mm10_v2_chr13_-_100786402_100786570	2.04656	Zkscan3	ENSMUST00000174038.1|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000091295.7|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000072119.8|Ccnb1|ENSMUSG00000041431.10|cyclin B1
mm10_v2_chr5_+_120649188_120649259	1.88434	Zkscan3	ENSMUST00000156722.1|Rasal1|ENSMUSG00000029602.5|RAS protein activator like 1 (GAP1 like)
mm10_v2_chr7_+_19518731_19518731	1.30914	Zkscan3	ENSMUST00000078908.4|Nkpd1|ENSMUSG00000060621.4|NTPase, KAP family P-loop domain containing 1
mm10_v2_chr5_-_100572192_100572245	1.28466	Zkscan3	ENSMUST00000031264.5|Plac8|ENSMUSG00000029322.6|placenta-specific 8
mm10_v2_chr11_-_75422586_75422701	1.03171	Zkscan3	ENSMUST00000138661.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000000769.7|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr1_-_65123108_65123214	0.979932	Zkscan3	ENSMUST00000050047.3|D630023F18Rik|ENSMUSG00000044816.4|RIKEN cDNA D630023F18 gene 	ENSMUST00000148020.1|D630023F18Rik|ENSMUSG00000044816.4|RIKEN cDNA D630023F18 gene
mm10_v2_chr16_-_38433145_38433175	0.774414	Zkscan3	ENSMUST00000002926.6|Pla1a|ENSMUSG00000002847.6|phospholipase A1 member A
mm10_v2_chr6_+_71199827_71199888	0.769992	Zkscan3	ENSMUST00000067492.7|Fabp1|ENSMUSG00000054422.7|fatty acid binding protein 1, liver
mm10_v2_chr8_+_106893616_106893696	0.74442	Zkscan3	ENSMUST00000047629.5|Cirh1a|ENSMUSG00000041438.7|cirrhosis, autosomal recessive 1A (human)
mm10_v2_chr12_+_112588753_112588842	0.669785	Zkscan3	ENSMUST00000101029.2|Inf2|ENSMUSG00000037679.8|inverted formin, FH2 and WH2 domain containing
mm10_v2_chr8_+_70616816_70616930	0.631917	Zkscan3	ENSMUST00000052437.3|Lrrc25|ENSMUSG00000049988.3|leucine rich repeat containing 25
mm10_v2_chr1_+_132298606_132298631	0.62992	Zkscan3	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr19_-_10869757_10869940	0.629174	Zkscan3	ENSMUST00000120524.1|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A 	ENSMUST00000025645.7|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A
mm10_v2_chr14_+_51893610_51893677	0.590208	Zkscan3	ENSMUST00000047726.5|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2 	ENSMUST00000161888.1|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2
mm10_v2_chr13_-_32851176_32851186	0.544701	Zkscan3	ENSMUST00000091668.5|Serpinb1a|ENSMUSG00000044734.9|serine (or cysteine) peptidase inhibitor, clade B, member 1a 	ENSMUST00000076352.6|Serpinb1a|ENSMUSG00000044734.9|serine (or cysteine) peptidase inhibitor, clade B, member 1a
mm10_v2_chr13_-_38658991_38659038	0.533236	Zkscan3	ENSMUST00000001757.7|Eef1e1|ENSMUSG00000001707.7|eukaryotic translation elongation factor 1 epsilon 1
mm10_v2_chr11_-_75422524_75422561	0.527002	Zkscan3	ENSMUST00000125982.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000137103.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr3_+_79629074_79629115	0.476526	Zkscan3	ENSMUST00000029388.8|4930579G24Rik|ENSMUSG00000027811.8|RIKEN cDNA 4930579G24 gene
mm10_v2_chr11_-_100650693_100650749	0.47309	Zkscan3	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chrX_-_75874536_75874590	0.393511	Zkscan3	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr2_+_118772766_118772780	0.383949	Zkscan3	ENSMUST00000130293.1|Phgr1|ENSMUSG00000046804.7|proline/histidine/glycine-rich 1 	ENSMUST00000061360.3|Phgr1|ENSMUSG00000046804.7|proline/histidine/glycine-rich 1
mm10_v2_chr1_-_173333503_173333520	0.377906	Zkscan3	ENSMUST00000038227.4|Darc|ENSMUSG00000037872.4|Duffy blood group, chemokine receptor
mm10_v2_chr2_+_156613664_156613706	0.371624	Zkscan3	ENSMUST00000169464.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000109567.3|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr2_+_31670714_31670741	0.367413	Zkscan3	ENSMUST00000038474.7|Exosc2|ENSMUSG00000039356.9|exosome component 2 	ENSMUST00000137156.1|Exosc2|ENSMUSG00000039356.9|exosome component 2
mm10_v2_chr12_-_69724830_69724885	0.365216	Zkscan3	ENSMUST00000021370.8|L2hgdh|ENSMUSG00000020988.8|L-2-hydroxyglutarate dehydrogenase
mm10_v2_chr6_-_97459279_97459303	0.360282	Zkscan3	ENSMUST00000113359.1|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr5_+_122643878_122644009	0.299095	Zkscan3	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr11_-_88851462_88851522	0.293705	Zkscan3	ENSMUST00000107903.1|Akap1|ENSMUSG00000018428.9|A kinase (PRKA) anchor protein 1
mm10_v2_chr1_+_135232045_135232110	0.283422	Zkscan3	ENSMUST00000110798.3|Gm4204|ENSMUSG00000079139.3|predicted gene 4204
mm10_v2_chr13_+_73467197_73467316	0.278567	Zkscan3	ENSMUST00000022099.8|Lpcat1|ENSMUSG00000021608.8|lysophosphatidylcholine acyltransferase 1
mm10_v2_chr10_+_75568648_75568674	0.273233	Zkscan3	ENSMUST00000134503.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1 	ENSMUST00000125770.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1 	ENSMUST00000128886.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1 	ENSMUST00000151212.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1
mm10_v2_chr7_-_81345189_81345254	0.269673	Zkscan3	ENSMUST00000080813.4|Rps17|ENSMUSG00000061787.8|ribosomal protein S17
mm10_v2_chr17_-_34517352_34517352	0.264991	Zkscan3	ENSMUST00000075483.4|Btnl6|ENSMUSG00000058762.6|butyrophilin-like 6
mm10_v2_chr2_+_121295437_121295486	0.258703	Zkscan3	ENSMUST00000110639.1|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr17_-_35673517_35673700	0.258658	Zkscan3	ENSMUST00000162266.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160734.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000159852.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160039.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr7_+_19411086_19411101	0.256976	Zkscan3	ENSMUST00000003643.1|Ckm|ENSMUSG00000030399.1|creatine kinase, muscle
mm10_v2_chr8_+_31091593_31091650	0.234297	Zkscan3	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr7_+_126759601_126759651	0.226281	Zkscan3	ENSMUST00000050201.4|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3 	ENSMUST00000057669.9|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3
mm10_v2_chr9_+_114688782_114688813	0.212654	Zkscan3	ENSMUST00000047404.6|Dync1li1|ENSMUSG00000032435.8|dynein cytoplasmic 1 light intermediate chain 1
mm10_v2_chr18_+_67800101_67800147	0.208694	Zkscan3	ENSMUST00000025425.5|Cep192|ENSMUSG00000024542.8|centrosomal protein 192
mm10_v2_chr2_+_155775333_155775392	0.202851	Zkscan3	ENSMUST00000029141.5|Mmp24|ENSMUSG00000027612.7|matrix metallopeptidase 24
mm10_v2_chr17_-_34475937_34475937	0.202642	Zkscan3	ENSMUST00000065841.4|Btnl4|ENSMUSG00000058435.5|butyrophilin-like 4
mm10_v2_chr1_+_37997975_37998010	0.200004	Zkscan3	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr4_+_156026120_156026164	0.199694	Zkscan3	ENSMUST00000103173.3|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18
mm10_v2_chr4_+_156026304_156026371	0.19722	Zkscan3	ENSMUST00000040274.7|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18 	ENSMUST00000122001.1|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18
mm10_v2_chr6_-_122856151_122856163	0.193339	Zkscan3	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr11_+_87405049_87405113	0.190755	Zkscan3	ENSMUST00000060835.5|Tex14|ENSMUSG00000010342.10|testis expressed gene 14
mm10_v2_chr6_+_127453667_127453685	0.18553	Zkscan3	ENSMUST00000112193.1|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr10_+_80629646_80629656	0.180497	Zkscan3	ENSMUST00000085435.5|Csnk1g2|ENSMUSG00000003345.9|casein kinase 1, gamma 2
mm10_v2_chr1_-_40790642_40790686	0.16884	Zkscan3	ENSMUST00000039672.5|Mfsd9|ENSMUSG00000041945.6|major facilitator superfamily domain containing 9
mm10_v2_chr2_-_30194112_30194143	0.160964	Zkscan3	ENSMUST00000113659.1|Ccbl1|ENSMUSG00000039648.8|cysteine conjugate-beta lyase 1 	ENSMUST00000113660.1|Ccbl1|ENSMUSG00000039648.8|cysteine conjugate-beta lyase 1
mm10_v2_chr7_+_101896340_101896431	0.155669	Zkscan3	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr9_+_108648720_108648840	0.149353	Zkscan3	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr13_-_104109576_104109619	0.139117	Zkscan3	ENSMUST00000109315.3|Nln|ENSMUSG00000021710.10|neurolysin (metallopeptidase M3 family)
mm10_v2_chr1_+_131638485_131638496	0.135412	Zkscan3	ENSMUST00000112411.1|Ctse|ENSMUSG00000004552.10|cathepsin E
mm10_v2_chr17_+_46110982_46111022	0.135385	Zkscan3	ENSMUST00000024763.3|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A 	ENSMUST00000123646.1|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A
mm10_v2_chr2_+_32646586_32646602	0.132381	Zkscan3	ENSMUST00000009705.7|Eng|ENSMUSG00000026814.10|endoglin 	ENSMUST00000167841.1|Eng|ENSMUSG00000026814.10|endoglin
mm10_v2_chr4_+_139192899_139192941	0.130509	Zkscan3	ENSMUST00000102508.3|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta 	ENSMUST00000131912.1|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta 	ENSMUST00000102507.3|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta
mm10_v2_chr6_+_125552948_125552980	0.125759	Zkscan3	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr10_-_33951190_33951263	0.123835	Zkscan3	ENSMUST00000048222.4|Zufsp|ENSMUSG00000039531.7|zinc finger with UFM1-specific peptidase domain
mm10_v2_chr7_-_98178254_98178274	0.121194	Zkscan3	ENSMUST00000040971.7|Capn5|ENSMUSG00000035547.8|calpain 5
mm10_v2_chr13_+_44730726_44730838	0.11731	Zkscan3	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr18_+_61105844_61105890	0.117	Zkscan3	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr1_+_131638306_131638338	0.115968	Zkscan3	ENSMUST00000073350.6|Ctse|ENSMUSG00000004552.10|cathepsin E
mm10_v2_chr7_-_127020321_127020336	0.114774	Zkscan3	ENSMUST00000032918.2|Pagr1a|ENSMUSG00000030680.3|PAXIP1 associated glutamate rich protein 1A
mm10_v2_chr8_-_70760889_70760953	0.101235	Zkscan3	ENSMUST00000038626.8|Mpv17l2|ENSMUSG00000035559.8|MPV17 mitochondrial membrane protein-like 2
mm10_v2_chr12_+_69724939_69724986	0.0961052	Zkscan3	ENSMUST00000021372.5|Atp5s|ENSMUSG00000054894.5|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s
mm10_v2_chr10_+_81328719_81328739	0.0948222	Zkscan3	ENSMUST00000105325.2|Tbxa2r|ENSMUSG00000034881.7|thromboxane A2 receptor
mm10_v2_chr16_-_16359016_16359040	0.0857914	Zkscan3	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr17_-_24150910_24150928	0.0844117	Zkscan3	ENSMUST00000052462.6|Pdpk1|ENSMUSG00000024122.10|3-phosphoinositide dependent protein kinase 1
mm10_v2_chr18_-_34651703_34651741	0.0835871	Zkscan3	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr8_-_106893515_106893545	0.0778609	Zkscan3	ENSMUST00000176090.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8
mm10_v2_chr10_+_75568630_75568639	0.0771171	Zkscan3	ENSMUST00000145928.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1
mm10_v2_chr14_-_32685246_32685312	0.0724569	Zkscan3	ENSMUST00000096038.3|3425401B19Rik|ENSMUSG00000071540.3|RIKEN cDNA 3425401B19 gene
mm10_v2_chr17_-_35673738_35673750	0.0717688	Zkscan3	ENSMUST00000001565.8|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr8_-_106893581_106893609	0.0622133	Zkscan3	ENSMUST00000176437.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000177068.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000169312.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000176515.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8
mm10_v2_chr11_-_102365111_102365280	0.0597423	Zkscan3	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr5_-_88675613_88675670	0.0513826	Zkscan3	ENSMUST00000113234.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1 	ENSMUST00000153565.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr10_+_89744988_89745022	0.0476242	Zkscan3	ENSMUST00000020112.5|Uhrf1bp1l|ENSMUSG00000019951.9|UHRF1 (ICBP90) binding protein 1-like
mm10_v2_chr3_-_95687846_95687917	0.0463789	Zkscan3	ENSMUST00000015994.3|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000148854.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000117782.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4
mm10_v2_chr8_-_111691002_111691019	0.0355266	Zkscan3	ENSMUST00000034435.5|Ctrb1|ENSMUSG00000031957.5|chymotrypsinogen B1
mm10_v2_chr5_+_117976761_117976803	0.0313505	Zkscan3	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr8_+_33732237_33732339	0.0306422	Zkscan3	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr19_+_6276725_6276792	0.0291663	Zkscan3	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr11_+_115912001_115912025	0.0245669	Zkscan3	ENSMUST00000132961.1|Smim6|ENSMUSG00000075420.6|small integral membrane protein 6
mm10_v2_chr8_+_71396853_71396891	0.0187555	Zkscan3	ENSMUST00000002473.8|Babam1|ENSMUSG00000031820.8|BRISC and BRCA1 A complex member 1
mm10_v2_chr10_+_75568641_75568645	0.00662061	Zkscan3	ENSMUST00000131565.1|Ggt1|ENSMUSG00000006345.4|gamma-glutamyltransferase 1
