mm10_v2_chr18_+_9212856_9212856	0.104542	UAAGACU	ENSMUST00000041080.5|Fzd8|ENSMUSG00000036904.5|frizzled homolog 8 (Drosophila)
mm10_v2_chr6_+_77242644_77242697	0.0911619	UAAGACU	ENSMUST00000159616.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr3_+_89520152_89520175	0.0871069	UAAGACU	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr17_+_29549783_29549798	0.0868328	UAAGACU	ENSMUST00000048677.7|Tbc1d22b|ENSMUSG00000042203.7|TBC1 domain family, member 22B
mm10_v2_chr5_+_67607873_67607889	0.0808099	UAAGACU	ENSMUST00000087241.5|Shisa3|ENSMUSG00000050010.7|shisa homolog 3 (Xenopus laevis)
mm10_v2_chr15_-_84855093_84855127	0.0798865	UAAGACU	ENSMUST00000016768.5|Phf21b|ENSMUSG00000016624.9|PHD finger protein 21B
mm10_v2_chr14_-_72709986_72710027	0.0793098	UAAGACU	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr2_-_125782834_125782870	0.0793093	UAAGACU	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr1_+_99772765_99772765	0.076165	UAAGACU	ENSMUST00000086738.3|Cntnap5b|ENSMUSG00000067028.5|contactin associated protein-like 5B
mm10_v2_chr13_-_48625571_48625594	0.0751381	UAAGACU	ENSMUST00000035824.9|Ptpdc1|ENSMUSG00000038042.9|protein tyrosine phosphatase domain containing 1
mm10_v2_chr6_-_100287441_100287465	0.0743592	UAAGACU	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chrX_-_162159717_162159732	0.0727903	UAAGACU	ENSMUST00000087085.3|Nhs|ENSMUSG00000059493.7|Nance-Horan syndrome (human)
mm10_v2_chr8_-_94012558_94012687	0.0708266	UAAGACU	ENSMUST00000053766.6|Amfr|ENSMUSG00000031751.7|autocrine motility factor receptor
mm10_v2_chr14_-_31577318_31577383	0.0703459	UAAGACU	ENSMUST00000112027.2|Colq|ENSMUSG00000057606.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
mm10_v2_chr4_-_87230435_87230477	0.0677324	UAAGACU	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm10_v2_chr17_-_63499983_63500075	0.064703	UAAGACU	ENSMUST00000024761.6|Fbxl17|ENSMUSG00000023965.7|F-box and leucine-rich repeat protein 17
mm10_v2_chr17_+_29093763_29093781	0.0644565	UAAGACU	ENSMUST00000023829.6|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr1_+_191906743_191906767	0.0573624	UAAGACU	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr8_+_61224162_61224174	0.0570523	UAAGACU	ENSMUST00000034060.5|Sh3rf1|ENSMUSG00000031642.8|SH3 domain containing ring finger 1
mm10_v2_chr18_-_16809233_16809324	0.0561257	UAAGACU	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr11_-_78697370_78697475	0.055647	UAAGACU	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr11_+_54438188_54438220	0.0546897	UAAGACU	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr12_+_32378692_32378789	0.0520006	UAAGACU	ENSMUST00000172332.2|Ccdc71l|ENSMUSG00000090946.2|coiled-coil domain containing 71 like
mm10_v2_chr9_+_45117813_45117881	0.0509687	UAAGACU	ENSMUST00000170998.1|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta 	ENSMUST00000093855.3|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta
mm10_v2_chr11_-_60220550_60220632	0.0508644	UAAGACU	ENSMUST00000020846.1|Srebf1|ENSMUSG00000020538.9|sterol regulatory element binding transcription factor 1
mm10_v2_chr1_+_82586942_82586988	0.0493804	UAAGACU	ENSMUST00000113457.2|Col4a3|ENSMUSG00000079465.2|collagen, type IV, alpha 3
mm10_v2_chr9_-_64737623_64737645	0.0422127	UAAGACU	ENSMUST00000169058.1|Rab11a|ENSMUSG00000004771.6|RAB11a, member RAS oncogene family
mm10_v2_chrX_-_164980310_164980375	0.0411523	UAAGACU	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr3_-_116424007_116424032	0.0409142	UAAGACU	ENSMUST00000090464.4|Cdc14a|ENSMUSG00000033502.8|CDC14 cell division cycle 14A
mm10_v2_chr3_-_79567679_79567764	0.0397099	UAAGACU	ENSMUST00000076136.4|Fnip2|ENSMUSG00000061175.5|folliculin interacting protein 2
mm10_v2_chrX_+_99136119_99136138	0.0380972	UAAGACU	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr14_-_63245219_63245271	0.0357374	UAAGACU	ENSMUST00000118022.1|Gata4|ENSMUSG00000021944.9|GATA binding protein 4 	ENSMUST00000067417.3|Gata4|ENSMUSG00000021944.9|GATA binding protein 4
mm10_v2_chr5_+_129941949_129942113	0.0325044	UAAGACU	ENSMUST00000051758.7|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1 	ENSMUST00000073945.4|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1
mm10_v2_chr4_+_150853919_150854050	0.032173	UAAGACU	ENSMUST00000073600.2|Errfi1|ENSMUSG00000028967.4|ERBB receptor feedback inhibitor 1
mm10_v2_chr1_+_74506044_74506105	0.032072	UAAGACU	ENSMUST00000087215.5|Rqcd1|ENSMUSG00000026174.8|rcd1 (required for cell differentiation) homolog 1 (S. pombe)
mm10_v2_chr13_-_43480973_43481005	0.0317756	UAAGACU	ENSMUST00000144326.2|Ranbp9|ENSMUSG00000038546.8|RAN binding protein 9
mm10_v2_chr6_-_54566484_54566491	0.0298145	UAAGACU	ENSMUST00000019268.4|Scrn1|ENSMUSG00000019124.4|secernin 1
mm10_v2_chr2_-_37647199_37647285	0.0286905	UAAGACU	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr10_-_118868903_118868903	0.0274445	UAAGACU	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr12_-_91590009_91590056	0.0263609	UAAGACU	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr3_+_157947414_157947510	0.0246389	UAAGACU	ENSMUST00000164582.1|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c 	ENSMUST00000040787.8|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c
mm10_v2_chr4_+_5644084_5644129	0.0232978	UAAGACU	ENSMUST00000054857.6|Fam110b|ENSMUSG00000049119.8|family with sequence similarity 110, member B
mm10_v2_chr11_-_86357570_86357614	0.0215121	UAAGACU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr5_-_5266038_5266292	0.0212334	UAAGACU	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr14_-_20546512_20546582	0.0196678	UAAGACU	ENSMUST00000022355.4|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000161445.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000159027.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr14_-_66868572_66868688	0.0188501	UAAGACU	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr11_+_44518959_44519000	0.0188321	UAAGACU	ENSMUST00000019333.3|Rnf145|ENSMUSG00000019189.7|ring finger protein 145
mm10_v2_chr13_+_80883403_80883422	0.0186356	UAAGACU	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr6_-_134566913_134566995	0.018322	UAAGACU	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr16_+_23107754_23107761	0.0178337	UAAGACU	ENSMUST00000077605.5|Eif4a2|ENSMUSG00000022884.8|eukaryotic translation initiation factor 4A2 	ENSMUST00000115341.3|Eif4a2|ENSMUSG00000022884.8|eukaryotic translation initiation factor 4A2
mm10_v2_chr6_+_38433913_38433965	0.0172241	UAAGACU	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr18_+_32163073_32163115	0.0169252	UAAGACU	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr2_+_82053222_82053311	0.0167324	UAAGACU	ENSMUST00000047527.7|Zfp804a|ENSMUSG00000070866.4|zinc finger protein 804A
mm10_v2_chr17_-_51832666_51832678	0.0165426	UAAGACU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr2_+_74711911_74711939	0.0161863	UAAGACU	ENSMUST00000111983.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr4_-_110287479_110287534	0.0155383	UAAGACU	ENSMUST00000106598.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000102723.4|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000153906.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr11_-_6475992_6476102	0.0140417	UAAGACU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr9_+_122117338_122117367	0.014019	UAAGACU	ENSMUST00000120173.1|Snrk|ENSMUSG00000038145.10|SNF related kinase 	ENSMUST00000134949.1|Snrk|ENSMUSG00000038145.10|SNF related kinase 	ENSMUST00000119215.1|Snrk|ENSMUSG00000038145.10|SNF related kinase
mm10_v2_chr8_+_117257019_117257107	0.0139812	UAAGACU	ENSMUST00000166750.1|Cmip|ENSMUSG00000034390.9|c-Maf inducing protein
mm10_v2_chr4_-_56865135_56865208	0.0134276	UAAGACU	ENSMUST00000107612.2|Ctnnal1|ENSMUSG00000038816.8|catenin (cadherin associated protein), alpha-like 1 	ENSMUST00000045142.8|Ctnnal1|ENSMUSG00000038816.8|catenin (cadherin associated protein), alpha-like 1
mm10_v2_chr4_+_41465134_41465159	0.0129799	UAAGACU	ENSMUST00000030154.6|Nudt2|ENSMUSG00000028443.6|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm10_v2_chr8_+_90828820_90828842	0.0127022	UAAGACU	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr13_-_107890059_107890073	0.012637	UAAGACU	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr19_+_41482632_41482688	0.012281	UAAGACU	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr4_+_141147911_141147971	0.011857	UAAGACU	ENSMUST00000030757.9|Fbxo42|ENSMUSG00000028920.9|F-box protein 42
mm10_v2_chr7_-_111082997_111083037	0.0113635	UAAGACU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr18_+_38250240_38250287	0.0102366	UAAGACU	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr14_-_105176860_105176918	0.00868272	UAAGACU	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr3_-_122984404_122984512	0.00489567	UAAGACU	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr11_-_82829024_82829043	0.00430368	UAAGACU	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr18_+_36281069_36281151	0.00366097	UAAGACU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr12_-_69681795_69681869	0.00309769	UAAGACU	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chr4_-_139131058_139131113	0.00279023	UAAGACU	ENSMUST00000143971.1|Minos1|ENSMUSG00000050608.5|mitochondrial inner membrane organizing system 1
mm10_v2_chr15_+_58415456_58415512	0.00276139	UAAGACU	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr10_+_95940663_95940703	0.00191419	UAAGACU	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr1_+_131827977_131828019	0.00166072	UAAGACU	ENSMUST00000086559.6|Slc41a1|ENSMUSG00000013275.9|solute carrier family 41, member 1
mm10_v2_chr4_-_41314877_41314889	0.00154765	UAAGACU	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chr11_+_97415527_97415538	0.00109146	UAAGACU	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr4_+_138216296_138216324	0.000728256	UAAGACU	ENSMUST00000105827.1|Hp1bp3|ENSMUSG00000028759.7|heterochromatin protein 1, binding protein 3
mm10_v2_chr11_-_19018956_19018973	0.000147269	UAAGACU	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
