mm10_v2_chr14_-_24245913_24245925	0.305281	UGAAAUG	ENSMUST00000073687.6|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila) 	ENSMUST00000090398.4|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila)
mm10_v2_chr7_+_113207465_113207595	0.28142	UGAAAUG	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr18_-_22171392_22171423	0.208611	UGAAAUG	ENSMUST00000025160.2|Ccdc178|ENSMUSG00000024306.6|coiled coil domain containing 178
mm10_v2_chr15_-_71727815_71727848	0.191132	UGAAAUG	ENSMUST00000022953.8|Fam135b|ENSMUSG00000036800.7|family with sequence similarity 135, member B
mm10_v2_chr1_-_158958367_158958367	0.183008	UGAAAUG	ENSMUST00000159861.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr12_-_11436607_11436649	0.164372	UGAAAUG	ENSMUST00000072299.5|Vsnl1|ENSMUSG00000054459.6|visinin-like 1
mm10_v2_chr1_-_157412576_157412621	0.163967	UGAAAUG	ENSMUST00000078308.6|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2 	ENSMUST00000139470.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr4_-_142239356_142239418	0.160782	UGAAAUG	ENSMUST00000036476.3|Kazn|ENSMUSG00000040606.7|kazrin, periplakin interacting protein
mm10_v2_chr17_-_63499983_63500075	0.157982	UGAAAUG	ENSMUST00000024761.6|Fbxl17|ENSMUSG00000023965.7|F-box and leucine-rich repeat protein 17
mm10_v2_chr4_+_104766308_104766331	0.157482	UGAAAUG	ENSMUST00000031663.3|C8b|ENSMUSG00000029656.7|complement component 8, beta polypeptide
mm10_v2_chr5_+_130219706_130219744	0.157266	UGAAAUG	ENSMUST00000065329.6|Tmem248|ENSMUSG00000053094.9|transmembrane protein 248
mm10_v2_chr1_+_167001417_167001431	0.154579	UGAAAUG	ENSMUST00000165874.1|Fam78b|ENSMUSG00000060568.8|family with sequence similarity 78, member B
mm10_v2_chr1_-_9967932_9967932	0.153023	UGAAAUG	ENSMUST00000185184.1|Tcf24|ENSMUSG00000099032.1|transcription factor 24
mm10_v2_chr18_+_61555258_61555290	0.14224	UGAAAUG	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr14_+_118137101_118137178	0.139749	UGAAAUG	ENSMUST00000022728.2|Gpr180|ENSMUSG00000022131.2|G protein-coupled receptor 180
mm10_v2_chr3_-_89387132_89387189	0.135283	UGAAAUG	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr8_-_26119125_26119233	0.133564	UGAAAUG	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chrX_-_20291776_20291834	0.131762	UGAAAUG	ENSMUST00000072451.4|Slc9a7|ENSMUSG00000037341.7|solute carrier family 9 (sodium/hydrogen exchanger), member 7
mm10_v2_chr4_+_54947976_54948054	0.130739	UGAAAUG	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr2_+_157424255_157424322	0.12692	UGAAAUG	ENSMUST00000029175.7|Src|ENSMUSG00000027646.9|Rous sarcoma oncogene 	ENSMUST00000092576.4|Src|ENSMUSG00000027646.9|Rous sarcoma oncogene
mm10_v2_chr13_-_52981027_52981083	0.12621	UGAAAUG	ENSMUST00000071065.7|Nfil3|ENSMUSG00000056749.7|nuclear factor, interleukin 3, regulated
mm10_v2_chr17_-_28486082_28486149	0.12544	UGAAAUG	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr19_+_53529100_53529109	0.122015	UGAAAUG	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr13_+_75089826_75089886	0.121732	UGAAAUG	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr12_-_118301429_118301458	0.110577	UGAAAUG	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr11_-_108343917_108343941	0.109926	UGAAAUG	ENSMUST00000059595.4|Prkca|ENSMUSG00000050965.8|protein kinase C, alpha
mm10_v2_chr8_-_90348343_90348386	0.109595	UGAAAUG	ENSMUST00000109621.3|Tox3|ENSMUSG00000043668.7|TOX high mobility group box family member 3
mm10_v2_chr10_-_84440591_84440604	0.106962	UGAAAUG	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr7_+_19094594_19094633	0.102898	UGAAAUG	ENSMUST00000049454.5|Six5|ENSMUSG00000040841.5|sine oculis-related homeobox 5
mm10_v2_chr13_-_34345174_34345273	0.102589	UGAAAUG	ENSMUST00000040336.5|Slc22a23|ENSMUSG00000038267.8|solute carrier family 22, member 23
mm10_v2_chr16_+_24393350_24393428	0.100702	UGAAAUG	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr1_-_58586191_58586323	0.0999416	UGAAAUG	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr11_-_40755201_40755311	0.0994977	UGAAAUG	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr15_-_101850778_101850792	0.0976714	UGAAAUG	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr10_+_17723220_17723229	0.0956876	UGAAAUG	ENSMUST00000038107.7|Cited2|ENSMUSG00000039910.9|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm10_v2_chr5_+_28071356_28071372	0.095023	UGAAAUG	ENSMUST00000059155.10|Insig1|ENSMUSG00000045294.10|insulin induced gene 1
mm10_v2_chr12_-_21417356_21417436	0.0920764	UGAAAUG	ENSMUST00000103002.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr1_+_136624901_136624949	0.0904569	UGAAAUG	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr11_+_34314757_34314822	0.0897315	UGAAAUG	ENSMUST00000165963.1|Fam196b|ENSMUSG00000069911.4|family with sequence similarity 196, member B 	ENSMUST00000093192.3|Fam196b|ENSMUSG00000069911.4|family with sequence similarity 196, member B
mm10_v2_chr15_+_18818895_18818947	0.0895169	UGAAAUG	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr6_+_47454320_47454423	0.0876812	UGAAAUG	ENSMUST00000031697.8|Cul1|ENSMUSG00000029686.9|cullin 1
mm10_v2_chr11_-_47379405_47379522	0.0874232	UGAAAUG	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr5_-_66173051_66173117	0.0852384	UGAAAUG	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr5_-_45639501_45639525	0.0851234	UGAAAUG	ENSMUST00000016023.7|Fam184b|ENSMUSG00000015879.7|family with sequence similarity 184, member B
mm10_v2_chr2_+_24367565_24367620	0.0843602	UGAAAUG	ENSMUST00000102942.1|Psd4|ENSMUSG00000026979.10|pleckstrin and Sec7 domain containing 4
mm10_v2_chr3_+_58415689_58415689	0.0829465	UGAAAUG	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr5_-_103100054_103100088	0.0829313	UGAAAUG	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr13_+_104287855_104287882	0.0816255	UGAAAUG	ENSMUST00000065766.6|Adamts6|ENSMUSG00000046169.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm10_v2_chr11_-_78697370_78697475	0.0807056	UGAAAUG	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr15_-_36164872_36164884	0.0797411	UGAAAUG	ENSMUST00000058643.3|Fbxo43|ENSMUSG00000048230.5|F-box protein 43
mm10_v2_chr5_-_76304474_76304548	0.0794571	UGAAAUG	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr4_-_126968124_126968154	0.0788241	UGAAAUG	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr4_+_133518963_133519083	0.0788175	UGAAAUG	ENSMUST00000149807.1|1810019J16Rik|ENSMUSG00000037600.10|RIKEN cDNA 1810019J16 gene 	ENSMUST00000042919.9|1810019J16Rik|ENSMUSG00000037600.10|RIKEN cDNA 1810019J16 gene 	ENSMUST00000153811.1|1810019J16Rik|ENSMUSG00000037600.10|RIKEN cDNA 1810019J16 gene 	ENSMUST00000105901.1|1810019J16Rik|ENSMUSG00000037600.10|RIKEN cDNA 1810019J16 gene 	ENSMUST00000121797.1|1810019J16Rik|ENSMUSG00000037600.10|RIKEN cDNA 1810019J16 gene
mm10_v2_chr2_+_22622183_22622205	0.0788163	UGAAAUG	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr15_+_102470632_102470716	0.0766192	UGAAAUG	ENSMUST00000077037.5|Pcbp2|ENSMUSG00000056851.7|poly(rC) binding protein 2 	ENSMUST00000078404.7|Pcbp2|ENSMUSG00000056851.7|poly(rC) binding protein 2 	ENSMUST00000108838.3|Pcbp2|ENSMUSG00000056851.7|poly(rC) binding protein 2
mm10_v2_chr5_-_112577186_112577204	0.0765315	UGAAAUG	ENSMUST00000079491.7|Sez6l|ENSMUSG00000058153.8|seizure related 6 homolog like 	ENSMUST00000075387.6|Sez6l|ENSMUSG00000058153.8|seizure related 6 homolog like
mm10_v2_chr16_-_30310773_30310789	0.075549	UGAAAUG	ENSMUST00000061190.6|Gp5|ENSMUSG00000047953.6|glycoprotein 5 (platelet)
mm10_v2_chr3_+_14533817_14533866	0.0745292	UGAAAUG	ENSMUST00000169079.1|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1 	ENSMUST00000091325.3|Lrrcc1|ENSMUSG00000027550.8|leucine rich repeat and coiled-coil domain containing 1
mm10_v2_chr14_+_73237891_73238007	0.0741714	UGAAAUG	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr15_-_50889691_50889714	0.0729964	UGAAAUG	ENSMUST00000165201.2|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human) 	ENSMUST00000184458.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr10_+_34483400_34483445	0.0726636	UGAAAUG	ENSMUST00000019913.7|Frk|ENSMUSG00000019779.8|fyn-related kinase 	ENSMUST00000170771.1|Frk|ENSMUSG00000019779.8|fyn-related kinase
mm10_v2_chr6_+_8259379_8259460	0.0718762	UGAAAUG	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr3_-_131272077_131272101	0.0714093	UGAAAUG	ENSMUST00000029610.8|Hadh|ENSMUSG00000027984.8|hydroxyacyl-Coenzyme A dehydrogenase
mm10_v2_chr8_-_47675130_47675165	0.0708838	UGAAAUG	ENSMUST00000080353.2|Ing2|ENSMUSG00000063049.4|inhibitor of growth family, member 2
mm10_v2_chr7_-_90457167_90457229	0.0707589	UGAAAUG	ENSMUST00000032844.5|Tmem126a|ENSMUSG00000030615.5|transmembrane protein 126A
mm10_v2_chr12_+_76533540_76533597	0.0707346	UGAAAUG	ENSMUST00000075249.4|Plekhg3|ENSMUSG00000052609.8|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm10_v2_chr8_-_33641940_33641981	0.0701439	UGAAAUG	ENSMUST00000095349.4|Ubxn8|ENSMUSG00000052906.6|UBX domain protein 8
mm10_v2_chr12_+_80644212_80644265	0.0661584	UGAAAUG	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr11_+_31872100_31872226	0.065738	UGAAAUG	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr18_+_44380479_44380554	0.0653182	UGAAAUG	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr4_-_87230435_87230477	0.0649423	UGAAAUG	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm10_v2_chr15_+_80173642_80173721	0.064068	UGAAAUG	ENSMUST00000044970.6|Mgat3|ENSMUSG00000042428.6|mannoside acetylglucosaminyltransferase 3
mm10_v2_chr3_-_59344256_59344367	0.0638524	UGAAAUG	ENSMUST00000039419.6|Igsf10|ENSMUSG00000036334.7|immunoglobulin superfamily, member 10
mm10_v2_chr11_+_97799565_97799581	0.063573	UGAAAUG	ENSMUST00000043843.5|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr2_+_73271925_73271939	0.0608936	UGAAAUG	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr3_+_89520152_89520175	0.06085	UGAAAUG	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr2_+_48814109_48814173	0.0603884	UGAAAUG	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr3_+_159839729_159839745	0.0590812	UGAAAUG	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr12_-_35534973_35535058	0.0587695	UGAAAUG	ENSMUST00000116436.2|Ahr|ENSMUSG00000019256.11|aryl-hydrocarbon receptor
mm10_v2_chr8_-_41374602_41374773	0.0556762	UGAAAUG	ENSMUST00000110417.1|Asah1|ENSMUSG00000031591.8|N-acylsphingosine amidohydrolase 1 	ENSMUST00000034000.8|Asah1|ENSMUSG00000031591.8|N-acylsphingosine amidohydrolase 1 	ENSMUST00000143057.1|Asah1|ENSMUSG00000031591.8|N-acylsphingosine amidohydrolase 1
mm10_v2_chr6_+_17463749_17463809	0.0555092	UGAAAUG	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chrX_-_13846508_13846591	0.0545956	UGAAAUG	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr1_+_9798123_9798216	0.0544781	UGAAAUG	ENSMUST00000168907.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3 	ENSMUST00000166384.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr4_+_43441939_43441939	0.0543476	UGAAAUG	ENSMUST00000060864.6|Tesk1|ENSMUSG00000028458.6|testis specific protein kinase 1
mm10_v2_chr6_+_108783059_108783116	0.0537668	UGAAAUG	ENSMUST00000032196.6|Arl8b|ENSMUSG00000030105.6|ADP-ribosylation factor-like 8B
mm10_v2_chr12_-_54656496_54656572	0.0530504	UGAAAUG	ENSMUST00000056228.6|Sptssa|ENSMUSG00000044408.6|serine palmitoyltransferase, small subunit A
mm10_v2_chr2_+_153649442_153649460	0.0529893	UGAAAUG	ENSMUST00000072997.3|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000109773.1|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000109774.2|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000081628.6|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000103151.1|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000088976.5|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000109772.1|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000103150.3|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B 	ENSMUST00000056495.7|Dnmt3b|ENSMUSG00000027478.9|DNA methyltransferase 3B
mm10_v2_chr1_+_152954966_152955101	0.0523683	UGAAAUG	ENSMUST00000043313.8|Nmnat2|ENSMUSG00000042751.8|nicotinamide nucleotide adenylyltransferase 2
mm10_v2_chr6_-_13839916_13839942	0.052315	UGAAAUG	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr5_+_13399309_13399382	0.0512515	UGAAAUG	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr14_+_25459206_25459225	0.0511827	UGAAAUG	ENSMUST00000162645.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr13_+_104178797_104178872	0.0506924	UGAAAUG	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr5_+_88886809_88886825	0.0505796	UGAAAUG	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr5_+_139791513_139791539	0.0497356	UGAAAUG	ENSMUST00000018287.3|Mafk|ENSMUSG00000018143.4|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
mm10_v2_chr19_+_5425121_5425173	0.0496486	UGAAAUG	ENSMUST00000159759.1|AI837181|ENSMUSG00000047423.9|expressed sequence AI837181
mm10_v2_chr1_-_119504736_119504795	0.0492139	UGAAAUG	ENSMUST00000004565.8|Ralb|ENSMUSG00000004451.8|v-ral simian leukemia viral oncogene homolog B (ras related)
mm10_v2_chr12_+_80790532_80790574	0.0491499	UGAAAUG	ENSMUST00000068519.5|4933426M11Rik|ENSMUSG00000021133.8|RIKEN cDNA 4933426M11 gene
mm10_v2_chr13_+_48261427_48261427	0.0488073	UGAAAUG	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr18_+_35771488_35771559	0.0483063	UGAAAUG	ENSMUST00000170693.1|Ube2d2a|ENSMUSG00000091896.1|ubiquitin-conjugating enzyme E2D 2A
mm10_v2_chr2_+_62664279_62664300	0.0479894	UGAAAUG	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr3_+_60501252_60501275	0.0478811	UGAAAUG	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr4_-_111902754_111902918	0.0476051	UGAAAUG	ENSMUST00000102719.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9 	ENSMUST00000102721.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm10_v2_chrX_-_51205773_51205839	0.0473678	UGAAAUG	ENSMUST00000114875.1|Mbnl3|ENSMUSG00000036109.11|muscleblind-like 3 (Drosophila)
mm10_v2_chr3_+_28263205_28263215	0.0472347	UGAAAUG	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr16_+_78301458_78301496	0.0471321	UGAAAUG	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr4_+_105157339_105157354	0.046731	UGAAAUG	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chr18_-_9450097_9450161	0.0465633	UGAAAUG	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr17_+_26715644_26715724	0.0462265	UGAAAUG	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr1_+_132417409_132417464	0.0459399	UGAAAUG	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr5_-_5749317_5749340	0.0458292	UGAAAUG	ENSMUST00000015796.2|Steap1|ENSMUSG00000015652.3|six transmembrane epithelial antigen of the prostate 1
mm10_v2_chr10_+_41490436_41490483	0.0455901	UGAAAUG	ENSMUST00000105507.3|Ppil6|ENSMUSG00000078451.4|peptidylprolyl isomerase (cyclophilin)-like 6
mm10_v2_chr19_+_55316313_55316367	0.0449801	UGAAAUG	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr10_+_111164794_111164811	0.0448536	UGAAAUG	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr2_-_37647199_37647285	0.0447015	UGAAAUG	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr2_+_143546144_143546215	0.0440628	UGAAAUG	ENSMUST00000028905.9|Pcsk2|ENSMUSG00000027419.9|proprotein convertase subtilisin/kexin type 2
mm10_v2_chr3_-_80913528_80913666	0.0437932	UGAAAUG	ENSMUST00000107743.1|Glrb|ENSMUSG00000028020.10|glycine receptor, beta subunit 	ENSMUST00000029654.8|Glrb|ENSMUSG00000028020.10|glycine receptor, beta subunit
mm10_v2_chr5_-_36484112_36484302	0.0435944	UGAAAUG	ENSMUST00000119916.1|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B 	ENSMUST00000031097.7|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B
mm10_v2_chr19_+_41482632_41482688	0.0433322	UGAAAUG	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr18_+_12128850_12128868	0.0431984	UGAAAUG	ENSMUST00000025270.6|Riok3|ENSMUSG00000024404.6|RIO kinase 3
mm10_v2_chr14_+_21499770_21499883	0.0429639	UGAAAUG	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr2_-_168230353_168230386	0.0418356	UGAAAUG	ENSMUST00000154111.1|Dpm1|ENSMUSG00000078919.4|dolichol-phosphate (beta-D) mannosyltransferase 1
mm10_v2_chr3_-_116007399_116007411	0.0411176	UGAAAUG	ENSMUST00000067485.3|Slc30a7|ENSMUSG00000054414.3|solute carrier family 30 (zinc transporter), member 7
mm10_v2_chr1_+_89454769_89454885	0.0410459	UGAAAUG	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr14_-_27508460_27508503	0.0409079	UGAAAUG	ENSMUST00000050480.6|Ccdc66|ENSMUSG00000046753.9|coiled-coil domain containing 66
mm10_v2_chr12_-_79089623_79089670	0.0405885	UGAAAUG	ENSMUST00000072154.7|Pigh|ENSMUSG00000021120.10|phosphatidylinositol glycan anchor biosynthesis, class H
mm10_v2_chr16_-_31275277_31275290	0.0400099	UGAAAUG	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr2_+_121955964_121956001	0.0397663	UGAAAUG	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr5_-_123865491_123865518	0.0392549	UGAAAUG	ENSMUST00000057145.5|Niacr1|ENSMUSG00000045502.5|niacin receptor 1
mm10_v2_chr8_-_94012558_94012687	0.0389842	UGAAAUG	ENSMUST00000053766.6|Amfr|ENSMUSG00000031751.7|autocrine motility factor receptor
mm10_v2_chr8_+_108714644_108714644	0.0388009	UGAAAUG	ENSMUST00000043896.8|Zfhx3|ENSMUSG00000038872.8|zinc finger homeobox 3
mm10_v2_chr10_-_39960144_39960162	0.0385159	UGAAAUG	ENSMUST00000095749.4|G630090E17Rik|ENSMUSG00000071335.4|RIKEN cDNA G630090E17 gene
mm10_v2_chr1_+_85793411_85793541	0.0385088	UGAAAUG	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr11_+_88068242_88068289	0.0384536	UGAAAUG	ENSMUST00000018521.4|Vezf1|ENSMUSG00000018377.4|vascular endothelial zinc finger 1
mm10_v2_chr5_-_123879992_123880020	0.0376657	UGAAAUG	ENSMUST00000164267.1|Gpr81|ENSMUSG00000049241.5|G protein-coupled receptor 81
mm10_v2_chr8_+_105636509_105636589	0.0376152	UGAAAUG	ENSMUST00000005841.9|Ctcf|ENSMUSG00000005698.9|CCCTC-binding factor
mm10_v2_chr4_-_101265236_101265282	0.0374963	UGAAAUG	ENSMUST00000149297.1|Jak1|ENSMUSG00000028530.8|Janus kinase 1 	ENSMUST00000102781.3|Jak1|ENSMUSG00000028530.8|Janus kinase 1
mm10_v2_chr13_-_103334429_103334500	0.037252	UGAAAUG	ENSMUST00000167058.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000164111.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr3_+_126596951_126596986	0.0368284	UGAAAUG	ENSMUST00000106402.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta
mm10_v2_chrX_-_17572241_17572325	0.0359162	UGAAAUG	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr9_-_76323559_76323611	0.0352914	UGAAAUG	ENSMUST00000063140.8|Hcrtr2|ENSMUSG00000032360.10|hypocretin (orexin) receptor 2
mm10_v2_chr4_-_123750236_123750345	0.0352466	UGAAAUG	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr11_-_106160101_106160168	0.0351708	UGAAAUG	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr1_+_176814660_176814660	0.0347766	UGAAAUG	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chrX_+_160390684_160390730	0.0346221	UGAAAUG	ENSMUST00000112408.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112402.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112401.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112400.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112405.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112404.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000146805.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64
mm10_v2_chr3_-_105801323_105801377	0.0346112	UGAAAUG	ENSMUST00000090678.6|Rap1a|ENSMUSG00000068798.6|RAS-related protein-1a
mm10_v2_chr9_-_59750616_59750649	0.0344418	UGAAAUG	ENSMUST00000163586.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000177963.1|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8 	ENSMUST00000051039.4|Senp8|ENSMUSG00000051705.6|SUMO/sentrin specific peptidase 8
mm10_v2_chr4_-_11322109_11322146	0.0343378	UGAAAUG	ENSMUST00000084892.5|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans) 	ENSMUST00000128024.1|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans)
mm10_v2_chr17_-_46031813_46031863	0.0342841	UGAAAUG	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr19_+_18749983_18749983	0.0342599	UGAAAUG	ENSMUST00000040489.7|Trpm6|ENSMUSG00000024727.8|transient receptor potential cation channel, subfamily M, member 6
mm10_v2_chr15_+_30172570_30172600	0.0340629	UGAAAUG	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr2_+_131262469_131262563	0.0339314	UGAAAUG	ENSMUST00000150843.1|Pank2|ENSMUSG00000037514.11|pantothenate kinase 2
mm10_v2_chr5_+_130171798_130171879	0.0335955	UGAAAUG	ENSMUST00000119797.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000148264.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr2_-_63184253_63184292	0.0335611	UGAAAUG	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr2_-_73892530_73892555	0.0333758	UGAAAUG	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr3_+_105452326_105452365	0.033331	UGAAAUG	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr13_-_24831409_24831518	0.0332905	UGAAAUG	ENSMUST00000006900.6|Acot13|ENSMUSG00000006717.6|acyl-CoA thioesterase 13
mm10_v2_chr3_+_30792876_30792876	0.0326207	UGAAAUG	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr2_+_146221921_146221921	0.032575	UGAAAUG	ENSMUST00000089257.4|Insm1|ENSMUSG00000068154.4|insulinoma-associated 1
mm10_v2_chr17_-_80728026_80728093	0.0321676	UGAAAUG	ENSMUST00000112389.2|Map4k3|ENSMUSG00000024242.8|mitogen-activated protein kinase kinase kinase kinase 3 	ENSMUST00000025089.7|Map4k3|ENSMUSG00000024242.8|mitogen-activated protein kinase kinase kinase kinase 3
mm10_v2_chr12_-_87200200_87200284	0.0320596	UGAAAUG	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr7_+_83584910_83585092	0.0315335	UGAAAUG	ENSMUST00000039317.7|Tmc3|ENSMUSG00000038540.8|transmembrane channel-like gene family 3 	ENSMUST00000164944.1|Tmc3|ENSMUSG00000038540.8|transmembrane channel-like gene family 3
mm10_v2_chr10_+_108162358_108162408	0.0313468	UGAAAUG	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr14_+_21052574_21052633	0.0309785	UGAAAUG	ENSMUST00000045376.9|Adk|ENSMUSG00000039197.9|adenosine kinase
mm10_v2_chr1_+_174501796_174501843	0.0309103	UGAAAUG	ENSMUST00000030039.7|Fmn2|ENSMUSG00000028354.8|formin 2
mm10_v2_chr13_-_17805093_17805189	0.0307516	UGAAAUG	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chr11_+_53350783_53350833	0.0306302	UGAAAUG	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr18_-_88894322_88894371	0.0296984	UGAAAUG	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr11_-_88718223_88718294	0.0296415	UGAAAUG	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr13_-_64274879_64274947	0.029115	UGAAAUG	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr1_-_23383149_23383225	0.0290646	UGAAAUG	ENSMUST00000027343.5|Ogfrl1|ENSMUSG00000026158.5|opioid growth factor receptor-like 1
mm10_v2_chr11_-_96977660_96977711	0.0290261	UGAAAUG	ENSMUST00000107626.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor 	ENSMUST00000107624.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor
mm10_v2_chr4_+_124986430_124986490	0.0287136	UGAAAUG	ENSMUST00000030687.7|Rspo1|ENSMUSG00000028871.7|R-spondin homolog (Xenopus laevis)
mm10_v2_chr6_-_72899952_72899985	0.0284022	UGAAAUG	ENSMUST00000068697.8|Kcmf1|ENSMUSG00000055239.8|potassium channel modulatory factor 1
mm10_v2_chr8_-_124949165_124949372	0.0282103	UGAAAUG	ENSMUST00000034469.5|Egln1|ENSMUSG00000031987.5|EGL nine homolog 1 (C. elegans)
mm10_v2_chr16_-_17891593_17891700	0.0281875	UGAAAUG	ENSMUST00000117082.1|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000066127.6|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000117945.1|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000012152.6|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2
mm10_v2_chr9_+_44604844_44604921	0.0279193	UGAAAUG	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr5_-_67099235_67099255	0.0278554	UGAAAUG	ENSMUST00000012664.8|Phox2b|ENSMUSG00000012520.8|paired-like homeobox 2b
mm10_v2_chr12_+_105685352_105685430	0.0276992	UGAAAUG	ENSMUST00000051934.5|Gskip|ENSMUSG00000044715.6|GSK3B interacting protein
mm10_v2_chr19_+_11747548_11747581	0.027418	UGAAAUG	ENSMUST00000025585.3|Gif|ENSMUSG00000024682.3|gastric intrinsic factor
mm10_v2_chr12_+_52699297_52699411	0.0272776	UGAAAUG	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr18_+_32938955_32939041	0.0268656	UGAAAUG	ENSMUST00000042868.4|Camk4|ENSMUSG00000038128.6|calcium/calmodulin-dependent protein kinase IV
mm10_v2_chr12_+_3807017_3807063	0.0267973	UGAAAUG	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr12_+_51377560_51377587	0.0262569	UGAAAUG	ENSMUST00000021335.5|Scfd1|ENSMUSG00000020952.9|Sec1 family domain containing 1
mm10_v2_chr8_-_83332416_83332494	0.0260219	UGAAAUG	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chr12_-_3309912_3309975	0.025502	UGAAAUG	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr19_-_29805989_29806009	0.0252103	UGAAAUG	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr13_-_58610877_58610905	0.0250671	UGAAAUG	ENSMUST00000022036.7|Slc28a3|ENSMUSG00000021553.7|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3
mm10_v2_chr14_-_57746044_57746144	0.0248857	UGAAAUG	ENSMUST00000173990.1|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2 	ENSMUST00000022531.7|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2
mm10_v2_chr9_-_25151772_25151840	0.0247716	UGAAAUG	ENSMUST00000008573.7|Herpud2|ENSMUSG00000008429.7|HERPUD family member 2
mm10_v2_chr18_+_73573044_73573044	0.0245601	UGAAAUG	ENSMUST00000091852.4|Mex3c|ENSMUSG00000037253.8|mex3 homolog C (C. elegans)
mm10_v2_chr3_+_58576636_58576717	0.0244933	UGAAAUG	ENSMUST00000107924.1|Selt|ENSMUSG00000075700.9|selenoprotein T
mm10_v2_chr1_+_143640664_143640751	0.0240884	UGAAAUG	ENSMUST00000038252.2|B3galt2|ENSMUSG00000033849.2|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm10_v2_chr7_+_56050135_56050217	0.0237945	UGAAAUG	ENSMUST00000076226.6|Herc2|ENSMUSG00000030451.9|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm10_v2_chr12_+_78748947_78748971	0.0237877	UGAAAUG	ENSMUST00000082024.5|Mpp5|ENSMUSG00000021112.8|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm10_v2_chr4_+_136310952_136310984	0.0237111	UGAAAUG	ENSMUST00000105850.1|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R 	ENSMUST00000148843.3|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr9_-_70657121_70657188	0.0234892	UGAAAUG	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr13_-_104228833_104228849	0.023071	UGAAAUG	ENSMUST00000022226.4|Ppwd1|ENSMUSG00000021713.8|peptidylprolyl isomerase domain and WD repeat containing 1
mm10_v2_chr13_+_81711407_81711457	0.0230203	UGAAAUG	ENSMUST00000057598.5|Mblac2|ENSMUSG00000051098.5|metallo-beta-lactamase domain containing 2
mm10_v2_chr12_+_116485714_116485784	0.0225223	UGAAAUG	ENSMUST00000070733.7|Ptprn2|ENSMUSG00000056553.8|protein tyrosine phosphatase, receptor type, N polypeptide 2
mm10_v2_chr5_+_32458974_32459110	0.0224196	UGAAAUG	ENSMUST00000015100.8|Ppp1cb|ENSMUSG00000014956.9|protein phosphatase 1, catalytic subunit, beta isoform
mm10_v2_chr16_-_9994921_9995012	0.0215951	UGAAAUG	ENSMUST00000115835.1|Grin2a|ENSMUSG00000059003.6|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm10_v2_chr10_-_18743691_18743760	0.0214806	UGAAAUG	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr18_+_40258361_40258361	0.0212839	UGAAAUG	ENSMUST00000091927.4|Kctd16|ENSMUSG00000051401.6|potassium channel tetramerisation domain containing 16
mm10_v2_chr6_-_87590701_87590748	0.0212218	UGAAAUG	ENSMUST00000050887.7|Prokr1|ENSMUSG00000049409.7|prokineticin receptor 1
mm10_v2_chr11_+_97050594_97050630	0.0209481	UGAAAUG	ENSMUST00000090020.5|Osbpl7|ENSMUSG00000038534.11|oxysterol binding protein-like 7
mm10_v2_chr18_-_61911783_61911854	0.0209337	UGAAAUG	ENSMUST00000049378.8|Ablim3|ENSMUSG00000032735.8|actin binding LIM protein family, member 3 	ENSMUST00000166783.1|Ablim3|ENSMUSG00000032735.8|actin binding LIM protein family, member 3
mm10_v2_chr1_-_195131536_195131588	0.0208903	UGAAAUG	ENSMUST00000075451.6|Cr1l|ENSMUSG00000016481.10|complement component (3b/4b) receptor 1-like
mm10_v2_chr14_+_67716095_67716151	0.0207917	UGAAAUG	ENSMUST00000078053.6|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000145542.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000125212.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9
mm10_v2_chr13_-_70637634_70637825	0.0207593	UGAAAUG	ENSMUST00000043493.5|BC018507|ENSMUSG00000034525.6|cDNA sequence BC018507
mm10_v2_chr2_-_120970706_120970761	0.0207443	UGAAAUG	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr3_+_84666192_84666288	0.0207263	UGAAAUG	ENSMUST00000107682.1|Tmem154|ENSMUSG00000056498.7|transmembrane protein 154
mm10_v2_chr13_-_111808938_111809018	0.020684	UGAAAUG	ENSMUST00000109267.2|Map3k1|ENSMUSG00000021754.11|mitogen-activated protein kinase kinase kinase 1
mm10_v2_chr6_+_136954521_136954529	0.0205667	UGAAAUG	ENSMUST00000137768.1|Pde6h|ENSMUSG00000064330.7|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm10_v2_chr10_+_61680302_61680361	0.0204174	UGAAAUG	ENSMUST00000020285.8|Sar1a|ENSMUSG00000020088.9|SAR1 gene homolog A (S. cerevisiae)
mm10_v2_chr2_-_60963192_60963251	0.0200025	UGAAAUG	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr13_-_105054895_105054930	0.0198989	UGAAAUG	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr10_-_95416850_95416861	0.0196564	UGAAAUG	ENSMUST00000020215.9|Socs2|ENSMUSG00000020027.12|suppressor of cytokine signaling 2
mm10_v2_chr19_+_8819401_8819401	0.0189362	UGAAAUG	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr14_-_21052420_21052450	0.0187681	UGAAAUG	ENSMUST00000154460.1|Ap3m1|ENSMUSG00000021824.6|adaptor-related protein complex 3, mu 1 subunit
mm10_v2_chr8_+_90828820_90828842	0.0187596	UGAAAUG	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr6_-_38876163_38876234	0.0183216	UGAAAUG	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr6_+_92091378_92091390	0.0181689	UGAAAUG	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr17_+_57769570_57769570	0.0179732	UGAAAUG	ENSMUST00000076038.5|Cntnap5c|ENSMUSG00000038048.7|contactin associated protein-like 5C
mm10_v2_chr8_-_22593813_22593828	0.0179409	UGAAAUG	ENSMUST00000009036.3|Vdac3|ENSMUSG00000008892.5|voltage-dependent anion channel 3 	ENSMUST00000179233.1|Vdac3|ENSMUSG00000008892.5|voltage-dependent anion channel 3
mm10_v2_chr8_-_34965631_34965714	0.0178604	UGAAAUG	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr3_-_95217690_95217728	0.0178028	UGAAAUG	ENSMUST00000107209.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr11_+_95712673_95712673	0.0177662	UGAAAUG	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr11_+_74649462_74649520	0.017643	UGAAAUG	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr5_+_75152274_75152297	0.0170263	UGAAAUG	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr4_-_129742275_129742312	0.0168032	UGAAAUG	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr8_-_11008458_11008458	0.0167599	UGAAAUG	ENSMUST00000040514.6|Irs2|ENSMUSG00000038894.6|insulin receptor substrate 2
mm10_v2_chr19_-_47692042_47692094	0.0164904	UGAAAUG	ENSMUST00000026045.7|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1 	ENSMUST00000086923.5|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1
mm10_v2_chr13_-_98891036_98891063	0.0161639	UGAAAUG	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr4_+_116557658_116557724	0.0161096	UGAAAUG	ENSMUST00000030460.8|Gpbp1l1|ENSMUSG00000034042.10|GC-rich promoter binding protein 1-like 1
mm10_v2_chr9_-_90114812_90114821	0.0155071	UGAAAUG	ENSMUST00000085248.5|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1 	ENSMUST00000169860.1|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1
mm10_v2_chr2_+_37776229_37776258	0.0151579	UGAAAUG	ENSMUST00000050372.7|Crb2|ENSMUSG00000035403.8|crumbs homolog 2 (Drosophila)
mm10_v2_chr19_+_31868754_31868787	0.015034	UGAAAUG	ENSMUST00000075838.5|A1cf|ENSMUSG00000052595.6|APOBEC1 complementation factor
mm10_v2_chr6_-_97148908_97148930	0.0148624	UGAAAUG	ENSMUST00000142116.1|Eogt|ENSMUSG00000035245.6|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 	ENSMUST00000113387.1|Eogt|ENSMUSG00000035245.6|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
mm10_v2_chr5_+_122850186_122850198	0.0145937	UGAAAUG	ENSMUST00000031434.6|Rnf34|ENSMUSG00000029474.6|ring finger protein 34
mm10_v2_chr4_-_135573623_135573643	0.01455	UGAAAUG	ENSMUST00000105855.1|Grhl3|ENSMUSG00000037188.7|grainyhead-like 3 (Drosophila)
mm10_v2_chr14_-_57890242_57890320	0.0144213	UGAAAUG	ENSMUST00000089473.3|Zdhhc20|ENSMUSG00000021969.7|zinc finger, DHHC domain containing 20
mm10_v2_chr1_-_170867761_170867784	0.0143611	UGAAAUG	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr10_-_31609184_31609184	0.0141855	UGAAAUG	ENSMUST00000081989.6|Rnf217|ENSMUSG00000063760.8|ring finger protein 217
mm10_v2_chr6_-_92706145_92706234	0.014185	UGAAAUG	ENSMUST00000032093.5|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr7_+_122067164_122067216	0.0140075	UGAAAUG	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr5_+_30155243_30155311	0.0138031	UGAAAUG	ENSMUST00000026841.8|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000123980.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000114786.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr14_+_120478443_120478510	0.0137648	UGAAAUG	ENSMUST00000062117.6|Rap2a|ENSMUSG00000051615.7|RAS related protein 2a
mm10_v2_chr13_+_75707484_75707510	0.0137531	UGAAAUG	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr9_-_77045788_77045824	0.0137077	UGAAAUG	ENSMUST00000034911.6|Tinag|ENSMUSG00000032357.6|tubulointerstitial nephritis antigen
mm10_v2_chr7_-_35754394_35754454	0.013676	UGAAAUG	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr17_-_12992188_12992226	0.0135862	UGAAAUG	ENSMUST00000159986.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein
mm10_v2_chr9_-_44234014_44234046	0.0135708	UGAAAUG	ENSMUST00000037644.6|Cbl|ENSMUSG00000034342.8|Casitas B-lineage lymphoma
mm10_v2_chrX_+_38316177_38316193	0.0131236	UGAAAUG	ENSMUST00000016471.2|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide 	ENSMUST00000115134.1|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm10_v2_chr14_-_21989475_21989601	0.0130571	UGAAAUG	ENSMUST00000043409.7|Zfp503|ENSMUSG00000039081.9|zinc finger protein 503
mm10_v2_chr18_+_64887690_64887762	0.0124103	UGAAAUG	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr10_-_34019561_34019626	0.0123827	UGAAAUG	ENSMUST00000019917.5|Rwdd1|ENSMUSG00000019782.9|RWD domain containing 1
mm10_v2_chr11_+_85311232_85311286	0.0123707	UGAAAUG	ENSMUST00000020835.9|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr4_-_108301045_108301107	0.0121395	UGAAAUG	ENSMUST00000043616.6|Zyg11b|ENSMUSG00000034636.9|zyg-ll family member B, cell cycle regulator
mm10_v2_chr5_+_115506668_115506808	0.0117794	UGAAAUG	ENSMUST00000067268.8|Pxn|ENSMUSG00000029528.11|paxillin 	ENSMUST00000086523.3|Pxn|ENSMUSG00000029528.11|paxillin
mm10_v2_chr11_-_113684155_113684186	0.0117481	UGAAAUG	ENSMUST00000120194.1|Fam104a|ENSMUSG00000041629.7|family with sequence similarity 104, member A
mm10_v2_chr12_+_78226627_78226655	0.0117217	UGAAAUG	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr13_-_9764371_9764423	0.0116848	UGAAAUG	ENSMUST00000146059.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110637.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr7_+_123123870_123123901	0.0116424	UGAAAUG	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr1_+_181352618_181352641	0.0115484	UGAAAUG	ENSMUST00000161880.1|Cnih3|ENSMUSG00000026514.7|cornichon homolog 3 (Drosophila) 	ENSMUST00000027795.7|Cnih3|ENSMUSG00000026514.7|cornichon homolog 3 (Drosophila)
mm10_v2_chr1_+_180726019_180726106	0.0111393	UGAAAUG	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr9_-_59486610_59486621	0.0110445	UGAAAUG	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr1_+_160978576_160978606	0.0109757	UGAAAUG	ENSMUST00000064725.5|Serpinc1|ENSMUSG00000026715.7|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm10_v2_chr13_+_43398375_43398402	0.0108885	UGAAAUG	ENSMUST00000071926.3|Nol7|ENSMUSG00000063200.3|nucleolar protein 7
mm10_v2_chr17_+_4994904_4995074	0.0108774	UGAAAUG	ENSMUST00000092723.4|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like) 	ENSMUST00000115797.2|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like)
mm10_v2_chr1_-_166309585_166309585	0.0108584	UGAAAUG	ENSMUST00000168347.1|5330438I03Rik|ENSMUSG00000091393.1|RIKEN cDNA 5330438I03 gene
mm10_v2_chr11_-_119040905_119040969	0.0107496	UGAAAUG	ENSMUST00000026663.7|Cbx8|ENSMUSG00000025578.9|chromobox 8
mm10_v2_chr2_+_173659760_173659816	0.010681	UGAAAUG	ENSMUST00000029024.3|Rab22a|ENSMUSG00000027519.4|RAB22A, member RAS oncogene family
mm10_v2_chr15_+_88862178_88862193	0.010504	UGAAAUG	ENSMUST00000042818.9|Pim3|ENSMUSG00000035828.10|proviral integration site 3
mm10_v2_chr1_-_30949756_30949770	0.0103268	UGAAAUG	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr2_+_118901428_118901488	0.0102851	UGAAAUG	ENSMUST00000036578.6|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr3_-_95015214_95015246	0.0102107	UGAAAUG	ENSMUST00000128438.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000149747.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000019482.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr11_+_75679259_75679327	0.0101774	UGAAAUG	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr11_-_53423123_53423170	0.0100461	UGAAAUG	ENSMUST00000036045.5|Leap2|ENSMUSG00000036216.5|liver-expressed antimicrobial peptide 2
mm10_v2_chr6_+_126939957_126939988	0.00962801	UGAAAUG	ENSMUST00000032497.3|D6Wsu163e|ENSMUSG00000030347.3|DNA segment, Chr 6, Wayne State University 163, expressed
mm10_v2_chr16_+_11066292_11066381	0.00959812	UGAAAUG	ENSMUST00000089011.4|Snn|ENSMUSG00000037972.6|stannin
mm10_v2_chr5_-_104021919_104021945	0.00942482	UGAAAUG	ENSMUST00000031251.9|Hsd17b11|ENSMUSG00000029311.10|hydroxysteroid (17-beta) dehydrogenase 11
mm10_v2_chr11_+_96133786_96133786	0.00937649	UGAAAUG	ENSMUST00000167258.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr15_-_103239812_103239888	0.00916122	UGAAAUG	ENSMUST00000118152.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr4_-_94603239_94603253	0.00902284	UGAAAUG	ENSMUST00000107107.2|Plaa|ENSMUSG00000028577.7|phospholipase A2, activating protein
mm10_v2_chr6_-_6882068_6882092	0.00875098	UGAAAUG	ENSMUST00000142635.1|Dlx5|ENSMUSG00000029755.9|distal-less homeobox 5 	ENSMUST00000052609.8|Dlx5|ENSMUSG00000029755.9|distal-less homeobox 5
mm10_v2_chr16_-_97962581_97962636	0.00851768	UGAAAUG	ENSMUST00000113734.2|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21 	ENSMUST00000052089.7|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21 	ENSMUST00000063605.7|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21
mm10_v2_chr13_-_8871696_8871749	0.00851617	UGAAAUG	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr1_-_136960427_136960494	0.00848967	UGAAAUG	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chr8_-_60983215_60983319	0.00848355	UGAAAUG	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr4_-_121098190_121098250	0.008477	UGAAAUG	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr5_+_108268897_108268924	0.00826665	UGAAAUG	ENSMUST00000031190.4|Dr1|ENSMUSG00000029265.4|down-regulator of transcription 1
mm10_v2_chr15_+_80711292_80711340	0.00815803	UGAAAUG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr2_-_84650714_84650749	0.00813268	UGAAAUG	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr18_-_72351029_72351073	0.0079972	UGAAAUG	ENSMUST00000114943.3|Dcc|ENSMUSG00000060534.9|deleted in colorectal carcinoma
mm10_v2_chr15_+_101174096_101174148	0.00773578	UGAAAUG	ENSMUST00000000544.9|Acvr1b|ENSMUSG00000000532.9|activin A receptor, type 1B
mm10_v2_chr10_-_121586730_121586803	0.00745735	UGAAAUG	ENSMUST00000020316.2|Tbk1|ENSMUSG00000020115.2|TANK-binding kinase 1
mm10_v2_chr5_-_73338580_73338640	0.00732516	UGAAAUG	ENSMUST00000087195.5|Ociad2|ENSMUSG00000029153.8|OCIA domain containing 2
mm10_v2_chr16_-_22265950_22266005	0.00696995	UGAAAUG	ENSMUST00000161286.1|Tra2b|ENSMUSG00000022858.9|transformer 2 beta homolog (Drosophila)
mm10_v2_chr19_+_46761578_46761618	0.00675713	UGAAAUG	ENSMUST00000077666.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2 	ENSMUST00000099373.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2
mm10_v2_chr4_-_135353164_135353321	0.00665939	UGAAAUG	ENSMUST00000084846.5|Srrm1|ENSMUSG00000028809.10|serine/arginine repetitive matrix 1 	ENSMUST00000136342.2|Srrm1|ENSMUSG00000028809.10|serine/arginine repetitive matrix 1 	ENSMUST00000105861.1|Srrm1|ENSMUSG00000028809.10|serine/arginine repetitive matrix 1
mm10_v2_chr7_+_80993658_80993698	0.00657826	UGAAAUG	ENSMUST00000107353.2|Zfp592|ENSMUSG00000005621.11|zinc finger protein 592
mm10_v2_chr12_+_73901370_73901391	0.00639308	UGAAAUG	ENSMUST00000110461.1|Hif1a|ENSMUSG00000021109.7|hypoxia inducible factor 1, alpha subunit
mm10_v2_chr7_-_128461630_128461672	0.00635414	UGAAAUG	ENSMUST00000106226.2|Tial1|ENSMUSG00000030846.9|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm10_v2_chr7_+_100706702_100706731	0.0062624	UGAAAUG	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr8_+_57320975_57320992	0.00598631	UGAAAUG	ENSMUST00000040104.3|Hand2|ENSMUSG00000038193.3|heart and neural crest derivatives expressed transcript 2
mm10_v2_chr5_-_102069905_102069940	0.00571117	UGAAAUG	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr5_-_144965793_144965877	0.00535479	UGAAAUG	ENSMUST00000110677.1|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000085684.4|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000100461.2|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1
mm10_v2_chr2_-_153241402_153241426	0.00508357	UGAAAUG	ENSMUST00000056924.7|Plagl2|ENSMUSG00000051413.11|pleiomorphic adenoma gene-like 2
mm10_v2_chr15_-_94589870_94589889	0.00488381	UGAAAUG	ENSMUST00000023087.6|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila) 	ENSMUST00000152590.1|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm10_v2_chr16_-_64786321_64786321	0.00462588	UGAAAUG	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr15_-_13173607_13173644	0.00445319	UGAAAUG	ENSMUST00000036439.4|Cdh6|ENSMUSG00000039385.4|cadherin 6
mm10_v2_chrX_+_13280970_13281031	0.00433575	UGAAAUG	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr6_+_72598475_72598628	0.00428455	UGAAAUG	ENSMUST00000070597.6|Retsat|ENSMUSG00000056666.7|retinol saturase (all trans retinol 13,14 reductase) 	ENSMUST00000176364.1|Retsat|ENSMUSG00000056666.7|retinol saturase (all trans retinol 13,14 reductase) 	ENSMUST00000176168.1|Retsat|ENSMUSG00000056666.7|retinol saturase (all trans retinol 13,14 reductase)
mm10_v2_chr4_+_124802543_124802678	0.00411838	UGAAAUG	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr1_-_52233211_52233232	0.00407415	UGAAAUG	ENSMUST00000114513.2|Gls|ENSMUSG00000026103.8|glutaminase 	ENSMUST00000114510.1|Gls|ENSMUSG00000026103.8|glutaminase
mm10_v2_chr9_-_14751987_14752122	0.00404516	UGAAAUG	ENSMUST00000061498.5|Fut4|ENSMUSG00000049307.5|fucosyltransferase 4
mm10_v2_chr5_-_98030727_98030765	0.00385941	UGAAAUG	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr1_-_60566708_60566769	0.00351732	UGAAAUG	ENSMUST00000027168.5|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000090293.4|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000140485.1|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm10_v2_chr2_+_74711911_74711939	0.0027245	UGAAAUG	ENSMUST00000111983.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr18_+_38250240_38250287	0.00236326	UGAAAUG	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr14_-_16575456_16575501	0.00219852	UGAAAUG	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr1_-_64956807_64956824	0.00215765	UGAAAUG	ENSMUST00000097713.1|Plekhm3|ENSMUSG00000051344.7|pleckstrin homology domain containing, family M, member 3
mm10_v2_chr17_-_65613521_65613555	0.00214791	UGAAAUG	ENSMUST00000024897.8|Vapa|ENSMUSG00000024091.8|vesicle-associated membrane protein, associated protein A
mm10_v2_chr2_-_103797617_103797662	0.00211095	UGAAAUG	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr19_-_12796108_12796146	0.00197827	UGAAAUG	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr5_-_25100624_25100657	0.00195998	UGAAAUG	ENSMUST00000030784.7|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr6_-_129451906_129452000	0.00188169	UGAAAUG	ENSMUST00000037481.7|Clec1a|ENSMUSG00000033082.8|C-type lectin domain family 1, member a
mm10_v2_chr4_+_106911470_106911511	0.00187779	UGAAAUG	ENSMUST00000030367.8|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3 	ENSMUST00000149926.1|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3
mm10_v2_chr14_+_121035538_121035575	0.00164797	UGAAAUG	ENSMUST00000026635.7|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr5_-_137314175_137314241	0.00150859	UGAAAUG	ENSMUST00000024119.9|Trip6|ENSMUSG00000023348.10|thyroid hormone receptor interactor 6
mm10_v2_chr12_+_95692212_95692246	0.0014292	UGAAAUG	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr15_-_38078842_38078860	0.00130979	UGAAAUG	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr19_+_32757497_32757587	0.00122083	UGAAAUG	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr8_+_22859528_22859554	0.00116772	UGAAAUG	ENSMUST00000110696.1|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A 	ENSMUST00000044331.6|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A
mm10_v2_chr16_-_50432340_50432409	0.00111187	UGAAAUG	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chrX_-_133688978_133689005	0.00106461	UGAAAUG	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr1_+_33719863_33719901	0.00106194	UGAAAUG	ENSMUST00000088287.3|Rab23|ENSMUSG00000004768.8|RAB23, member RAS oncogene family
mm10_v2_chr2_+_104122738_104122774	0.000800169	UGAAAUG	ENSMUST00000040374.5|A930018P22Rik|ENSMUSG00000032671.5|RIKEN cDNA A930018P22 gene
mm10_v2_chr3_+_16183177_16183206	0.000737011	UGAAAUG	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr10_+_98915117_98915172	0.000580361	UGAAAUG	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr7_+_59228743_59228769	0.000449369	UGAAAUG	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr5_+_115341225_115341270	0.000392292	UGAAAUG	ENSMUST00000031508.4|Triap1|ENSMUSG00000029535.4|TP53 regulated inhibitor of apoptosis 1
mm10_v2_chr11_+_93996082_93996103	0.000274852	UGAAAUG	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr18_-_54990124_54990180	0.00021218	UGAAAUG	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr16_+_95702044_95702094	0.000188258	UGAAAUG	ENSMUST00000023612.8|Ets2|ENSMUSG00000022895.8|E26 avian leukemia oncogene 2, 3' domain
mm10_v2_chr4_+_34550937_34550937	0.000186177	UGAAAUG	ENSMUST00000084299.5|Akirin2|ENSMUSG00000028291.7|akirin 2
mm10_v2_chr5_+_111330742_111330768	0.000144479	UGAAAUG	ENSMUST00000086635.4|Pitpnb|ENSMUSG00000050017.7|phosphatidylinositol transfer protein, beta
mm10_v2_chr17_+_85613432_85613608	8.445e-05	UGAAAUG	ENSMUST00000176081.1|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chr7_+_98703091_98703137	3.90814e-05	UGAAAUG	ENSMUST00000033009.9|Prkrir|ENSMUSG00000030753.9|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
