mm39_v1_chr3_-_58792633_58792775	0.004298615504342124	AUGACAC	ENSMUST00000055636.13|Clrn1|ENSMUSG00000043850.16|clarin 1	ENSMUST00000072551.7|Clrn1|ENSMUSG00000043850.16|clarin 1	ENSMUST00000051408.8|Clrn1|ENSMUSG00000043850.16|clarin 1
mm39_v1_chr7_+_25386418_25386436	0.004066341188902038	AUGACAC	ENSMUST00000002678.10|Tgfb1|ENSMUSG00000002603.16|transforming growth factor, beta 1
mm39_v1_chr5_+_43390513_43390580	0.003654944412535027	AUGACAC	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr16_+_24212284_24212320	0.0032203552498390083	AUGACAC	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr14_-_21102487_21102592	0.0029400853494956905	AUGACAC	ENSMUST00000154460.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit	ENSMUST00000130291.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit
mm39_v1_chr14_-_30075424_30075492	0.002912632279946689	AUGACAC	ENSMUST00000224198.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000238675.2|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000112249.10|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000224785.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm39_v1_chr11_+_87959067_87959115	0.0028856798938348065	AUGACAC	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr18_-_63825380_63825409	0.0026187900544889886	AUGACAC	ENSMUST00000025476.4|Txnl1|ENSMUSG00000024583.4|thioredoxin-like 1
mm39_v1_chr19_+_8797330_8797398	0.002613505072637516	AUGACAC	ENSMUST00000096753.5|Hnrnpul2|ENSMUSG00000071659.5|heterogeneous nuclear ribonucleoprotein U-like 2
mm39_v1_chr7_+_131568167_131568198	0.0020899827092585492	AUGACAC	ENSMUST00000045840.5|Gpr26|ENSMUSG00000040125.5|G protein-coupled receptor 26
mm39_v1_chr2_+_48839505_48839629	0.002016006039233578	AUGACAC	ENSMUST00000112745.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5	ENSMUST00000112754.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5
mm39_v1_chr5_-_100126773_100126833	0.0018686916604154168	AUGACAC	ENSMUST00000112939.10|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000171786.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000072750.13|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000019128.15|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000172361.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D
mm39_v1_chr6_-_128339775_128339889	0.0017507637969313991	AUGACAC	ENSMUST00000112152.8|Rhno1|ENSMUSG00000048668.17|RAD9-HUS1-RAD1 interacting nuclear orphan 1	ENSMUST00000057421.15|Rhno1|ENSMUSG00000048668.17|RAD9-HUS1-RAD1 interacting nuclear orphan 1	ENSMUST00000112151.2|Rhno1|ENSMUSG00000048668.17|RAD9-HUS1-RAD1 interacting nuclear orphan 1
mm39_v1_chr2_+_71042050_71042138	0.0017461532255162381	AUGACAC	ENSMUST00000112142.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112139.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112140.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112138.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2
mm39_v1_chr2_-_33321306_33321359	0.0016884827775366625	AUGACAC	ENSMUST00000113158.8|Zbtb34|ENSMUSG00000068966.11|zinc finger and BTB domain containing 34
mm39_v1_chr11_+_77384234_77384397	0.0016848643608121509	AUGACAC	ENSMUST00000037285.10|Git1|ENSMUSG00000011877.14|GIT ArfGAP 1	ENSMUST00000100812.4|Git1|ENSMUSG00000011877.14|GIT ArfGAP 1
mm39_v1_chr11_-_86698484_86698572	0.0016647742245684111	AUGACAC	ENSMUST00000018569.14|Dhx40|ENSMUSG00000018425.19|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm39_v1_chr3_-_58433313_58433318	0.0016385017766640923	AUGACAC	ENSMUST00000029385.9|Serp1|ENSMUSG00000027808.9|stress-associated endoplasmic reticulum protein 1
mm39_v1_chr14_-_60324265_60324374	0.0016146799860718522	AUGACAC	ENSMUST00000080368.13|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr1_+_15382676_15382676	0.0015051773536667883	AUGACAC	ENSMUST00000170146.3|Kcnb2|ENSMUSG00000092083.5|potassium voltage gated channel, Shab-related subfamily, member 2
mm39_v1_chr19_-_46561532_46561646	0.001462216893491525	AUGACAC	ENSMUST00000026009.10|Arl3|ENSMUSG00000025035.10|ADP-ribosylation factor-like 3	ENSMUST00000236255.2|Arl3|ENSMUSG00000025035.10|ADP-ribosylation factor-like 3
mm39_v1_chr9_-_101128976_101129003	0.0014176991791567902	AUGACAC	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr2_-_104324745_104324809	0.0013428097825826572	AUGACAC	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr2_-_33358513_33358582	0.0012619121216480035	AUGACAC	ENSMUST00000113156.2|Zbtb43|ENSMUSG00000026788.14|zinc finger and BTB domain containing 43	ENSMUST00000028125.12|Zbtb43|ENSMUSG00000026788.14|zinc finger and BTB domain containing 43	ENSMUST00000126442.2|Zbtb43|ENSMUSG00000026788.14|zinc finger and BTB domain containing 43
mm39_v1_chr13_-_47259652_47259712	0.0011704574220648288	AUGACAC	ENSMUST00000021807.13|Dek|ENSMUSG00000021377.16|DEK proto-oncogene (DNA binding)	ENSMUST00000135278.8|Dek|ENSMUSG00000021377.16|DEK proto-oncogene (DNA binding)
mm39_v1_chr3_-_75464066_75464178	0.0010660526628324695	AUGACAC	ENSMUST00000162138.2|Pdcd10|ENSMUSG00000027835.12|programmed cell death 10	ENSMUST00000029424.12|Pdcd10|ENSMUSG00000027835.12|programmed cell death 10	ENSMUST00000161137.8|Pdcd10|ENSMUSG00000027835.12|programmed cell death 10
mm39_v1_chr15_+_55171138_55171158	0.0008700914216535463	AUGACAC	ENSMUST00000023053.12|Col14a1|ENSMUSG00000022371.17|collagen, type XIV, alpha 1	ENSMUST00000110217.10|Col14a1|ENSMUSG00000022371.17|collagen, type XIV, alpha 1
mm39_v1_chr11_+_53241561_53241660	0.0008661571249905255	AUGACAC	ENSMUST00000060945.12|Aff4|ENSMUSG00000049470.14|AF4/FMR2 family, member 4
mm39_v1_chr19_-_10502468_10502545	0.0007790095826439195	AUGACAC	ENSMUST00000025570.8|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2	ENSMUST00000236455.2|Sdhaf2|ENSMUSG00000024668.9|succinate dehydrogenase complex assembly factor 2
mm39_v1_chr9_+_100956734_100956815	0.0007400495310963511	AUGACAC	ENSMUST00000085177.5|Msl2|ENSMUSG00000066415.5|MSL complex subunit 2
mm39_v1_chr19_+_41471067_41471128	0.0006914158581020684	AUGACAC	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr13_-_12121831_12121871	0.0005965680721370628	AUGACAC	ENSMUST00000021750.15|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000170156.3|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000220597.2|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac
mm39_v1_chr13_+_118851214_118851238	0.000581323231269692	AUGACAC	ENSMUST00000022246.9|Fgf10|ENSMUSG00000021732.15|fibroblast growth factor 10
mm39_v1_chr4_+_129714494_129714503	0.0005777558215056752	AUGACAC	ENSMUST00000165853.2|Ptp4a2|ENSMUSG00000028788.15|protein tyrosine phosphatase 4a2
mm39_v1_chrX_-_87159237_87159281	0.0004933565513781608	AUGACAC	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr6_-_131365380_131365451	0.0004681530194016163	AUGACAC	ENSMUST00000032309.13|Ybx3|ENSMUSG00000030189.16|Y box protein 3	ENSMUST00000087865.4|Ybx3|ENSMUSG00000030189.16|Y box protein 3
mm39_v1_chr13_+_19132375_19132587	0.00043611279163979154	AUGACAC	ENSMUST00000239207.2|Amph|ENSMUSG00000021314.14|amphiphysin	ENSMUST00000003345.10|Amph|ENSMUSG00000021314.14|amphiphysin	ENSMUST00000200466.5|Amph|ENSMUSG00000021314.14|amphiphysin
mm39_v1_chr15_-_71599664_71599697	0.0004320570193787596	AUGACAC	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr2_+_107120934_107121005	0.00043195059129123766	AUGACAC	ENSMUST00000037012.3|Kcna4|ENSMUSG00000042604.6|potassium voltage-gated channel, shaker-related subfamily, member 4
mm39_v1_chr2_-_20973692_20973768	0.0003120831548514292	AUGACAC	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr9_+_65816206_65816302	0.00030830414090935837	AUGACAC	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr7_-_35096133_35096261	0.0002774021452690822	AUGACAC	ENSMUST00000154597.2|Faap24|ENSMUSG00000030493.14|Fanconi anemia core complex associated protein 24	ENSMUST00000032704.12|Faap24|ENSMUSG00000030493.14|Fanconi anemia core complex associated protein 24
mm39_v1_chr1_+_19279138_19279176	0.0002669643737074538	AUGACAC	ENSMUST00000027059.11|Tfap2b|ENSMUSG00000025927.14|transcription factor AP-2 beta
mm39_v1_chr11_-_116545071_116545151	0.00024972930662336875	AUGACAC	ENSMUST00000021166.6|Cygb|ENSMUSG00000020810.6|cytoglobin
mm39_v1_chr10_+_69369590_69369603	0.00023146828398207437	AUGACAC	ENSMUST00000182884.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr3_-_157742267_157742283	0.00019902885996980117	AUGACAC	ENSMUST00000121326.8|Srsf11|ENSMUSG00000055436.19|serine and arginine-rich splicing factor 11
mm39_v1_chr1_+_57814001_57814114	0.00018310033732165027	AUGACAC	ENSMUST00000167085.8|Spats2l|ENSMUSG00000038305.16|spermatogenesis associated, serine-rich 2-like
mm39_v1_chr15_+_54609011_54609098	0.0001575043411039705	AUGACAC	ENSMUST00000050027.9|Ccn3|ENSMUSG00000037362.9|cellular communication network factor 3
mm39_v1_chr11_-_34158085_34158092	0.00015435832444816276	AUGACAC	ENSMUST00000060271.3|Foxi1|ENSMUSG00000047861.3|forkhead box I1
mm39_v1_chr7_+_107166653_107166668	0.00011328381187193575	AUGACAC	ENSMUST00000120990.2|Olfml1|ENSMUSG00000051041.9|olfactomedin-like 1
mm39_v1_chr14_-_4808744_4808823	0.00010139703579476553	AUGACAC	ENSMUST00000022303.17|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta	ENSMUST00000091471.12|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chr11_+_72498029_72498133	9.034794466618101e-05	AUGACAC	ENSMUST00000021148.13|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1	ENSMUST00000138247.8|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1
mm39_v1_chr13_+_9143995_9144018	8.330432034041657e-05	AUGACAC	ENSMUST00000091829.4|Larp4b|ENSMUSG00000033499.15|La ribonucleoprotein domain family, member 4B
mm39_v1_chr8_-_88531018_88531067	7.064372329006655e-05	AUGACAC	ENSMUST00000165770.9|Zfp423|ENSMUSG00000045333.16|zinc finger protein 423
mm39_v1_chr19_+_56276343_56276371	3.425149972832202e-05	AUGACAC	ENSMUST00000095948.11|Habp2|ENSMUSG00000025075.15|hyaluronic acid binding protein 2
