mm10_v2_chr8_-_89044162_89044195	0.0902036	UAAUGCU	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr4_+_9844349_9844372	0.0723463	UAAUGCU	ENSMUST00000057613.2|Gdf6|ENSMUSG00000051279.2|growth differentiation factor 6
mm10_v2_chr7_+_113207465_113207595	0.0688883	UAAUGCU	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr15_-_43170809_43170834	0.0644942	UAAUGCU	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr6_+_122553799_122553816	0.060149	UAAUGCU	ENSMUST00000043301.7|Aicda|ENSMUSG00000040627.8|activation-induced cytidine deaminase
mm10_v2_chr2_+_167688915_167688973	0.0546068	UAAUGCU	ENSMUST00000070642.3|Cebpb|ENSMUSG00000056501.3|CCAAT/enhancer binding protein (C/EBP), beta
mm10_v2_chr7_+_110122299_110122350	0.0539068	UAAUGCU	ENSMUST00000033326.8|Wee1|ENSMUSG00000031016.8|WEE 1 homolog 1 (S. pombe)
mm10_v2_chr2_-_103303179_103303278	0.0418923	UAAUGCU	ENSMUST00000090475.3|Ehf|ENSMUSG00000012350.9|ets homologous factor
mm10_v2_chr18_+_76241580_76241741	0.0414601	UAAUGCU	ENSMUST00000168423.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2 	ENSMUST00000091831.6|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr7_-_70360593_70360746	0.0414207	UAAUGCU	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr19_-_34879452_34879465	0.0408388	UAAUGCU	ENSMUST00000036584.5|Pank1|ENSMUSG00000033610.9|pantothenate kinase 1
mm10_v2_chr16_-_10785525_10785543	0.0399053	UAAUGCU	ENSMUST00000038099.4|Socs1|ENSMUSG00000038037.4|suppressor of cytokine signaling 1
mm10_v2_chr2_+_126034647_126034665	0.0396192	UAAUGCU	ENSMUST00000064794.7|Fgf7|ENSMUSG00000027208.8|fibroblast growth factor 7
mm10_v2_chr8_+_76899772_76899828	0.0382591	UAAUGCU	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr15_-_84855093_84855127	0.0377987	UAAUGCU	ENSMUST00000016768.5|Phf21b|ENSMUSG00000016624.9|PHD finger protein 21B
mm10_v2_chr14_-_39472825_39473088	0.0359866	UAAUGCU	ENSMUST00000168810.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000173780.1|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000166968.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3
mm10_v2_chr12_-_110840905_110840950	0.0344439	UAAUGCU	ENSMUST00000177224.1|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000084974.4|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000070565.8|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30
mm10_v2_chr1_-_131279544_131279606	0.0337911	UAAUGCU	ENSMUST00000062108.3|Ikbke|ENSMUSG00000042349.7|inhibitor of kappaB kinase epsilon
mm10_v2_chr8_+_83608175_83608198	0.0286424	UAAUGCU	ENSMUST00000005620.8|Dnajb1|ENSMUSG00000005483.9|DnaJ (Hsp40) homolog, subfamily B, member 1
mm10_v2_chrX_-_59134421_59134445	0.0283535	UAAUGCU	ENSMUST00000033473.5|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr2_-_52676571_52676588	0.0268088	UAAUGCU	ENSMUST00000178799.1|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr11_-_86807624_86807746	0.0265543	UAAUGCU	ENSMUST00000018569.7|Dhx40|ENSMUSG00000018425.12|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm10_v2_chr12_-_46818749_46818788	0.0253239	UAAUGCU	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr2_+_58754910_58754942	0.0250357	UAAUGCU	ENSMUST00000059102.6|Upp2|ENSMUSG00000026839.10|uridine phosphorylase 2
mm10_v2_chr12_-_59219725_59219776	0.024745	UAAUGCU	ENSMUST00000043204.7|Fbxo33|ENSMUSG00000035329.7|F-box protein 33
mm10_v2_chr8_-_123894736_123894760	0.0243988	UAAUGCU	ENSMUST00000034453.4|Acta1|ENSMUSG00000031972.4|actin, alpha 1, skeletal muscle
mm10_v2_chr11_+_95712673_95712673	0.02359	UAAUGCU	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr14_+_58070547_58070547	0.023438	UAAUGCU	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr1_+_178798438_178798467	0.0227869	UAAUGCU	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr5_+_32136458_32136505	0.0217273	UAAUGCU	ENSMUST00000031017.9|Fosl2|ENSMUSG00000029135.9|fos-like antigen 2
mm10_v2_chrX_-_162643629_162643665	0.0204104	UAAUGCU	ENSMUST00000112334.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr18_+_61555258_61555290	0.0203147	UAAUGCU	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr11_-_46389509_46389525	0.0198403	UAAUGCU	ENSMUST00000020664.6|Itk|ENSMUSG00000020395.7|IL2 inducible T cell kinase
mm10_v2_chr16_-_10313940_10313968	0.0197757	UAAUGCU	ENSMUST00000078357.4|Emp2|ENSMUSG00000022505.8|epithelial membrane protein 2
mm10_v2_chr6_-_145250177_145250259	0.0194604	UAAUGCU	ENSMUST00000111710.1|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 	ENSMUST00000155145.1|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 	ENSMUST00000032399.5|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm10_v2_chr1_+_9798123_9798216	0.0194156	UAAUGCU	ENSMUST00000168907.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3 	ENSMUST00000166384.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr13_+_37826225_37826315	0.0192215	UAAUGCU	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr2_+_117121374_117121374	0.0185998	UAAUGCU	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr1_+_120340569_120340582	0.0183106	UAAUGCU	ENSMUST00000037286.8|C1ql2|ENSMUSG00000036907.8|complement component 1, q subcomponent-like 2
mm10_v2_chr10_-_115251407_115251493	0.0172453	UAAUGCU	ENSMUST00000020339.8|Tbc1d15|ENSMUSG00000020130.8|TBC1 domain family, member 15
mm10_v2_chr16_-_8672145_8672161	0.0172205	UAAUGCU	ENSMUST00000008537.8|Carhsp1|ENSMUSG00000008393.8|calcium regulated heat stable protein 1
mm10_v2_chr15_-_66831625_66831668	0.0170658	UAAUGCU	ENSMUST00000164163.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr11_+_75732869_75732975	0.0168061	UAAUGCU	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr4_+_63544747_63544772	0.0151482	UAAUGCU	ENSMUST00000035301.6|Atp6v1g1|ENSMUSG00000039105.6|ATPase, H+ transporting, lysosomal V1 subunit G1
mm10_v2_chr15_-_36794498_36794547	0.0151246	UAAUGCU	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr5_-_141000590_141000632	0.0147264	UAAUGCU	ENSMUST00000085786.5|Card11|ENSMUSG00000036526.7|caspase recruitment domain family, member 11
mm10_v2_chr15_-_50889691_50889714	0.0147255	UAAUGCU	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr5_-_24842579_24842624	0.0145917	UAAUGCU	ENSMUST00000030787.8|Rheb|ENSMUSG00000028945.8|Ras homolog enriched in brain
mm10_v2_chr11_-_59839828_59839843	0.0141432	UAAUGCU	ENSMUST00000019517.3|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr11_-_103267405_103267472	0.0140655	UAAUGCU	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr5_-_36484112_36484302	0.0139969	UAAUGCU	ENSMUST00000119916.1|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B 	ENSMUST00000031097.7|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B
mm10_v2_chr3_-_69127098_69127113	0.0134558	UAAUGCU	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr9_+_107340593_107340648	0.0134382	UAAUGCU	ENSMUST00000042581.2|6430571L13Rik|ENSMUSG00000037977.5|RIKEN cDNA 6430571L13 gene
mm10_v2_chr16_+_35983307_35983395	0.0130758	UAAUGCU	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr1_-_180813591_180813632	0.0114787	UAAUGCU	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr16_-_84735742_84735795	0.0113515	UAAUGCU	ENSMUST00000116584.1|Mrpl39|ENSMUSG00000022889.7|mitochondrial ribosomal protein L39
mm10_v2_chr11_-_80779989_80780033	0.010964	UAAUGCU	ENSMUST00000041065.7|Myo1d|ENSMUSG00000035441.8|myosin ID 	ENSMUST00000070997.5|Myo1d|ENSMUSG00000035441.8|myosin ID
mm10_v2_chr1_-_182019927_182019989	0.010881	UAAUGCU	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chrX_+_58030622_58030643	0.0100952	UAAUGCU	ENSMUST00000088627.4|Zic3|ENSMUSG00000067860.5|zinc finger protein of the cerebellum 3
mm10_v2_chr17_-_51832666_51832678	0.00996624	UAAUGCU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr2_+_131262469_131262563	0.00994586	UAAUGCU	ENSMUST00000150843.1|Pank2|ENSMUSG00000037514.11|pantothenate kinase 2
mm10_v2_chr19_+_5637475_5637486	0.00986426	UAAUGCU	ENSMUST00000025867.5|Rela|ENSMUSG00000024927.7|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm10_v2_chr6_+_115931922_115931937	0.00961222	UAAUGCU	ENSMUST00000032471.6|Rho|ENSMUSG00000030324.6|rhodopsin
mm10_v2_chr19_+_6276725_6276792	0.0095757	UAAUGCU	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr11_-_104442232_104442291	0.00952617	UAAUGCU	ENSMUST00000106977.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1 	ENSMUST00000106972.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1
mm10_v2_chr19_-_58794436_58794461	0.0091543	UAAUGCU	ENSMUST00000028299.4|1700019N19Rik|ENSMUSG00000026931.4|RIKEN cDNA 1700019N19 gene
mm10_v2_chr16_+_45158725_45158810	0.00870865	UAAUGCU	ENSMUST00000023343.3|Atg3|ENSMUSG00000022663.3|autophagy related 3
mm10_v2_chr11_+_78188422_78188447	0.0086411	UAAUGCU	ENSMUST00000002128.7|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family 	ENSMUST00000150941.1|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family
mm10_v2_chr5_+_64803513_64803530	0.00852002	UAAUGCU	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr6_-_88446491_88446539	0.00839335	UAAUGCU	ENSMUST00000165242.1|Eefsec|ENSMUSG00000033216.7|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm10_v2_chr19_+_29367447_29367468	0.0081338	UAAUGCU	ENSMUST00000016640.7|Cd274|ENSMUSG00000016496.7|CD274 antigen
mm10_v2_chr8_+_26977336_26977398	0.00803905	UAAUGCU	ENSMUST00000154256.1|Zfp703|ENSMUSG00000085795.1|zinc finger protein 703 	ENSMUST00000127097.1|Zfp703|ENSMUSG00000085795.1|zinc finger protein 703
mm10_v2_chr18_+_76944384_76944444	0.00795304	UAAUGCU	ENSMUST00000156454.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000150990.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000026485.7|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000148955.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2
mm10_v2_chr18_+_38418946_38418985	0.00748572	UAAUGCU	ENSMUST00000025293.3|Ndfip1|ENSMUSG00000024425.3|Nedd4 family interacting protein 1
mm10_v2_chr1_-_151428440_151428474	0.0071389	UAAUGCU	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr5_+_110879788_110879842	0.00707098	UAAUGCU	ENSMUST00000156290.2|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28 	ENSMUST00000040111.9|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28
mm10_v2_chr7_-_119895697_119895752	0.00696609	UAAUGCU	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr5_-_66173051_66173117	0.00665325	UAAUGCU	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr19_+_55742242_55742468	0.00662132	UAAUGCU	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr4_+_134923589_134923593	0.00656425	UAAUGCU	ENSMUST00000078084.6|D4Wsu53e|ENSMUSG00000037266.12|DNA segment, Chr 4, Wayne State University 53, expressed
mm10_v2_chr7_-_142061021_142061071	0.00643936	UAAUGCU	ENSMUST00000084418.2|Mob2|ENSMUSG00000025147.6|MOB kinase activator 2
mm10_v2_chr3_+_41555723_41555745	0.00634732	UAAUGCU	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr18_-_67724560_67724599	0.00617226	UAAUGCU	ENSMUST00000120934.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000025420.7|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000122412.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2
mm10_v2_chr1_+_133363564_133363581	0.00600529	UAAUGCU	ENSMUST00000135222.2|Etnk2|ENSMUSG00000070644.7|ethanolamine kinase 2
mm10_v2_chr18_-_88894322_88894371	0.00585009	UAAUGCU	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr19_-_7341792_7341829	0.00554481	UAAUGCU	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr4_-_82505749_82505802	0.00545172	UAAUGCU	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr1_+_85793411_85793541	0.00539499	UAAUGCU	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr8_+_12395287_12395295	0.00506501	UAAUGCU	ENSMUST00000180353.1|Sox1|ENSMUSG00000096014.1|SRY-box containing gene 1
mm10_v2_chr1_-_143702832_143702893	0.00503309	UAAUGCU	ENSMUST00000018337.7|Cdc73|ENSMUSG00000026361.7|cell division cycle 73, Paf1/RNA polymerase II complex component
mm10_v2_chr7_-_67372846_67372858	0.00493523	UAAUGCU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr4_+_97777606_97777632	0.0045989	UAAUGCU	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chrX_-_71492799_71492860	0.00458149	UAAUGCU	ENSMUST00000037391.5|Cd99l2|ENSMUSG00000035776.8|CD99 antigen-like 2 	ENSMUST00000114586.2|Cd99l2|ENSMUSG00000035776.8|CD99 antigen-like 2 	ENSMUST00000114587.2|Cd99l2|ENSMUSG00000035776.8|CD99 antigen-like 2
mm10_v2_chr19_-_53390559_53390581	0.00448579	UAAUGCU	ENSMUST00000025997.5|Smndc1|ENSMUSG00000025024.6|survival motor neuron domain containing 1
mm10_v2_chrX_+_159255782_159255899	0.00422818	UAAUGCU	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr4_-_148087961_148088031	0.0042141	UAAUGCU	ENSMUST00000030865.8|Agtrap|ENSMUSG00000029007.8|angiotensin II, type I receptor-associated protein
mm10_v2_chr4_+_6365650_6365720	0.00415112	UAAUGCU	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr3_-_84304762_84304809	0.00400688	UAAUGCU	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr5_+_93093428_93093457	0.00386573	UAAUGCU	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr7_-_47008397_47008421	0.00368529	UAAUGCU	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr17_-_88065291_88065291	0.00354659	UAAUGCU	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr16_-_4789984_4789995	0.00331551	UAAUGCU	ENSMUST00000004173.5|Cdip1|ENSMUSG00000004071.6|cell death inducing Trp53 target 1
mm10_v2_chr3_-_37232565_37232637	0.00312598	UAAUGCU	ENSMUST00000161015.1|Il21|ENSMUSG00000027718.2|interleukin 21 	ENSMUST00000029273.1|Il21|ENSMUSG00000027718.2|interleukin 21
mm10_v2_chr9_+_70678950_70679010	0.0030452	UAAUGCU	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr17_-_10319324_10319380	0.00299588	UAAUGCU	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr2_+_129065934_129065994	0.0029089	UAAUGCU	ENSMUST00000035812.7|Ttl|ENSMUSG00000027394.7|tubulin tyrosine ligase
mm10_v2_chr16_-_21694570_21694665	0.00267302	UAAUGCU	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr19_+_6046576_6046662	0.00194623	UAAUGCU	ENSMUST00000138532.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000129081.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000156550.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr19_-_59943647_59943678	0.00186906	UAAUGCU	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chrX_+_166238901_166238914	0.00167686	UAAUGCU	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr12_+_105784694_105784872	0.00159914	UAAUGCU	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr17_+_86963077_86963094	0.00128409	UAAUGCU	ENSMUST00000024956.8|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr3_-_115715031_115715062	0.00128336	UAAUGCU	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr11_+_94629741_94629834	0.00115853	UAAUGCU	ENSMUST00000021239.6|Lrrc59|ENSMUSG00000020869.8|leucine rich repeat containing 59
mm10_v2_chr12_-_51691883_51691925	0.00115492	UAAUGCU	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chrX_-_74368547_74368673	0.00105337	UAAUGCU	ENSMUST00000155676.1|Ubl4|ENSMUSG00000015290.9|ubiquitin-like 4
mm10_v2_chr14_-_40966807_40966848	0.00102773	UAAUGCU	ENSMUST00000047652.5|Tspan14|ENSMUSG00000037824.5|tetraspanin 14
mm10_v2_chr6_-_120038647_120038699	0.000552984	UAAUGCU	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr4_+_98395768_98395796	0.000519793	UAAUGCU	ENSMUST00000041284.3|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr7_+_82867327_82867357	0.00041581	UAAUGCU	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr2_-_72980402_72980471	0.000332903	UAAUGCU	ENSMUST00000066003.6|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3 	ENSMUST00000102689.3|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3
mm10_v2_chr19_+_55316313_55316367	0.000176308	UAAUGCU	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr9_-_114026711_114026764	0.000112738	UAAUGCU	ENSMUST00000117537.1|Fbxl2|ENSMUSG00000032507.9|F-box and leucine-rich repeat protein 2 	ENSMUST00000035090.7|Fbxl2|ENSMUSG00000032507.9|F-box and leucine-rich repeat protein 2
mm10_v2_chr9_+_68653761_68653786	4.78573e-05	UAAUGCU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
