mm10_v2_chrX_-_104201126_104201185	0.523936	UUGGCAC	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr11_-_96005872_96005952	0.433341	UUGGCAC	ENSMUST00000013559.2|Igf2bp1|ENSMUSG00000013415.3|insulin-like growth factor 2 mRNA binding protein 1
mm10_v2_chr9_-_114564315_114564369	0.411063	UUGGCAC	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr19_+_28835074_28835116	0.394712	UUGGCAC	ENSMUST00000025875.4|Slc1a1|ENSMUSG00000024935.4|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm10_v2_chr5_+_33995984_33996030	0.370523	UUGGCAC	ENSMUST00000056355.8|Nat8l|ENSMUSG00000048142.8|N-acetyltransferase 8-like
mm10_v2_chr4_-_91372028_91372069	0.356389	UUGGCAC	ENSMUST00000107110.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000008633.8|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107118.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr3_+_102010138_102010171	0.338293	UUGGCAC	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr9_+_72806874_72806874	0.324735	UUGGCAC	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr6_+_119236507_119236532	0.32154	UUGGCAC	ENSMUST00000037434.6|Cacna2d4|ENSMUSG00000041460.8|calcium channel, voltage-dependent, alpha 2/delta subunit 4
mm10_v2_chr5_-_135251209_135251242	0.320535	UUGGCAC	ENSMUST00000062572.2|Fzd9|ENSMUSG00000049551.2|frizzled homolog 9 (Drosophila)
mm10_v2_chr13_-_96132568_96132628	0.313185	UUGGCAC	ENSMUST00000161263.1|Sv2c|ENSMUSG00000051111.9|synaptic vesicle glycoprotein 2c
mm10_v2_chr16_-_63864114_63864182	0.308553	UUGGCAC	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr11_-_119547744_119547759	0.301627	UUGGCAC	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr2_-_31845925_31846005	0.301054	UUGGCAC	ENSMUST00000028188.7|Fibcd1|ENSMUSG00000026841.7|fibrinogen C domain containing 1
mm10_v2_chr10_+_127000709_127000747	0.298726	UUGGCAC	ENSMUST00000026500.5|Avil|ENSMUSG00000025432.5|advillin 	ENSMUST00000142698.1|Avil|ENSMUSG00000025432.5|advillin
mm10_v2_chr18_+_22345089_22345089	0.291605	UUGGCAC	ENSMUST00000120223.1|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila) 	ENSMUST00000097655.3|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila)
mm10_v2_chr3_+_145758674_145758685	0.287453	UUGGCAC	ENSMUST00000029845.8|Ddah1|ENSMUSG00000028194.9|dimethylarginine dimethylaminohydrolase 1
mm10_v2_chr1_-_105356658_105356714	0.278718	UUGGCAC	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr8_+_14095849_14095915	0.276542	UUGGCAC	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr5_+_30711564_30711586	0.275584	UUGGCAC	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr5_+_144545883_144545889	0.267315	UUGGCAC	ENSMUST00000071782.6|Nptx2|ENSMUSG00000059991.6|neuronal pentraxin 2
mm10_v2_chr1_+_158362261_158362304	0.25622	UUGGCAC	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr9_+_65141154_65141198	0.249259	UUGGCAC	ENSMUST00000034961.4|Igdcc3|ENSMUSG00000032394.5|immunoglobulin superfamily, DCC subclass, member 3
mm10_v2_chr14_+_34819811_34819834	0.245778	UUGGCAC	ENSMUST00000043349.5|Grid1|ENSMUSG00000041078.6|glutamate receptor, ionotropic, delta 1
mm10_v2_chr17_+_84511832_84511913	0.239097	UUGGCAC	ENSMUST00000047206.5|Plekhh2|ENSMUSG00000040852.5|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm10_v2_chr15_-_43869993_43870058	0.236139	UUGGCAC	ENSMUST00000067469.4|Tmem74|ENSMUSG00000054409.4|transmembrane protein 74
mm10_v2_chr18_+_40258361_40258361	0.23594	UUGGCAC	ENSMUST00000091927.4|Kctd16|ENSMUSG00000051401.6|potassium channel tetramerisation domain containing 16
mm10_v2_chr3_-_86548268_86548290	0.233155	UUGGCAC	ENSMUST00000077524.3|Mab21l2|ENSMUSG00000057777.3|mab-21-like 2 (C. elegans)
mm10_v2_chr8_+_117157972_117158137	0.228404	UUGGCAC	ENSMUST00000064488.4|Gan|ENSMUSG00000052557.5|giant axonal neuropathy 	ENSMUST00000162997.1|Gan|ENSMUSG00000052557.5|giant axonal neuropathy
mm10_v2_chr7_+_141475240_141475256	0.222422	UUGGCAC	ENSMUST00000026585.7|Tspan4|ENSMUSG00000025511.8|tetraspanin 4
mm10_v2_chr7_+_18925863_18925899	0.206371	UUGGCAC	ENSMUST00000172835.1|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2 	ENSMUST00000032571.8|Nova2|ENSMUSG00000030411.9|neuro-oncological ventral antigen 2
mm10_v2_chr18_-_47368830_47368878	0.204497	UUGGCAC	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr9_-_70141484_70141578	0.203305	UUGGCAC	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr2_+_102658640_102658669	0.201064	UUGGCAC	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr11_-_87108656_87108719	0.199003	UUGGCAC	ENSMUST00000051395.8|Prr11|ENSMUSG00000020493.8|proline rich 11
mm10_v2_chr6_-_113501818_113501949	0.197771	UUGGCAC	ENSMUST00000101059.1|Prrt3|ENSMUSG00000045009.7|proline-rich transmembrane protein 3
mm10_v2_chr5_-_140649018_140649052	0.1923	UUGGCAC	ENSMUST00000042661.3|Ttyh3|ENSMUSG00000036565.3|tweety homolog 3 (Drosophila)
mm10_v2_chr16_+_7069825_7069846	0.189768	UUGGCAC	ENSMUST00000056416.7|Rbfox1|ENSMUSG00000008658.9|RNA binding protein, fox-1 homolog (C. elegans) 1
mm10_v2_chrX_-_111463043_111463081	0.188847	UUGGCAC	ENSMUST00000065976.5|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr6_+_71707561_71707561	0.186819	UUGGCAC	ENSMUST00000121469.1|Reep1|ENSMUSG00000052852.7|receptor accessory protein 1
mm10_v2_chr2_-_157079212_157079276	0.186389	UUGGCAC	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr18_+_5591860_5591902	0.185696	UUGGCAC	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr13_-_36734450_36734492	0.182926	UUGGCAC	ENSMUST00000037623.8|Nrn1|ENSMUSG00000039114.9|neuritin 1
mm10_v2_chr11_-_84525514_84525542	0.176899	UUGGCAC	ENSMUST00000018842.7|Lhx1|ENSMUSG00000018698.9|LIM homeobox protein 1
mm10_v2_chr2_-_32083783_32083796	0.171739	UUGGCAC	ENSMUST00000056406.6|Fam78a|ENSMUSG00000050592.8|family with sequence similarity 78, member A
mm10_v2_chr4_+_106561027_106561038	0.169235	UUGGCAC	ENSMUST00000047973.3|Dhcr24|ENSMUSG00000034926.3|24-dehydrocholesterol reductase
mm10_v2_chr11_-_12464804_12464845	0.168079	UUGGCAC	ENSMUST00000172919.1|Cobl|ENSMUSG00000020173.11|cordon-bleu WH2 repeat
mm10_v2_chr7_-_116237767_116237781	0.163128	UUGGCAC	ENSMUST00000182834.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr13_-_110280103_110280213	0.162733	UUGGCAC	ENSMUST00000167824.1|Rab3c|ENSMUSG00000021700.9|RAB3C, member RAS oncogene family
mm10_v2_chr10_-_127263346_127263368	0.161883	UUGGCAC	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr3_-_108415552_108415552	0.156394	UUGGCAC	ENSMUST00000090558.3|Celsr2|ENSMUSG00000068740.7|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm10_v2_chr14_+_27238018_27238046	0.15578	UUGGCAC	ENSMUST00000049206.5|Arhgef3|ENSMUSG00000021895.9|Rho guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr10_+_13090788_13090843	0.155428	UUGGCAC	ENSMUST00000121646.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1 	ENSMUST00000121325.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1 	ENSMUST00000121766.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1
mm10_v2_chr19_+_60755947_60755987	0.15375	UUGGCAC	ENSMUST00000088237.4|Nanos1|ENSMUSG00000072437.3|nanos homolog 1 (Drosophila)
mm10_v2_chr4_+_108460000_108460030	0.15334	UUGGCAC	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr10_-_68278713_68278735	0.152571	UUGGCAC	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr11_+_46055973_46056068	0.151935	UUGGCAC	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr11_+_77216180_77216287	0.150375	UUGGCAC	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr2_+_92599671_92599724	0.148388	UUGGCAC	ENSMUST00000065797.6|Chst1|ENSMUSG00000027221.5|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
mm10_v2_chr1_-_106714217_106714330	0.144861	UUGGCAC	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr12_-_31713873_31713947	0.143506	UUGGCAC	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr7_+_35586232_35586290	0.142528	UUGGCAC	ENSMUST00000040844.9|Ankrd27|ENSMUSG00000034867.10|ankyrin repeat domain 27 (VPS9 domain)
mm10_v2_chr3_-_125938537_125938605	0.14158	UUGGCAC	ENSMUST00000057944.7|Ugt8a|ENSMUSG00000032854.8|UDP galactosyltransferase 8A
mm10_v2_chr6_-_85502980_85503034	0.141128	UUGGCAC	ENSMUST00000159062.1|Fbxo41|ENSMUSG00000047013.9|F-box protein 41
mm10_v2_chr16_+_30599717_30599734	0.140795	UUGGCAC	ENSMUST00000059078.3|Fam43a|ENSMUSG00000046546.3|family with sequence similarity 43, member A
mm10_v2_chr6_-_90810118_90810160	0.138811	UUGGCAC	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr16_+_16896469_16896598	0.137208	UUGGCAC	ENSMUST00000027373.9|Ppm1f|ENSMUSG00000026181.11|protein phosphatase 1F (PP2C domain containing)
mm10_v2_chr1_-_176807124_176807124	0.136345	UUGGCAC	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr7_-_49636847_49636851	0.135099	UUGGCAC	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr4_+_140700487_140700541	0.135014	UUGGCAC	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr9_-_16378231_16378231	0.134067	UUGGCAC	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chr15_-_98607611_98607638	0.132966	UUGGCAC	ENSMUST00000096224.4|Adcy6|ENSMUSG00000022994.8|adenylate cyclase 6
mm10_v2_chr7_-_45824750_45824761	0.132329	UUGGCAC	ENSMUST00000071937.5|Kcnj14|ENSMUSG00000058743.5|potassium inwardly-rectifying channel, subfamily J, member 14
mm10_v2_chr1_+_187997821_187997834	0.131724	UUGGCAC	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr13_+_96924674_96924694	0.130563	UUGGCAC	ENSMUST00000171324.1|Gcnt4|ENSMUSG00000091387.1|glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
mm10_v2_chr6_+_40110251_40110251	0.130431	UUGGCAC	ENSMUST00000061740.7|Tmem178b|ENSMUSG00000057716.6|transmembrane protein 178B
mm10_v2_chr5_-_96161990_96162097	0.128542	UUGGCAC	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr15_-_64060439_64060478	0.127862	UUGGCAC	ENSMUST00000063838.4|Fam49b|ENSMUSG00000022378.7|family with sequence similarity 49, member B
mm10_v2_chr6_+_14901344_14901364	0.124975	UUGGCAC	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr12_+_40446050_40446099	0.12485	UUGGCAC	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr7_+_44310213_44310253	0.121201	UUGGCAC	ENSMUST00000107938.1|Shank1|ENSMUSG00000038738.9|SH3/ankyrin domain gene 1
mm10_v2_chr11_+_32347800_32347865	0.119668	UUGGCAC	ENSMUST00000038753.5|Sh3pxd2b|ENSMUSG00000040711.7|SH3 and PX domains 2B
mm10_v2_chr1_-_167285110_167285127	0.119486	UUGGCAC	ENSMUST00000027839.8|Uck2|ENSMUSG00000026558.8|uridine-cytidine kinase 2
mm10_v2_chr2_-_73529725_73529736	0.118939	UUGGCAC	ENSMUST00000094681.4|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr3_-_153725062_153725179	0.118328	UUGGCAC	ENSMUST00000064460.5|St6galnac3|ENSMUSG00000052544.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm10_v2_chr14_-_79771305_79771318	0.118257	UUGGCAC	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr16_+_13358375_13358439	0.117555	UUGGCAC	ENSMUST00000149359.1|Mkl2|ENSMUSG00000009569.8|MKL/myocardin-like 2
mm10_v2_chr5_-_38159457_38159491	0.117084	UUGGCAC	ENSMUST00000031009.4|Nsg1|ENSMUSG00000029126.4|neuron specific gene family member 1
mm10_v2_chr10_-_61452658_61452813	0.116836	UUGGCAC	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr7_-_118995211_118995219	0.115297	UUGGCAC	ENSMUST00000008878.8|Gprc5b|ENSMUSG00000008734.8|G protein-coupled receptor, family C, group 5, member B
mm10_v2_chr17_-_72603709_72603709	0.113358	UUGGCAC	ENSMUST00000086639.4|Alk|ENSMUSG00000055471.6|anaplastic lymphoma kinase
mm10_v2_chr15_-_53902472_53902530	0.110165	UUGGCAC	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr17_-_81649607_81649607	0.107672	UUGGCAC	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr14_-_121797670_121797753	0.107282	UUGGCAC	ENSMUST00000100299.3|Dock9|ENSMUSG00000025558.9|dedicator of cytokinesis 9
mm10_v2_chr14_+_47663756_47663756	0.106831	UUGGCAC	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr4_+_9269285_9269335	0.106768	UUGGCAC	ENSMUST00000038841.7|Clvs1|ENSMUSG00000041216.9|clavesin 1
mm10_v2_chr15_-_73184840_73184971	0.106732	UUGGCAC	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr12_-_98901478_98901492	0.106662	UUGGCAC	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr17_-_28622479_28622521	0.106305	UUGGCAC	ENSMUST00000130643.1|Srpk1|ENSMUSG00000004865.9|serine/arginine-rich protein specific kinase 1
mm10_v2_chr10_+_128377086_128377155	0.103919	UUGGCAC	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr12_+_78861693_78861819	0.103639	UUGGCAC	ENSMUST00000071230.7|Eif2s1|ENSMUSG00000021116.9|eukaryotic translation initiation factor 2, subunit 1 alpha
mm10_v2_chr10_+_127165118_127165225	0.103538	UUGGCAC	ENSMUST00000006914.9|B4galnt1|ENSMUSG00000006731.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm10_v2_chr16_+_42907563_42907684	0.103254	UUGGCAC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr9_+_21337828_21337859	0.102486	UUGGCAC	ENSMUST00000034697.7|Slc44a2|ENSMUSG00000057193.7|solute carrier family 44, member 2
mm10_v2_chr14_-_78725089_78725089	0.10191	UUGGCAC	ENSMUST00000074729.5|Dgkh|ENSMUSG00000034731.9|diacylglycerol kinase, eta
mm10_v2_chr9_-_21149894_21149978	0.101704	UUGGCAC	ENSMUST00000019615.9|Cdc37|ENSMUSG00000019471.9|cell division cycle 37
mm10_v2_chr16_+_14705832_14705858	0.101578	UUGGCAC	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr17_-_29264115_29264158	0.101503	UUGGCAC	ENSMUST00000024802.8|Ppil1|ENSMUSG00000024007.8|peptidylprolyl isomerase (cyclophilin)-like 1
mm10_v2_chr7_+_45783686_45783801	0.101474	UUGGCAC	ENSMUST00000118564.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000133428.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr6_-_146502099_146502133	0.0988705	UUGGCAC	ENSMUST00000053273.8|Itpr2|ENSMUSG00000030287.9|inositol 1,4,5-triphosphate receptor 2
mm10_v2_chr2_-_24763047_24763153	0.0983774	UUGGCAC	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr12_-_85097080_85097091	0.0978634	UUGGCAC	ENSMUST00000177289.2|Prox2|ENSMUSG00000042320.10|prospero homeobox 2
mm10_v2_chr11_+_78188422_78188447	0.0976952	UUGGCAC	ENSMUST00000002128.7|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family 	ENSMUST00000150941.1|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family
mm10_v2_chr2_+_16356294_16356316	0.0975887	UUGGCAC	ENSMUST00000028081.6|Plxdc2|ENSMUSG00000026748.7|plexin domain containing 2
mm10_v2_chr9_+_47530173_47530373	0.0975644	UUGGCAC	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr15_+_55112317_55112346	0.0970072	UUGGCAC	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr12_-_101028983_101029042	0.0950433	UUGGCAC	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr14_+_27622433_27622543	0.0935494	UUGGCAC	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr8_-_116732991_116733076	0.0915271	UUGGCAC	ENSMUST00000109102.2|Cdyl2|ENSMUSG00000031758.9|chromodomain protein, Y chromosome-like 2
mm10_v2_chr15_-_91573181_91573261	0.0906106	UUGGCAC	ENSMUST00000109283.1|Slc2a13|ENSMUSG00000036298.10|solute carrier family 2 (facilitated glucose transporter), member 13
mm10_v2_chr17_-_56935388_56935504	0.0902831	UUGGCAC	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr9_-_65827544_65827576	0.0892998	UUGGCAC	ENSMUST00000159109.1|Zfp609|ENSMUSG00000040524.9|zinc finger protein 609
mm10_v2_chr16_-_97170707_97170759	0.0891025	UUGGCAC	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr11_-_120047070_120047129	0.0888406	UUGGCAC	ENSMUST00000064307.3|Aatk|ENSMUSG00000025375.9|apoptosis-associated tyrosine kinase
mm10_v2_chr9_+_108826320_108826320	0.0887329	UUGGCAC	ENSMUST00000024238.5|Celsr3|ENSMUSG00000023473.6|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
mm10_v2_chr3_-_10440054_10440127	0.0886526	UUGGCAC	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr3_+_101377074_101377158	0.0886272	UUGGCAC	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr13_+_46273700_46273721	0.0885365	UUGGCAC	ENSMUST00000076622.3|Stmnd1|ENSMUSG00000063529.3|stathmin domain containing 1
mm10_v2_chr8_+_114205590_114205642	0.0882281	UUGGCAC	ENSMUST00000049509.6|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica) 	ENSMUST00000150963.1|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica)
mm10_v2_chr17_+_86167777_86167795	0.0877885	UUGGCAC	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr7_-_102759465_102759478	0.0876307	UUGGCAC	ENSMUST00000168007.1|Olfr78|ENSMUSG00000043366.7|olfactory receptor 78 	ENSMUST00000060187.7|Olfr78|ENSMUSG00000043366.7|olfactory receptor 78
mm10_v2_chr15_+_8109313_8109356	0.0875075	UUGGCAC	ENSMUST00000163765.1|Nup155|ENSMUSG00000022142.7|nucleoporin 155
mm10_v2_chr6_-_143947092_143947111	0.0872598	UUGGCAC	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr3_-_103809278_103809444	0.086568	UUGGCAC	ENSMUST00000063502.6|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106832.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106834.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000029435.8|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)
mm10_v2_chr15_-_25413752_25413773	0.0865291	UUGGCAC	ENSMUST00000058845.7|Basp1|ENSMUSG00000045763.7|brain abundant, membrane attached signal protein 1
mm10_v2_chr18_+_69345721_69345811	0.0860171	UUGGCAC	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr16_+_11322876_11322911	0.0859715	UUGGCAC	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr6_+_136518820_136518851	0.0858965	UUGGCAC	ENSMUST00000032335.6|Atf7ip|ENSMUSG00000030213.6|activating transcription factor 7 interacting protein
mm10_v2_chr18_+_11839220_11839475	0.0848468	UUGGCAC	ENSMUST00000171109.1|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1 	ENSMUST00000046948.8|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1
mm10_v2_chr15_-_12592556_12592556	0.084405	UUGGCAC	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr5_-_113908685_113908758	0.084335	UUGGCAC	ENSMUST00000004646.6|Coro1c|ENSMUSG00000004530.6|coronin, actin binding protein 1C
mm10_v2_chr1_+_127204986_127205051	0.0833222	UUGGCAC	ENSMUST00000038361.4|Mgat5|ENSMUSG00000036155.7|mannoside acetylglucosaminyltransferase 5
mm10_v2_chr16_-_94997653_94997704	0.0830363	UUGGCAC	ENSMUST00000095873.4|Kcnj6|ENSMUSG00000043301.9|potassium inwardly-rectifying channel, subfamily J, member 6 	ENSMUST00000099508.2|Kcnj6|ENSMUSG00000043301.9|potassium inwardly-rectifying channel, subfamily J, member 6
mm10_v2_chr7_+_47050628_47050646	0.0811334	UUGGCAC	ENSMUST00000010451.5|Tmem86a|ENSMUSG00000010307.5|transmembrane protein 86A
mm10_v2_chr12_+_83632208_83632325	0.0800691	UUGGCAC	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr9_+_92542223_92542272	0.0796097	UUGGCAC	ENSMUST00000070522.7|Plod2|ENSMUSG00000032374.8|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 	ENSMUST00000160359.1|Plod2|ENSMUSG00000032374.8|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm10_v2_chr4_+_59805829_59805914	0.0794335	UUGGCAC	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr2_+_65620829_65620857	0.079134	UUGGCAC	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr14_+_70077375_70077445	0.0785167	UUGGCAC	ENSMUST00000035908.1|Egr3|ENSMUSG00000033730.3|early growth response 3
mm10_v2_chr9_-_50659780_50659801	0.0775249	UUGGCAC	ENSMUST00000034567.3|Dlat|ENSMUSG00000000168.3|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm10_v2_chr10_-_80918212_80918256	0.0771654	UUGGCAC	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr3_+_69316857_69316869	0.0759346	UUGGCAC	ENSMUST00000029355.6|Ppm1l|ENSMUSG00000027784.8|protein phosphatase 1 (formerly 2C)-like
mm10_v2_chr6_+_120836201_120836257	0.0758015	UUGGCAC	ENSMUST00000009256.2|Bcl2l13|ENSMUSG00000009112.2|BCL2-like 13 (apoptosis facilitator)
mm10_v2_chr7_+_112679314_112679325	0.0756796	UUGGCAC	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr4_-_126429501_126429556	0.0754544	UUGGCAC	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr17_-_14694223_14694262	0.0752566	UUGGCAC	ENSMUST00000170872.1|Thbs2|ENSMUSG00000023885.8|thrombospondin 2
mm10_v2_chr18_+_84088077_84088178	0.0750661	UUGGCAC	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr1_+_181150926_181150984	0.074913	UUGGCAC	ENSMUST00000134115.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila) 	ENSMUST00000111059.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila)
mm10_v2_chr1_-_158356258_158356313	0.0734859	UUGGCAC	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr8_-_84687839_84687884	0.0731894	UUGGCAC	ENSMUST00000001975.4|Nacc1|ENSMUSG00000001910.4|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm10_v2_chr13_-_95250166_95250336	0.0718971	UUGGCAC	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr3_-_9610074_9610086	0.0716889	UUGGCAC	ENSMUST00000041124.7|Zfp704|ENSMUSG00000040209.7|zinc finger protein 704
mm10_v2_chr12_+_83950608_83950705	0.071134	UUGGCAC	ENSMUST00000053744.7|2410016O06Rik|ENSMUSG00000046791.7|RIKEN cDNA 2410016O06 gene
mm10_v2_chr4_-_141538434_141538525	0.0709226	UUGGCAC	ENSMUST00000078886.3|Spen|ENSMUSG00000040761.10|SPEN homolog, transcriptional regulator (Drosophila)
mm10_v2_chr18_+_65580230_65580400	0.0705887	UUGGCAC	ENSMUST00000049016.5|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183236.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr3_+_126363827_126363827	0.0700698	UUGGCAC	ENSMUST00000093976.2|Arsj|ENSMUSG00000046561.8|arylsulfatase J
mm10_v2_chr1_-_153332724_153332804	0.0691829	UUGGCAC	ENSMUST00000027752.8|Lamc1|ENSMUSG00000026478.8|laminin, gamma 1
mm10_v2_chr4_+_136469755_136469850	0.0685189	UUGGCAC	ENSMUST00000170102.1|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000105849.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000129230.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1
mm10_v2_chr10_-_23787195_23787206	0.0680168	UUGGCAC	ENSMUST00000073926.6|Rps12|ENSMUSG00000061983.6|ribosomal protein S12
mm10_v2_chr11_-_12037391_12037407	0.0679757	UUGGCAC	ENSMUST00000093321.5|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr8_-_126475062_126475097	0.0675369	UUGGCAC	ENSMUST00000170518.1|Gm17296|ENSMUSG00000090290.1|predicted gene, 17296
mm10_v2_chr11_+_44617310_44617336	0.066363	UUGGCAC	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr18_+_34840575_34840589	0.0662874	UUGGCAC	ENSMUST00000043484.7|Reep2|ENSMUSG00000038555.7|receptor accessory protein 2
mm10_v2_chr2_+_25242929_25243087	0.066212	UUGGCAC	ENSMUST00000114355.1|Rnf208|ENSMUSG00000044628.4|ring finger protein 208 	ENSMUST00000060818.1|Rnf208|ENSMUSG00000044628.4|ring finger protein 208
mm10_v2_chr2_-_125723387_125723537	0.0649424	UUGGCAC	ENSMUST00000042246.7|Shc4|ENSMUSG00000035109.8|SHC (Src homology 2 domain containing) family, member 4
mm10_v2_chr2_+_31759932_31759989	0.0645743	UUGGCAC	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr2_-_65567465_65567495	0.0644165	UUGGCAC	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr18_-_80469664_80469719	0.0642766	UUGGCAC	ENSMUST00000036229.6|Ctdp1|ENSMUSG00000033323.7|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
mm10_v2_chr1_-_79671966_79671993	0.0641478	UUGGCAC	ENSMUST00000162342.1|Ap1s3|ENSMUSG00000054702.8|adaptor-related protein complex AP-1, sigma 3
mm10_v2_chr12_+_118846329_118846329	0.0639571	UUGGCAC	ENSMUST00000063918.2|Sp8|ENSMUSG00000048562.6|trans-acting transcription factor 8
mm10_v2_chr11_+_87127052_87127105	0.0634743	UUGGCAC	ENSMUST00000041282.6|Trim37|ENSMUSG00000018548.9|tripartite motif-containing 37
mm10_v2_chr1_-_172027269_172027313	0.0634557	UUGGCAC	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr11_+_57518657_57518722	0.0630711	UUGGCAC	ENSMUST00000108849.1|Mfap3|ENSMUSG00000020522.7|microfibrillar-associated protein 3 	ENSMUST00000020830.7|Mfap3|ENSMUSG00000020522.7|microfibrillar-associated protein 3
mm10_v2_chr9_+_14276301_14276347	0.0627264	UUGGCAC	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr2_-_31141802_31142001	0.0623991	UUGGCAC	ENSMUST00000073879.5|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000100208.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000100207.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000113555.1|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000075326.4|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000113552.2|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1 	ENSMUST00000136181.1|Fnbp1|ENSMUSG00000075415.7|formin binding protein 1
mm10_v2_chr5_+_134099704_134099760	0.0620758	UUGGCAC	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr18_+_14783238_14783259	0.0616841	UUGGCAC	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr6_+_42264983_42265032	0.0607847	UUGGCAC	ENSMUST00000031895.6|Casp2|ENSMUSG00000029863.7|caspase 2
mm10_v2_chr14_-_45658142_45658183	0.0602886	UUGGCAC	ENSMUST00000111828.2|Ddhd1|ENSMUSG00000037697.12|DDHD domain containing 1 	ENSMUST00000051310.6|Ddhd1|ENSMUSG00000037697.12|DDHD domain containing 1
mm10_v2_chr14_-_26971232_26971232	0.0602268	UUGGCAC	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr5_-_114773488_114773517	0.0601128	UUGGCAC	ENSMUST00000178440.1|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000043283.7|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2 	ENSMUST00000112185.2|Git2|ENSMUSG00000041890.11|G protein-coupled receptor kinase-interactor 2
mm10_v2_chr16_-_42340595_42340651	0.0599884	UUGGCAC	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr2_+_3118335_3118392	0.0599713	UUGGCAC	ENSMUST00000115099.2|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr8_-_121652895_121652913	0.0595944	UUGGCAC	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr17_-_46831413_46831413	0.0595042	UUGGCAC	ENSMUST00000040624.5|Gltscr1l|ENSMUSG00000036568.6|GLTSCR1-like
mm10_v2_chr19_-_59345746_59345853	0.0584825	UUGGCAC	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr16_-_58523349_58523426	0.0581998	UUGGCAC	ENSMUST00000137035.1|St3gal6|ENSMUSG00000022747.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm10_v2_chr1_+_139422196_139422383	0.0580065	UUGGCAC	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr1_-_38129618_38129679	0.0576955	UUGGCAC	ENSMUST00000027251.6|Rev1|ENSMUSG00000026082.6|REV1 homolog (S. cerevisiae)
mm10_v2_chr7_+_87602544_87602544	0.0576702	UUGGCAC	ENSMUST00000167164.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5 	ENSMUST00000107263.2|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5
mm10_v2_chr4_-_151861762_151861876	0.057454	UUGGCAC	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr5_+_144100387_144100436	0.0571847	UUGGCAC	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr14_+_120275669_120275714	0.0569629	UUGGCAC	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chrX_-_75130996_75131016	0.0568065	UUGGCAC	ENSMUST00000033775.2|Mpp1|ENSMUSG00000031402.6|membrane protein, palmitoylated
mm10_v2_chr4_-_136835843_136835988	0.0567932	UUGGCAC	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr3_-_144570136_144570227	0.0565344	UUGGCAC	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr2_+_72285637_72285749	0.0564094	UUGGCAC	ENSMUST00000090824.5|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK 	ENSMUST00000135469.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr9_+_75037614_75037701	0.0559015	UUGGCAC	ENSMUST00000168166.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000169492.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000170308.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr15_+_6708372_6708396	0.0558105	UUGGCAC	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr2_+_105668888_105668914	0.0557572	UUGGCAC	ENSMUST00000111086.4|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000111087.3|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr10_+_81136223_81136271	0.0555238	UUGGCAC	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr1_-_53785214_53785229	0.054169	UUGGCAC	ENSMUST00000027263.7|Stk17b|ENSMUSG00000026094.8|serine/threonine kinase 17b (apoptosis-inducing)
mm10_v2_chr4_-_6990774_6990823	0.053894	UUGGCAC	ENSMUST00000039987.3|Tox|ENSMUSG00000041272.5|thymocyte selection-associated high mobility group box
mm10_v2_chr11_+_75531690_75531743	0.0538423	UUGGCAC	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr6_+_108213086_108213123	0.0537599	UUGGCAC	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr4_-_149955028_149955048	0.0536155	UUGGCAC	ENSMUST00000038562.2|Spsb1|ENSMUSG00000039911.7|splA/ryanodine receptor domain and SOCS box containing 1
mm10_v2_chr10_-_53379816_53379858	0.0533359	UUGGCAC	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr7_-_98361310_98361328	0.0531438	UUGGCAC	ENSMUST00000165257.1|Tsku|ENSMUSG00000049580.6|tsukushi
mm10_v2_chr3_+_99253754_99253807	0.0531001	UUGGCAC	ENSMUST00000029462.5|Tbx15|ENSMUSG00000027868.5|T-box 15
mm10_v2_chr7_+_97842917_97842980	0.0504471	UUGGCAC	ENSMUST00000033040.5|Pak1|ENSMUSG00000030774.7|p21 protein (Cdc42/Rac)-activated kinase 1
mm10_v2_chr1_-_119837613_119837673	0.0503835	UUGGCAC	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chrX_+_166238901_166238914	0.0502326	UUGGCAC	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr2_+_25428699_25428715	0.0498009	UUGGCAC	ENSMUST00000102919.3|Abca2|ENSMUSG00000026944.12|ATP-binding cassette, sub-family A (ABC1), member 2
mm10_v2_chr9_-_62980874_62980902	0.0490553	UUGGCAC	ENSMUST00000098651.4|Pias1|ENSMUSG00000032405.9|protein inhibitor of activated STAT 1
mm10_v2_chr10_+_79927039_79927139	0.0487711	UUGGCAC	ENSMUST00000019708.5|Arid3a|ENSMUSG00000019564.6|AT rich interactive domain 3A (BRIGHT-like) 	ENSMUST00000105377.1|Arid3a|ENSMUSG00000019564.6|AT rich interactive domain 3A (BRIGHT-like)
mm10_v2_chr12_-_98577940_98578046	0.0486119	UUGGCAC	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr5_+_30232581_30232680	0.0484744	UUGGCAC	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr2_+_153741274_153741294	0.0482384	UUGGCAC	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr3_+_8509477_8509550	0.0480887	UUGGCAC	ENSMUST00000029002.7|Stmn2|ENSMUSG00000027500.9|stathmin-like 2
mm10_v2_chr5_+_65537209_65537233	0.0479451	UUGGCAC	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chrX_+_68678541_68678554	0.0475533	UUGGCAC	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr5_-_41844168_41844329	0.0471591	UUGGCAC	ENSMUST00000050556.7|Bod1l|ENSMUSG00000061755.7|biorientation of chromosomes in cell division 1-like
mm10_v2_chr15_-_56694525_56694554	0.0470435	UUGGCAC	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr8_+_70539675_70539710	0.0461496	UUGGCAC	ENSMUST00000093454.6|Ell|ENSMUSG00000070002.6|elongation factor RNA polymerase II
mm10_v2_chr17_-_80480435_80480462	0.0456453	UUGGCAC	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr15_+_92051153_92051170	0.0452568	UUGGCAC	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr8_+_83900096_83900110	0.0448927	UUGGCAC	ENSMUST00000141158.1|Lphn1|ENSMUSG00000013033.10|latrophilin 1
mm10_v2_chr10_-_18743691_18743760	0.0445539	UUGGCAC	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr10_+_94688739_94688808	0.0442904	UUGGCAC	ENSMUST00000020212.4|Ccdc41|ENSMUSG00000020024.6|coiled-coil domain containing 41
mm10_v2_chr6_+_8209216_8209263	0.0429683	UUGGCAC	ENSMUST00000040017.7|Mios|ENSMUSG00000042447.7|missing oocyte, meiosis regulator, homolog (Drosophila)
mm10_v2_chr1_-_51915968_51916071	0.0425405	UUGGCAC	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr1_-_46854046_46854079	0.042526	UUGGCAC	ENSMUST00000027131.4|Slc39a10|ENSMUSG00000025986.5|solute carrier family 39 (zinc transporter), member 10
mm10_v2_chr11_-_74724670_74724702	0.042389	UUGGCAC	ENSMUST00000021091.8|Pafah1b1|ENSMUSG00000020745.9|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm10_v2_chr15_-_79742518_79742562	0.0421439	UUGGCAC	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr14_-_103346765_103346841	0.0418993	UUGGCAC	ENSMUST00000159855.1|Mycbp2|ENSMUSG00000033004.8|MYC binding protein 2
mm10_v2_chr11_-_116843449_116843505	0.0413939	UUGGCAC	ENSMUST00000047616.3|Jmjd6|ENSMUSG00000056962.5|jumonji domain containing 6
mm10_v2_chrX_-_167382747_167382760	0.0406826	UUGGCAC	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr12_-_34528844_34528904	0.0405336	UUGGCAC	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr13_-_74317234_74317326	0.0402917	UUGGCAC	ENSMUST00000022060.5|Pdcd6|ENSMUSG00000021576.5|programmed cell death 6
mm10_v2_chr2_-_32431104_32431178	0.0402911	UUGGCAC	ENSMUST00000127961.1|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 	ENSMUST00000136361.1|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 	ENSMUST00000052119.7|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm10_v2_chr4_+_21776261_21776297	0.039883	UUGGCAC	ENSMUST00000065111.8|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000040429.5|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000148304.1|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45
mm10_v2_chr4_+_148448605_148448637	0.0391212	UUGGCAC	ENSMUST00000103221.3|Mtor|ENSMUSG00000028991.9|mechanistic target of rapamycin (serine/threonine kinase) 	ENSMUST00000057580.7|Mtor|ENSMUSG00000028991.9|mechanistic target of rapamycin (serine/threonine kinase)
mm10_v2_chr11_-_70220969_70221027	0.0385201	UUGGCAC	ENSMUST00000060010.2|Slc16a13|ENSMUSG00000044367.6|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm10_v2_chr4_-_126468580_126468653	0.0385044	UUGGCAC	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr15_+_85037062_85037143	0.0383577	UUGGCAC	ENSMUST00000023069.7|Fam118a|ENSMUSG00000022434.7|family with sequence similarity 118, member A
mm10_v2_chr10_-_14544972_14545036	0.0383501	UUGGCAC	ENSMUST00000041168.4|Gpr126|ENSMUSG00000039116.4|G protein-coupled receptor 126
mm10_v2_chrX_-_147554050_147554087	0.0382963	UUGGCAC	ENSMUST00000112819.2|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2 	ENSMUST00000136789.1|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2
mm10_v2_chr9_+_52047150_52047163	0.0382505	UUGGCAC	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr4_+_55350043_55350078	0.0381498	UUGGCAC	ENSMUST00000030134.8|Rad23b|ENSMUSG00000028426.10|RAD23b homolog (S. cerevisiae)
mm10_v2_chr7_+_87246649_87246661	0.0370724	UUGGCAC	ENSMUST00000068829.5|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4 	ENSMUST00000032781.7|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4
mm10_v2_chr3_-_89245159_89245199	0.0370386	UUGGCAC	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr12_-_46818749_46818788	0.0368794	UUGGCAC	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr2_+_162943474_162943516	0.0367749	UUGGCAC	ENSMUST00000035751.5|L3mbtl1|ENSMUSG00000035576.7|l(3)mbt-like (Drosophila) 	ENSMUST00000156954.1|L3mbtl1|ENSMUSG00000035576.7|l(3)mbt-like (Drosophila)
mm10_v2_chr19_-_47536997_47537119	0.0366348	UUGGCAC	ENSMUST00000182808.1|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1 	ENSMUST00000049369.9|Obfc1|ENSMUSG00000042694.11|oligonucleotide/oligosaccharide-binding fold containing 1
mm10_v2_chr5_-_8622855_8622952	0.0364928	UUGGCAC	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr4_-_118134869_118134962	0.0360061	UUGGCAC	ENSMUST00000097912.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000030263.2|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000106410.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3
mm10_v2_chr15_+_81586206_81586250	0.0359109	UUGGCAC	ENSMUST00000068387.4|Ep300|ENSMUSG00000055024.6|E1A binding protein p300
mm10_v2_chr17_-_14961273_14961273	0.0355234	UUGGCAC	ENSMUST00000024657.5|Phf10|ENSMUSG00000023883.7|PHD finger protein 10
mm10_v2_chr5_-_67847400_67847439	0.0354365	UUGGCAC	ENSMUST00000113652.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000113651.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000037380.8|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm10_v2_chr1_-_156939626_156939657	0.0353736	UUGGCAC	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr10_-_115315546_115315615	0.0352705	UUGGCAC	ENSMUST00000020343.7|Rab21|ENSMUSG00000020132.9|RAB21, member RAS oncogene family
mm10_v2_chr16_+_17489600_17489627	0.0350107	UUGGCAC	ENSMUST00000115685.1|Aifm3|ENSMUSG00000022763.10|apoptosis-inducing factor, mitochondrion-associated 3
mm10_v2_chr12_+_76370266_76370266	0.0346097	UUGGCAC	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr3_+_136670076_136670186	0.0345367	UUGGCAC	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr14_+_122475397_122475435	0.0345019	UUGGCAC	ENSMUST00000075888.5|Zic2|ENSMUSG00000061524.8|zinc finger protein of the cerebellum 2
mm10_v2_chr6_+_116264186_116264225	0.0344461	UUGGCAC	ENSMUST00000036503.7|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4 	ENSMUST00000112900.3|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4
mm10_v2_chr14_-_31417666_31417678	0.0343067	UUGGCAC	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr2_+_153031852_153032014	0.034102	UUGGCAC	ENSMUST00000037235.6|Xkr7|ENSMUSG00000042631.7|X Kell blood group precursor related family member 7 homolog
mm10_v2_chr5_-_22550279_22550386	0.0339879	UUGGCAC	ENSMUST00000030872.5|Orc5|ENSMUSG00000029012.5|origin recognition complex, subunit 5
mm10_v2_chrX_+_37126777_37126795	0.0339673	UUGGCAC	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr11_+_29373618_29373777	0.0337643	UUGGCAC	ENSMUST00000040182.6|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A 	ENSMUST00000109477.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr10_-_7663245_7663309	0.0332707	UUGGCAC	ENSMUST00000163085.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 	ENSMUST00000159917.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr16_+_44139821_44139900	0.0332551	UUGGCAC	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr11_-_98022594_98022671	0.0332457	UUGGCAC	ENSMUST00000103144.3|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000017552.6|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000092736.4|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000107562.1|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr3_+_34020075_34020082	0.0329387	UUGGCAC	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr12_+_111039334_111039400	0.0324213	UUGGCAC	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr5_-_135934590_135934613	0.0321117	UUGGCAC	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr18_+_34758890_34758906	0.0320435	UUGGCAC	ENSMUST00000049281.5|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr15_-_8444449_8444506	0.0318768	UUGGCAC	ENSMUST00000052965.6|Nipbl|ENSMUSG00000022141.6|Nipped-B homolog (Drosophila)
mm10_v2_chrX_-_52613913_52613924	0.031849	UUGGCAC	ENSMUST00000069360.7|Gpc3|ENSMUSG00000055653.7|glypican 3
mm10_v2_chr13_+_13437602_13437602	0.0318241	UUGGCAC	ENSMUST00000005532.7|Nid1|ENSMUSG00000005397.7|nidogen 1
mm10_v2_chr1_+_143640664_143640751	0.03182	UUGGCAC	ENSMUST00000038252.2|B3galt2|ENSMUSG00000033849.2|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm10_v2_chr11_-_74590186_74590215	0.0316093	UUGGCAC	ENSMUST00000102521.1|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2
mm10_v2_chr9_-_62811592_62811659	0.03067	UUGGCAC	ENSMUST00000034775.8|Fem1b|ENSMUSG00000032244.8|feminization 1 homolog b (C. elegans)
mm10_v2_chr11_-_22982090_22982382	0.0305928	UUGGCAC	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr6_-_53068562_53068656	0.0294281	UUGGCAC	ENSMUST00000074541.5|Jazf1|ENSMUSG00000063568.5|JAZF zinc finger 1
mm10_v2_chr1_-_136346074_136346145	0.0290336	UUGGCAC	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr13_+_51100810_51100933	0.0288308	UUGGCAC	ENSMUST00000095797.5|Spin1|ENSMUSG00000021395.10|spindlin 1
mm10_v2_chr5_-_120612558_120612598	0.0287141	UUGGCAC	ENSMUST00000140554.1|1110008J03Rik|ENSMUSG00000029600.4|RIKEN cDNA 1110008J03 gene 	ENSMUST00000031599.2|1110008J03Rik|ENSMUSG00000029600.4|RIKEN cDNA 1110008J03 gene 	ENSMUST00000177800.1|1110008J03Rik|ENSMUSG00000029600.4|RIKEN cDNA 1110008J03 gene
mm10_v2_chrX_+_135839034_135839075	0.0281584	UUGGCAC	ENSMUST00000173804.1|Gprasp2|ENSMUSG00000072966.5|G protein-coupled receptor associated sorting protein 2 	ENSMUST00000113136.1|Gprasp2|ENSMUSG00000072966.5|G protein-coupled receptor associated sorting protein 2
mm10_v2_chr3_-_107333289_107333289	0.0275757	UUGGCAC	ENSMUST00000061772.9|Rbm15|ENSMUSG00000048109.9|RNA binding motif protein 15
mm10_v2_chr18_+_35598607_35598653	0.0273587	UUGGCAC	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr2_-_92459709_92459794	0.0272135	UUGGCAC	ENSMUST00000136718.1|Slc35c1|ENSMUSG00000049922.8|solute carrier family 35, member C1 	ENSMUST00000067631.6|Slc35c1|ENSMUSG00000049922.8|solute carrier family 35, member C1
mm10_v2_chr1_+_63445842_63445943	0.0270857	UUGGCAC	ENSMUST00000087374.3|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000114107.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000182642.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23
mm10_v2_chr2_-_6884975_6884996	0.0268602	UUGGCAC	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr1_-_97661950_97662074	0.0265579	UUGGCAC	ENSMUST00000053033.7|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed 	ENSMUST00000149927.1|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed
mm10_v2_chr9_-_81633828_81633828	0.0263128	UUGGCAC	ENSMUST00000183482.1|Htr1b|ENSMUSG00000049511.5|5-hydroxytryptamine (serotonin) receptor 1B
mm10_v2_chr15_+_32920723_32920826	0.0257407	UUGGCAC	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr11_-_59506644_59506644	0.0254341	UUGGCAC	ENSMUST00000101150.2|Zkscan17|ENSMUSG00000020472.8|zinc finger with KRAB and SCAN domains 17 	ENSMUST00000013262.8|Zkscan17|ENSMUSG00000020472.8|zinc finger with KRAB and SCAN domains 17
mm10_v2_chr8_-_80057989_80058017	0.0254251	UUGGCAC	ENSMUST00000079038.2|Hhip|ENSMUSG00000064325.3|Hedgehog-interacting protein
mm10_v2_chr9_+_102834961_102834972	0.0254176	UUGGCAC	ENSMUST00000035142.6|Ryk|ENSMUSG00000032547.6|receptor-like tyrosine kinase
mm10_v2_chr3_+_14578609_14578687	0.0252313	UUGGCAC	ENSMUST00000029069.6|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5 	ENSMUST00000165922.2|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5
mm10_v2_chr18_+_64254359_64254387	0.025	UUGGCAC	ENSMUST00000025477.7|St8sia3|ENSMUSG00000056812.7|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm10_v2_chr11_+_60417238_60417301	0.0248582	UUGGCAC	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chrX_+_58030622_58030643	0.024727	UUGGCAC	ENSMUST00000088627.4|Zic3|ENSMUSG00000067860.5|zinc finger protein of the cerebellum 3
mm10_v2_chr11_+_77686155_77686179	0.0246638	UUGGCAC	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr11_+_83473079_83473123	0.024375	UUGGCAC	ENSMUST00000021018.4|Taf15|ENSMUSG00000020680.9|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr19_+_53140430_53140449	0.0242163	UUGGCAC	ENSMUST00000111741.2|Add3|ENSMUSG00000025026.8|adducin 3 (gamma)
mm10_v2_chr11_+_117199641_117199663	0.0240474	UUGGCAC	ENSMUST00000093907.4|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr7_+_123123870_123123901	0.0239176	UUGGCAC	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr2_-_163918683_163918683	0.0237629	UUGGCAC	ENSMUST00000044734.2|Rims4|ENSMUSG00000035226.5|regulating synaptic membrane exocytosis 4
mm10_v2_chr16_+_32877775_32877831	0.0236574	UUGGCAC	ENSMUST00000023489.4|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1 	ENSMUST00000171325.1|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1
mm10_v2_chr3_+_32436151_32436151	0.0236569	UUGGCAC	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr10_-_42276744_42276763	0.0234014	UUGGCAC	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr4_-_132510493_132510509	0.0233854	UUGGCAC	ENSMUST00000030724.8|Sesn2|ENSMUSG00000028893.8|sestrin 2
mm10_v2_chr5_-_147076482_147076586	0.023378	UUGGCAC	ENSMUST00000016664.7|Lnx2|ENSMUSG00000016520.7|ligand of numb-protein X 2
mm10_v2_chr3_-_53463234_53463306	0.0233236	UUGGCAC	ENSMUST00000056749.7|Nhlrc3|ENSMUSG00000042997.7|NHL repeat containing 3
mm10_v2_chr18_+_64340225_64340364	0.0230949	UUGGCAC	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr15_+_86214431_86214459	0.0230887	UUGGCAC	ENSMUST00000063414.8|Tbc1d22a|ENSMUSG00000051864.9|TBC1 domain family, member 22a
mm10_v2_chr2_+_20737306_20737321	0.023087	UUGGCAC	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr8_+_110919916_110919994	0.02306	UUGGCAC	ENSMUST00000117534.1|St3gal2|ENSMUSG00000031749.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 2 	ENSMUST00000034197.4|St3gal2|ENSMUSG00000031749.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
mm10_v2_chr8_+_10272572_10272572	0.0227534	UUGGCAC	ENSMUST00000042103.8|Myo16|ENSMUSG00000039057.9|myosin XVI
mm10_v2_chr8_+_27042555_27042589	0.0223097	UUGGCAC	ENSMUST00000033875.8|Prosc|ENSMUSG00000031485.8|proline synthetase co-transcribed 	ENSMUST00000098851.4|Prosc|ENSMUSG00000031485.8|proline synthetase co-transcribed
mm10_v2_chr1_+_135324770_135324820	0.0219348	UUGGCAC	ENSMUST00000059352.2|Lmod1|ENSMUSG00000048096.7|leiomodin 1 (smooth muscle)
mm10_v2_chr11_+_119022962_119023104	0.0218695	UUGGCAC	ENSMUST00000026662.7|Cbx2|ENSMUSG00000025577.7|chromobox 2
mm10_v2_chr1_+_161142706_161142767	0.0217565	UUGGCAC	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr2_+_71981184_71981287	0.0216594	UUGGCAC	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr5_+_24100578_24100669	0.0214232	UUGGCAC	ENSMUST00000030841.5|Klhl7|ENSMUSG00000028986.6|kelch-like 7 	ENSMUST00000163409.1|Klhl7|ENSMUSG00000028986.6|kelch-like 7
mm10_v2_chr9_-_44881274_44881323	0.0212088	UUGGCAC	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr5_-_63968867_63968905	0.0209837	UUGGCAC	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chr11_-_115699461_115699534	0.0206733	UUGGCAC	ENSMUST00000106497.1|Grb2|ENSMUSG00000059923.7|growth factor receptor bound protein 2
mm10_v2_chr1_+_64532790_64532815	0.0206605	UUGGCAC	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr3_+_88142328_88142483	0.0205794	UUGGCAC	ENSMUST00000001455.6|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000119251.1|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr6_+_119848193_119848193	0.0203807	UUGGCAC	ENSMUST00000062454.1|3110021A11Rik|ENSMUSG00000050604.1|RIKEN cDNA 3110021A11 gene
mm10_v2_chr11_+_96034885_96034965	0.0202297	UUGGCAC	ENSMUST00000006217.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) 	ENSMUST00000107700.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
mm10_v2_chr13_+_93308006_93308034	0.0198978	UUGGCAC	ENSMUST00000079086.6|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr5_+_147430407_147430545	0.0198588	UUGGCAC	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr7_-_137314394_137314445	0.0198318	UUGGCAC	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr16_-_67620880_67620922	0.019546	UUGGCAC	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr1_-_181211437_181211552	0.0195248	UUGGCAC	ENSMUST00000162963.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26 	ENSMUST00000162819.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26
mm10_v2_chr11_+_17159263_17159357	0.0194564	UUGGCAC	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr1_-_135430490_135430505	0.0193675	UUGGCAC	ENSMUST00000041023.7|Ipo9|ENSMUSG00000041879.7|importin 9
mm10_v2_chr11_-_121388186_121388267	0.0192287	UUGGCAC	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr15_-_93275151_93275178	0.0191916	UUGGCAC	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr15_-_66969616_66969647	0.0186156	UUGGCAC	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr3_-_132950043_132950291	0.0185862	UUGGCAC	ENSMUST00000117164.1|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000093971.4|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000042729.9|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000042744.9|Npnt|ENSMUSG00000040998.12|nephronectin 	ENSMUST00000117811.1|Npnt|ENSMUSG00000040998.12|nephronectin
mm10_v2_chr10_+_58394361_58394380	0.0185797	UUGGCAC	ENSMUST00000020077.4|Lims1|ENSMUSG00000019920.11|LIM and senescent cell antigen-like domains 1
mm10_v2_chr11_-_95309557_95309602	0.0185194	UUGGCAC	ENSMUST00000092766.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000072621.5|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr16_+_27388869_27388980	0.0179864	UUGGCAC	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr11_-_50431101_50431131	0.0178054	UUGGCAC	ENSMUST00000020643.3|Rufy1|ENSMUSG00000020375.3|RUN and FYVE domain containing 1
mm10_v2_chr19_+_5068077_5068085	0.0175139	UUGGCAC	ENSMUST00000070630.6|Cd248|ENSMUSG00000056481.6|CD248 antigen, endosialin
mm10_v2_chr4_-_43562397_43562430	0.0175129	UUGGCAC	ENSMUST00000030187.7|Tln1|ENSMUSG00000028465.10|talin 1
mm10_v2_chr5_+_67306941_67306977	0.0175103	UUGGCAC	ENSMUST00000162372.1|Slc30a9|ENSMUSG00000029221.9|solute carrier family 30 (zinc transporter), member 9 	ENSMUST00000113676.2|Slc30a9|ENSMUSG00000029221.9|solute carrier family 30 (zinc transporter), member 9
mm10_v2_chr8_-_104443001_104443047	0.0174876	UUGGCAC	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr8_-_4325096_4325110	0.0174552	UUGGCAC	ENSMUST00000098950.4|Elavl1|ENSMUSG00000040028.9|ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
mm10_v2_chr2_+_167932327_167932379	0.0173225	UUGGCAC	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr11_+_121259983_121260055	0.0172987	UUGGCAC	ENSMUST00000106113.1|Foxk2|ENSMUSG00000039275.9|forkhead box K2
mm10_v2_chr10_-_130280218_130280242	0.0172867	UUGGCAC	ENSMUST00000061571.3|Neurod4|ENSMUSG00000048015.3|neurogenic differentiation 4
mm10_v2_chr13_+_119428888_119428960	0.0170859	UUGGCAC	ENSMUST00000026520.7|Paip1|ENSMUSG00000025451.9|polyadenylate binding protein-interacting protein 1
mm10_v2_chr1_-_16619437_16619489	0.0169996	UUGGCAC	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr7_-_123369870_123369920	0.0166965	UUGGCAC	ENSMUST00000106442.2|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17 	ENSMUST00000098060.3|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17 	ENSMUST00000167309.1|Arhgap17|ENSMUSG00000030766.9|Rho GTPase activating protein 17
mm10_v2_chrX_-_12762069_12762080	0.0161852	UUGGCAC	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr16_-_55934845_55934868	0.0155068	UUGGCAC	ENSMUST00000121129.1|Cep97|ENSMUSG00000022604.12|centrosomal protein 97 	ENSMUST00000023270.7|Cep97|ENSMUSG00000022604.12|centrosomal protein 97
mm10_v2_chr2_+_138256530_138256615	0.0152335	UUGGCAC	ENSMUST00000091556.5|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr2_-_152415044_152415044	0.0147377	UUGGCAC	ENSMUST00000099207.3|Zcchc3|ENSMUSG00000074682.3|zinc finger, CCHC domain containing 3
mm10_v2_chrX_-_108834303_108834381	0.0142157	UUGGCAC	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr7_+_67952817_67952859	0.0139286	UUGGCAC	ENSMUST00000005671.8|Igf1r|ENSMUSG00000005533.9|insulin-like growth factor I receptor
mm10_v2_chr15_-_96460838_96460856	0.0137101	UUGGCAC	ENSMUST00000047835.6|Scaf11|ENSMUSG00000033228.7|SR-related CTD-associated factor 11
mm10_v2_chr13_-_81710937_81711013	0.0135836	UUGGCAC	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr8_-_109737714_109737786	0.0133597	UUGGCAC	ENSMUST00000093162.3|Atxn1l|ENSMUSG00000069895.3|ataxin 1-like
mm10_v2_chr4_-_154636831_154636873	0.0127572	UUGGCAC	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr19_-_46045194_46045222	0.0127527	UUGGCAC	ENSMUST00000156585.1|Ldb1|ENSMUSG00000025223.8|LIM domain binding 1 	ENSMUST00000152946.1|Ldb1|ENSMUSG00000025223.8|LIM domain binding 1
mm10_v2_chr6_-_72235559_72235618	0.0126199	UUGGCAC	ENSMUST00000042646.7|Atoh8|ENSMUSG00000037621.7|atonal homolog 8 (Drosophila)
mm10_v2_chr9_+_73044833_73044864	0.0124763	UUGGCAC	ENSMUST00000184146.1|Rab27a|ENSMUSG00000032202.5|RAB27A, member RAS oncogene family 	ENSMUST00000034722.4|Rab27a|ENSMUSG00000032202.5|RAB27A, member RAS oncogene family
mm10_v2_chr2_-_174472949_174473081	0.012304	UUGGCAC	ENSMUST00000016401.8|Slmo2|ENSMUSG00000016257.9|slowmo homolog 2 (Drosophila)
mm10_v2_chr10_-_117376955_117376978	0.0122183	UUGGCAC	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr6_-_146577825_146577839	0.0117678	UUGGCAC	ENSMUST00000032427.8|Asun|ENSMUSG00000040250.8|asunder, spermatogenesis regulator
mm10_v2_chr2_+_37452231_37452286	0.011607	UUGGCAC	ENSMUST00000148470.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000066055.3|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000112920.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chrX_+_52912232_52912361	0.0111851	UUGGCAC	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr11_+_72607221_72607307	0.0111757	UUGGCAC	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr8_-_64849818_64849861	0.0110822	UUGGCAC	ENSMUST00000034017.7|Klhl2|ENSMUSG00000031605.7|kelch-like 2, Mayven
mm10_v2_chr12_+_78226627_78226655	0.0109666	UUGGCAC	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr2_+_65845767_65845799	0.0109449	UUGGCAC	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr11_-_98193260_98193298	0.0108883	UUGGCAC	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr3_+_98382438_98382520	0.0108596	UUGGCAC	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr5_-_3803081_3803119	0.0104226	UUGGCAC	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr7_-_4501636_4501711	0.0101096	UUGGCAC	ENSMUST00000013886.8|Ppp1r12c|ENSMUSG00000019254.10|protein phosphatase 1, regulatory (inhibitor) subunit 12C
mm10_v2_chr11_-_103412668_103412711	0.0097489	UUGGCAC	ENSMUST00000041272.9|Plekhm1|ENSMUSG00000034247.9|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm10_v2_chr9_-_27030010_27030114	0.0096626	UUGGCAC	ENSMUST00000034470.9|Vps26b|ENSMUSG00000031988.9|vacuolar protein sorting 26 homolog B (yeast)
mm10_v2_chr2_+_30364227_30364260	0.00949977	UUGGCAC	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr15_-_28025834_28025879	0.00925011	UUGGCAC	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr3_-_9004686_9004750	0.00920725	UUGGCAC	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr9_-_103364970_103364996	0.00894812	UUGGCAC	ENSMUST00000116517.2|Cdv3|ENSMUSG00000032803.8|carnitine deficiency-associated gene expressed in ventricle 3
mm10_v2_chr10_+_62980233_62980262	0.00864519	UUGGCAC	ENSMUST00000131718.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000119567.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000122231.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2
mm10_v2_chr11_+_111066154_111066174	0.00822432	UUGGCAC	ENSMUST00000042970.2|Kcnj2|ENSMUSG00000041695.2|potassium inwardly-rectifying channel, subfamily J, member 2
mm10_v2_chr11_+_60777525_60777563	0.00822352	UUGGCAC	ENSMUST00000056907.6|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) 	ENSMUST00000102667.3|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm10_v2_chr10_-_44458715_44458751	0.00818927	UUGGCAC	ENSMUST00000039174.4|Prdm1|ENSMUSG00000038151.6|PR domain containing 1, with ZNF domain
mm10_v2_chr2_-_126933229_126933241	0.00734904	UUGGCAC	ENSMUST00000028844.4|Sppl2a|ENSMUSG00000027366.6|signal peptide peptidase like 2A
mm10_v2_chr10_-_85127977_85128035	0.00731629	UUGGCAC	ENSMUST00000050813.2|Mterfd3|ENSMUSG00000049038.2|MTERF domain containing 3
mm10_v2_chr9_+_58823512_58823512	0.00711354	UUGGCAC	ENSMUST00000034889.8|Hcn4|ENSMUSG00000032338.8|hyperpolarization-activated, cyclic nucleotide-gated K+ 4
mm10_v2_chr8_-_79399513_79399532	0.00686831	UUGGCAC	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr2_-_167661496_167661591	0.00682027	UUGGCAC	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr19_-_17837620_17837642	0.00674799	UUGGCAC	ENSMUST00000025618.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5 	ENSMUST00000050715.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5
mm10_v2_chr13_+_49341549_49341623	0.00673264	UUGGCAC	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr8_+_47533639_47533709	0.0066969	UUGGCAC	ENSMUST00000033973.7|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A 	ENSMUST00000176379.1|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A
mm10_v2_chr15_+_80711292_80711340	0.00664774	UUGGCAC	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr14_+_26579535_26579612	0.00638238	UUGGCAC	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chrX_-_140543177_140543195	0.00613333	UUGGCAC	ENSMUST00000055738.5|Tsc22d3|ENSMUSG00000031431.7|TSC22 domain family, member 3
mm10_v2_chr16_+_17451981_17452034	0.00611897	UUGGCAC	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr4_-_141723401_141723436	0.00605371	UUGGCAC	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr1_+_33719863_33719901	0.00570953	UUGGCAC	ENSMUST00000088287.3|Rab23|ENSMUSG00000004768.8|RAB23, member RAS oncogene family
mm10_v2_chr10_+_108162358_108162408	0.00551436	UUGGCAC	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr16_+_8513429_8513497	0.00538673	UUGGCAC	ENSMUST00000065987.7|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase 	ENSMUST00000115838.1|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase 	ENSMUST00000115839.2|Abat|ENSMUSG00000057880.6|4-aminobutyrate aminotransferase
mm10_v2_chrX_-_136743675_136743692	0.00534977	UUGGCAC	ENSMUST00000166478.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113097.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr12_+_75818294_75818356	0.00528663	UUGGCAC	ENSMUST00000143031.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2 	ENSMUST00000044217.9|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2 	ENSMUST00000150317.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr14_-_65262391_65262490	0.00507431	UUGGCAC	ENSMUST00000131309.1|Fzd3|ENSMUSG00000007989.6|frizzled homolog 3 (Drosophila)
mm10_v2_chr7_-_144470714_144470770	0.00499824	UUGGCAC	ENSMUST00000033407.6|Cttn|ENSMUSG00000031078.9|cortactin
mm10_v2_chr1_+_179960472_179960585	0.00496136	UUGGCAC	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr2_-_72980402_72980471	0.00491847	UUGGCAC	ENSMUST00000066003.6|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3 	ENSMUST00000102689.3|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3
mm10_v2_chr17_-_31855782_31855802	0.00483434	UUGGCAC	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr11_+_97362396_97362551	0.00455867	UUGGCAC	ENSMUST00000045540.3|Socs7|ENSMUSG00000038485.5|suppressor of cytokine signaling 7
mm10_v2_chr19_+_27217357_27217424	0.00406169	UUGGCAC	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr5_+_135187251_135187269	0.0036776	UUGGCAC	ENSMUST00000002825.5|Baz1b|ENSMUSG00000002748.6|bromodomain adjacent to zinc finger domain, 1B
mm10_v2_chr5_+_93093428_93093457	0.00350614	UUGGCAC	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr15_-_97831460_97831519	0.00321659	UUGGCAC	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr11_-_116654245_116654325	0.00304803	UUGGCAC	ENSMUST00000021166.5|Cygb|ENSMUSG00000020810.5|cytoglobin
mm10_v2_chr11_+_109649376_109649437	0.00290014	UUGGCAC	ENSMUST00000106677.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr15_+_38661904_38661981	0.00266568	UUGGCAC	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr4_-_83052147_83052185	0.00256896	UUGGCAC	ENSMUST00000170248.2|Frem1|ENSMUSG00000059049.8|Fras1 related extracellular matrix protein 1
mm10_v2_chr9_+_27790947_27790991	0.00237759	UUGGCAC	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr1_-_133753681_133753857	0.00234615	UUGGCAC	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr19_-_44069736_44069787	0.00232046	UUGGCAC	ENSMUST00000172041.1|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1 	ENSMUST00000071698.6|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1 	ENSMUST00000112028.3|Erlin1|ENSMUSG00000025198.10|ER lipid raft associated 1
mm10_v2_chr12_+_3807017_3807063	0.00227745	UUGGCAC	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr3_+_108591279_108591414	0.00189667	UUGGCAC	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr14_+_121035538_121035575	0.00134892	UUGGCAC	ENSMUST00000026635.7|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr14_+_60378242_60378292	0.00134736	UUGGCAC	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chr11_+_98203059_98203059	0.00114168	UUGGCAC	ENSMUST00000107539.1|Cdk12|ENSMUSG00000003119.8|cyclin-dependent kinase 12
mm10_v2_chr8_+_119910792_119910857	0.000917551	UUGGCAC	ENSMUST00000108988.2|Usp10|ENSMUSG00000031826.13|ubiquitin specific peptidase 10 	ENSMUST00000127664.1|Gm20388|ENSMUSG00000092329.1|predicted gene 20388 	ENSMUST00000108982.4|Usp10|ENSMUSG00000031826.13|ubiquitin specific peptidase 10
mm10_v2_chr3_+_95588928_95588953	0.000871535	UUGGCAC	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr9_-_119322421_119322449	0.000848758	UUGGCAC	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr2_-_66410064_66410134	0.00075172	UUGGCAC	ENSMUST00000112366.1|Scn1a|ENSMUSG00000064329.7|sodium channel, voltage-gated, type I, alpha
mm10_v2_chrX_+_42067836_42067872	0.000695822	UUGGCAC	ENSMUST00000115094.1|Xiap|ENSMUSG00000025860.8|X-linked inhibitor of apoptosis
mm10_v2_chr4_-_57143437_57143624	0.000598895	UUGGCAC	ENSMUST00000095076.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b 	ENSMUST00000030142.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b
mm10_v2_chr2_-_168734236_168734339	0.000513639	UUGGCAC	ENSMUST00000109175.2|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr12_-_111377705_111377719	0.000450166	UUGGCAC	ENSMUST00000041965.3|Cdc42bpb|ENSMUSG00000021279.4|CDC42 binding protein kinase beta
