUST00000171247.1|Trp53|ENSMUSG00000059552.7|transformation related protein 53
mm10_v2_chr13_+_70882948_70882948	0.115294	Sox2	ENSMUST00000022091.3|8030423J24Rik|ENSMUSG00000021600.3|RIKEN cDNA 8030423J24 gene
mm10_v2_chrX_-_12128350_12128367	0.114742	Sox2	ENSMUST00000123004.1|Bcor|ENSMUSG00000040363.8|BCL6 interacting corepressor
mm10_v2_chr5_-_112228900_112228929	0.11427	Sox2	ENSMUST00000182509.1|Miat|ENSMUSG00000097767.2|myocardial infarction associated transcript (non-protein coding)
mm10_v2_chr16_-_97763449_97763491	0.114154	Sox2	ENSMUST00000113743.1|Ripk4|ENSMUSG00000005251.8|receptor-interacting serine-threonine kinase 4
mm10_v2_chr9_+_90162978_90163037	0.113983	Sox2	ENSMUST00000113060.1|Adamts7|ENSMUSG00000032363.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm10_v2_chr6_-_56797637_56797757	0.113967	Sox2	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr11_+_101316200_101316275	0.113378	Sox2	ENSMUST00000142640.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) 	ENSMUST00000019470.7|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr7_+_75643223_75643319	0.111951	Sox2	ENSMUST00000137959.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr15_-_97831460_97831519	0.111174	Sox2	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr7_+_141949846_141949868	0.110629	Sox2	ENSMUST00000172652.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr4_-_118179628_118179682	0.109449	Sox2	ENSMUST00000097911.2|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chr3_+_88142536_88142572	0.109368	Sox2	ENSMUST00000107558.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000107559.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr6_-_144209471_144209487	0.109309	Sox2	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_168206875_168206922	0.108963	Sox2	ENSMUST00000057793.4|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr2_+_30266721_30266886	0.108293	Sox2	ENSMUST00000113645.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000133877.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000139719.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000113643.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1 	ENSMUST00000150695.1|Phyhd1|ENSMUSG00000079484.6|phytanoyl-CoA dioxygenase domain containing 1
mm10_v2_chr2_+_153065988_153066002	0.10818	Sox2	ENSMUST00000129377.1|Ccm2l|ENSMUSG00000027474.6|cerebral cavernous malformation 2-like 	ENSMUST00000109800.1|Ccm2l|ENSMUSG00000027474.6|cerebral cavernous malformation 2-like
mm10_v2_chr16_-_34513944_34514056	0.107867	Sox2	ENSMUST00000151491.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114960.2|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr12_+_119945957_119946133	0.107669	Sox2	ENSMUST00000058644.8|Tmem196|ENSMUSG00000048004.8|transmembrane protein 196
mm10_v2_chr13_+_100651607_100651631	0.107405	Sox2	ENSMUST00000167256.1|Taf9|ENSMUSG00000052293.8|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr6_-_88874597_88874796	0.106803	Sox2	ENSMUST00000061262.4|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000140455.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2 	ENSMUST00000145780.1|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr2_+_160731258_160731310	0.1065	Sox2	ENSMUST00000103115.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1
mm10_v2_chr14_+_52197502_52197518	0.104869	Sox2	ENSMUST00000180857.1|Gm26590|ENSMUSG00000097533.1|predicted gene, 26590
mm10_v2_chrX_+_139086226_139086250	0.104241	Sox2	ENSMUST00000033625.1|4930513O06Rik|ENSMUSG00000031270.1|RIKEN cDNA 4930513O06 gene
mm10_v2_chr16_+_18348181_18348274	0.103832	Sox2	ENSMUST00000115614.2|Arvcf|ENSMUSG00000000325.9|armadillo repeat gene deleted in velo-cardio-facial syndrome 	ENSMUST00000115613.1|Arvcf|ENSMUSG00000000325.9|armadillo repeat gene deleted in velo-cardio-facial syndrome 	ENSMUST00000090103.3|Arvcf|ENSMUSG00000000325.9|armadillo repeat gene deleted in velo-cardio-facial syndrome
mm10_v2_chr4_-_11254248_11254266	0.103669	Sox2	ENSMUST00000044616.3|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8 	ENSMUST00000108319.2|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8 	ENSMUST00000108318.2|Ints8|ENSMUSG00000040738.4|integrator complex subunit 8
mm10_v2_chr17_+_8340399_8340406	0.10244	Sox2	ENSMUST00000069742.6|Prr18|ENSMUSG00000055945.7|proline rich region 18
mm10_v2_chr2_-_165034770_165034820	0.102405	Sox2	ENSMUST00000122070.1|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5 	ENSMUST00000121377.1|Ncoa5|ENSMUSG00000039804.9|nuclear receptor coactivator 5
mm10_v2_chr6_+_124916863_124916863	0.102339	Sox2	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chr11_-_106750628_106750660	0.101949	Sox2	ENSMUST00000068021.2|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1
mm10_v2_chr17_+_31296191_31296253	0.101676	Sox2	ENSMUST00000165149.1|Slc37a1|ENSMUSG00000024036.9|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm10_v2_chr8_+_33732049_33732137	0.101674	Sox2	ENSMUST00000167264.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr18_+_3382979_3383065	0.101326	Sox2	ENSMUST00000025073.5|Cul2|ENSMUSG00000024231.8|cullin 2
mm10_v2_chr4_-_150652097_150652181	0.10113	Sox2	ENSMUST00000117997.1|Slc45a1|ENSMUSG00000039838.5|solute carrier family 45, member 1 	ENSMUST00000037827.3|Slc45a1|ENSMUSG00000039838.5|solute carrier family 45, member 1
mm10_v2_chr9_-_107872821_107872844	0.10075	Sox2	ENSMUST00000183032.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr11_+_80383397_80383415	0.100607	Sox2	ENSMUST00000053740.8|Zfp207|ENSMUSG00000017421.12|zinc finger protein 207
mm10_v2_chr17_-_32284088_32284123	0.100556	Sox2	ENSMUST00000119123.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000003726.8|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000121285.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000120276.1|Brd4|ENSMUSG00000024002.10|bromodomain containing 4 	ENSMUST00000114475.2|Brd4|ENSMUSG00000024002.10|bromodomain containing 4
mm10_v2_chr3_+_138443085_138443176	0.100142	Sox2	ENSMUST00000005964.2|Adh5|ENSMUSG00000028138.2|alcohol dehydrogenase 5 (class III), chi polypeptide
mm10_v2_chr11_-_69549108_69549108	0.100054	Sox2	ENSMUST00000108659.1|Dnah2|ENSMUSG00000005237.7|dynein, axonemal, heavy chain 2
mm10_v2_chr17_+_29032664_29032681	0.0996431	Sox2	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
mm10_v2_chr4_-_151861698_151861761	0.0992747	Sox2	ENSMUST00000049790.7|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr11_+_69580392_69580419	0.0992617	Sox2	ENSMUST00000108657.3|Trp53|ENSMUSG00000059552.7|transformation related protein 53
mm10_v2_chr4_+_48049080_48049114	0.0989928	Sox2	ENSMUST00000153369.1|Nr4a3|ENSMUSG00000028341.3|nuclear receptor subfamily 4, group A, member 3
mm10_v2_chr19_+_12460749_12460783	0.0988624	Sox2	ENSMUST00000081035.7|Mpeg1|ENSMUSG00000046805.9|macrophage expressed gene 1
mm10_v2_chr19_+_6364557_6364668	0.0983463	Sox2	ENSMUST00000155973.1|Sf1|ENSMUSG00000024949.11|splicing factor 1
mm10_v2_chr6_-_144209558_144209647	0.0983114	Sox2	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr17_-_25273562_25273638	0.0977516	Sox2	ENSMUST00000173621.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I 	ENSMUST00000172520.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr11_-_82890541_82890626	0.097747	Sox2	ENSMUST00000092844.6|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000021033.9|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000018985.8|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D
mm10_v2_chr3_+_40745332_40745382	0.0969934	Sox2	ENSMUST00000159819.1|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chr5_+_64230285_64230312	0.0969292	Sox2	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr8_+_33732237_33732339	0.0966692	Sox2	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr10_-_94944578_94944578	0.0965936	Sox2	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr1_-_25228814_25228834	0.096521	Sox2	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr14_+_54431597_54431673	0.096466	Sox2	ENSMUST00000089688.4|Mmp14|ENSMUSG00000000957.8|matrix metallopeptidase 14 (membrane-inserted)
mm10_v2_chr2_-_164389095_164389095	0.0963528	Sox2	ENSMUST00000167427.1|Slpi|ENSMUSG00000017002.8|secretory leukocyte peptidase inhibitor
mm10_v2_chr6_-_48048911_48048956	0.0954668	Sox2	ENSMUST00000095944.3|Zfp777|ENSMUSG00000071477.4|zinc finger protein 777
mm10_v2_chr10_+_37139558_37139558	0.0954194	Sox2	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr11_-_76577701_76577727	0.095253	Sox2	ENSMUST00000176179.1|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr2_-_167631972_167632095	0.0949817	Sox2	ENSMUST00000060645.6|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1 	ENSMUST00000140216.1|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1 	ENSMUST00000151365.1|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1 	ENSMUST00000109207.3|Ube2v1|ENSMUSG00000078923.4|ubiquitin-conjugating enzyme E2 variant 1
mm10_v2_chr7_-_109960385_109960433	0.0948764	Sox2	ENSMUST00000106722.1|Dennd5a|ENSMUSG00000035901.8|DENN/MADD domain containing 5A
mm10_v2_chr9_+_69989466_69989539	0.0945189	Sox2	ENSMUST00000034754.5|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000085393.6|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000117450.1|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2
mm10_v2_chr10_+_23851454_23851489	0.0945157	Sox2	ENSMUST00000020190.7|Vnn3|ENSMUSG00000020010.7|vanin 3
mm10_v2_chr2_-_118479635_118479711	0.0940455	Sox2	ENSMUST00000110862.1|Srp14|ENSMUSG00000009549.8|signal recognition particle 14 	ENSMUST00000009693.8|Srp14|ENSMUSG00000009549.8|signal recognition particle 14
mm10_v2_chr1_-_54194048_54194048	0.0940249	Sox2	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr12_+_8674681_8674765	0.0936159	Sox2	ENSMUST00000168361.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000169750.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000163730.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr19_-_7241216_7241226	0.0933705	Sox2	ENSMUST00000025675.9|Naa40|ENSMUSG00000024764.9|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
mm10_v2_chr2_+_27677201_27677229	0.0928051	Sox2	ENSMUST00000077257.5|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr9_+_65361049_65361060	0.0925056	Sox2	ENSMUST00000147185.1|Gm514|ENSMUSG00000086228.1|predicted gene 514
mm10_v2_chr9_-_65827544_65827576	0.0920783	Sox2	ENSMUST00000159109.1|Zfp609|ENSMUSG00000040524.9|zinc finger protein 609
mm10_v2_chr7_+_28825202_28825217	0.0918986	Sox2	ENSMUST00000066264.6|Ech1|ENSMUSG00000053898.6|enoyl coenzyme A hydratase 1, peroxisomal
mm10_v2_chr12_-_40248073_40248086	0.0916996	Sox2	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr12_+_113140198_113140257	0.0914047	Sox2	ENSMUST00000084882.4|Crip2|ENSMUSG00000006356.6|cysteine rich protein 2
mm10_v2_chr4_-_63403330_63403354	0.0913704	Sox2	ENSMUST00000035724.4|Akna|ENSMUSG00000039158.11|AT-hook transcription factor
mm10_v2_chr11_-_116454347_116454347	0.0911562	Sox2	ENSMUST00000093909.4|Qrich2|ENSMUSG00000070331.7|glutamine rich 2
mm10_v2_chr3_-_86999284_86999441	0.0908077	Sox2	ENSMUST00000063869.5|Cd1d1|ENSMUSG00000028076.6|CD1d1 antigen 	ENSMUST00000029717.2|Cd1d1|ENSMUSG00000028076.6|CD1d1 antigen
mm10_v2_chr7_-_109960461_109960477	0.0898192	Sox2	ENSMUST00000080437.6|Dennd5a|ENSMUSG00000035901.8|DENN/MADD domain containing 5A
mm10_v2_chr1_-_180330550_180330550	0.0896999	Sox2	ENSMUST00000050581.3|Gm5069|ENSMUSG00000055676.3|predicted pseudogene 5069
mm10_v2_chr8_+_65967157_65967191	0.0894949	Sox2	ENSMUST00000072482.6|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr18_-_34597468_34597468	0.0891708	Sox2	ENSMUST00000056932.2|4933408B17Rik|ENSMUSG00000049357.5|RIKEN cDNA 4933408B17 gene
mm10_v2_chr12_-_31713873_31713947	0.0886199	Sox2	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr2_+_163658370_163658510	0.0881186	Sox2	ENSMUST00000164399.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000064703.6|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000099105.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000152418.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000126182.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000131228.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chrX_+_101849375_101849393	0.0877105	Sox2	ENSMUST00000124279.1|Nhsl2|ENSMUSG00000079481.5|NHS-like 2
mm10_v2_chr19_+_8839298_8839346	0.0867369	Sox2	ENSMUST00000160556.1|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr9_-_107872687_107872747	0.0853486	Sox2	ENSMUST00000035201.6|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr16_-_91044473_91044543	0.0851121	Sox2	ENSMUST00000118522.1|Paxbp1|ENSMUSG00000022974.6|PAX3 and PAX7 binding protein 1
mm10_v2_chr17_-_70853482_70853546	0.0850349	Sox2	ENSMUST00000118283.1|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr6_-_119963733_119963836	0.0848886	Sox2	ENSMUST00000161512.2|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr8_+_109705549_109705636	0.0845008	Sox2	ENSMUST00000034163.8|Zfp821|ENSMUSG00000031728.9|zinc finger protein 821
mm10_v2_chr10_-_21160925_21160984	0.0840421	Sox2	ENSMUST00000020158.6|Myb|ENSMUSG00000019982.8|myeloblastosis oncogene
mm10_v2_chr4_-_126468580_126468653	0.0834762	Sox2	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr3_+_88621436_88621555	0.0831716	Sox2	ENSMUST00000170653.2|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2 	ENSMUST00000177303.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr1_-_190169399_190169526	0.0828921	Sox2	ENSMUST00000010319.7|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr12_+_86361112_86361131	0.082403	Sox2	ENSMUST00000116402.3|Esrrb|ENSMUSG00000021255.11|estrogen related receptor, beta
mm10_v2_chr4_+_141444654_141444714	0.082317	Sox2	ENSMUST00000006377.6|Zbtb17|ENSMUSG00000006215.6|zinc finger and BTB domain containing 17
mm10_v2_chr4_-_134012381_134012404	0.0821276	Sox2	ENSMUST00000176113.1|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr7_-_115846080_115846112	0.0818471	Sox2	ENSMUST00000166207.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr16_+_18877037_18877241	0.0814344	Sox2	ENSMUST00000120532.1|Hira|ENSMUSG00000022702.9|histone cell cycle regulation defective homolog A (S. cerevisiae) 	ENSMUST00000004222.7|Hira|ENSMUSG00000022702.9|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm10_v2_chr17_+_37002574_37002596	0.0812439	Sox2	ENSMUST00000173588.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr17_+_35241746_35241778	0.0811362	Sox2	ENSMUST00000068056.5|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 	ENSMUST00000174757.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr1_+_82839449_82839518	0.0808414	Sox2	ENSMUST00000113444.1|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1 	ENSMUST00000063380.4|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1
mm10_v2_chr11_+_83964419_83964478	0.0808335	Sox2	ENSMUST00000049714.8|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000092834.5|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183714.1|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183456.1|Synrg|ENSMUSG00000034940.9|synergin, gamma
mm10_v2_chr1_+_171895664_171895664	0.080558	Sox2	ENSMUST00000097466.2|Gm10521|ENSMUSG00000073492.2|predicted gene 10521
mm10_v2_chr15_-_73423180_73423218	0.0804572	Sox2	ENSMUST00000110036.2|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2 	ENSMUST00000170939.1|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2
mm10_v2_chr4_-_75278246_75278338	0.0802216	Sox2	ENSMUST00000030103.8|Tmem261|ENSMUSG00000028398.8|transmembrane protein 261
mm10_v2_chr19_+_5038826_5038938	0.0801236	Sox2	ENSMUST00000053705.6|B3gnt1|ENSMUSG00000047379.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
mm10_v2_chr10_-_62792243_62792368	0.0799238	Sox2	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chrX_+_7728439_7728510	0.0796499	Sox2	ENSMUST00000033489.7|Praf2|ENSMUSG00000031149.7|PRA1 domain family 2
mm10_v2_chrX_+_47912387_47912442	0.0794782	Sox2	ENSMUST00000001202.8|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe 	ENSMUST00000115020.1|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe
mm10_v2_chrX_-_136868537_136868755	0.0792875	Sox2	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr4_-_151861762_151861876	0.0789421	Sox2	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr15_+_92597104_92597121	0.0777215	Sox2	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr1_+_136131382_136131404	0.0776214	Sox2	ENSMUST00000075164.4|Kif21b|ENSMUSG00000041642.12|kinesin family member 21B
mm10_v2_chr10_+_80179482_80179531	0.0772797	Sox2	ENSMUST00000003154.6|Efna2|ENSMUSG00000003070.6|ephrin A2
mm10_v2_chr11_-_4118778_4118831	0.0772014	Sox2	ENSMUST00000003681.7|Sec14l2|ENSMUSG00000003585.7|SEC14-like 2 (S. cerevisiae)
mm10_v2_chr1_-_153487639_153487662	0.0768708	Sox2	ENSMUST00000042141.5|Dhx9|ENSMUSG00000042699.5|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm10_v2_chr5_+_52190650_52190704	0.0766523	Sox2	ENSMUST00000180601.1|9230114K14Rik|ENSMUSG00000097145.1|RIKEN cDNA 9230114K14 gene
mm10_v2_chr13_+_56702983_56703112	0.0766336	Sox2	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr5_+_143817786_143817818	0.0760438	Sox2	ENSMUST00000100487.4|Eif2ak1|ENSMUSG00000029613.9|eukaryotic translation initiation factor 2 alpha kinase 1
mm10_v2_chr1_+_97770158_97770209	0.0755884	Sox2	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr13_+_83573577_83573607	0.0752697	Sox2	ENSMUST00000185052.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr16_+_31663935_31664039	0.0752047	Sox2	ENSMUST00000100001.3|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila) 	ENSMUST00000064477.7|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila)
mm10_v2_chr11_-_88718078_88718104	0.0746744	Sox2	ENSMUST00000092794.5|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr7_+_79273201_79273270	0.0742738	Sox2	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr10_+_69925954_69926133	0.0742129	Sox2	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr19_-_4943049_4943127	0.0737281	Sox2	ENSMUST00000133254.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000120475.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000025834.7|Peli3|ENSMUSG00000024901.8|pellino 3
mm10_v2_chr11_+_61653259_61653353	0.0736744	Sox2	ENSMUST00000004959.2|Grap|ENSMUSG00000004837.2|GRB2-related adaptor protein
mm10_v2_chr2_+_84734050_84734107	0.0732358	Sox2	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chr15_-_77643270_77643286	0.0726786	Sox2	ENSMUST00000181154.1|Apol11b|ENSMUSG00000091694.2|apolipoprotein L 11b 	ENSMUST00000180949.1|Apol11b|ENSMUSG00000091694.2|apolipoprotein L 11b 	ENSMUST00000181467.1|Apol11b|ENSMUSG00000091694.2|apolipoprotein L 11b 	ENSMUST00000166623.2|Apol11b|ENSMUSG00000091694.2|apolipoprotein L 11b
mm10_v2_chr9_-_20976762_20976793	0.0724489	Sox2	ENSMUST00000054197.5|S1pr2|ENSMUSG00000043895.5|sphingosine-1-phosphate receptor 2
mm10_v2_chr9_-_57765845_57765876	0.0723029	Sox2	ENSMUST00000065330.6|Clk3|ENSMUSG00000032316.7|CDC-like kinase 3
mm10_v2_chr18_-_43393346_43393381	0.0721598	Sox2	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr11_-_106920359_106920643	0.0719888	Sox2	ENSMUST00000167787.1|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2 	ENSMUST00000092517.2|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr11_-_62789445_62789478	0.0718833	Sox2	ENSMUST00000054654.6|Zfp286|ENSMUSG00000047342.10|zinc finger protein 286
mm10_v2_chr2_+_49451486_49451559	0.0718298	Sox2	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr11_+_49663603_49663621	0.0715722	Sox2	ENSMUST00000043873.3|Scgb3a1|ENSMUSG00000064057.6|secretoglobin, family 3A, member 1 	ENSMUST00000076006.4|Scgb3a1|ENSMUSG00000064057.6|secretoglobin, family 3A, member 1
mm10_v2_chr2_+_156721037_156721062	0.0714162	Sox2	ENSMUST00000109566.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000146412.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000177013.1|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000171030.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr9_+_59617284_59617301	0.0711586	Sox2	ENSMUST00000026267.8|Parp6|ENSMUSG00000025237.9|poly (ADP-ribose) polymerase family, member 6 	ENSMUST00000050483.7|Parp6|ENSMUSG00000025237.9|poly (ADP-ribose) polymerase family, member 6
mm10_v2_chrX_+_136822781_136822840	0.07113	Sox2	ENSMUST00000113085.1|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr17_+_34238896_34238911	0.0708657	Sox2	ENSMUST00000095342.3|H2-Ob|ENSMUSG00000041538.9|histocompatibility 2, O region beta locus
mm10_v2_chr3_+_90476121_90476220	0.0705177	Sox2	ENSMUST00000001042.8|Ilf2|ENSMUSG00000001016.8|interleukin enhancer binding factor 2
mm10_v2_chr15_+_10952332_10952364	0.0703493	Sox2	ENSMUST00000022853.8|C1qtnf3|ENSMUSG00000058914.6|C1q and tumor necrosis factor related protein 3 	ENSMUST00000110523.1|C1qtnf3|ENSMUSG00000058914.6|C1q and tumor necrosis factor related protein 3
mm10_v2_chr1_+_153900572_153900606	0.0699098	Sox2	ENSMUST00000139476.1|Glul|ENSMUSG00000026473.9|glutamate-ammonia ligase (glutamine synthetase)
mm10_v2_chr9_+_55150050_55150083	0.0697688	Sox2	ENSMUST00000122441.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr5_+_3543812_3543853	0.0692824	Sox2	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr11_-_19018956_19018973	0.0690321	Sox2	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr2_-_116067391_116067444	0.0682841	Sox2	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr19_-_40588338_40588371	0.0681553	Sox2	ENSMUST00000176939.1|Aldh18a1|ENSMUSG00000025007.7|aldehyde dehydrogenase 18 family, member A1
mm10_v2_chr2_+_30441831_30441853	0.067396	Sox2	ENSMUST00000131476.1|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53)
mm10_v2_chr13_+_43615710_43615788	0.0663537	Sox2	ENSMUST00000059986.2|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr9_+_45906513_45906569	0.0661614	Sox2	ENSMUST00000039059.6|Pcsk7|ENSMUSG00000035382.8|proprotein convertase subtilisin/kexin type 7
mm10_v2_chr2_+_32629467_32629514	0.0657878	Sox2	ENSMUST00000068271.4|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr1_+_135840857_135840878	0.0656058	Sox2	ENSMUST00000179863.1|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac 	ENSMUST00000112086.2|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac 	ENSMUST00000112087.2|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac 	ENSMUST00000112085.2|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac 	ENSMUST00000178854.1|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac 	ENSMUST00000027671.5|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac
mm10_v2_chr14_+_31019159_31019178	0.0653809	Sox2	ENSMUST00000112094.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000144009.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr2_+_156721009_156721031	0.065235	Sox2	ENSMUST00000131157.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr10_+_36974558_36974579	0.0649807	Sox2	ENSMUST00000105510.1|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr6_-_144209448_144209469	0.0646152	Sox2	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr15_+_86058727_86058793	0.0642655	Sox2	ENSMUST00000138134.1|Gramd4|ENSMUSG00000035900.12|GRAM domain containing 4
mm10_v2_chr9_-_102354685_102354699	0.0636675	Sox2	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr19_+_40831248_40831292	0.0633991	Sox2	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr3_-_127499095_127499137	0.0630283	Sox2	ENSMUST00000182594.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr1_-_190170178_190170237	0.0630189	Sox2	ENSMUST00000177288.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr9_-_88482532_88482587	0.0626595	Sox2	ENSMUST00000173801.1|Syncrip|ENSMUSG00000032423.6|synaptotagmin binding, cytoplasmic RNA interacting protein 	ENSMUST00000069221.5|Syncrip|ENSMUSG00000032423.6|synaptotagmin binding, cytoplasmic RNA interacting protein 	ENSMUST00000172508.1|Syncrip|ENSMUSG00000032423.6|synaptotagmin binding, cytoplasmic RNA interacting protein
mm10_v2_chr7_-_47133395_47133437	0.06259	Sox2	ENSMUST00000107617.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr2_+_32646586_32646602	0.0624423	Sox2	ENSMUST00000009705.7|Eng|ENSMUSG00000026814.10|endoglin 	ENSMUST00000167841.1|Eng|ENSMUSG00000026814.10|endoglin
mm10_v2_chr11_-_98729374_98729435	0.0617534	Sox2	ENSMUST00000126565.1|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000100500.2|Med24|ENSMUSG00000017210.8|mediator complex subunit 24 	ENSMUST00000017354.6|Med24|ENSMUSG00000017210.8|mediator complex subunit 24
mm10_v2_chr16_-_85550417_85550432	0.0614909	Sox2	ENSMUST00000175700.1|Cyyr1|ENSMUSG00000041134.9|cysteine and tyrosine-rich protein 1 	ENSMUST00000114174.2|Cyyr1|ENSMUSG00000041134.9|cysteine and tyrosine-rich protein 1
mm10_v2_chr19_-_10949238_10949277	0.0614567	Sox2	ENSMUST00000025639.6|Ccdc86|ENSMUSG00000024732.6|coiled-coil domain containing 86
mm10_v2_chr14_-_32388355_32388396	0.0612513	Sox2	ENSMUST00000100723.2|1700024G13Rik|ENSMUSG00000072473.3|RIKEN cDNA 1700024G13 gene
mm10_v2_chr5_+_137350162_137350177	0.0611024	Sox2	ENSMUST00000111055.2|Ephb4|ENSMUSG00000029710.9|Eph receptor B4
mm10_v2_chr10_+_56377300_56377338	0.0601912	Sox2	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr19_+_47937648_47937712	0.0587979	Sox2	ENSMUST00000066308.7|Ccdc147|ENSMUSG00000046585.8|coiled-coil domain containing 147
mm10_v2_chr1_-_180813591_180813632	0.0583859	Sox2	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr10_-_116896879_116896956	0.0578914	Sox2	ENSMUST00000048229.7|Myrfl|ENSMUSG00000034057.7|myelin regulatory factor-like
mm10_v2_chr16_-_97763712_97763780	0.0577059	Sox2	ENSMUST00000019386.8|Ripk4|ENSMUSG00000005251.8|receptor-interacting serine-threonine kinase 4
mm10_v2_chr9_+_38773088_38773088	0.0575055	Sox2	ENSMUST00000062124.3|Olfr921|ENSMUSG00000049926.3|olfactory receptor 921
mm10_v2_chr5_-_140830430_140830453	0.0570596	Sox2	ENSMUST00000000153.4|Gna12|ENSMUSG00000000149.6|guanine nucleotide binding protein, alpha 12
mm10_v2_chr5_+_21543525_21543590	0.0565581	Sox2	ENSMUST00000035651.4|Lrrc17|ENSMUSG00000039883.4|leucine rich repeat containing 17
mm10_v2_chr2_-_57114970_57115038	0.0558038	Sox2	ENSMUST00000028166.2|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr9_+_65214690_65214690	0.0556708	Sox2	ENSMUST00000069000.7|Parp16|ENSMUSG00000032392.10|poly (ADP-ribose) polymerase family, member 16
mm10_v2_chr7_-_133122615_133122762	0.0547179	Sox2	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr10_+_57650990_57651010	0.0545804	Sox2	ENSMUST00000175852.1|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr12_-_111713185_111713257	0.0542878	Sox2	ENSMUST00000054636.6|Bag5|ENSMUSG00000049792.6|BCL2-associated athanogene 5
mm10_v2_chr2_-_114052804_114052887	0.0541493	Sox2	ENSMUST00000090269.6|Actc1|ENSMUSG00000068614.7|actin, alpha, cardiac muscle 1
mm10_v2_chr5_-_142906702_142906754	0.0537457	Sox2	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr6_+_28215555_28215576	0.0527049	Sox2	ENSMUST00000143099.1|6530409C15Rik|ENSMUSG00000043340.3|RIKEN cDNA 6530409C15 gene 	ENSMUST00000143551.1|6530409C15Rik|ENSMUSG00000043340.3|RIKEN cDNA 6530409C15 gene
mm10_v2_chr4_+_109235632_109235632	0.0517556	Sox2	ENSMUST00000030285.7|Calr4|ENSMUSG00000028558.8|calreticulin 4
mm10_v2_chr17_-_87446854_87446935	0.0515657	Sox2	ENSMUST00000040440.6|Calm2|ENSMUSG00000036438.6|calmodulin 2
mm10_v2_chr17_-_25273534_25273557	0.0515206	Sox2	ENSMUST00000174031.1|Ube2i|ENSMUSG00000015120.9|ubiquitin-conjugating enzyme E2I
mm10_v2_chr18_+_35965036_35965087	0.0508476	Sox2	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr10_-_127341583_127341614	0.05052	Sox2	ENSMUST00000026474.3|Gli1|ENSMUSG00000025407.6|GLI-Kruppel family member GLI1
mm10_v2_chr16_-_85901118_85901133	0.0504652	Sox2	ENSMUST00000023611.5|Adamts5|ENSMUSG00000022894.5|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm10_v2_chr6_+_86404336_86404473	0.0496061	Sox2	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr16_-_46120238_46120254	0.0490562	Sox2	ENSMUST00000023336.9|Cd96|ENSMUSG00000022657.9|CD96 antigen
mm10_v2_chr11_-_68386821_68386835	0.0490014	Sox2	ENSMUST00000021284.3|Ntn1|ENSMUSG00000020902.6|netrin 1
mm10_v2_chr10_-_63244135_63244170	0.0485055	Sox2	ENSMUST00000054837.3|1700120B22Rik|ENSMUSG00000045391.3|RIKEN cDNA 1700120B22 gene
mm10_v2_chr6_+_92092369_92092433	0.0484176	Sox2	ENSMUST00000113463.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr16_-_17911303_17911354	0.0478027	Sox2	ENSMUST00000003621.8|Dgcr14|ENSMUSG00000003527.8|DiGeorge syndrome critical region gene 14
mm10_v2_chr1_-_136346074_136346145	0.0474257	Sox2	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr18_+_36793918_36793937	0.0467387	Sox2	ENSMUST00000001419.8|Zmat2|ENSMUSG00000001383.8|zinc finger, matrin type 2
mm10_v2_chr6_-_99266494_99266540	0.0463195	Sox2	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr11_+_116918844_116918888	0.0456466	Sox2	ENSMUST00000103027.3|Mgat5b|ENSMUSG00000043857.10|mannoside acetylglucosaminyltransferase 5, isoenzyme B
mm10_v2_chr2_+_160645881_160645896	0.0454797	Sox2	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr9_+_50768228_50768271	0.045375	Sox2	ENSMUST00000042391.6|Fdxacb1|ENSMUSG00000037845.8|ferredoxin-fold anticodon binding domain containing 1
mm10_v2_chr13_+_49341549_49341623	0.0453346	Sox2	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr11_-_76468396_76468473	0.0451652	Sox2	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr14_+_49172202_49172254	0.0450482	Sox2	ENSMUST00000153488.1|Naa30|ENSMUSG00000036282.8|N(alpha)-acetyltransferase 30, NatC catalytic subunit
mm10_v2_chr6_+_122513676_122513688	0.0445559	Sox2	ENSMUST00000142896.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5 	ENSMUST00000121656.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr10_-_39986625_39986648	0.0442637	Sox2	ENSMUST00000170579.1|BC021785|ENSMUSG00000038528.8|cDNA sequence BC021785 	ENSMUST00000045524.6|BC021785|ENSMUSG00000038528.8|cDNA sequence BC021785 	ENSMUST00000073618.5|BC021785|ENSMUSG00000038528.8|cDNA sequence BC021785 	ENSMUST00000164566.1|BC021785|ENSMUSG00000038528.8|cDNA sequence BC021785
mm10_v2_chrX_-_133688978_133689005	0.0437405	Sox2	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr11_-_99230998_99231019	0.0436738	Sox2	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr2_-_6884940_6884957	0.0436642	Sox2	ENSMUST00000183091.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182851.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr4_-_44167580_44167608	0.0435152	Sox2	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr18_+_80046854_80046904	0.0427895	Sox2	ENSMUST00000070219.7|Pard6g|ENSMUSG00000056214.8|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm10_v2_chr3_+_19957088_19957114	0.0424485	Sox2	ENSMUST00000108328.1|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr16_+_31663841_31663912	0.0423236	Sox2	ENSMUST00000115201.1|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila)
mm10_v2_chr4_+_155694311_155694375	0.0420795	Sox2	ENSMUST00000099265.2|B930041F14Rik|ENSMUSG00000074738.2|RIKEN cDNA B930041F14 gene
mm10_v2_chr3_-_146651304_146651327	0.0417268	Sox2	ENSMUST00000149825.1|4930503B20Rik|ENSMUSG00000090202.1|RIKEN cDNA 4930503B20 gene 	ENSMUST00000049703.5|4930503B20Rik|ENSMUSG00000090202.1|RIKEN cDNA 4930503B20 gene
mm10_v2_chr2_+_119675062_119675095	0.0415053	Sox2	ENSMUST00000028767.8|Rtf1|ENSMUSG00000027304.9|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr17_+_35241838_35241870	0.0414238	Sox2	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr5_-_137836210_137836268	0.0413705	Sox2	ENSMUST00000110980.1|Pilra|ENSMUSG00000046245.7|paired immunoglobin-like type 2 receptor alpha 	ENSMUST00000058897.4|Pilra|ENSMUSG00000046245.7|paired immunoglobin-like type 2 receptor alpha
mm10_v2_chr15_+_100154379_100154411	0.0413205	Sox2	ENSMUST00000023768.6|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila) 	ENSMUST00000108971.2|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr10_+_36974536_36974556	0.0408794	Sox2	ENSMUST00000019911.7|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr13_-_117025505_117025541	0.0407627	Sox2	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr1_-_30949756_30949770	0.0399449	Sox2	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr9_-_112187766_112187862	0.0399156	Sox2	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr11_-_62731865_62731910	0.0397922	Sox2	ENSMUST00000150336.1|Zfp287|ENSMUSG00000005267.7|zinc finger protein 287
mm10_v2_chr4_+_57434247_57434368	0.0396726	Sox2	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chrX_+_92489949_92489949	0.0395194	Sox2	ENSMUST00000096371.2|Gm5941|ENSMUSG00000071726.2|predicted gene 5941
mm10_v2_chr12_+_76370266_76370266	0.0385332	Sox2	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr12_+_3365108_3365142	0.0374457	Sox2	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr17_+_47505211_47505241	0.0374012	Sox2	ENSMUST00000182935.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3 	ENSMUST00000182506.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr4_-_82705735_82705754	0.0368131	Sox2	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr2_-_121380940_121380947	0.0363876	Sox2	ENSMUST00000038389.8|Strc|ENSMUSG00000033498.8|stereocilin
mm10_v2_chr11_+_97450136_97450180	0.0363387	Sox2	ENSMUST00000107601.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr13_+_93304940_93305278	0.0363116	Sox2	ENSMUST00000109497.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109498.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000060490.4|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109492.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109496.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109495.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr5_+_24364804_24364824	0.0359191	Sox2	ENSMUST00000030834.4|Nos3|ENSMUSG00000028978.6|nitric oxide synthase 3, endothelial cell 	ENSMUST00000115090.1|Nos3|ENSMUSG00000028978.6|nitric oxide synthase 3, endothelial cell
mm10_v2_chr10_-_12861735_12861735	0.0354441	Sox2	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr2_+_160731684_160731760	0.0353732	Sox2	ENSMUST00000174885.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1 	ENSMUST00000109462.1|Plcg1|ENSMUSG00000016933.11|phospholipase C, gamma 1
mm10_v2_chr11_-_50916136_50916179	0.0352403	Sox2	ENSMUST00000116378.1|Zfp2|ENSMUSG00000049321.11|zinc finger protein 2 	ENSMUST00000109128.1|Zfp2|ENSMUSG00000049321.11|zinc finger protein 2
mm10_v2_chr13_+_4191163_4191200	0.0348649	Sox2	ENSMUST00000021634.2|Akr1c13|ENSMUSG00000021213.5|aldo-keto reductase family 1, member C13
mm10_v2_chr19_+_5041337_5041416	0.0348538	Sox2	ENSMUST00000116567.2|Brms1|ENSMUSG00000080268.3|breast cancer metastasis-suppressor 1
mm10_v2_chr2_+_37443273_37443339	0.0341289	Sox2	ENSMUST00000133434.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000061179.5|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chr13_+_13784278_13784365	0.0334009	Sox2	ENSMUST00000021734.7|Gng4|ENSMUSG00000021303.7|guanine nucleotide binding protein (G protein), gamma 4
mm10_v2_chr18_+_11839220_11839475	0.0322498	Sox2	ENSMUST00000171109.1|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1 	ENSMUST00000046948.8|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1
mm10_v2_chr9_+_106821874_106821994	0.0320502	Sox2	ENSMUST00000159645.1|Vprbp|ENSMUSG00000040325.10|Vpr (HIV-1) binding protein
mm10_v2_chr16_-_18289199_18289260	0.0310758	Sox2	ENSMUST00000009321.4|Dgcr8|ENSMUSG00000022718.5|DiGeorge syndrome critical region gene 8 	ENSMUST00000115633.1|Dgcr8|ENSMUSG00000022718.5|DiGeorge syndrome critical region gene 8
mm10_v2_chr2_-_26910569_26910677	0.0306061	Sox2	ENSMUST00000015920.5|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000139815.1|Med22|ENSMUSG00000015776.6|mediator complex subunit 22 	ENSMUST00000102899.3|Med22|ENSMUSG00000015776.6|mediator complex subunit 22
mm10_v2_chr4_+_116221590_116221618	0.03	Sox2	ENSMUST00000147292.1|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr1_+_86526688_86526736	0.0286903	Sox2	ENSMUST00000045897.8|Ptma|ENSMUSG00000026238.8|prothymosin alpha
mm10_v2_chr6_-_28831747_28831747	0.028503	Sox2	ENSMUST00000062304.5|Lrrc4|ENSMUSG00000049939.5|leucine rich repeat containing 4
mm10_v2_chr2_-_35432552_35432633	0.0281597	Sox2	ENSMUST00000079424.4|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr9_+_123774540_123774601	0.0277032	Sox2	ENSMUST00000180093.1|Ccr9|ENSMUSG00000029530.9|chemokine (C-C motif) receptor 9
mm10_v2_chr6_+_86404257_86404319	0.0276716	Sox2	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chrX_+_136822671_136822780	0.0264778	Sox2	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr18_+_35599219_35599269	0.0259695	Sox2	ENSMUST00000115734.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr16_+_11405648_11405713	0.0257742	Sox2	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr18_+_34777008_34777075	0.025701	Sox2	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr10_+_23960494_23960494	0.0256031	Sox2	ENSMUST00000092660.1|Taar4|ENSMUSG00000069707.1|trace amine-associated receptor 4
mm10_v2_chr17_-_55712571_55712630	0.025485	Sox2	ENSMUST00000086876.5|Pot1b|ENSMUSG00000024174.8|protection of telomeres 1B
mm10_v2_chr9_+_70542872_70542920	0.0254481	Sox2	ENSMUST00000049263.7|Sltm|ENSMUSG00000032212.9|SAFB-like, transcription modulator
mm10_v2_chr10_+_82859198_82859217	0.0254071	Sox2	ENSMUST00000020484.6|Txnrd1|ENSMUSG00000020250.9|thioredoxin reductase 1
mm10_v2_chr17_-_43667015_43667163	0.0241122	Sox2	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr16_-_50432340_50432409	0.0240121	Sox2	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr5_-_65697856_65697963	0.0237645	Sox2	ENSMUST00000031104.6|Pds5a|ENSMUSG00000029202.9|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
mm10_v2_chr10_+_40349265_40349387	0.0237392	Sox2	ENSMUST00000044672.4|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19 	ENSMUST00000095743.2|Cdk19|ENSMUSG00000038481.6|cyclin-dependent kinase 19
mm10_v2_chr7_-_118705708_118705786	0.0232214	Sox2	ENSMUST00000038791.8|Gde1|ENSMUSG00000033917.8|glycerophosphodiester phosphodiesterase 1
mm10_v2_chr2_+_156721069_156721084	0.0231297	Sox2	ENSMUST00000000094.7|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr11_+_97415527_97415538	0.0230999	Sox2	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chrX_+_112600526_112600526	0.0226958	Sox2	ENSMUST00000113409.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr7_+_64501949_64502048	0.0221245	Sox2	ENSMUST00000138829.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr10_-_82764088_82764144	0.0218564	Sox2	ENSMUST00000130911.1|Nfyb|ENSMUSG00000020248.12|nuclear transcription factor-Y beta
mm10_v2_chr9_-_51963533_51963563	0.0211621	Sox2	ENSMUST00000034552.6|Fdx1|ENSMUSG00000032051.8|ferredoxin 1
mm10_v2_chr1_+_171331414_171331426	0.0210066	Sox2	ENSMUST00000097467.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr9_-_24774276_24774303	0.0208799	Sox2	ENSMUST00000052946.4|Tbx20|ENSMUSG00000031965.8|T-box 20 	ENSMUST00000166018.2|Tbx20|ENSMUSG00000031965.8|T-box 20
mm10_v2_chr3_+_40745430_40745459	0.0208681	Sox2	ENSMUST00000077083.6|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chr9_-_110989611_110989728	0.0205157	Sox2	ENSMUST00000084922.5|Rtp3|ENSMUSG00000066319.5|receptor transporter protein 3
mm10_v2_chr2_+_180598219_180598226	0.0203063	Sox2	ENSMUST00000103059.1|Col9a3|ENSMUSG00000027570.9|collagen, type IX, alpha 3
mm10_v2_chr2_-_7395879_7395912	0.0201558	Sox2	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr14_+_54936456_54936478	0.0196681	Sox2	ENSMUST00000037814.6|Cmtm5|ENSMUSG00000040759.8|CKLF-like MARVEL transmembrane domain containing 5
mm10_v2_chr2_-_6884975_6884996	0.0194372	Sox2	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr17_+_74338943_74338987	0.0192911	Sox2	ENSMUST00000024869.6|Spast|ENSMUSG00000024068.6|spastin
mm10_v2_chr2_+_74727074_74727201	0.019108	Sox2	ENSMUST00000111980.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr2_-_24919572_24919616	0.0189672	Sox2	ENSMUST00000046227.5|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000114432.2|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000091348.4|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000150379.1|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000152161.1|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000102938.3|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1
mm10_v2_chr1_+_180945898_180945962	0.0188609	Sox2	ENSMUST00000160508.1|Tmem63a|ENSMUSG00000026519.10|transmembrane protein 63a 	ENSMUST00000160536.1|Tmem63a|ENSMUSG00000026519.10|transmembrane protein 63a
mm10_v2_chr2_+_156721340_156721492	0.01875	Sox2	ENSMUST00000099145.5|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr10_+_90576570_90576668	0.0181753	Sox2	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr5_+_147957310_147957357	0.0180154	Sox2	ENSMUST00000085558.4|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2 	ENSMUST00000129092.1|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr18_-_6516089_6516108	0.0177798	Sox2	ENSMUST00000115870.2|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr12_+_32820304_32820362	0.0175583	Sox2	ENSMUST00000020886.7|Nampt|ENSMUSG00000020572.7|nicotinamide phosphoribosyltransferase
mm10_v2_chr5_+_138116903_138117041	0.0173672	Sox2	ENSMUST00000062350.8|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110961.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000080732.3|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110960.2|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000142185.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000136425.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21 	ENSMUST00000110959.1|Zscan21|ENSMUSG00000037017.9|zinc finger and SCAN domain containing 21
mm10_v2_chr10_+_94575257_94575295	0.0169221	Sox2	ENSMUST00000121471.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr11_+_105181793_105181982	0.0166671	Sox2	ENSMUST00000092537.3|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis) 	ENSMUST00000015107.6|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis) 	ENSMUST00000145048.1|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr9_-_59486323_59486415	0.0165899	Sox2	ENSMUST00000165322.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr12_-_14152038_14152069	0.0165055	Sox2	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr10_+_90576872_90576992	0.0161615	Sox2	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr16_-_34514084_34514128	0.0154066	Sox2	ENSMUST00000089655.5|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr19_+_7417586_7417650	0.0153134	Sox2	ENSMUST00000159348.1|2700081O15Rik|ENSMUSG00000053080.9|RIKEN cDNA 2700081O15 gene
mm10_v2_chr5_+_74535449_74535524	0.0146199	Sox2	ENSMUST00000080164.5|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113536.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000122245.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000120618.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113535.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113534.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr17_-_35121990_35122053	0.0143922	Sox2	ENSMUST00000173915.1|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide 	ENSMUST00000172765.2|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr1_-_191164815_191164818	0.0142683	Sox2	ENSMUST00000171798.1|Fam71a|ENSMUSG00000091017.1|family with sequence similarity 71, member A
mm10_v2_chr17_-_35704574_35704632	0.0138892	Sox2	ENSMUST00000117301.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1 	ENSMUST00000134995.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr11_-_76763550_76763582	0.013876	Sox2	ENSMUST00000010536.8|Gosr1|ENSMUSG00000010392.8|golgi SNAP receptor complex member 1
mm10_v2_chr16_+_13986596_13986674	0.013705	Sox2	ENSMUST00000056521.5|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene 	ENSMUST00000118412.1|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene 	ENSMUST00000131608.1|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene
mm10_v2_chr10_+_57486354_57486414	0.0136435	Sox2	ENSMUST00000079833.4|Hsf2|ENSMUSG00000019878.7|heat shock factor 2
mm10_v2_chr5_-_147076482_147076586	0.0136263	Sox2	ENSMUST00000016664.7|Lnx2|ENSMUSG00000016520.7|ligand of numb-protein X 2
mm10_v2_chr11_-_95309557_95309602	0.0135285	Sox2	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr16_+_43508118_43508263	0.0132706	Sox2	ENSMUST00000114690.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr16_-_97851796_97851853	0.0127296	Sox2	ENSMUST00000121584.1|Prdm15|ENSMUSG00000014039.11|PR domain containing 15
mm10_v2_chrX_+_74270812_74270979	0.0123233	Sox2	ENSMUST00000008826.7|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10 	ENSMUST00000151702.1|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10 	ENSMUST00000074085.5|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10 	ENSMUST00000135690.1|Rpl10|ENSMUSG00000008682.7|ribosomal protein L10
mm10_v2_chr10_+_127063599_127063655	0.0122166	Sox2	ENSMUST00000120226.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4 	ENSMUST00000133115.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4
mm10_v2_chr14_+_70554056_70554056	0.0121869	Sox2	ENSMUST00000022691.7|Hr|ENSMUSG00000022096.8|hairless
mm10_v2_chr11_-_116024489_116024511	0.0119892	Sox2	ENSMUST00000016703.7|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr17_-_80207299_80207308	0.0119817	Sox2	ENSMUST00000063417.9|Srsf7|ENSMUSG00000024097.10|serine/arginine-rich splicing factor 7
mm10_v2_chr11_+_98203059_98203059	0.0108449	Sox2	ENSMUST00000107539.1|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12
mm10_v2_chr2_+_163694015_163694058	0.010799	Sox2	ENSMUST00000109400.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr3_+_7503423_7503503	0.010658	Sox2	ENSMUST00000051064.3|Zc2hc1a|ENSMUSG00000043542.7|zinc finger, C2HC-type containing 1A
mm10_v2_chr12_-_33092875_33092902	0.010368	Sox2	ENSMUST00000095774.2|Cdhr3|ENSMUSG00000035860.8|cadherin-related family member 3
mm10_v2_chr13_-_96435952_96435967	0.0103545	Sox2	ENSMUST00000181761.1|Ankdd1b|ENSMUSG00000047117.6|ankyrin repeat and death domain containing 1B
mm10_v2_chr13_+_56703504_56703668	0.00959609	Sox2	ENSMUST00000109874.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr1_-_14310198_14310218	0.00956109	Sox2	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr19_+_30030439_30030528	0.00899138	Sox2	ENSMUST00000025739.7|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chrX_+_59999436_59999495	0.00832108	Sox2	ENSMUST00000033477.4|F9|ENSMUSG00000031138.4|coagulation factor IX
mm10_v2_chr2_+_10047838_10047838	0.00791171	Sox2	ENSMUST00000181588.1|C630004M23Rik|ENSMUSG00000097273.1|RIKEN cDNA C630004M23 gene
mm10_v2_chr19_+_40831296_40831313	0.00782691	Sox2	ENSMUST00000119316.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr4_+_150281573_150281646	0.00774966	Sox2	ENSMUST00000105682.2|Rere|ENSMUSG00000039852.10|arginine glutamic acid dipeptide (RE) repeats
mm10_v2_chr3_+_98382438_98382520	0.00754271	Sox2	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr8_+_92357787_92357801	0.00722165	Sox2	ENSMUST00000034184.10|Irx5|ENSMUSG00000031737.10|Iroquois related homeobox 5 (Drosophila)
mm10_v2_chr14_-_55092277_55092324	0.0070513	Sox2	ENSMUST00000036328.8|Zfhx2|ENSMUSG00000040721.8|zinc finger homeobox 2
mm10_v2_chr5_-_114380505_114380520	0.00643597	Sox2	ENSMUST00000102581.4|Kctd10|ENSMUSG00000001098.9|potassium channel tetramerisation domain containing 10
mm10_v2_chr15_-_39943689_39943788	0.00635191	Sox2	ENSMUST00000022916.5|Lrp12|ENSMUSG00000022305.6|low density lipoprotein-related protein 12
mm10_v2_chr10_-_4387436_4387479	0.00559396	Sox2	ENSMUST00000100077.3|Zbtb2|ENSMUSG00000075327.3|zinc finger and BTB domain containing 2
mm10_v2_chr2_-_168767136_168767201	0.00550458	Sox2	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chrX_+_73757069_73757111	0.00525377	Sox2	ENSMUST00000002079.6|Plxnb3|ENSMUSG00000031385.8|plexin B3
mm10_v2_chr4_-_44167905_44167976	0.00495032	Sox2	ENSMUST00000102934.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr1_+_10993452_10993478	0.00482599	Sox2	ENSMUST00000027056.5|Prex2|ENSMUSG00000048960.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm10_v2_chr11_-_23633621_23633639	0.00480196	Sox2	ENSMUST00000180260.1|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene 	ENSMUST00000141353.1|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene 	ENSMUST00000131612.1|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene 	ENSMUST00000109532.2|0610010F05Rik|ENSMUSG00000042208.9|RIKEN cDNA 0610010F05 gene
mm10_v2_chr2_-_7396192_7396241	0.00477758	Sox2	ENSMUST00000137733.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr17_+_47505149_47505164	0.00457155	Sox2	ENSMUST00000183177.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3 	ENSMUST00000182848.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr17_-_79355082_79355103	0.00427708	Sox2	ENSMUST00000068958.7|Cdc42ep3|ENSMUSG00000036533.8|CDC42 effector protein (Rho GTPase binding) 3
mm10_v2_chr10_-_95501921_95501953	0.00399685	Sox2	ENSMUST00000075829.2|Mrpl42|ENSMUSG00000062981.4|mitochondrial ribosomal protein L42
mm10_v2_chr3_-_127837419_127837505	0.00336403	Sox2	ENSMUST00000051737.6|Ap1ar|ENSMUSG00000074238.2|adaptor-related protein complex 1 associated regulatory protein
mm10_v2_chr3_-_95995662_95995692	0.00334989	Sox2	ENSMUST00000123006.1|Plekho1|ENSMUSG00000015745.3|pleckstrin homology domain containing, family O member 1
mm10_v2_chr11_+_106216926_106216968	0.00247731	Sox2	ENSMUST00000021046.5|Ddx42|ENSMUSG00000020705.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm10_v2_chr2_+_153241502_153241603	0.002	Sox2	ENSMUST00000049863.5|Pofut1|ENSMUSG00000046020.7|protein O-fucosyltransferase 1 	ENSMUST00000099192.3|Pofut1|ENSMUSG00000046020.7|protein O-fucosyltransferase 1 	ENSMUST00000109794.1|Pofut1|ENSMUSG00000046020.7|protein O-fucosyltransferase 1
mm10_v2_chr19_-_8218832_8218899	0.00196852	Sox2	ENSMUST00000113298.2|Slc22a29|ENSMUSG00000075044.5|solute carrier family 22. member 29
mm10_v2_chr11_-_28584260_28584324	0.00172701	Sox2	ENSMUST00000093253.3|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000109502.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000042534.8|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr6_+_51432678_51432784	0.00159363	Sox2	ENSMUST00000160133.1|Nfe2l3|ENSMUSG00000029832.10|nuclear factor, erythroid derived 2, like 3
mm10_v2_chr11_-_118355496_118355506	0.00139839	Sox2	ENSMUST00000017610.3|Timp2|ENSMUSG00000017466.3|tissue inhibitor of metalloproteinase 2
mm10_v2_chr10_-_57532416_57532487	0.00118024	Sox2	ENSMUST00000169122.1|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr15_+_75596645_75596662	0.0010709	Sox2	ENSMUST00000023243.4|Gpihbp1|ENSMUSG00000022579.4|GPI-anchored HDL-binding protein 1
mm10_v2_chr12_-_69357120_69357181	0.000709538	Sox2	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr11_+_3289168_3289281	0.000540726	Sox2	ENSMUST00000134089.1|Patz1|ENSMUSG00000020453.11|POZ (BTB) and AT hook containing zinc finger 1
mm10_v2_chr3_+_109573907_109573990	0.000490216	Sox2	ENSMUST00000106576.2|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr3_+_16183177_16183206	0.000445351	Sox2	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr16_+_43503607_43503642	0.000384898	Sox2	ENSMUST00000126100.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000123047.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000156981.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr14_-_34310503_34310560	0.000360253	Sox2	ENSMUST00000111917.1|Fam35a|ENSMUSG00000041471.8|family with sequence similarity 35, member A
