mm10_v2_chr4_+_104766308_104766331	0.123185	UGCAUUG	ENSMUST00000031663.3|C8b|ENSMUSG00000029656.7|complement component 8, beta polypeptide
mm10_v2_chr5_+_13399309_13399382	0.0674638	UGCAUUG	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr17_-_91092715_91092822	0.0657251	UGCAUUG	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr5_-_8997324_8997324	0.0645269	UGCAUUG	ENSMUST00000003720.4|Crot|ENSMUSG00000003623.4|carnitine O-octanoyltransferase
mm10_v2_chr4_-_134018829_134018841	0.0567454	UGCAUUG	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr9_+_74861888_74861921	0.0547386	UGCAUUG	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr4_-_53159885_53159900	0.0542086	UGCAUUG	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr5_+_104435112_104435158	0.0541717	UGCAUUG	ENSMUST00000031243.8|Spp1|ENSMUSG00000029304.8|secreted phosphoprotein 1 	ENSMUST00000086833.6|Spp1|ENSMUSG00000029304.8|secreted phosphoprotein 1 	ENSMUST00000112748.1|Spp1|ENSMUSG00000029304.8|secreted phosphoprotein 1 	ENSMUST00000112746.1|Spp1|ENSMUSG00000029304.8|secreted phosphoprotein 1 	ENSMUST00000145084.1|Spp1|ENSMUSG00000029304.8|secreted phosphoprotein 1 	ENSMUST00000132457.1|Spp1|ENSMUSG00000029304.8|secreted phosphoprotein 1
mm10_v2_chr12_+_24831583_24831658	0.0525411	UGCAUUG	ENSMUST00000110942.3|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2 	ENSMUST00000078902.6|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2
mm10_v2_chr9_+_68653761_68653786	0.0523278	UGCAUUG	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr13_-_37050237_37050274	0.0466008	UGCAUUG	ENSMUST00000164727.1|F13a1|ENSMUSG00000039109.9|coagulation factor XIII, A1 subunit
mm10_v2_chr18_-_10610124_10610144	0.04126	UGCAUUG	ENSMUST00000097670.3|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr12_+_33957645_33957671	0.0407496	UGCAUUG	ENSMUST00000049089.5|Twist1|ENSMUSG00000035799.5|twist basic helix-loop-helix transcription factor 1
mm10_v2_chr10_-_110000219_110000219	0.0386292	UGCAUUG	ENSMUST00000032719.7|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr13_+_117602439_117602482	0.038564	UGCAUUG	ENSMUST00000006991.7|Hcn1|ENSMUSG00000021730.7|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm10_v2_chrX_+_159627265_159627298	0.0379802	UGCAUUG	ENSMUST00000112456.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr11_-_60220550_60220632	0.0370799	UGCAUUG	ENSMUST00000020846.1|Srebf1|ENSMUSG00000020538.9|sterol regulatory element binding transcription factor 1
mm10_v2_chr18_+_67933257_67933257	0.03703	UGCAUUG	ENSMUST00000063775.3|Ldlrad4|ENSMUSG00000024544.8|low density lipoprotein receptor class A domain containing 4
mm10_v2_chr8_+_34807287_34807310	0.0363647	UGCAUUG	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr4_+_138967112_138967127	0.0353558	UGCAUUG	ENSMUST00000116094.2|Rnf186|ENSMUSG00000070661.5|ring finger protein 186
mm10_v2_chr3_+_96727611_96727620	0.0344969	UGCAUUG	ENSMUST00000029740.9|Rnf115|ENSMUSG00000028098.9|ring finger protein 115
mm10_v2_chr5_+_110879788_110879842	0.0339815	UGCAUUG	ENSMUST00000156290.2|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28 	ENSMUST00000040111.9|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28
mm10_v2_chr1_-_124045523_124045571	0.0325223	UGCAUUG	ENSMUST00000112606.1|Dpp10|ENSMUSG00000036815.10|dipeptidylpeptidase 10
mm10_v2_chr3_-_85746266_85746266	0.0285205	UGCAUUG	ENSMUST00000118408.1|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr3_+_135825648_135825664	0.02686	UGCAUUG	ENSMUST00000180196.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chr4_-_59549314_59549364	0.0266179	UGCAUUG	ENSMUST00000148331.2|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000030076.5|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr9_-_43239816_43239842	0.0262485	UGCAUUG	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chr3_+_127633134_127633140	0.0260174	UGCAUUG	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr3_+_41555723_41555745	0.0251396	UGCAUUG	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr11_-_47379405_47379522	0.0246966	UGCAUUG	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr2_+_96318014_96318216	0.0235582	UGCAUUG	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr3_+_58415689_58415689	0.0232422	UGCAUUG	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr3_+_31902666_31902703	0.0230127	UGCAUUG	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr8_-_85299483_85299535	0.0217531	UGCAUUG	ENSMUST00000034131.8|Vps35|ENSMUSG00000031696.8|vacuolar protein sorting 35
mm10_v2_chr9_-_66919646_66919710	0.021584	UGCAUUG	ENSMUST00000041139.7|Rab8b|ENSMUSG00000036943.8|RAB8B, member RAS oncogene family
mm10_v2_chr3_-_125938537_125938605	0.0212206	UGCAUUG	ENSMUST00000057944.7|Ugt8a|ENSMUSG00000032854.8|UDP galactosyltransferase 8A
mm10_v2_chr19_+_38836561_38836612	0.021086	UGCAUUG	ENSMUST00000037302.5|Tbc1d12|ENSMUSG00000048720.7|TBC1D12: TBC1 domain family, member 12
mm10_v2_chr13_-_119408985_119409003	0.0209166	UGCAUUG	ENSMUST00000099149.3|Nnt|ENSMUSG00000025453.10|nicotinamide nucleotide transhydrogenase 	ENSMUST00000069902.6|Nnt|ENSMUSG00000025453.10|nicotinamide nucleotide transhydrogenase 	ENSMUST00000109204.1|Nnt|ENSMUSG00000025453.10|nicotinamide nucleotide transhydrogenase
mm10_v2_chr19_+_3323301_3323339	0.0200545	UGCAUUG	ENSMUST00000025835.4|Cpt1a|ENSMUSG00000024900.4|carnitine palmitoyltransferase 1a, liver
mm10_v2_chr17_-_64331817_64331957	0.018131	UGCAUUG	ENSMUST00000172733.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing 	ENSMUST00000172818.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing
mm10_v2_chr8_-_91313223_91313279	0.0179761	UGCAUUG	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chr18_+_75367529_75367561	0.0174457	UGCAUUG	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr1_+_136624901_136624949	0.0174105	UGCAUUG	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr4_+_84884276_84884314	0.0173564	UGCAUUG	ENSMUST00000047023.6|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr5_+_88720855_88720876	0.0172302	UGCAUUG	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr5_-_121452462_121452518	0.0172125	UGCAUUG	ENSMUST00000052590.7|Erp29|ENSMUSG00000029616.9|endoplasmic reticulum protein 29 	ENSMUST00000130451.1|Erp29|ENSMUSG00000029616.9|endoplasmic reticulum protein 29
mm10_v2_chr17_-_66077022_66077081	0.0171601	UGCAUUG	ENSMUST00000150766.1|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12 	ENSMUST00000038116.5|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12
mm10_v2_chr4_-_134287215_134287258	0.0167566	UGCAUUG	ENSMUST00000145006.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105877.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000127857.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105876.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like
mm10_v2_chr19_+_22448242_22448283	0.0166543	UGCAUUG	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr11_-_55607733_55607822	0.0162993	UGCAUUG	ENSMUST00000108853.1|Glra1|ENSMUSG00000000263.9|glycine receptor, alpha 1 subunit 	ENSMUST00000075603.4|Glra1|ENSMUSG00000000263.9|glycine receptor, alpha 1 subunit
mm10_v2_chr8_+_106935720_106935776	0.0158865	UGCAUUG	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr3_+_105452326_105452365	0.0150895	UGCAUUG	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr6_+_65671590_65671618	0.0149342	UGCAUUG	ENSMUST00000054351.4|Ndnf|ENSMUSG00000049001.4|neuron-derived neurotrophic factor
mm10_v2_chr15_+_40655020_40655054	0.0148061	UGCAUUG	ENSMUST00000053467.4|Zfpm2|ENSMUSG00000022306.8|zinc finger protein, multitype 2
mm10_v2_chr6_-_38876163_38876234	0.0147761	UGCAUUG	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr11_-_30025915_30026033	0.0146233	UGCAUUG	ENSMUST00000058902.5|Eml6|ENSMUSG00000044072.8|echinoderm microtubule associated protein like 6
mm10_v2_chr1_-_176275274_176275308	0.0145182	UGCAUUG	ENSMUST00000111166.1|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5 	ENSMUST00000065967.7|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5
mm10_v2_chr16_-_67620880_67620922	0.0136484	UGCAUUG	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr3_-_84304762_84304809	0.013076	UGCAUUG	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr19_+_38264761_38264831	0.0130161	UGCAUUG	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr12_+_10390756_10390836	0.0129569	UGCAUUG	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr7_+_123982799_123982869	0.0128549	UGCAUUG	ENSMUST00000106437.1|Hs3st4|ENSMUSG00000078591.1|heparan sulfate (glucosamine) 3-O-sulfotransferase 4
mm10_v2_chr3_-_116808166_116808198	0.0125068	UGCAUUG	ENSMUST00000040603.7|Agl|ENSMUSG00000033400.8|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm10_v2_chr1_+_118627943_118627951	0.0124124	UGCAUUG	ENSMUST00000027629.8|Tfcp2l1|ENSMUSG00000026380.9|transcription factor CP2-like 1
mm10_v2_chr16_-_74411292_74411430	0.0123714	UGCAUUG	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr3_+_157947414_157947510	0.012296	UGCAUUG	ENSMUST00000164582.1|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c 	ENSMUST00000040787.8|Ankrd13c|ENSMUSG00000039988.8|ankyrin repeat domain 13c
mm10_v2_chr4_-_155222535_155222592	0.0121051	UGCAUUG	ENSMUST00000084103.3|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian) 	ENSMUST00000030917.5|Ski|ENSMUSG00000029050.9|ski sarcoma viral oncogene homolog (avian)
mm10_v2_chrX_+_13280970_13281031	0.0120754	UGCAUUG	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr2_-_37647199_37647285	0.0119105	UGCAUUG	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr5_+_96997676_96997766	0.0118312	UGCAUUG	ENSMUST00000112974.1|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase 	ENSMUST00000035635.7|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase
mm10_v2_chr13_-_60177357_60177373	0.0113354	UGCAUUG	ENSMUST00000065086.4|Gas1|ENSMUSG00000052957.7|growth arrest specific 1
mm10_v2_chr4_+_124802543_124802678	0.0110916	UGCAUUG	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr17_-_10319324_10319380	0.0109501	UGCAUUG	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr1_+_191906743_191906767	0.0107098	UGCAUUG	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr1_-_164458345_164458363	0.0105186	UGCAUUG	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr11_-_106788486_106788532	0.0102353	UGCAUUG	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr6_+_105677768_105677794	0.0100254	UGCAUUG	ENSMUST00000089208.2|Cntn4|ENSMUSG00000064293.8|contactin 4
mm10_v2_chr8_-_34965631_34965714	0.00983546	UGCAUUG	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr9_+_25252439_25252516	0.00976496	UGCAUUG	ENSMUST00000115272.2|Sept7|ENSMUSG00000001833.10|septin 7 	ENSMUST00000165594.2|Sept7|ENSMUSG00000001833.10|septin 7
mm10_v2_chr17_+_26715644_26715724	0.00956849	UGCAUUG	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr6_+_38433913_38433965	0.00953919	UGCAUUG	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr14_-_124677089_124677127	0.00917937	UGCAUUG	ENSMUST00000095529.3|Fgf14|ENSMUSG00000025551.7|fibroblast growth factor 14
mm10_v2_chr6_-_149101674_149101686	0.00912051	UGCAUUG	ENSMUST00000111557.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr18_-_9450097_9450161	0.00879341	UGCAUUG	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr13_-_103920508_103920572	0.00874648	UGCAUUG	ENSMUST00000053927.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000091269.4|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000022222.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr1_-_77515048_77515102	0.00842354	UGCAUUG	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr14_-_61439831_61439947	0.00812433	UGCAUUG	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr1_-_56972437_56972502	0.00807113	UGCAUUG	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr9_+_62341329_62341390	0.00804604	UGCAUUG	ENSMUST00000085519.6|Anp32a|ENSMUSG00000032249.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm10_v2_chr7_+_110122299_110122350	0.00784473	UGCAUUG	ENSMUST00000033326.8|Wee1|ENSMUSG00000031016.8|WEE 1 homolog 1 (S. pombe)
mm10_v2_chr2_+_28205648_28205672	0.00781736	UGCAUUG	ENSMUST00000102879.3|Olfm1|ENSMUSG00000026833.12|olfactomedin 1 	ENSMUST00000028177.4|Olfm1|ENSMUSG00000026833.12|olfactomedin 1
mm10_v2_chr6_-_13677930_13677974	0.00779956	UGCAUUG	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr5_+_57718021_57718104	0.00776415	UGCAUUG	ENSMUST00000094783.3|Pcdh7|ENSMUSG00000029108.8|protocadherin 7 	ENSMUST00000068110.7|Pcdh7|ENSMUSG00000029108.8|protocadherin 7
mm10_v2_chr9_-_75409352_75409383	0.0076282	UGCAUUG	ENSMUST00000168937.1|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chr14_+_21499770_21499883	0.00706389	UGCAUUG	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr4_+_102760294_102760525	0.00699068	UGCAUUG	ENSMUST00000072481.5|Sgip1|ENSMUSG00000028524.15|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENSMUST00000156596.1|Sgip1|ENSMUSG00000028524.15|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENSMUST00000080728.6|Sgip1|ENSMUSG00000028524.15|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENSMUST00000106882.2|Sgip1|ENSMUSG00000028524.15|SH3-domain GRB2-like (endophilin) interacting protein 1
mm10_v2_chr6_-_28134545_28134545	0.00680747	UGCAUUG	ENSMUST00000115323.1|Grm8|ENSMUSG00000024211.9|glutamate receptor, metabotropic 8
mm10_v2_chr2_+_165992625_165992667	0.00679278	UGCAUUG	ENSMUST00000109252.1|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3 	ENSMUST00000088095.5|Ncoa3|ENSMUSG00000027678.11|nuclear receptor coactivator 3
mm10_v2_chr1_-_58586191_58586323	0.00629796	UGCAUUG	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr13_+_9093893_9093927	0.00618974	UGCAUUG	ENSMUST00000091829.2|Larp4b|ENSMUSG00000033499.7|La ribonucleoprotein domain family, member 4B
mm10_v2_chr18_-_64660981_64661010	0.00612487	UGCAUUG	ENSMUST00000025482.8|Atp8b1|ENSMUSG00000039529.8|ATPase, class I, type 8B, member 1
mm10_v2_chr10_-_67548944_67549001	0.00611188	UGCAUUG	ENSMUST00000075686.4|Ado|ENSMUSG00000057134.4|2-aminoethanethiol (cysteamine) dioxygenase
mm10_v2_chrX_-_103981242_103981287	0.00606124	UGCAUUG	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr13_-_107890059_107890073	0.0058447	UGCAUUG	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr3_-_107696462_107696574	0.00563631	UGCAUUG	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr9_-_52168111_52168111	0.0052154	UGCAUUG	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr11_+_31872100_31872226	0.00519253	UGCAUUG	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr17_+_29490812_29490839	0.00514456	UGCAUUG	ENSMUST00000024811.6|Pim1|ENSMUSG00000024014.6|proviral integration site 1
mm10_v2_chr9_+_65294260_65294341	0.00497234	UGCAUUG	ENSMUST00000015501.4|Clpx|ENSMUSG00000015357.4|caseinolytic peptidase X (E.coli) 	ENSMUST00000113824.1|Clpx|ENSMUSG00000015357.4|caseinolytic peptidase X (E.coli)
mm10_v2_chrX_+_75416628_75416649	0.00484565	UGCAUUG	ENSMUST00000033544.7|Brcc3|ENSMUSG00000031201.11|BRCA1/BRCA2-containing complex, subunit 3
mm10_v2_chr2_-_74578875_74578954	0.00474108	UGCAUUG	ENSMUST00000134168.1|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000111993.2|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000064503.6|Lnp|ENSMUSG00000009207.9|limb and neural patterns
mm10_v2_chr11_-_79530569_79530609	0.00461358	UGCAUUG	ENSMUST00000103236.3|Evi2a|ENSMUSG00000078771.4|ecotropic viral integration site 2a 	ENSMUST00000170422.2|Evi2b|ENSMUSG00000093938.1|ecotropic viral integration site 2b 	ENSMUST00000170799.1|Evi2a|ENSMUSG00000078771.4|ecotropic viral integration site 2a
mm10_v2_chr4_-_14621805_14621819	0.00452643	UGCAUUG	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr10_-_120476469_120476527	0.00439495	UGCAUUG	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr14_-_12823031_12823133	0.00403823	UGCAUUG	ENSMUST00000067491.6|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000177814.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112658.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112657.2|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator
mm10_v2_chr15_+_39198244_39198363	0.00394195	UGCAUUG	ENSMUST00000082054.5|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2 	ENSMUST00000042917.9|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2
mm10_v2_chr2_+_76406529_76406580	0.00391743	UGCAUUG	ENSMUST00000111929.1|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000077972.4|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000111930.2|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6
mm10_v2_chr5_+_43233463_43233491	0.00359907	UGCAUUG	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr13_-_96670838_96670936	0.00334981	UGCAUUG	ENSMUST00000022176.8|Hmgcr|ENSMUSG00000021670.8|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm10_v2_chr10_-_13324160_13324242	0.00320876	UGCAUUG	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr5_+_34573664_34573737	0.00309107	UGCAUUG	ENSMUST00000114338.2|Add1|ENSMUSG00000029106.8|adducin 1 (alpha)
mm10_v2_chr3_-_101110278_101110294	0.00294276	UGCAUUG	ENSMUST00000102694.3|Ptgfrn|ENSMUSG00000027864.8|prostaglandin F2 receptor negative regulator
mm10_v2_chr15_+_88862178_88862193	0.00289028	UGCAUUG	ENSMUST00000042818.9|Pim3|ENSMUSG00000035828.10|proviral integration site 3
mm10_v2_chr3_-_69127098_69127113	0.00284263	UGCAUUG	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr10_+_80494835_80494873	0.00282895	UGCAUUG	ENSMUST00000051773.8|Onecut3|ENSMUSG00000045518.8|one cut domain, family member 3
mm10_v2_chr9_-_90114812_90114821	0.002769	UGCAUUG	ENSMUST00000085248.5|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1 	ENSMUST00000169860.1|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1
mm10_v2_chr4_-_120825665_120825707	0.0026363	UGCAUUG	ENSMUST00000134979.1|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma 	ENSMUST00000136236.1|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma 	ENSMUST00000043429.5|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma 	ENSMUST00000145658.1|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma
mm10_v2_chr2_+_90847149_90847160	0.00241067	UGCAUUG	ENSMUST00000136872.1|Mtch2|ENSMUSG00000027282.11|mitochondrial carrier homolog 2 (C. elegans)
mm10_v2_chr11_-_85139939_85140038	0.00238262	UGCAUUG	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr1_-_13372434_13372457	0.00231069	UGCAUUG	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr3_+_146852359_146852438	0.00210183	UGCAUUG	ENSMUST00000038090.5|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7 	ENSMUST00000170055.1|Ttll7|ENSMUSG00000036745.9|tubulin tyrosine ligase-like family, member 7
mm10_v2_chr15_-_82016134_82016170	0.00198693	UGCAUUG	ENSMUST00000152227.1|Desi1|ENSMUSG00000022472.10|desumoylating isopeptidase 1
mm10_v2_chr3_-_116253467_116253484	0.00196574	UGCAUUG	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr9_+_53537021_53537074	0.00190873	UGCAUUG	ENSMUST00000035850.7|Npat|ENSMUSG00000033054.7|nuclear protein in the AT region
mm10_v2_chr2_-_154892887_154892935	0.00189561	UGCAUUG	ENSMUST00000099173.4|Eif2s2|ENSMUSG00000074656.6|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm10_v2_chr2_-_101649501_101649539	0.00149689	UGCAUUG	ENSMUST00000078494.5|Rag1|ENSMUSG00000061311.6|recombination activating gene 1 	ENSMUST00000160722.1|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene 	ENSMUST00000160037.1|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene
mm10_v2_chrX_-_108834303_108834381	0.00125347	UGCAUUG	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr10_-_5922385_5922407	0.00082977	UGCAUUG	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr6_-_92183972_92184038	0.000810817	UGCAUUG	ENSMUST00000140438.1|Mrps25|ENSMUSG00000014551.8|mitochondrial ribosomal protein S25
mm10_v2_chr2_-_48949206_48949276	0.000610516	UGCAUUG	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr5_-_89883321_89883343	0.000584065	UGCAUUG	ENSMUST00000163159.1|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 	ENSMUST00000061427.5|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm10_v2_chr16_+_94085226_94085260	0.000314985	UGCAUUG	ENSMUST00000072182.7|Sim2|ENSMUSG00000062713.7|single-minded homolog 2 (Drosophila)
mm10_v2_chr5_+_30155243_30155311	0.00018661	UGCAUUG	ENSMUST00000026841.8|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000123980.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000114786.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr5_-_102069905_102069940	0.000183711	UGCAUUG	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr17_+_29032664_29032681	0.000107472	UGCAUUG	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
