mm10_v2_chr5_-_136244865_136244908	2.09157	Sox6_Sox9	ENSMUST00000005188.9|Sh2b2|ENSMUSG00000005057.9|SH2B adaptor protein 2
mm10_v2_chr8_+_123411424_123411562	1.93193	Sox6_Sox9	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr16_+_17146937_17146985	1.70188	Sox6_Sox9	ENSMUST00000115706.1|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial) 	ENSMUST00000069064.4|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial)
mm10_v2_chr14_+_66344369_66344380	1.47862	Sox6_Sox9	ENSMUST00000118426.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000121955.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000120229.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000134440.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4
mm10_v2_chr4_+_48585276_48585365	1.47695	Sox6_Sox9	ENSMUST00000123476.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr2_+_150909565_150909642	1.45995	Sox6_Sox9	ENSMUST00000028948.4|Gins1|ENSMUSG00000027454.4|GINS complex subunit 1 (Psf1 homolog)
mm10_v2_chr18_-_43059418_43059471	1.39288	Sox6_Sox9	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr4_+_48585135_48585187	1.30939	Sox6_Sox9	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr6_+_34598530_34598587	1.26835	Sox6_Sox9	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr6_+_34598500_34598529	1.21843	Sox6_Sox9	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr16_+_17070220_17070239	1.21619	Sox6_Sox9	ENSMUST00000141959.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr16_+_17070281_17070320	1.2072	Sox6_Sox9	ENSMUST00000090199.3|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr2_+_25180737_25180764	1.1991	Sox6_Sox9	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr4_+_122995944_122995958	1.10529	Sox6_Sox9	ENSMUST00000106252.2|Mycl|ENSMUSG00000028654.7|v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)
mm10_v2_chr18_+_11633276_11633357	1.08878	Sox6_Sox9	ENSMUST00000115861.2|Rbbp8|ENSMUSG00000041238.9|retinoblastoma binding protein 8
mm10_v2_chr4_+_122996035_122996099	1.06291	Sox6_Sox9	ENSMUST00000030407.7|Mycl|ENSMUSG00000028654.7|v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)
mm10_v2_chr16_+_17070127_17070215	1.06011	Sox6_Sox9	ENSMUST00000115729.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr14_+_66344296_66344316	1.035	Sox6_Sox9	ENSMUST00000152093.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000074523.6|Stmn4|ENSMUSG00000022044.8|stathmin-like 4
mm10_v2_chrX_-_104201126_104201185	1.02881	Sox6_Sox9	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr17_-_35838208_35838243	1.02335	Sox6_Sox9	ENSMUST00000134978.2|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chrX_+_73639414_73639436	0.987778	Sox6_Sox9	ENSMUST00000019701.8|Dusp9|ENSMUSG00000031383.8|dual specificity phosphatase 9
mm10_v2_chr6_-_99726392_99726414	0.976701	Sox6_Sox9	ENSMUST00000032152.8|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000101120.4|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000008273.6|Prok2|ENSMUSG00000030069.9|prokineticin 2
mm10_v2_chr1_+_158362261_158362304	0.955698	Sox6_Sox9	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr11_+_44617310_44617336	0.942743	Sox6_Sox9	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr4_-_148130678_148130706	0.894802	Sox6_Sox9	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr8_-_84773381_84773427	0.88719	Sox6_Sox9	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr2_+_31245801_31245900	0.882841	Sox6_Sox9	ENSMUST00000000199.7|Ncs1|ENSMUSG00000062661.6|neuronal calcium sensor 1
mm10_v2_chr12_+_24708984_24709029	0.863885	Sox6_Sox9	ENSMUST00000154588.1|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr17_-_35838259_35838306	0.842863	Sox6_Sox9	ENSMUST00000001566.8|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr2_+_181763315_181763335	0.842778	Sox6_Sox9	ENSMUST00000081125.4|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr10_+_93831555_93831555	0.837183	Sox6_Sox9	ENSMUST00000095333.4|Usp44|ENSMUSG00000020020.7|ubiquitin specific peptidase 44
mm10_v2_chr16_+_4036942_4037103	0.825105	Sox6_Sox9	ENSMUST00000137748.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000006136.4|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000157044.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000120009.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I
mm10_v2_chr10_+_88091070_88091076	0.796453	Sox6_Sox9	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr17_-_70851189_70851216	0.78172	Sox6_Sox9	ENSMUST00000059775.8|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr1_-_12991109_12991177	0.746426	Sox6_Sox9	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr3_+_34649987_34650005	0.73876	Sox6_Sox9	ENSMUST00000099151.2|Sox2|ENSMUSG00000074637.4|SRY-box containing gene 2
mm10_v2_chr12_+_40446050_40446099	0.72792	Sox6_Sox9	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr3_-_116129615_116129688	0.722652	Sox6_Sox9	ENSMUST00000029574.8|Vcam1|ENSMUSG00000027962.10|vascular cell adhesion molecule 1
mm10_v2_chr4_-_91399984_91400007	0.714056	Sox6_Sox9	ENSMUST00000102799.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr13_-_97747399_97747414	0.713363	Sox6_Sox9	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr12_+_29528382_29528468	0.712015	Sox6_Sox9	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr5_+_30711564_30711586	0.711936	Sox6_Sox9	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr6_+_122513583_122513641	0.709623	Sox6_Sox9	ENSMUST00000032210.7|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5 	ENSMUST00000148517.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr7_+_100493795_100493848	0.701373	Sox6_Sox9	ENSMUST00000129324.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr5_+_30711849_30711905	0.697638	Sox6_Sox9	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr8_-_4259257_4259283	0.678566	Sox6_Sox9	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr2_+_3713478_3713500	0.662109	Sox6_Sox9	ENSMUST00000115053.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr2_+_32741452_32741499	0.66061	Sox6_Sox9	ENSMUST00000131101.1|Sh2d3c|ENSMUSG00000059013.6|SH2 domain containing 3C
mm10_v2_chr6_-_12749193_12749253	0.649538	Sox6_Sox9	ENSMUST00000046121.6|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A 	ENSMUST00000172356.1|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A
mm10_v2_chrX_+_157702574_157702598	0.645243	Sox6_Sox9	ENSMUST00000112520.1|Smpx|ENSMUSG00000041476.6|small muscle protein, X-linked
mm10_v2_chrX_-_18461371_18461402	0.643006	Sox6_Sox9	ENSMUST00000044188.4|4930578C19Rik|ENSMUSG00000037358.6|RIKEN cDNA 4930578C19 gene
mm10_v2_chr12_+_24708241_24708292	0.626029	Sox6_Sox9	ENSMUST00000020980.5|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr17_+_55445550_55445701	0.625205	Sox6_Sox9	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr11_-_90687572_90687607	0.622878	Sox6_Sox9	ENSMUST00000107869.2|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000154599.1|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000107868.1|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000020849.2|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken)
mm10_v2_chr12_+_31265234_31265267	0.620979	Sox6_Sox9	ENSMUST00000169088.1|Lamb1|ENSMUSG00000002900.9|laminin B1
mm10_v2_chr1_+_158362330_158362411	0.618848	Sox6_Sox9	ENSMUST00000170718.1|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr9_-_78480736_78480841	0.58515	Sox6_Sox9	ENSMUST00000156988.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr3_-_10208569_10208586	0.581895	Sox6_Sox9	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr4_-_105109829_105109913	0.576402	Sox6_Sox9	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chr12_+_119945957_119946133	0.573392	Sox6_Sox9	ENSMUST00000058644.8|Tmem196|ENSMUSG00000048004.8|transmembrane protein 196
mm10_v2_chr1_-_72874877_72874891	0.572706	Sox6_Sox9	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr8_-_84937347_84937367	0.561605	Sox6_Sox9	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr1_+_66386968_66386999	0.558448	Sox6_Sox9	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chrX_-_23285532_23285578	0.541258	Sox6_Sox9	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr6_+_134035691_134035717	0.536334	Sox6_Sox9	ENSMUST00000081028.6|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene) 	ENSMUST00000111963.1|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene)
mm10_v2_chr10_+_110745433_110745572	0.52353	Sox6_Sox9	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr11_+_76217608_76217636	0.522711	Sox6_Sox9	ENSMUST00000040806.4|Dbil5|ENSMUSG00000038057.4|diazepam binding inhibitor-like 5
mm10_v2_chr17_+_12119274_12119348	0.520523	Sox6_Sox9	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr9_-_88522876_88522929	0.514208	Sox6_Sox9	ENSMUST00000180563.2|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000183030.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000182232.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5
mm10_v2_chr4_+_129513581_129513644	0.512964	Sox6_Sox9	ENSMUST00000062356.6|Marcksl1|ENSMUSG00000047945.6|MARCKS-like 1
mm10_v2_chr4_-_88880201_88880228	0.512802	Sox6_Sox9	ENSMUST00000056014.2|Ifne|ENSMUSG00000045364.2|interferon epsilon
mm10_v2_chr2_-_11502025_11502049	0.504027	Sox6_Sox9	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr5_+_3343893_3343945	0.496808	Sox6_Sox9	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr11_+_3330781_3330812	0.496198	Sox6_Sox9	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr7_-_103813913_103813996	0.495816	Sox6_Sox9	ENSMUST00000098192.3|Hbb-bt|ENSMUSG00000073940.3|hemoglobin, beta adult t chain
mm10_v2_chr7_-_49636847_49636851	0.492708	Sox6_Sox9	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr13_-_106847267_106847267	0.492662	Sox6_Sox9	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr11_+_94044194_94044238	0.488033	Sox6_Sox9	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr11_+_94044241_94044273	0.48127	Sox6_Sox9	ENSMUST00000103168.3|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr12_+_31265279_31265322	0.479469	Sox6_Sox9	ENSMUST00000002979.8|Lamb1|ENSMUSG00000002900.9|laminin B1 	ENSMUST00000170495.1|Lamb1|ENSMUSG00000002900.9|laminin B1
mm10_v2_chr4_+_11579647_11579674	0.477273	Sox6_Sox9	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr2_+_102658640_102658669	0.472721	Sox6_Sox9	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr7_+_24507006_24507024	0.464541	Sox6_Sox9	ENSMUST00000176880.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr13_-_97747373_97747384	0.459894	Sox6_Sox9	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr10_-_29144194_29144194	0.456054	Sox6_Sox9	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr4_+_48585193_48585215	0.45425	Sox6_Sox9	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr18_+_4921662_4921726	0.449494	Sox6_Sox9	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr1_+_34005872_34005908	0.445459	Sox6_Sox9	ENSMUST00000182296.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr11_-_77489666_77489687	0.438659	Sox6_Sox9	ENSMUST00000037593.7|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b 	ENSMUST00000092892.3|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b
mm10_v2_chr17_-_35000848_35000958	0.438219	Sox6_Sox9	ENSMUST00000166828.3|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr10_+_69534039_69534070	0.425137	Sox6_Sox9	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr5_-_142550965_142551110	0.4227	Sox6_Sox9	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr12_-_34528844_34528904	0.413708	Sox6_Sox9	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr11_-_106579111_106579141	0.412714	Sox6_Sox9	ENSMUST00000103070.2|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr7_-_132813095_132813162	0.412164	Sox6_Sox9	ENSMUST00000106165.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr9_-_72111172_72111225	0.41087	Sox6_Sox9	ENSMUST00000183992.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr1_+_40515362_40515431	0.408638	Sox6_Sox9	ENSMUST00000027237.5|Il18rap|ENSMUSG00000026068.5|interleukin 18 receptor accessory protein
mm10_v2_chr7_+_100494044_100494088	0.402971	Sox6_Sox9	ENSMUST00000153287.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr6_-_136781718_136781806	0.4009	Sox6_Sox9	ENSMUST00000078095.6|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c 	ENSMUST00000032338.7|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c
mm10_v2_chr11_-_120598346_120598405	0.399264	Sox6_Sox9	ENSMUST00000026125.2|Alyref|ENSMUSG00000025134.2|Aly/REF export factor
mm10_v2_chr10_+_80151154_80151375	0.396477	Sox6_Sox9	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr19_-_46327121_46327156	0.389697	Sox6_Sox9	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr6_+_122513676_122513688	0.38796	Sox6_Sox9	ENSMUST00000142896.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5 	ENSMUST00000121656.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chrX_+_93654863_93654981	0.387951	Sox6_Sox9	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr5_+_26904682_26904710	0.387558	Sox6_Sox9	ENSMUST00000120555.1|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr17_+_31386244_31386280	0.380034	Sox6_Sox9	ENSMUST00000134525.1|Pde9a|ENSMUSG00000041119.5|phosphodiesterase 9A 	ENSMUST00000127929.1|Pde9a|ENSMUSG00000041119.5|phosphodiesterase 9A
mm10_v2_chr5_-_123182704_123182731	0.376019	Sox6_Sox9	ENSMUST00000154713.1|Hpd|ENSMUSG00000029445.7|4-hydroxyphenylpyruvic acid dioxygenase 	ENSMUST00000031398.7|Hpd|ENSMUSG00000029445.7|4-hydroxyphenylpyruvic acid dioxygenase
mm10_v2_chr2_+_68117713_68117713	0.374854	Sox6_Sox9	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr11_+_87581041_87581067	0.374435	Sox6_Sox9	ENSMUST00000018544.5|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000063156.4|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000107960.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr15_-_12592556_12592556	0.371866	Sox6_Sox9	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr5_+_3344194_3344312	0.36928	Sox6_Sox9	ENSMUST00000042410.4|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr8_+_11312805_11312887	0.367024	Sox6_Sox9	ENSMUST00000033899.7|Col4a2|ENSMUSG00000031503.7|collagen, type IV, alpha 2
mm10_v2_chr5_+_128736168_128736246	0.365806	Sox6_Sox9	ENSMUST00000086056.3|Piwil1|ENSMUSG00000029423.6|piwi-like RNA-mediated gene silencing 1
mm10_v2_chr12_+_84996309_84996419	0.357009	Sox6_Sox9	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr7_-_81934316_81934473	0.356969	Sox6_Sox9	ENSMUST00000026094.5|Hdgfrp3|ENSMUSG00000025104.7|hepatoma-derived growth factor, related protein 3 	ENSMUST00000107305.1|Hdgfrp3|ENSMUSG00000025104.7|hepatoma-derived growth factor, related protein 3
mm10_v2_chr9_+_122923050_122923099	0.355913	Sox6_Sox9	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr12_+_108605757_108605814	0.353213	Sox6_Sox9	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr7_+_16309577_16309641	0.350665	Sox6_Sox9	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr4_-_132345715_132345747	0.347897	Sox6_Sox9	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr10_-_117063764_117063814	0.345321	Sox6_Sox9	ENSMUST00000047672.7|Cct2|ENSMUSG00000034024.7|chaperonin containing Tcp1, subunit 2 (beta)
mm10_v2_chr11_-_3863895_3863910	0.339943	Sox6_Sox9	ENSMUST00000070552.7|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr4_+_108460000_108460030	0.33956	Sox6_Sox9	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr7_+_25681158_25681158	0.334023	Sox6_Sox9	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr15_+_6386598_6386785	0.333906	Sox6_Sox9	ENSMUST00000080880.5|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110664.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110663.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161812.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000160134.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr2_-_160367057_160367073	0.333525	Sox6_Sox9	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr9_-_79718518_79718592	0.333358	Sox6_Sox9	ENSMUST00000071750.6|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr13_+_75967704_75967753	0.329937	Sox6_Sox9	ENSMUST00000022081.1|Spata9|ENSMUSG00000021590.6|spermatogenesis associated 9
mm10_v2_chr8_+_46490968_46490995	0.329812	Sox6_Sox9	ENSMUST00000110372.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1 	ENSMUST00000130563.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chrX_-_167855061_167855081	0.325126	Sox6_Sox9	ENSMUST00000112146.1|Frmpd4|ENSMUSG00000049176.8|FERM and PDZ domain containing 4
mm10_v2_chr13_+_55399648_55399700	0.323688	Sox6_Sox9	ENSMUST00000057167.7|Slc34a1|ENSMUSG00000021490.10|solute carrier family 34 (sodium phosphate), member 1
mm10_v2_chr9_-_29411736_29411773	0.322604	Sox6_Sox9	ENSMUST00000115236.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr1_-_97761538_97761609	0.319933	Sox6_Sox9	ENSMUST00000171129.1|Ppip5k2|ENSMUSG00000040648.8|diphosphoinositol pentakisphosphate kinase 2
mm10_v2_chr6_+_122513643_122513668	0.319027	Sox6_Sox9	ENSMUST00000118626.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr7_+_16310412_16310455	0.317795	Sox6_Sox9	ENSMUST00000136781.1|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr12_+_51348265_51348368	0.313903	Sox6_Sox9	ENSMUST00000119211.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr11_+_94967622_94967661	0.309978	Sox6_Sox9	ENSMUST00000038928.5|Hils1|ENSMUSG00000038994.5|histone H1-like protein in spermatids 1
mm10_v2_chr7_+_127800604_127800696	0.308165	Sox6_Sox9	ENSMUST00000046863.5|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000106272.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000139068.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr6_-_47594967_47595047	0.307293	Sox6_Sox9	ENSMUST00000081721.6|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114618.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114616.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila)
mm10_v2_chr1_-_33814516_33814576	0.304868	Sox6_Sox9	ENSMUST00000044455.5|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451 	ENSMUST00000115167.1|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451
mm10_v2_chr8_-_11312731_11312826	0.304564	Sox6_Sox9	ENSMUST00000033898.9|Col4a1|ENSMUSG00000031502.9|collagen, type IV, alpha 1
mm10_v2_chr2_+_68104671_68104671	0.303719	Sox6_Sox9	ENSMUST00000042456.3|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr6_-_3494587_3494598	0.30361	Sox6_Sox9	ENSMUST00000049985.8|Hepacam2|ENSMUSG00000044156.8|HEPACAM family member 2
mm10_v2_chr2_-_65567465_65567495	0.302405	Sox6_Sox9	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr4_-_116405986_116406120	0.301752	Sox6_Sox9	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr1_+_6730135_6730176	0.301165	Sox6_Sox9	ENSMUST00000155921.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr9_-_32541589_32541602	0.300724	Sox6_Sox9	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr9_-_79718631_79718678	0.298259	Sox6_Sox9	ENSMUST00000180083.1|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr15_-_85821733_85821801	0.296992	Sox6_Sox9	ENSMUST00000064370.4|Pkdrej|ENSMUSG00000052496.4|polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)
mm10_v2_chr11_+_94044111_94044121	0.293999	Sox6_Sox9	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr6_+_83137089_83137121	0.288531	Sox6_Sox9	ENSMUST00000121093.1|Rtkn|ENSMUSG00000034930.9|rhotekin 	ENSMUST00000087938.4|Rtkn|ENSMUSG00000034930.9|rhotekin
mm10_v2_chr8_+_45628176_45628219	0.288058	Sox6_Sox9	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr11_-_11890368_11890379	0.287999	Sox6_Sox9	ENSMUST00000155690.1|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chr7_+_119900099_119900108	0.277655	Sox6_Sox9	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr4_+_127021311_127021339	0.277142	Sox6_Sox9	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr4_+_140701466_140701509	0.273627	Sox6_Sox9	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr9_+_13765970_13766043	0.270969	Sox6_Sox9	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr2_+_3114220_3114225	0.270106	Sox6_Sox9	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr10_-_37138863_37138937	0.267114	Sox6_Sox9	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr13_+_93304066_93304138	0.263345	Sox6_Sox9	ENSMUST00000109493.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr12_+_51348370_51348406	0.261965	Sox6_Sox9	ENSMUST00000121521.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr6_-_122340200_122340244	0.26116	Sox6_Sox9	ENSMUST00000159384.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr2_-_152398046_152398076	0.259865	Sox6_Sox9	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr4_-_135873801_135873853	0.25855	Sox6_Sox9	ENSMUST00000030436.5|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr11_-_78497734_78497793	0.257785	Sox6_Sox9	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr11_-_11890394_11890408	0.252544	Sox6_Sox9	ENSMUST00000109659.2|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chr5_+_3928033_3928178	0.251019	Sox6_Sox9	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr1_+_153665274_153665325	0.250951	Sox6_Sox9	ENSMUST00000152114.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111812.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr13_-_56252163_56252181	0.250038	Sox6_Sox9	ENSMUST00000058475.4|Neurog1|ENSMUSG00000048904.4|neurogenin 1
mm10_v2_chr13_+_93304940_93305278	0.248326	Sox6_Sox9	ENSMUST00000109497.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109498.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000060490.4|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109492.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109496.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109495.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chrX_+_56779699_56779819	0.247289	Sox6_Sox9	ENSMUST00000114772.2|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000114768.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000155882.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr3_-_96058446_96058466	0.246777	Sox6_Sox9	ENSMUST00000015891.5|Vps45|ENSMUSG00000015747.5|vacuolar protein sorting 45 (yeast)
mm10_v2_chr14_-_56262233_56262260	0.24572	Sox6_Sox9	ENSMUST00000015581.4|Gzmb|ENSMUSG00000015437.4|granzyme B
mm10_v2_chr7_+_96210107_96210183	0.245395	Sox6_Sox9	ENSMUST00000138760.1|Tenm4|ENSMUSG00000048078.10|teneurin transmembrane protein 4
mm10_v2_chr11_-_11970540_11970642	0.244621	Sox6_Sox9	ENSMUST00000109653.1|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr8_-_85555261_85555315	0.24232	Sox6_Sox9	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chr7_+_45216671_45216695	0.241786	Sox6_Sox9	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr15_-_91049823_91049948	0.241629	Sox6_Sox9	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr4_-_135873546_135873606	0.239476	Sox6_Sox9	ENSMUST00000142585.1|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr1_+_135729147_135729234	0.23861	Sox6_Sox9	ENSMUST00000027677.7|Csrp1|ENSMUSG00000026421.8|cysteine and glycine-rich protein 1
mm10_v2_chr10_-_62792243_62792368	0.238489	Sox6_Sox9	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr7_-_132813528_132813667	0.238296	Sox6_Sox9	ENSMUST00000097999.2|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr3_+_19957037_19957073	0.23661	Sox6_Sox9	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr2_-_157079212_157079276	0.236314	Sox6_Sox9	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr3_+_101377074_101377158	0.236301	Sox6_Sox9	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr11_-_78497458_78497539	0.234312	Sox6_Sox9	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr5_+_142960343_142960363	0.234119	Sox6_Sox9	ENSMUST00000031565.8|Fscn1|ENSMUSG00000029581.8|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm10_v2_chr4_-_130175113_130175138	0.229012	Sox6_Sox9	ENSMUST00000105998.1|Tinagl1|ENSMUSG00000028776.8|tubulointerstitial nephritis antigen-like 1
mm10_v2_chrX_+_96456362_96456390	0.228932	Sox6_Sox9	ENSMUST00000079322.5|Heph|ENSMUSG00000031209.8|hephaestin 	ENSMUST00000113838.1|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr12_-_72236692_72236724	0.228482	Sox6_Sox9	ENSMUST00000021497.9|Rtn1|ENSMUSG00000021087.11|reticulon 1 	ENSMUST00000137990.1|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr15_-_10713537_10713544	0.22728	Sox6_Sox9	ENSMUST00000090339.3|Rai14|ENSMUSG00000022246.7|retinoic acid induced 14
mm10_v2_chr7_-_100514800_100514960	0.224516	Sox6_Sox9	ENSMUST00000054923.7|Dnajb13|ENSMUSG00000030708.7|DnaJ (Hsp40) related, subfamily B, member 13
mm10_v2_chr8_-_105289465_105289541	0.223717	Sox6_Sox9	ENSMUST00000171788.1|4931428F04Rik|ENSMUSG00000014837.8|RIKEN cDNA 4931428F04 gene 	ENSMUST00000014981.6|4931428F04Rik|ENSMUSG00000014837.8|RIKEN cDNA 4931428F04 gene
mm10_v2_chr1_-_163289214_163289235	0.222146	Sox6_Sox9	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr11_-_76217490_76217664	0.221783	Sox6_Sox9	ENSMUST00000102500.4|Gemin4|ENSMUSG00000049396.6|gem (nuclear organelle) associated protein 4
mm10_v2_chr12_+_29938036_29938059	0.220634	Sox6_Sox9	ENSMUST00000122328.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila) 	ENSMUST00000118321.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila)
mm10_v2_chr16_+_94370618_94370784	0.219963	Sox6_Sox9	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr14_+_47663756_47663756	0.218509	Sox6_Sox9	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr17_-_34615965_34615978	0.215067	Sox6_Sox9	ENSMUST00000097345.3|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8 	ENSMUST00000015611.7|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chrX_+_112600526_112600526	0.209151	Sox6_Sox9	ENSMUST00000113409.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr7_-_127615208_127615219	0.209082	Sox6_Sox9	ENSMUST00000122066.1|Zfp629|ENSMUSG00000045639.8|zinc finger protein 629
mm10_v2_chr10_+_42860543_42860627	0.207808	Sox6_Sox9	ENSMUST00000157071.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr10_-_121311034_121311189	0.206811	Sox6_Sox9	ENSMUST00000064107.5|Tbc1d30|ENSMUSG00000052302.5|TBC1 domain family, member 30
mm10_v2_chr9_+_27790947_27790991	0.206761	Sox6_Sox9	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr4_+_13743424_13743478	0.202895	Sox6_Sox9	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr2_+_37516618_37516634	0.202238	Sox6_Sox9	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
mm10_v2_chr14_+_12189943_12190001	0.202164	Sox6_Sox9	ENSMUST00000119888.1|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr4_-_99120898_99120935	0.201213	Sox6_Sox9	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chrX_+_71556874_71556946	0.197765	Sox6_Sox9	ENSMUST00000123100.1|Hmgb3|ENSMUSG00000015217.5|high mobility group box 3
mm10_v2_chrX_-_16911774_16911774	0.19587	Sox6_Sox9	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr17_-_34121944_34121988	0.193881	Sox6_Sox9	ENSMUST00000151986.1|Brd2|ENSMUSG00000024335.13|bromodomain containing 2
mm10_v2_chr16_+_94370786_94370823	0.192594	Sox6_Sox9	ENSMUST00000147046.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000149885.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000127667.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000119131.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000145883.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr2_+_104590453_104590533	0.192229	Sox6_Sox9	ENSMUST00000028599.7|Cstf3|ENSMUSG00000027176.8|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm10_v2_chr5_-_138155694_138155744	0.190952	Sox6_Sox9	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr10_-_116473875_116473929	0.190623	Sox6_Sox9	ENSMUST00000068233.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr4_+_148130883_148130915	0.190572	Sox6_Sox9	ENSMUST00000084129.2|Mad2l2|ENSMUSG00000029003.5|MAD2 mitotic arrest deficient-like 2
mm10_v2_chr4_+_42158092_42158092	0.183765	Sox6_Sox9	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr2_+_153031852_153032014	0.18352	Sox6_Sox9	ENSMUST00000037235.6|Xkr7|ENSMUSG00000042631.7|X Kell blood group precursor related family member 7 homolog
mm10_v2_chr19_+_47579602_47579681	0.182274	Sox6_Sox9	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chr11_+_94044331_94044365	0.181336	Sox6_Sox9	ENSMUST00000024979.8|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr10_-_116473418_116473514	0.180516	Sox6_Sox9	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr11_+_64979025_64979110	0.179883	Sox6_Sox9	ENSMUST00000071891.5|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli) 	ENSMUST00000108697.1|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli) 	ENSMUST00000101049.2|Elac2|ENSMUSG00000020549.8|elaC homolog 2 (E. coli)
mm10_v2_chr7_+_24507122_24507139	0.176897	Sox6_Sox9	ENSMUST00000177205.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr2_+_120476911_120476976	0.17652	Sox6_Sox9	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr10_-_58675631_58675654	0.176015	Sox6_Sox9	ENSMUST00000003312.4|Edar|ENSMUSG00000003227.4|ectodysplasin-A receptor
mm10_v2_chr2_-_65567505_65567627	0.175559	Sox6_Sox9	ENSMUST00000100069.2|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr7_+_99381495_99381555	0.175075	Sox6_Sox9	ENSMUST00000037528.8|Gdpd5|ENSMUSG00000035314.8|glycerophosphodiester phosphodiesterase domain containing 5
mm10_v2_chr3_-_96926020_96926067	0.17101	Sox6_Sox9	ENSMUST00000062944.5|Gja8|ENSMUSG00000049908.5|gap junction protein, alpha 8
mm10_v2_chr2_-_20968526_20968625	0.170831	Sox6_Sox9	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr15_-_95528702_95528777	0.169836	Sox6_Sox9	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chrX_+_166238901_166238914	0.169235	Sox6_Sox9	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr9_-_72111651_72111712	0.168863	Sox6_Sox9	ENSMUST00000185117.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_+_4882204_4882252	0.168112	Sox6_Sox9	ENSMUST00000115019.1|Sephs1|ENSMUSG00000026662.7|selenophosphate synthetase 1
mm10_v2_chr10_-_117376955_117376978	0.165254	Sox6_Sox9	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr1_-_119837613_119837673	0.15777	Sox6_Sox9	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr6_+_48593883_48593900	0.157569	Sox6_Sox9	ENSMUST00000154010.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000163452.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000118229.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000009420.8|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr5_+_109923400_109923400	0.157393	Sox6_Sox9	ENSMUST00000112544.1|Gm15446|ENSMUSG00000090015.2|predicted gene 15446
mm10_v2_chr12_+_84996487_84996496	0.155014	Sox6_Sox9	ENSMUST00000101202.3|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr10_-_24836165_24836195	0.154969	Sox6_Sox9	ENSMUST00000020169.7|Enpp3|ENSMUSG00000019989.7|ectonucleotide pyrophosphatase/phosphodiesterase 3
mm10_v2_chr5_-_120777628_120777664	0.154952	Sox6_Sox9	ENSMUST00000044833.8|Oas3|ENSMUSG00000032661.8|2'-5' oligoadenylate synthetase 3
mm10_v2_chr16_-_76373014_76373103	0.154231	Sox6_Sox9	ENSMUST00000054178.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr11_-_116843449_116843505	0.152987	Sox6_Sox9	ENSMUST00000047616.3|Jmjd6|ENSMUSG00000056962.5|jumonji domain containing 6
mm10_v2_chr1_+_133045984_133046082	0.151417	Sox6_Sox9	ENSMUST00000077730.5|Pik3c2b|ENSMUSG00000026447.10|phosphoinositide-3-kinase, class 2, beta polypeptide
mm10_v2_chr8_+_69822429_69822592	0.150361	Sox6_Sox9	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chr11_-_100613334_100613368	0.147017	Sox6_Sox9	ENSMUST00000146840.1|Dnajc7|ENSMUSG00000014195.9|DnaJ (Hsp40) homolog, subfamily C, member 7
mm10_v2_chr9_-_72111755_72111821	0.145361	Sox6_Sox9	ENSMUST00000183492.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184523.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000034755.6|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr5_-_8622855_8622952	0.144741	Sox6_Sox9	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr2_+_158666690_158666740	0.14229	Sox6_Sox9	ENSMUST00000103116.3|Ppp1r16b|ENSMUSG00000037754.7|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm10_v2_chr1_+_39900883_39900963	0.142264	Sox6_Sox9	ENSMUST00000163854.2|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4 	ENSMUST00000168431.1|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4
mm10_v2_chr6_-_24168083_24168097	0.142197	Sox6_Sox9	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chr5_+_65537209_65537233	0.141129	Sox6_Sox9	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr9_-_79759849_79759856	0.140698	Sox6_Sox9	ENSMUST00000034881.6|Cox7a2|ENSMUSG00000032330.6|cytochrome c oxidase subunit VIIa 2
mm10_v2_chrX_+_92489949_92489949	0.139939	Sox6_Sox9	ENSMUST00000096371.2|Gm5941|ENSMUSG00000071726.2|predicted gene 5941
mm10_v2_chr17_+_35000987_35001097	0.139066	Sox6_Sox9	ENSMUST00000087315.7|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase 	ENSMUST00000173584.1|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase
mm10_v2_chr5_+_65131184_65131231	0.138421	Sox6_Sox9	ENSMUST00000031089.5|Klhl5|ENSMUSG00000054920.6|kelch-like 5 	ENSMUST00000101191.3|Klhl5|ENSMUSG00000054920.6|kelch-like 5
mm10_v2_chr11_+_116843278_116843278	0.138158	Sox6_Sox9	ENSMUST00000106370.3|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr11_-_99438143_99438159	0.13704	Sox6_Sox9	ENSMUST00000017743.2|Krt20|ENSMUSG00000035775.2|keratin 20
mm10_v2_chr7_-_83884289_83884341	0.136691	Sox6_Sox9	ENSMUST00000094216.3|Mesdc1|ENSMUSG00000070462.3|mesoderm development candidate 1
mm10_v2_chr2_-_168207063_168207142	0.136417	Sox6_Sox9	ENSMUST00000088001.5|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr8_+_92357787_92357801	0.135639	Sox6_Sox9	ENSMUST00000034184.10|Irx5|ENSMUSG00000031737.10|Iroquois related homeobox 5 (Drosophila)
mm10_v2_chr17_-_34615776_34615793	0.134793	Sox6_Sox9	ENSMUST00000168353.2|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chrM_+_7759_7927	0.134467	Sox6_Sox9	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr13_+_20794119_20794179	0.132755	Sox6_Sox9	ENSMUST00000021757.3|Aoah|ENSMUSG00000021322.7|acyloxyacyl hydrolase
mm10_v2_chr13_+_93304799_93304935	0.130418	Sox6_Sox9	ENSMUST00000080127.5|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr12_-_80643799_80643857	0.129821	Sox6_Sox9	ENSMUST00000166931.1|Erh|ENSMUSG00000021131.7|enhancer of rudimentary homolog (Drosophila)
mm10_v2_chr4_-_133753611_133753666	0.127016	Sox6_Sox9	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr1_+_6730051_6730117	0.125635	Sox6_Sox9	ENSMUST00000043578.6|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131467.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000150761.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000151281.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr5_+_43515513_43515588	0.125142	Sox6_Sox9	ENSMUST00000167522.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000144558.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000076939.6|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7
mm10_v2_chr6_+_125552948_125552980	0.124982	Sox6_Sox9	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr2_-_30474199_30474222	0.123492	Sox6_Sox9	ENSMUST00000065134.2|Ier5l|ENSMUSG00000089762.2|immediate early response 5-like
mm10_v2_chr11_+_61653259_61653353	0.123075	Sox6_Sox9	ENSMUST00000004959.2|Grap|ENSMUSG00000004837.2|GRB2-related adaptor protein
mm10_v2_chr4_-_34882919_34882964	0.122946	Sox6_Sox9	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr3_+_90072641_90072657	0.122224	Sox6_Sox9	ENSMUST00000121503.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119570.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000062193.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr7_-_105787567_105787654	0.122143	Sox6_Sox9	ENSMUST00000144189.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr6_-_52165413_52165413	0.1194	Sox6_Sox9	ENSMUST00000014848.8|Hoxa2|ENSMUSG00000014704.8|homeobox A2
mm10_v2_chr7_-_127615226_127615272	0.117886	Sox6_Sox9	ENSMUST00000084564.3|Zfp629|ENSMUSG00000045639.8|zinc finger protein 629
mm10_v2_chr6_+_113307160_113307230	0.117237	Sox6_Sox9	ENSMUST00000113122.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113119.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113121.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113117.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1
mm10_v2_chr2_-_104816696_104816792	0.115678	Sox6_Sox9	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr19_+_53600377_53600435	0.115661	Sox6_Sox9	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chr10_+_67096456_67096534	0.11532	Sox6_Sox9	ENSMUST00000174317.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr9_+_74976096_74976177	0.114959	Sox6_Sox9	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr19_-_5729618_5729700	0.11376	Sox6_Sox9	ENSMUST00000116558.2|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000099955.3|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000161368.1|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B
mm10_v2_chr15_-_77153772_77153817	0.112248	Sox6_Sox9	ENSMUST00000166610.1|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENSMUST00000111581.2|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2
mm10_v2_chr2_-_168206875_168206922	0.108961	Sox6_Sox9	ENSMUST00000057793.4|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chrX_+_109095359_109095391	0.108087	Sox6_Sox9	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chr2_-_146511899_146511979	0.108047	Sox6_Sox9	ENSMUST00000131824.1|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr6_-_40544977_40544977	0.107002	Sox6_Sox9	ENSMUST00000089490.2|Olfr461|ENSMUSG00000068259.2|olfactory receptor 461
mm10_v2_chr7_+_80860909_80860972	0.10646	Sox6_Sox9	ENSMUST00000132163.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2 	ENSMUST00000147125.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2
mm10_v2_chr3_+_90476121_90476220	0.105995	Sox6_Sox9	ENSMUST00000001042.8|Ilf2|ENSMUSG00000001016.8|interleukin enhancer binding factor 2
mm10_v2_chr17_-_79355082_79355103	0.105723	Sox6_Sox9	ENSMUST00000068958.7|Cdc42ep3|ENSMUSG00000036533.8|CDC42 effector protein (Rho GTPase binding) 3
mm10_v2_chr9_-_60511003_60511035	0.105685	Sox6_Sox9	ENSMUST00000098660.3|Thsd4|ENSMUSG00000032289.9|thrombospondin, type I, domain containing 4
mm10_v2_chr8_-_46080284_46080284	0.104415	Sox6_Sox9	ENSMUST00000177186.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr5_+_65537267_65537331	0.104242	Sox6_Sox9	ENSMUST00000122141.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr4_+_57434247_57434368	0.104009	Sox6_Sox9	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr4_+_43493345_43493430	0.103823	Sox6_Sox9	ENSMUST00000030181.5|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107 	ENSMUST00000107922.2|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107
mm10_v2_chr9_+_69989466_69989539	0.102792	Sox6_Sox9	ENSMUST00000034754.5|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000085393.6|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2 	ENSMUST00000117450.1|Bnip2|ENSMUSG00000011958.11|BCL2/adenovirus E1B interacting protein 2
mm10_v2_chr3_+_19957088_19957114	0.102729	Sox6_Sox9	ENSMUST00000108328.1|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr7_+_128688480_128688500	0.101627	Sox6_Sox9	ENSMUST00000118605.1|Inpp5f|ENSMUSG00000042105.12|inositol polyphosphate-5-phosphatase F
mm10_v2_chr10_+_116301374_116301428	0.0981723	Sox6_Sox9	ENSMUST00000092167.5|Ptprb|ENSMUSG00000020154.9|protein tyrosine phosphatase, receptor type, B
mm10_v2_chr6_+_11925869_11925941	0.0964161	Sox6_Sox9	ENSMUST00000115510.1|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000115511.2|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000090632.4|Phf14|ENSMUSG00000029629.10|PHD finger protein 14
mm10_v2_chr14_-_47568427_47568436	0.096292	Sox6_Sox9	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr14_-_19823807_19823832	0.0946021	Sox6_Sox9	ENSMUST00000022341.5|2700060E02Rik|ENSMUSG00000021807.5|RIKEN cDNA 2700060E02 gene
mm10_v2_chr19_-_19001099_19001119	0.0943236	Sox6_Sox9	ENSMUST00000040153.8|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta 	ENSMUST00000112828.1|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta
mm10_v2_chr7_+_24507099_24507110	0.0941868	Sox6_Sox9	ENSMUST00000177228.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr7_-_28372233_28372371	0.0937167	Sox6_Sox9	ENSMUST00000094644.4|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chr10_+_37139558_37139558	0.091565	Sox6_Sox9	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr4_+_42655251_42655251	0.0900167	Sox6_Sox9	ENSMUST00000177785.1|Ccl27b|ENSMUSG00000096826.1|chemokine (C-C motif) ligand 27b
mm10_v2_chr2_+_74727074_74727201	0.0892302	Sox6_Sox9	ENSMUST00000111980.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr1_+_59482133_59482179	0.0873321	Sox6_Sox9	ENSMUST00000114246.2|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila) 	ENSMUST00000037105.6|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila)
mm10_v2_chr4_-_117682233_117682279	0.0868111	Sox6_Sox9	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr7_-_133122615_133122762	0.0850523	Sox6_Sox9	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr5_+_64230285_64230312	0.0849188	Sox6_Sox9	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr6_+_48593927_48593952	0.0828369	Sox6_Sox9	ENSMUST00000135151.1|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr6_-_124741374_124741402	0.0817651	Sox6_Sox9	ENSMUST00000004389.5|Grcc10|ENSMUSG00000072772.3|gene rich cluster, C10 gene
mm10_v2_chr10_+_42860348_42860377	0.0801861	Sox6_Sox9	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr17_-_24644933_24644976	0.0800431	Sox6_Sox9	ENSMUST00000019684.5|Slc9a3r2|ENSMUSG00000002504.8|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm10_v2_chr9_-_79718720_79718752	0.0794733	Sox6_Sox9	ENSMUST00000121227.1|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr15_+_99702278_99702312	0.0772959	Sox6_Sox9	ENSMUST00000023759.4|Smarcd1|ENSMUSG00000023018.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm10_v2_chr10_-_117376922_117376954	0.0768974	Sox6_Sox9	ENSMUST00000177145.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176670.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr19_-_7241216_7241226	0.0763168	Sox6_Sox9	ENSMUST00000025675.9|Naa40|ENSMUSG00000024764.9|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
mm10_v2_chr17_+_37193889_37193897	0.0761791	Sox6_Sox9	ENSMUST00000038844.6|Ubd|ENSMUSG00000035186.6|ubiquitin D
mm10_v2_chr19_+_55180799_55180885	0.0754955	Sox6_Sox9	ENSMUST00000025936.5|Tectb|ENSMUSG00000024979.7|tectorin beta
mm10_v2_chr1_+_153900572_153900606	0.0729359	Sox6_Sox9	ENSMUST00000139476.1|Glul|ENSMUSG00000026473.9|glutamate-ammonia ligase (glutamine synthetase)
mm10_v2_chr7_-_27195727_27195768	0.0716292	Sox6_Sox9	ENSMUST00000163311.2|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A 	ENSMUST00000126211.1|Snrpa|ENSMUSG00000061479.9|small nuclear ribonucleoprotein polypeptide A
mm10_v2_chr12_+_111039334_111039400	0.0713418	Sox6_Sox9	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr9_+_55541148_55541209	0.0709214	Sox6_Sox9	ENSMUST00000034869.4|Isl2|ENSMUSG00000032318.6|insulin related protein 2 (islet 2)
mm10_v2_chrX_-_135693783_135693795	0.0696171	Sox6_Sox9	ENSMUST00000078605.6|1700008I05Rik|ENSMUSG00000058252.6|RIKEN cDNA 1700008I05 gene
mm10_v2_chr3_-_95891938_95892005	0.0695334	Sox6_Sox9	ENSMUST00000036360.6|BC028528|ENSMUSG00000038543.7|cDNA sequence BC028528 	ENSMUST00000090476.3|BC028528|ENSMUSG00000038543.7|cDNA sequence BC028528
mm10_v2_chr6_-_6578594_6578672	0.0676335	Sox6_Sox9	ENSMUST00000041111.9|Shfm1|ENSMUSG00000042541.9|split hand/foot malformation (ectrodactyly) type 1
mm10_v2_chr13_-_104816908_104816953	0.0666275	Sox6_Sox9	ENSMUST00000022228.6|Cwc27|ENSMUSG00000021715.6|CWC27 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr1_-_139781236_139781239	0.0652582	Sox6_Sox9	ENSMUST00000027612.8|Gm4788|ENSMUSG00000070594.4|predicted gene 4788 	ENSMUST00000111989.2|Gm4788|ENSMUSG00000070594.4|predicted gene 4788 	ENSMUST00000111986.2|Gm4788|ENSMUSG00000070594.4|predicted gene 4788
mm10_v2_chr11_+_51261719_51261731	0.0626221	Sox6_Sox9	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr4_-_63403330_63403354	0.0617699	Sox6_Sox9	ENSMUST00000035724.4|Akna|ENSMUSG00000039158.11|AT-hook transcription factor
mm10_v2_chr15_+_59648644_59648687	0.0613536	Sox6_Sox9	ENSMUST00000118228.1|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr7_-_130266237_130266263	0.0601861	Sox6_Sox9	ENSMUST00000117872.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2 	ENSMUST00000120187.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2
mm10_v2_chrX_-_104413825_104413856	0.0591144	Sox6_Sox9	ENSMUST00000033695.5|Abcb7|ENSMUSG00000031333.7|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm10_v2_chr4_+_43406435_43406615	0.0563546	Sox6_Sox9	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr10_+_90829409_90829481	0.055293	Sox6_Sox9	ENSMUST00000182202.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182966.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr8_-_71395794_71395821	0.0544144	Sox6_Sox9	ENSMUST00000049184.7|Ushbp1|ENSMUSG00000034911.7|Usher syndrome 1C binding protein 1
mm10_v2_chr9_+_110532501_110532600	0.0541973	Sox6_Sox9	ENSMUST00000153838.2|Setd2|ENSMUSG00000044791.10|SET domain containing 2
mm10_v2_chr12_-_100159601_100159672	0.053543	Sox6_Sox9	ENSMUST00000021596.7|Nrde2|ENSMUSG00000021179.7|nrde-2 necessary for RNA interference, domain containing
mm10_v2_chr6_-_31563978_31563989	0.0529351	Sox6_Sox9	ENSMUST00000026698.7|Podxl|ENSMUSG00000025608.9|podocalyxin-like
mm10_v2_chr4_+_137993016_137993036	0.0526609	Sox6_Sox9	ENSMUST00000105830.2|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000084215.5|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000058133.3|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000139759.1|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3
mm10_v2_chr11_-_74590065_74590158	0.0515969	Sox6_Sox9	ENSMUST00000145524.1|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2 	ENSMUST00000047488.7|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2
mm10_v2_chr10_-_130394241_130394241	0.0512939	Sox6_Sox9	ENSMUST00000094502.4|Vmn2r84|ENSMUSG00000070601.4|vomeronasal 2, receptor 84
mm10_v2_chr14_+_47298260_47298342	0.0505683	Sox6_Sox9	ENSMUST00000166743.1|Mapk1ip1l|ENSMUSG00000021840.10|mitogen-activated protein kinase 1 interacting protein 1-like
mm10_v2_chr1_-_153487639_153487662	0.0497002	Sox6_Sox9	ENSMUST00000042141.5|Dhx9|ENSMUSG00000042699.5|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm10_v2_chr7_-_30552255_30552316	0.048901	Sox6_Sox9	ENSMUST00000108165.1|BC053749|ENSMUSG00000036864.8|cDNA sequence BC053749 	ENSMUST00000153594.1|BC053749|ENSMUSG00000036864.8|cDNA sequence BC053749
mm10_v2_chr5_+_124862674_124862771	0.0488944	Sox6_Sox9	ENSMUST00000111417.2|Zfp664|ENSMUSG00000079215.2|zinc finger protein 664
mm10_v2_chr8_-_69184177_69184240	0.0480079	Sox6_Sox9	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chr1_+_86526688_86526736	0.047126	Sox6_Sox9	ENSMUST00000045897.8|Ptma|ENSMUSG00000026238.8|prothymosin alpha
mm10_v2_chr2_+_105682463_105682547	0.0459408	Sox6_Sox9	ENSMUST00000140173.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000135412.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000138365.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000145744.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr18_-_88927447_88927481	0.0456187	Sox6_Sox9	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr2_-_161109017_161109027	0.0451192	Sox6_Sox9	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr15_+_100038635_100038669	0.0446238	Sox6_Sox9	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr1_+_171331414_171331426	0.0443301	Sox6_Sox9	ENSMUST00000097467.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr5_+_14514918_14514951	0.0439241	Sox6_Sox9	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr19_+_40831248_40831292	0.0435959	Sox6_Sox9	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr5_+_74535449_74535524	0.0430205	Sox6_Sox9	ENSMUST00000080164.5|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113536.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000122245.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000120618.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113535.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113534.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr7_+_127233044_127233073	0.0419005	Sox6_Sox9	ENSMUST00000106312.3|Zfp553|ENSMUSG00000045598.9|zinc finger protein 553
mm10_v2_chr5_-_100038869_100038885	0.0418523	Sox6_Sox9	ENSMUST00000153442.1|Hnrnpdl|ENSMUSG00000029328.9|heterogeneous nuclear ribonucleoprotein D-like
mm10_v2_chr1_+_88227005_88227064	0.0409414	Sox6_Sox9	ENSMUST00000061013.6|Mroh2a|ENSMUSG00000079429.3|maestro heat-like repeat family member 2A 	ENSMUST00000113130.1|Mroh2a|ENSMUSG00000079429.3|maestro heat-like repeat family member 2A
mm10_v2_chr18_+_37333853_37333946	0.0405179	Sox6_Sox9	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr1_-_119836999_119837139	0.0402126	Sox6_Sox9	ENSMUST00000163621.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4 	ENSMUST00000168303.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr3_+_19957240_19957284	0.0386222	Sox6_Sox9	ENSMUST00000108325.2|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr14_+_75136326_75136346	0.0382169	Sox6_Sox9	ENSMUST00000145303.1|Lcp1|ENSMUSG00000021998.10|lymphocyte cytosolic protein 1
mm10_v2_chr4_+_94739276_94739300	0.0365619	Sox6_Sox9	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr7_+_141949982_141950086	0.0364699	Sox6_Sox9	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr13_-_93637961_93637961	0.0363211	Sox6_Sox9	ENSMUST00000099309.4|Bhmt|ENSMUSG00000074768.5|betaine-homocysteine methyltransferase
mm10_v2_chr15_+_79659196_79659267	0.0360747	Sox6_Sox9	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chr11_+_101733011_101733041	0.0354283	Sox6_Sox9	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr15_+_83779975_83779988	0.0352516	Sox6_Sox9	ENSMUST00000163723.1|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1
mm10_v2_chr13_-_29984219_29984353	0.0333569	Sox6_Sox9	ENSMUST00000146092.1|E2f3|ENSMUSG00000016477.11|E2F transcription factor 3
mm10_v2_chr7_-_4514368_4514483	0.0330981	Sox6_Sox9	ENSMUST00000166161.1|Tnnt1|ENSMUSG00000064179.7|troponin T1, skeletal, slow
mm10_v2_chr3_-_66296807_66296837	0.0318	Sox6_Sox9	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr9_-_29412204_29412277	0.0298789	Sox6_Sox9	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr12_-_81781121_81781176	0.0286915	Sox6_Sox9	ENSMUST00000035987.7|Map3k9|ENSMUSG00000042724.7|mitogen-activated protein kinase kinase kinase 9
mm10_v2_chr3_+_67374091_67374102	0.0277829	Sox6_Sox9	ENSMUST00000077916.5|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr17_-_27622785_27622964	0.0277319	Sox6_Sox9	ENSMUST00000176458.1|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3 	ENSMUST00000114886.1|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm10_v2_chr7_+_116093296_116093329	0.0276986	Sox6_Sox9	ENSMUST00000032899.5|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr2_-_103797617_103797662	0.0268608	Sox6_Sox9	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr14_+_54431597_54431673	0.0264864	Sox6_Sox9	ENSMUST00000089688.4|Mmp14|ENSMUSG00000000957.8|matrix metallopeptidase 14 (membrane-inserted)
mm10_v2_chr6_+_86404336_86404473	0.0245074	Sox6_Sox9	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr14_-_26638183_26638183	0.0243928	Sox6_Sox9	ENSMUST00000166902.1|4930570N19Rik|ENSMUSG00000090861.1|RIKEN cDNA 4930570N19 gene
mm10_v2_chr15_+_75596645_75596662	0.0243806	Sox6_Sox9	ENSMUST00000023243.4|Gpihbp1|ENSMUSG00000022579.4|GPI-anchored HDL-binding protein 1
mm10_v2_chr18_+_35965088_35965110	0.0241774	Sox6_Sox9	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr7_+_116093336_116093372	0.0237256	Sox6_Sox9	ENSMUST00000106608.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene 	ENSMUST00000106607.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr6_+_57702601_57702658	0.0234502	Sox6_Sox9	ENSMUST00000072954.1|Lancl2|ENSMUSG00000062190.6|LanC (bacterial lantibiotic synthetase component C)-like 2 	ENSMUST00000050077.8|Lancl2|ENSMUSG00000062190.6|LanC (bacterial lantibiotic synthetase component C)-like 2
mm10_v2_chr2_+_102659213_102659281	0.0231737	Sox6_Sox9	ENSMUST00000111213.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr4_-_155863362_155863362	0.0230198	Sox6_Sox9	ENSMUST00000030949.3|Tas1r3|ENSMUSG00000029072.3|taste receptor, type 1, member 3
mm10_v2_chr4_+_115057683_115057811	0.0224015	Sox6_Sox9	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr11_+_101732950_101732965	0.0216101	Sox6_Sox9	ENSMUST00000039152.7|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr7_-_30588717_30588749	0.0186548	Sox6_Sox9	ENSMUST00000006470.7|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B 	ENSMUST00000108154.2|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B
mm10_v2_chr4_-_132049058_132049156	0.0186407	Sox6_Sox9	ENSMUST00000105981.2|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000084253.3|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000141291.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr19_+_34217588_34217624	0.016176	Sox6_Sox9	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr1_+_187608755_187608791	0.015725	Sox6_Sox9	ENSMUST00000127489.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chrX_+_136822671_136822780	0.0155672	Sox6_Sox9	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr10_-_4387436_4387479	0.0135765	Sox6_Sox9	ENSMUST00000100077.3|Zbtb2|ENSMUSG00000075327.3|zinc finger and BTB domain containing 2
mm10_v2_chr6_-_115675871_115675964	0.0126003	Sox6_Sox9	ENSMUST00000112949.1|Raf1|ENSMUSG00000000441.11|v-raf-leukemia viral oncogene 1
mm10_v2_chr4_-_82705735_82705754	0.0124822	Sox6_Sox9	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr5_+_74535535_74535558	0.0114286	Sox6_Sox9	ENSMUST00000121950.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr1_-_119837338_119837386	0.0106209	Sox6_Sox9	ENSMUST00000163435.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chrX_+_56963325_56963325	0.0101565	Sox6_Sox9	ENSMUST00000096431.3|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr5_+_138171997_138172021	0.00862691	Sox6_Sox9	ENSMUST00000019662.4|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1 	ENSMUST00000151318.1|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1
mm10_v2_chr11_-_6444352_6444443	0.00786163	Sox6_Sox9	ENSMUST00000093346.5|H2afv|ENSMUSG00000041126.10|H2A histone family, member V 	ENSMUST00000109737.2|H2afv|ENSMUSG00000041126.10|H2A histone family, member V
mm10_v2_chr14_+_49172202_49172254	0.00643618	Sox6_Sox9	ENSMUST00000153488.1|Naa30|ENSMUSG00000036282.8|N(alpha)-acetyltransferase 30, NatC catalytic subunit
mm10_v2_chr1_-_160212864_160212892	0.00584374	Sox6_Sox9	ENSMUST00000014370.5|Cacybp|ENSMUSG00000014226.5|calcyclin binding protein
mm10_v2_chr10_+_127063599_127063655	0.00549071	Sox6_Sox9	ENSMUST00000120226.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4 	ENSMUST00000133115.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4
mm10_v2_chr13_-_54687644_54687688	0.00530624	Sox6_Sox9	ENSMUST00000129881.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr9_+_7764041_7764177	0.00423326	Sox6_Sox9	ENSMUST00000052865.9|Tmem123|ENSMUSG00000050912.9|transmembrane protein 123
mm10_v2_chr4_-_44168252_44168289	0.00416043	Sox6_Sox9	ENSMUST00000145760.1|Rnf38|ENSMUSG00000035696.9|ring finger protein 38 	ENSMUST00000128426.1|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr1_-_150465563_150465604	0.00312753	Sox6_Sox9	ENSMUST00000164600.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111902.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111901.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000006171.9|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm10_v2_chr15_-_26895049_26895049	0.00243685	Sox6_Sox9	ENSMUST00000059204.9|Fbxl7|ENSMUSG00000043556.9|F-box and leucine-rich repeat protein 7
mm10_v2_chr5_-_23616528_23616597	0.0020219	Sox6_Sox9	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr11_-_76468396_76468473	0.0015311	Sox6_Sox9	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr18_-_46212595_46212634	0.00107271	Sox6_Sox9	ENSMUST00000037011.4|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr3_-_145099024_145099104	0.000716113	Sox6_Sox9	ENSMUST00000040465.6|Clca5|ENSMUSG00000036960.6|chloride channel calcium activated 5
