mm39_v1_chr14_+_48358267_48358285	0.36270138976014815	AUGGCUU	ENSMUST00000073150.6|Peli2|ENSMUSG00000021846.10|pellino 2
mm39_v1_chr13_-_40887244_40887313	0.2869799482041503	AUGGCUU	ENSMUST00000110193.9|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr7_+_43959637_43959677	0.28474715962167635	AUGGCUU	ENSMUST00000107938.8|Shank1|ENSMUSG00000038738.16|SH3 and multiple ankyrin repeat domains 1
mm39_v1_chr13_+_54519161_54519173	0.2829138287234173	AUGGCUU	ENSMUST00000026985.9|Cplx2|ENSMUSG00000025867.9|complexin 2
mm39_v1_chr11_+_68979332_68979380	0.2806283673814877	AUGGCUU	ENSMUST00000117780.2|Vamp2|ENSMUSG00000020894.17|vesicle-associated membrane protein 2
mm39_v1_chr16_+_37909363_37909426	0.2759643830982185	AUGGCUU	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr7_+_27878894_27878960	0.24010775527025344	AUGGCUU	ENSMUST00000085901.13|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	ENSMUST00000172761.8|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm39_v1_chr15_-_58953838_58953867	0.23869263831263438	AUGGCUU	ENSMUST00000080371.8|Mtss1|ENSMUSG00000022353.11|MTSS I-BAR domain containing 1
mm39_v1_chr6_-_39183712_39183769	0.2259044174543756	AUGGCUU	ENSMUST00000002305.9|Kdm7a|ENSMUSG00000042599.9|lysine (K)-specific demethylase 7A
mm39_v1_chrX_+_7688528_7688528	0.21633187390562159	AUGGCUU	ENSMUST00000009875.5|Kcnd1|ENSMUSG00000009731.5|potassium voltage-gated channel, Shal-related family, member 1
mm39_v1_chr1_-_133728779_133728805	0.20838418923902846	AUGGCUU	ENSMUST00000143567.8|Atp2b4|ENSMUSG00000026463.18|ATPase, Ca++ transporting, plasma membrane 4
mm39_v1_chr11_+_98828495_98828559	0.19769409538590377	AUGGCUU	ENSMUST00000107475.9|Rara|ENSMUSG00000037992.17|retinoic acid receptor, alpha	ENSMUST00000068133.10|Rara|ENSMUSG00000037992.17|retinoic acid receptor, alpha
mm39_v1_chr8_+_36054919_36054981	0.18375330110499213	AUGGCUU	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr7_+_121666388_121666438	0.1770736117742789	AUGGCUU	ENSMUST00000033158.6|Ubfd1|ENSMUSG00000030870.13|ubiquitin family domain containing 1
mm39_v1_chr1_+_166828982_166828999	0.17478612539577917	AUGGCUU	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr9_+_43655230_43655318	0.16325213505215583	AUGGCUU	ENSMUST00000034510.9|Nectin1|ENSMUSG00000032012.10|nectin cell adhesion molecule 1
mm39_v1_chr1_-_162567919_162568103	0.16044401156793664	AUGGCUU	ENSMUST00000182331.2|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000183011.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182593.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182149.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C
mm39_v1_chr6_+_117145496_117145545	0.15807067831412852	AUGGCUU	ENSMUST00000112866.8|Cxcl12|ENSMUSG00000061353.12|chemokine (C-X-C motif) ligand 12	ENSMUST00000112871.8|Cxcl12|ENSMUSG00000061353.12|chemokine (C-X-C motif) ligand 12	ENSMUST00000073043.5|Cxcl12|ENSMUSG00000061353.12|chemokine (C-X-C motif) ligand 12
mm39_v1_chr14_-_30075424_30075492	0.15721868795095864	AUGGCUU	ENSMUST00000224198.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000238675.2|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000112249.10|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000224785.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm39_v1_chr9_+_108685555_108685640	0.15596814180258262	AUGGCUU	ENSMUST00000035218.9|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000195323.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000194819.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain
mm39_v1_chr3_-_119576911_119577037	0.1497079907782517	AUGGCUU	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr11_+_44508137_44508169	0.14431622199080463	AUGGCUU	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chrX_+_72716756_72716848	0.14280223147201337	AUGGCUU	ENSMUST00000033752.14|Slc6a8|ENSMUSG00000019558.15|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	ENSMUST00000114467.9|Slc6a8|ENSMUSG00000019558.15|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm39_v1_chr9_+_59658156_59658205	0.14150246344278405	AUGGCUU	ENSMUST00000136740.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000135298.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000128341.2|Myo9a|ENSMUSG00000039585.16|myosin IXa
mm39_v1_chr9_+_44410417_44410569	0.14036044073558362	AUGGCUU	ENSMUST00000074989.7|Bcl9l|ENSMUSG00000063382.7|B cell CLL/lymphoma 9-like	ENSMUST00000218913.2|Bcl9l|ENSMUSG00000063382.7|B cell CLL/lymphoma 9-like
mm39_v1_chr17_+_15163446_15163463	0.13475330262826224	AUGGCUU	ENSMUST00000052691.9|1600012H06Rik|ENSMUSG00000050088.10|RIKEN cDNA 1600012H06 gene
mm39_v1_chr15_+_85942928_85942981	0.13288852822675262	AUGGCUU	ENSMUST00000138134.8|Gramd4|ENSMUSG00000035900.19|GRAM domain containing 4
mm39_v1_chr16_+_51851588_51851705	0.13130073661417746	AUGGCUU	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr4_+_125384481_125384495	0.12514824410180167	AUGGCUU	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr9_+_109760528_109760554	0.1240332904447366	AUGGCUU	ENSMUST00000035055.15|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr5_+_130477642_130477671	0.12069987299619968	AUGGCUU	ENSMUST00000111288.4|Caln1|ENSMUSG00000060371.13|calneuron 1
mm39_v1_chr9_+_53448322_53448374	0.1172892186184763	AUGGCUU	ENSMUST00000035850.8|Npat|ENSMUSG00000033054.8|nuclear protein in the AT region
mm39_v1_chr8_-_84963653_84963694	0.11606383568738307	AUGGCUU	ENSMUST00000039480.7|Zswim4|ENSMUSG00000035671.7|zinc finger SWIM-type containing 4
mm39_v1_chr16_+_32882882_32882919	0.11336103994652764	AUGGCUU	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chr11_-_86248395_86248442	0.11324024496896525	AUGGCUU	ENSMUST00000043624.9|Med13|ENSMUSG00000034297.15|mediator complex subunit 13
mm39_v1_chr6_-_83418656_83418666	0.11219170247243491	AUGGCUU	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr10_+_56253418_56253434	0.110908124859739	AUGGCUU	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr4_-_126323291_126323349	0.10907487410337094	AUGGCUU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr4_-_141450710_141450747	0.10499843431231377	AUGGCUU	ENSMUST00000102484.5|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2	ENSMUST00000177592.2|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2
mm39_v1_chr1_-_125839897_125839951	0.1020458587804587	AUGGCUU	ENSMUST00000159417.2|Lypd1|ENSMUSG00000026344.10|Ly6/Plaur domain containing 1
mm39_v1_chr4_-_41569500_41569551	0.09956942962385015	AUGGCUU	ENSMUST00000108049.9|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108052.10|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108050.2|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A
mm39_v1_chr15_+_12205095_12205124	0.0952685885548891	AUGGCUU	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr14_+_47514368_47514406	0.09307078881764713	AUGGCUU	ENSMUST00000065562.6|Socs4|ENSMUSG00000048379.10|suppressor of cytokine signaling 4
mm39_v1_chr13_-_3968157_3968220	0.09229755002022524	AUGGCUU	ENSMUST00000223258.2|Net1|ENSMUSG00000021215.16|neuroepithelial cell transforming gene 1	ENSMUST00000091853.12|Net1|ENSMUSG00000021215.16|neuroepithelial cell transforming gene 1
mm39_v1_chr3_+_106455114_106455205	0.09228043110160515	AUGGCUU	ENSMUST00000067630.13|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000134396.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000121034.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000029507.13|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000144746.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000132923.8|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2	ENSMUST00000151465.2|Dram2|ENSMUSG00000027900.16|DNA-damage regulated autophagy modulator 2
mm39_v1_chr3_-_19365431_19365486	0.0919493062296759	AUGGCUU	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr3_-_133250129_133250174	0.09083230052115694	AUGGCUU	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr5_+_64960705_64960731	0.0906405261857497	AUGGCUU	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr11_+_95603494_95603529	0.0905229919793159	AUGGCUU	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr9_+_102885156_102885201	0.09042423243354393	AUGGCUU	ENSMUST00000035148.13|Slco2a1|ENSMUSG00000032548.15|solute carrier organic anion transporter family, member 2a1
mm39_v1_chr2_-_167191087_167191150	0.08943821779048007	AUGGCUU	ENSMUST00000109221.9|B4galt5|ENSMUSG00000017929.14|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm39_v1_chr18_-_15196612_15196675	0.08937885614041363	AUGGCUU	ENSMUST00000168989.9|Kctd1|ENSMUSG00000036225.16|potassium channel tetramerisation domain containing 1
mm39_v1_chr11_-_78056347_78056415	0.08936104531984937	AUGGCUU	ENSMUST00000017530.4|Traf4|ENSMUSG00000017386.11|TNF receptor associated factor 4
mm39_v1_chr9_-_95632387_95632421	0.08855266225818091	AUGGCUU	ENSMUST00000189137.7|Trpc1|ENSMUSG00000032839.14|transient receptor potential cation channel, subfamily C, member 1	ENSMUST00000053785.10|Trpc1|ENSMUSG00000032839.14|transient receptor potential cation channel, subfamily C, member 1
mm39_v1_chr7_+_24967094_24967148	0.0878657064159729	AUGGCUU	ENSMUST00000169266.8|Cic|ENSMUSG00000005442.14|capicua transcriptional repressor
mm39_v1_chr2_-_90900628_90900762	0.08587877450770082	AUGGCUU	ENSMUST00000111436.3|Slc39a13|ENSMUSG00000002105.16|solute carrier family 39 (metal ion transporter), member 13	ENSMUST00000073575.12|Slc39a13|ENSMUSG00000002105.16|solute carrier family 39 (metal ion transporter), member 13
mm39_v1_chr4_-_141412910_141412910	0.08553984143159281	AUGGCUU	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr7_+_4743114_4743205	0.08398513238371771	AUGGCUU	ENSMUST00000098853.9|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C	ENSMUST00000130215.8|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C	ENSMUST00000108582.10|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C	ENSMUST00000108583.9|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C
mm39_v1_chr8_-_106553822_106553982	0.08337028337729702	AUGGCUU	ENSMUST00000239468.2|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10	ENSMUST00000041400.6|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10
mm39_v1_chr1_+_131935342_131935373	0.08329089448342757	AUGGCUU	ENSMUST00000086556.12|Elk4|ENSMUSG00000026436.16|ELK4, member of ETS oncogene family
mm39_v1_chr4_-_34882917_34882964	0.08322788666712617	AUGGCUU	ENSMUST00000098163.9|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292	ENSMUST00000047950.6|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292
mm39_v1_chr11_-_69692542_69692683	0.08305819773321166	AUGGCUU	ENSMUST00000011285.11|Fgf11|ENSMUSG00000042826.14|fibroblast growth factor 11	ENSMUST00000102585.2|Fgf11|ENSMUSG00000042826.14|fibroblast growth factor 11
mm39_v1_chr8_-_125390107_125390122	0.08242862810803676	AUGGCUU	ENSMUST00000034464.8|2310022B05Rik|ENSMUSG00000031983.8|RIKEN cDNA 2310022B05 gene
mm39_v1_chr9_+_21077010_21077058	0.081894260708865	AUGGCUU	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr1_-_152642032_152642069	0.08136331735887511	AUGGCUU	ENSMUST00000111859.8|Rgl1|ENSMUSG00000026482.14|ral guanine nucleotide dissociation stimulator,-like 1
mm39_v1_chr8_-_17585263_17585335	0.08135882622673173	AUGGCUU	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr9_+_45029080_45029179	0.08134948675210577	AUGGCUU	ENSMUST00000170998.9|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta	ENSMUST00000093855.4|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta
mm39_v1_chr2_-_33321306_33321359	0.08004215978188468	AUGGCUU	ENSMUST00000113158.8|Zbtb34|ENSMUSG00000068966.11|zinc finger and BTB domain containing 34
mm39_v1_chr1_-_105284383_105284402	0.07596413584053849	AUGGCUU	ENSMUST00000058688.7|Rnf152|ENSMUSG00000047496.7|ring finger protein 152
mm39_v1_chr14_-_57983511_57983604	0.0755213146606336	AUGGCUU	ENSMUST00000173990.8|Lats2|ENSMUSG00000021959.17|large tumor suppressor 2	ENSMUST00000022531.14|Lats2|ENSMUSG00000021959.17|large tumor suppressor 2
mm39_v1_chr1_-_156767123_156767186	0.07530437183529969	AUGGCUU	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr18_+_7869066_7869229	0.07524489244300123	AUGGCUU	ENSMUST00000171486.8|Wac|ENSMUSG00000024283.16|WW domain containing adaptor with coiled-coil	ENSMUST00000170932.8|Wac|ENSMUSG00000024283.16|WW domain containing adaptor with coiled-coil	ENSMUST00000167020.8|Wac|ENSMUSG00000024283.16|WW domain containing adaptor with coiled-coil
mm39_v1_chr3_+_129326004_129326089	0.07451021806565425	AUGGCUU	ENSMUST00000199910.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000197070.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000071402.7|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr10_-_80413119_80413161	0.07422201650611303	AUGGCUU	ENSMUST00000038558.9|Klf16|ENSMUSG00000035397.9|Kruppel-like factor 16
mm39_v1_chr1_-_13442658_13442681	0.07366938662616129	AUGGCUU	ENSMUST00000081713.11|Ncoa2|ENSMUSG00000005886.15|nuclear receptor coactivator 2
mm39_v1_chr1_+_59802543_59802559	0.07354621071957067	AUGGCUU	ENSMUST00000087435.7|Bmpr2|ENSMUSG00000067336.7|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm39_v1_chrX_-_20816841_20816852	0.071634963274253	AUGGCUU	ENSMUST00000009550.14|Elk1|ENSMUSG00000009406.14|ELK1, member of ETS oncogene family
mm39_v1_chr7_+_28092370_28092418	0.07123602162172797	AUGGCUU	ENSMUST00000003529.9|Paf1|ENSMUSG00000003437.15|Paf1, RNA polymerase II complex component
mm39_v1_chr15_-_28025920_28025970	0.07071573032940416	AUGGCUU	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr5_-_135963408_135963467	0.07070553001252197	AUGGCUU	ENSMUST00000198270.2|Ywhag|ENSMUSG00000051391.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	ENSMUST00000055808.6|Ywhag|ENSMUSG00000051391.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm39_v1_chr8_+_107662352_107662410	0.07058541625765623	AUGGCUU	ENSMUST00000212524.2|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2	ENSMUST00000047425.5|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2
mm39_v1_chr8_+_85763534_85763566	0.0701628730202739	AUGGCUU	ENSMUST00000093360.12|Tnpo2|ENSMUSG00000031691.15|transportin 2 (importin 3, karyopherin beta 2b)
mm39_v1_chr16_+_17051423_17051528	0.06865460768031038	AUGGCUU	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr8_-_36716445_36716670	0.06841165928519045	AUGGCUU	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr8_-_71229293_71229361	0.0676531468436778	AUGGCUU	ENSMUST00000034296.15|Pik3r2|ENSMUSG00000031834.16|phosphoinositide-3-kinase regulatory subunit 2
mm39_v1_chr4_+_83443777_83443851	0.06677497269305158	AUGGCUU	ENSMUST00000053414.13|Ccdc171|ENSMUSG00000052407.18|coiled-coil domain containing 171	ENSMUST00000231339.2|Ccdc171|ENSMUSG00000052407.18|coiled-coil domain containing 171	ENSMUST00000126429.8|Ccdc171|ENSMUSG00000052407.18|coiled-coil domain containing 171
mm39_v1_chr5_-_21156766_21156824	0.06662776864682537	AUGGCUU	ENSMUST00000036489.10|Rsbn1l|ENSMUSG00000039968.10|round spermatid basic protein 1-like
mm39_v1_chr10_+_83379805_83379873	0.06604538185021441	AUGGCUU	ENSMUST00000038388.7|Washc4|ENSMUSG00000034560.7|WASH complex subunit 4
mm39_v1_chr9_+_8544143_8544224	0.06596020598844066	AUGGCUU	ENSMUST00000050433.8|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6	ENSMUST00000217462.2|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6
mm39_v1_chr1_+_34840785_34840875	0.06416318900248431	AUGGCUU	ENSMUST00000047664.16|Arhgef4|ENSMUSG00000037509.22|Rho guanine nucleotide exchange factor (GEF) 4	ENSMUST00000211073.2|SMIM39|ENSMUSG00000118272.2|novel protein
mm39_v1_chr2_+_37406630_37406647	0.06393147716551155	AUGGCUU	ENSMUST00000065441.7|Gpr21|ENSMUSG00000053164.7|G protein-coupled receptor 21
mm39_v1_chr17_-_88105422_88105476	0.06334193844079013	AUGGCUU	ENSMUST00000055221.9|Kcnk12|ENSMUSG00000050138.9|potassium channel, subfamily K, member 12
mm39_v1_chr2_-_179618439_179618458	0.0632137568001605	AUGGCUU	ENSMUST00000041618.13|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4	ENSMUST00000227325.2|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4
mm39_v1_chr9_-_106035308_106035331	0.06291841121945395	AUGGCUU	ENSMUST00000159809.2|Glyctk|ENSMUSG00000020258.17|glycerate kinase	ENSMUST00000162562.2|Glyctk|ENSMUSG00000020258.17|glycerate kinase	ENSMUST00000036382.13|Glyctk|ENSMUSG00000020258.17|glycerate kinase
mm39_v1_chr5_+_138083345_138083410	0.06201438654054944	AUGGCUU	ENSMUST00000019660.11|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000066617.12|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000110963.8|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1
mm39_v1_chr1_+_127701901_127701975	0.061454598712105374	AUGGCUU	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr11_+_67477347_67477366	0.06087522956108968	AUGGCUU	ENSMUST00000108682.9|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr2_-_167334746_167334812	0.06068525946051018	AUGGCUU	ENSMUST00000109211.9|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2	ENSMUST00000057627.16|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2
mm39_v1_chr16_-_97723753_97723833	0.0606684332438667	AUGGCUU	ENSMUST00000170757.3|C2cd2|ENSMUSG00000045975.9|C2 calcium-dependent domain containing 2
mm39_v1_chr16_-_13485986_13486045	0.06043324035147458	AUGGCUU	ENSMUST00000058884.10|Parn|ENSMUSG00000022685.10|poly(A)-specific ribonuclease (deadenylation nuclease)
mm39_v1_chr12_+_16944896_16944904	0.060004305111324326	AUGGCUU	ENSMUST00000020904.8|Rock2|ENSMUSG00000020580.11|Rho-associated coiled-coil containing protein kinase 2
mm39_v1_chr8_+_11808349_11808375	0.058701890149925204	AUGGCUU	ENSMUST00000074856.13|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)	ENSMUST00000098938.9|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)
mm39_v1_chr4_-_55532453_55532485	0.05839417559510559	AUGGCUU	ENSMUST00000132746.2|Klf4|ENSMUSG00000003032.9|Kruppel-like factor 4 (gut)	ENSMUST00000107619.3|Klf4|ENSMUSG00000003032.9|Kruppel-like factor 4 (gut)
mm39_v1_chr2_+_174485327_174485327	0.05832243248249957	AUGGCUU	ENSMUST00000059452.6|Zfp831|ENSMUSG00000050600.6|zinc finger protein 831
mm39_v1_chr7_+_18725170_18725244	0.058195343060045694	AUGGCUU	ENSMUST00000059331.9|Mypop|ENSMUSG00000048481.16|Myb-related transcription factor, partner of profilin	ENSMUST00000131087.2|Mypop|ENSMUSG00000048481.16|Myb-related transcription factor, partner of profilin
mm39_v1_chr19_+_29499671_29499682	0.05730654683831191	AUGGCUU	ENSMUST00000043610.13|Ric1|ENSMUSG00000038658.16|RAB6A GEF complex partner 1
mm39_v1_chr19_+_10666085_10666184	0.05729896809652698	AUGGCUU	ENSMUST00000237240.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235927.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000087951.7|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000237437.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235921.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C
mm39_v1_chr14_-_68362284_68362305	0.05707404403707156	AUGGCUU	ENSMUST00000111089.8|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide	ENSMUST00000022638.6|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide
mm39_v1_chr5_-_143166476_143166552	0.05547292693968815	AUGGCUU	ENSMUST00000049861.11|Rbak|ENSMUSG00000061898.11|RB-associated KRAB zinc finger	ENSMUST00000165318.4|Rbak|ENSMUSG00000061898.11|RB-associated KRAB zinc finger
mm39_v1_chr1_+_37338964_37339022	0.05521752206808325	AUGGCUU	ENSMUST00000027287.11|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I	ENSMUST00000140264.8|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I
mm39_v1_chr5_-_124465946_124466035	0.05496754802566466	AUGGCUU	ENSMUST00000031344.13|Mphosph9|ENSMUSG00000038126.18|M-phase phosphoprotein 9
mm39_v1_chr9_+_30941924_30941997	0.05477196291755917	AUGGCUU	ENSMUST00000216649.2|Zbtb44|ENSMUSG00000047412.17|zinc finger and BTB domain containing 44	ENSMUST00000115222.10|Zbtb44|ENSMUSG00000047412.17|zinc finger and BTB domain containing 44
mm39_v1_chr6_-_136150076_136150146	0.05466740467002152	AUGGCUU	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr2_-_9883391_9883418	0.05342794831647443	AUGGCUU	ENSMUST00000102976.4|Gata3|ENSMUSG00000015619.11|GATA binding protein 3
mm39_v1_chr7_-_46445305_46445508	0.05305488950755602	AUGGCUU	ENSMUST00000107653.8|Hps5|ENSMUSG00000014418.17|HPS5, biogenesis of lysosomal organelles complex 2 subunit 2	ENSMUST00000107654.8|Hps5|ENSMUSG00000014418.17|HPS5, biogenesis of lysosomal organelles complex 2 subunit 2	ENSMUST00000014562.14|Hps5|ENSMUSG00000014418.17|HPS5, biogenesis of lysosomal organelles complex 2 subunit 2	ENSMUST00000152759.8|Hps5|ENSMUSG00000014418.17|HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
mm39_v1_chr6_+_72324281_72324362	0.052647756301363945	AUGGCUU	ENSMUST00000077783.5|0610030E20Rik|ENSMUSG00000058706.6|RIKEN cDNA 0610030E20 gene
mm39_v1_chr18_-_10182007_10182092	0.05252682531974384	AUGGCUU	ENSMUST00000067947.7|Rock1|ENSMUSG00000024290.10|Rho-associated coiled-coil containing protein kinase 1
mm39_v1_chr3_+_96465265_96465284	0.052518750505050824	AUGGCUU	ENSMUST00000074519.13|Txnip|ENSMUSG00000038393.15|thioredoxin interacting protein	ENSMUST00000049093.8|Txnip|ENSMUSG00000038393.15|thioredoxin interacting protein
mm39_v1_chr8_-_61436249_61436353	0.05227930828925826	AUGGCUU	ENSMUST00000004430.14|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000110301.2|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000093490.9|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3
mm39_v1_chr10_+_126814542_126814618	0.051748807323694836	AUGGCUU	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr15_-_103248512_103248527	0.0515341246926497	AUGGCUU	ENSMUST00000168828.3|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr8_-_110464345_110464418	0.05129270403556551	AUGGCUU	ENSMUST00000212605.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000093162.4|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000212726.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like
mm39_v1_chr4_-_135749032_135749074	0.050105451751430524	AUGGCUU	ENSMUST00000030427.6|Eloa|ENSMUSG00000028668.6|elongin A
mm39_v1_chr15_+_78761360_78761396	0.050014848509212	AUGGCUU	ENSMUST00000041587.8|Gga1|ENSMUSG00000033128.10|golgi associated, gamma adaptin ear containing, ARF binding protein 1
mm39_v1_chr6_-_35516700_35516823	0.050009081681950694	AUGGCUU	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr2_-_154249997_154250034	0.049787402105456596	AUGGCUU	ENSMUST00000028991.7|Snta1|ENSMUSG00000027488.13|syntrophin, acidic 1	ENSMUST00000109728.8|Snta1|ENSMUSG00000027488.13|syntrophin, acidic 1
mm39_v1_chr5_+_88868714_88868734	0.048898623611623684	AUGGCUU	ENSMUST00000113229.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B	ENSMUST00000006424.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B
mm39_v1_chr10_-_127047396_127047502	0.04887920537103565	AUGGCUU	ENSMUST00000013970.9|Pip4k2c|ENSMUSG00000025417.9|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm39_v1_chr16_-_58343789_58343883	0.048046290867750543	AUGGCUU	ENSMUST00000137035.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	ENSMUST00000149456.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr15_+_10177709_10177741	0.04803709249547207	AUGGCUU	ENSMUST00000124470.8|Prlr|ENSMUSG00000005268.21|prolactin receptor
mm39_v1_chr2_-_181101158_181101232	0.04565768168310457	AUGGCUU	ENSMUST00000155535.2|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000029106.13|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000087409.10|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46
mm39_v1_chr2_-_126718129_126718191	0.04555900780462485	AUGGCUU	ENSMUST00000103224.10|Trpm7|ENSMUSG00000027365.15|transient receptor potential cation channel, subfamily M, member 7
mm39_v1_chr14_+_21549798_21549853	0.045228455928076075	AUGGCUU	ENSMUST00000182855.8|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000182405.9|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000069648.14|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B
mm39_v1_chr4_-_35157405_35157504	0.044668815180232455	AUGGCUU	ENSMUST00000102975.10|Mob3b|ENSMUSG00000073910.11|MOB kinase activator 3B
mm39_v1_chr10_-_127124718_127124787	0.04404556062807098	AUGGCUU	ENSMUST00000156208.2|Mbd6|ENSMUSG00000025409.15|methyl-CpG binding domain protein 6	ENSMUST00000026476.13|Mbd6|ENSMUSG00000025409.15|methyl-CpG binding domain protein 6
mm39_v1_chr10_-_121422635_121422708	0.04263935767822665	AUGGCUU	ENSMUST00000219493.2|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1	ENSMUST00000020316.4|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1
mm39_v1_chr3_+_153679073_153679162	0.042087968759903845	AUGGCUU	ENSMUST00000089948.6|Slc44a5|ENSMUSG00000028360.11|solute carrier family 44, member 5
mm39_v1_chr11_-_94212783_94212814	0.04206454860064061	AUGGCUU	ENSMUST00000166312.8|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)	ENSMUST00000107821.9|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)	ENSMUST00000021226.14|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)	ENSMUST00000107820.2|Luc7l3|ENSMUSG00000020863.16|LUC7-like 3 (S. cerevisiae)
mm39_v1_chr11_-_5331734_5331745	0.04189983477608186	AUGGCUU	ENSMUST00000172492.8|Znrf3|ENSMUSG00000041961.15|zinc and ring finger 3
mm39_v1_chr19_+_29229147_29229256	0.04043280803530118	AUGGCUU	ENSMUST00000025705.7|Jak2|ENSMUSG00000024789.14|Janus kinase 2	ENSMUST00000065796.10|Jak2|ENSMUSG00000024789.14|Janus kinase 2	ENSMUST00000236990.2|Jak2|ENSMUSG00000024789.14|Janus kinase 2
mm39_v1_chr18_-_61310066_61310129	0.0394862374306309	AUGGCUU	ENSMUST00000235480.2|Hmgxb3|ENSMUSG00000024622.9|HMG box domain containing 3	ENSMUST00000091884.6|Hmgxb3|ENSMUSG00000024622.9|HMG box domain containing 3
mm39_v1_chr4_+_139107911_139107998	0.03777700858273652	AUGGCUU	ENSMUST00000165860.8|Ubr4|ENSMUSG00000066036.15|ubiquitin protein ligase E3 component n-recognin 4	ENSMUST00000097822.10|Ubr4|ENSMUSG00000066036.15|ubiquitin protein ligase E3 component n-recognin 4
mm39_v1_chr6_-_38230890_38231089	0.03773418399431481	AUGGCUU	ENSMUST00000117556.8|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene	ENSMUST00000169256.5|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene
mm39_v1_chr9_-_36637670_36637904	0.03761943944063707	AUGGCUU	ENSMUST00000172702.9|Chek1|ENSMUSG00000032113.17|checkpoint kinase 1	ENSMUST00000172742.2|Chek1|ENSMUSG00000032113.17|checkpoint kinase 1
mm39_v1_chr4_-_70453140_70453224	0.03627114956580268	AUGGCUU	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr8_+_106002772_106002772	0.03622582057187434	AUGGCUU	ENSMUST00000014920.8|Nol3|ENSMUSG00000014776.8|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm39_v1_chr9_+_100956734_100956815	0.035629028960893094	AUGGCUU	ENSMUST00000085177.5|Msl2|ENSMUSG00000066415.5|MSL complex subunit 2
mm39_v1_chr19_+_55730696_55730774	0.03534992765819829	AUGGCUU	ENSMUST00000153888.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000127233.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000061496.17|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111656.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111657.11|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr11_-_86435579_86435631	0.03469504901530239	AUGGCUU	ENSMUST00000138810.3|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000058286.9|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000154617.8|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1
mm39_v1_chr7_-_121306476_121306685	0.03414118609467176	AUGGCUU	ENSMUST00000046929.7|Usp31|ENSMUSG00000063317.8|ubiquitin specific peptidase 31
mm39_v1_chr2_-_79959178_79959339	0.033952663157797595	AUGGCUU	ENSMUST00000102654.11|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent	ENSMUST00000102655.10|Pde1a|ENSMUSG00000059173.20|phosphodiesterase 1A, calmodulin-dependent
mm39_v1_chr4_-_34687381_34687453	0.03340625794916259	AUGGCUU	ENSMUST00000029970.14|Slc35a1|ENSMUSG00000028293.15|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm39_v1_chr9_+_121946321_121946401	0.0328111804891208	AUGGCUU	ENSMUST00000119215.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000146832.8|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000118886.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000120173.9|Snrk|ENSMUSG00000038145.18|SNF related kinase	ENSMUST00000139181.2|Snrk|ENSMUSG00000038145.18|SNF related kinase
mm39_v1_chr15_-_73056713_73056822	0.032543737856666845	AUGGCUU	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr9_-_42035560_42035631	0.03244022488819913	AUGGCUU	ENSMUST00000060989.9|Sorl1|ENSMUSG00000049313.9|sortilin-related receptor, LDLR class A repeats-containing
mm39_v1_chr1_-_173195236_173195261	0.03242247442703063	AUGGCUU	ENSMUST00000005470.5|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3	ENSMUST00000111220.8|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3
mm39_v1_chr11_+_95715295_95715376	0.032278572959036606	AUGGCUU	ENSMUST00000150134.2|Phospho1|ENSMUSG00000050860.7|phosphatase, orphan 1	ENSMUST00000054173.4|Phospho1|ENSMUSG00000050860.7|phosphatase, orphan 1
mm39_v1_chr14_+_69574623_69574647	0.03222150620364432	AUGGCUU	ENSMUST00000184973.8|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4	ENSMUST00000184314.8|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4
mm39_v1_chr15_-_64184485_64184537	0.03169789902850593	AUGGCUU	ENSMUST00000177083.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000177371.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr2_+_119803180_119803228	0.031221973407761547	AUGGCUU	ENSMUST00000066058.8|Mapkbp1|ENSMUSG00000033902.13|mitogen-activated protein kinase binding protein 1
mm39_v1_chr7_-_67022520_67022609	0.030941653499271124	AUGGCUU	ENSMUST00000156690.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000107476.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000076325.12|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000032776.15|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000133074.2|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A
mm39_v1_chr15_-_53209513_53209565	0.030797999059062723	AUGGCUU	ENSMUST00000077273.9|Ext1|ENSMUSG00000061731.10|exostosin glycosyltransferase 1
mm39_v1_chr6_-_38276157_38276225	0.03030261217294182	AUGGCUU	ENSMUST00000058524.3|Zc3hav1l|ENSMUSG00000047749.3|zinc finger CCCH-type, antiviral 1-like
mm39_v1_chr9_+_65816206_65816302	0.02980358591409319	AUGGCUU	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr11_+_94881861_94881916	0.029244507142218965	AUGGCUU	ENSMUST00000038696.12|Ppp1r9b|ENSMUSG00000038976.13|protein phosphatase 1, regulatory subunit 9B
mm39_v1_chrX_+_40490005_40490181	0.02910025643591435	AUGGCUU	ENSMUST00000115103.9|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)	ENSMUST00000076349.12|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm39_v1_chr19_+_44919585_44919613	0.028833652779395275	AUGGCUU	ENSMUST00000096053.5|Slf2|ENSMUSG00000036097.9|SMC5-SMC6 complex localization factor 2
mm39_v1_chr2_+_32178255_32178268	0.028448388668015526	AUGGCUU	ENSMUST00000239447.2|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000239474.2|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2	ENSMUST00000113377.8|Golga2|ENSMUSG00000002546.18|golgi autoantigen, golgin subfamily a, 2
mm39_v1_chr15_-_78004211_78004232	0.028257325614622186	AUGGCUU	ENSMUST00000019290.3|Cacng2|ENSMUSG00000019146.3|calcium channel, voltage-dependent, gamma subunit 2
mm39_v1_chr11_+_21041291_21041308	0.0277452401908005	AUGGCUU	ENSMUST00000093290.12|Peli1|ENSMUSG00000020134.14|pellino 1
mm39_v1_chr14_+_120715855_120715923	0.02719388973452112	AUGGCUU	ENSMUST00000062117.14|Rap2a|ENSMUSG00000051615.15|RAS related protein 2a
mm39_v1_chr7_+_24181416_24181501	0.02694592026493328	AUGGCUU	ENSMUST00000068023.8|Cadm4|ENSMUSG00000054793.9|cell adhesion molecule 4
mm39_v1_chr4_+_57845240_57845265	0.026825555385135726	AUGGCUU	ENSMUST00000102903.8|Pakap|ENSMUSG00000038729.25|paralemmin A kinase anchor protein	ENSMUST00000107598.9|Pakap|ENSMUSG00000038729.25|paralemmin A kinase anchor protein
mm39_v1_chr14_+_69792873_69792897	0.02670392844033936	AUGGCUU	ENSMUST00000185072.8|Entpd4b|ENSMUSG00000022066.17|ectonucleoside triphosphate diphosphohydrolase 4B	ENSMUST00000064846.8|Entpd4b|ENSMUSG00000022066.17|ectonucleoside triphosphate diphosphohydrolase 4B
mm39_v1_chr3_+_122039206_122039227	0.02639496624408196	AUGGCUU	ENSMUST00000029769.14|Gclm|ENSMUSG00000028124.16|glutamate-cysteine ligase, modifier subunit
mm39_v1_chr1_+_36107452_36107481	0.026063087585652896	AUGGCUU	ENSMUST00000088174.4|Hs6st1|ENSMUSG00000045216.8|heparan sulfate 6-O-sulfotransferase 1
mm39_v1_chr4_+_100926170_100926185	0.025533907633347584	AUGGCUU	ENSMUST00000106955.2|Raver2|ENSMUSG00000035275.15|ribonucleoprotein, PTB-binding 2	ENSMUST00000038463.15|Raver2|ENSMUSG00000035275.15|ribonucleoprotein, PTB-binding 2
mm39_v1_chr13_-_89890609_89890634	0.02545496020361417	AUGGCUU	ENSMUST00000109546.9|Vcan|ENSMUSG00000021614.17|versican
mm39_v1_chr18_+_21134302_21134398	0.025210493682549632	AUGGCUU	ENSMUST00000234107.2|Rnf138|ENSMUSG00000024317.16|ring finger protein 138	ENSMUST00000072847.12|Rnf138|ENSMUSG00000024317.16|ring finger protein 138
mm39_v1_chr16_+_87495792_87495872	0.024943444241910088	AUGGCUU	ENSMUST00000026703.6|Bach1|ENSMUSG00000025612.6|BTB and CNC homology 1, basic leucine zipper transcription factor 1
mm39_v1_chr16_+_49675969_49676120	0.024813892663571924	AUGGCUU	ENSMUST00000229101.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000230836.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000229206.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000084838.14|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	ENSMUST00000230281.2|Cd47|ENSMUSG00000055447.20|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm39_v1_chr5_-_136596299_136596390	0.023910369218505718	AUGGCUU	ENSMUST00000004097.16|Cux1|ENSMUSG00000029705.18|cut-like homeobox 1
mm39_v1_chr10_-_86334700_86334730	0.02329155623113781	AUGGCUU	ENSMUST00000120638.8|Syn3|ENSMUSG00000059602.15|synapsin III
mm39_v1_chr10_-_128237087_128237103	0.022687071213707527	AUGGCUU	ENSMUST00000042666.13|Slc39a5|ENSMUSG00000039878.14|solute carrier family 39 (metal ion transporter), member 5
mm39_v1_chr2_+_172187485_172187513	0.0225729009391494	AUGGCUU	ENSMUST00000028995.5|Fam210b|ENSMUSG00000027495.5|family with sequence similarity 210, member B
mm39_v1_chr19_-_3625698_3625756	0.022552950043511908	AUGGCUU	ENSMUST00000172362.3|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000025846.16|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000226109.2|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000113997.9|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3
mm39_v1_chr4_+_148888877_148888897	0.022090865332954682	AUGGCUU	ENSMUST00000094464.10|Casz1|ENSMUSG00000028977.18|castor zinc finger 1	ENSMUST00000122222.8|Casz1|ENSMUSG00000028977.18|castor zinc finger 1
mm39_v1_chr10_-_121146940_121147094	0.02188386785712538	AUGGCUU	ENSMUST00000064107.7|Tbc1d30|ENSMUSG00000052302.7|TBC1 domain family, member 30
mm39_v1_chr19_-_6899173_6899208	0.021851799111765532	AUGGCUU	ENSMUST00000025906.12|Esrra|ENSMUSG00000024955.16|estrogen related receptor, alpha	ENSMUST00000239322.2|Esrra|ENSMUSG00000024955.16|estrogen related receptor, alpha
mm39_v1_chr7_-_141649003_141649043	0.021428903679780672	AUGGCUU	ENSMUST00000039926.10|Dusp8|ENSMUSG00000037887.12|dual specificity phosphatase 8
mm39_v1_chrX_+_167819606_167819699	0.020919790316069845	AUGGCUU	ENSMUST00000087016.11|Arhgap6|ENSMUSG00000031355.17|Rho GTPase activating protein 6	ENSMUST00000112129.8|Arhgap6|ENSMUSG00000031355.17|Rho GTPase activating protein 6	ENSMUST00000112131.9|Arhgap6|ENSMUSG00000031355.17|Rho GTPase activating protein 6
mm39_v1_chrX_+_72546680_72546741	0.020916295880527017	AUGGCUU	ENSMUST00000033744.12|Atp2b3|ENSMUSG00000031376.16|ATPase, Ca++ transporting, plasma membrane 3	ENSMUST00000088429.8|Atp2b3|ENSMUSG00000031376.16|ATPase, Ca++ transporting, plasma membrane 3	ENSMUST00000114479.2|Atp2b3|ENSMUSG00000031376.16|ATPase, Ca++ transporting, plasma membrane 3
mm39_v1_chr2_-_169973076_169973140	0.020805446794157474	AUGGCUU	ENSMUST00000063710.13|Zfp217|ENSMUSG00000052056.15|zinc finger protein 217
mm39_v1_chr4_+_57637817_57637845	0.02072612485093224	AUGGCUU	ENSMUST00000150412.4|Pakap|ENSMUSG00000089945.14|paralemmin A kinase anchor protein
mm39_v1_chr14_-_60324265_60324374	0.02004360303732133	AUGGCUU	ENSMUST00000080368.13|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr9_-_70048766_70048860	0.0199663667195564	AUGGCUU	ENSMUST00000034749.16|Fam81a|ENSMUSG00000032224.16|family with sequence similarity 81, member A
mm39_v1_chr9_+_96001415_96001491	0.01994110043016961	AUGGCUU	ENSMUST00000085217.12|Gk5|ENSMUSG00000041440.19|glycerol kinase 5 (putative)	ENSMUST00000122383.3|Gk5|ENSMUSG00000041440.19|glycerol kinase 5 (putative)
mm39_v1_chr4_-_155306992_155307049	0.0192393482040558	AUGGCUU	ENSMUST00000084103.10|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)	ENSMUST00000030917.6|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)
mm39_v1_chr2_+_129642371_129642493	0.018992442645119952	AUGGCUU	ENSMUST00000165413.9|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35	ENSMUST00000166282.3|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35
mm39_v1_chr11_+_101066867_101066867	0.018843076874684065	AUGGCUU	ENSMUST00000103109.4|Cntnap1|ENSMUSG00000017167.7|contactin associated protein-like 1
mm39_v1_chr6_+_55428963_55429042	0.01791943958252494	AUGGCUU	ENSMUST00000070736.12|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1	ENSMUST00000070756.12|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1	ENSMUST00000166962.8|Adcyap1r1|ENSMUSG00000029778.13|adenylate cyclase activating polypeptide 1 receptor 1
mm39_v1_chr18_-_73836810_73836877	0.01782195873069862	AUGGCUU	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr14_+_30201569_30201642	0.01724310763042924	AUGGCUU	ENSMUST00000022535.9|Dcp1a|ENSMUSG00000021962.10|decapping mRNA 1A	ENSMUST00000223658.2|Dcp1a|ENSMUSG00000021962.10|decapping mRNA 1A
mm39_v1_chr12_-_4527138_4527196	0.01662665359270282	AUGGCUU	ENSMUST00000085814.5|Ncoa1|ENSMUSG00000020647.11|nuclear receptor coactivator 1
mm39_v1_chr11_+_117006020_117006083	0.01651225960575454	AUGGCUU	ENSMUST00000103026.10|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1	ENSMUST00000090433.6|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1
mm39_v1_chrX_-_142716200_142716307	0.016367087915357233	AUGGCUU	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr11_+_35660288_35660311	0.01607754239274507	AUGGCUU	ENSMUST00000018990.8|Pank3|ENSMUSG00000018846.9|pantothenate kinase 3
mm39_v1_chr19_+_43678109_43678133	0.015562628890894532	AUGGCUU	ENSMUST00000081079.6|Entpd7|ENSMUSG00000025192.14|ectonucleoside triphosphate diphosphohydrolase 7
mm39_v1_chr2_+_32617671_32617727	0.01444821039213054	AUGGCUU	ENSMUST00000113242.5|Sh2d3c|ENSMUSG00000059013.13|SH2 domain containing 3C
mm39_v1_chr18_+_44513547_44513644	0.01434148036564748	AUGGCUU	ENSMUST00000202306.2|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2	ENSMUST00000025350.10|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2
mm39_v1_chr17_+_26028059_26028146	0.013875236846421555	AUGGCUU	ENSMUST00000045692.9|Fbxl16|ENSMUSG00000025738.9|F-box and leucine-rich repeat protein 16
mm39_v1_chr4_-_9643636_9643717	0.013789921069888082	AUGGCUU	ENSMUST00000108333.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108334.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108335.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000152526.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000103004.10|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase
mm39_v1_chr6_-_100264439_100264461	0.013419753907594102	AUGGCUU	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr2_-_160714473_160714542	0.013152951390322848	AUGGCUU	ENSMUST00000103111.9|Zhx3|ENSMUSG00000035877.18|zinc fingers and homeoboxes 3
mm39_v1_chr1_+_178146689_178146703	0.013145822673757999	AUGGCUU	ENSMUST00000027781.7|Cox20|ENSMUSG00000026500.7|cytochrome c oxidase assembly protein 20
mm39_v1_chr3_-_69034425_69034446	0.01312357916720667	AUGGCUU	ENSMUST00000194558.6|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4	ENSMUST00000029353.9|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4
mm39_v1_chr16_-_94798509_94798562	0.012874763692068091	AUGGCUU	ENSMUST00000095873.12|Kcnj6|ENSMUSG00000043301.17|potassium inwardly-rectifying channel, subfamily J, member 6	ENSMUST00000099508.4|Kcnj6|ENSMUSG00000043301.17|potassium inwardly-rectifying channel, subfamily J, member 6
mm39_v1_chr7_-_131012202_131012250	0.012874315069664657	AUGGCUU	ENSMUST00000207243.2|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000128432.3|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000121033.8|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000046306.15|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5
mm39_v1_chr19_-_18978463_18978483	0.01285210805141996	AUGGCUU	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr11_+_75541324_75541370	0.012838057486489349	AUGGCUU	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr7_+_49559859_49559894	0.012830873575239777	AUGGCUU	ENSMUST00000056442.12|Slc6a5|ENSMUSG00000039728.16|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm39_v1_chr4_+_115696388_115696441	0.012811572158709612	AUGGCUU	ENSMUST00000019677.12|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000144427.8|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000106513.10|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000130819.8|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000151203.8|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000140315.2|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1
mm39_v1_chr2_-_33530492_33530620	0.012542955583311336	AUGGCUU	ENSMUST00000176067.2|Lmx1b|ENSMUSG00000038765.15|LIM homeobox transcription factor 1 beta	ENSMUST00000239476.2|Lmx1b|ENSMUSG00000038765.15|LIM homeobox transcription factor 1 beta	ENSMUST00000041730.12|Lmx1b|ENSMUSG00000038765.15|LIM homeobox transcription factor 1 beta
mm39_v1_chr17_+_55752485_55752551	0.01220738623910316	AUGGCUU	ENSMUST00000025000.4|St6gal2|ENSMUSG00000024172.11|beta galactoside alpha 2,6 sialyltransferase 2
mm39_v1_chr19_-_32365862_32365912	0.012015424065894165	AUGGCUU	ENSMUST00000099514.10|Sgms1|ENSMUSG00000040451.19|sphingomyelin synthase 1
mm39_v1_chr2_-_37537224_37537297	0.011264616410734195	AUGGCUU	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr18_+_64387428_64387457	0.011222206324736795	AUGGCUU	ENSMUST00000025477.15|St8sia3|ENSMUSG00000056812.15|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm39_v1_chr15_+_103148824_103148921	0.010820079821455296	AUGGCUU	ENSMUST00000036004.16|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000087351.9|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000231141.2|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1
mm39_v1_chr3_+_27425500_27425500	0.010454852451522688	AUGGCUU	ENSMUST00000057186.2|Ghsr|ENSMUSG00000051136.2|growth hormone secretagogue receptor
mm39_v1_chr8_+_129085719_129085787	0.010352021511451702	AUGGCUU	ENSMUST00000026917.10|Nrp1|ENSMUSG00000025810.10|neuropilin 1
mm39_v1_chr17_-_28039588_28039662	0.010070210850013271	AUGGCUU	ENSMUST00000114863.10|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains	ENSMUST00000233131.2|Ilrun|ENSMUSG00000056692.14|inflammation and lipid regulator with UBA-like and NBR1-like domains
mm39_v1_chr5_-_68004743_68004781	0.01006990042193368	AUGGCUU	ENSMUST00000072971.13|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113652.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113651.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000037380.15|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm39_v1_chr15_-_73295029_73295068	0.009651776851131036	AUGGCUU	ENSMUST00000239146.2|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000110036.11|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000228180.3|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2
mm39_v1_chr5_-_143717970_143718072	0.00959338010860076	AUGGCUU	ENSMUST00000053287.6|Usp42|ENSMUSG00000051306.8|ubiquitin specific peptidase 42
mm39_v1_chr13_+_47196975_47197067	0.009541911183804107	AUGGCUU	ENSMUST00000037025.16|Kdm1b|ENSMUSG00000038080.18|lysine (K)-specific demethylase 1B	ENSMUST00000143868.2|Kdm1b|ENSMUSG00000038080.18|lysine (K)-specific demethylase 1B
mm39_v1_chr12_-_85017586_85017674	0.009226614903452834	AUGGCUU	ENSMUST00000165886.2|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000167448.8|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1	ENSMUST00000043169.14|Arel1|ENSMUSG00000042350.14|apoptosis resistant E3 ubiquitin protein ligase 1
mm39_v1_chr9_+_45749869_45749892	0.00887736407261352	AUGGCUU	ENSMUST00000078111.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1	ENSMUST00000034591.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1
mm39_v1_chr3_-_127574167_127574178	0.008833006434733635	AUGGCUU	ENSMUST00000029662.12|Alpk1|ENSMUSG00000028028.12|alpha-kinase 1
mm39_v1_chr9_+_78020554_78020659	0.008706605380672404	AUGGCUU	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr3_-_84212069_84212116	0.008154542571776965	AUGGCUU	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr6_+_146626455_146626502	0.007714381473519534	AUGGCUU	ENSMUST00000001675.14|Stk38l|ENSMUSG00000001630.14|serine/threonine kinase 38 like
mm39_v1_chr8_-_126625029_126625061	0.007678664677373177	AUGGCUU	ENSMUST00000047239.13|Pcnx2|ENSMUSG00000060212.14|pecanex homolog 2	ENSMUST00000131127.3|Pcnx2|ENSMUSG00000060212.14|pecanex homolog 2
mm39_v1_chr14_+_34395845_34395890	0.007358024507897309	AUGGCUU	ENSMUST00000048263.14|Wapl|ENSMUSG00000041408.19|WAPL cohesin release factor
mm39_v1_chr18_-_79152504_79152606	0.006752274534380145	AUGGCUU	ENSMUST00000025430.11|Setbp1|ENSMUSG00000024548.12|SET binding protein 1
mm39_v1_chr3_+_142236086_142236147	0.006729326397583725	AUGGCUU	ENSMUST00000171263.8|Gbp7|ENSMUSG00000040253.16|guanylate binding protein 7	ENSMUST00000045097.11|Gbp7|ENSMUSG00000040253.16|guanylate binding protein 7
mm39_v1_chr3_+_16237371_16237447	0.006066985225988365	AUGGCUU	ENSMUST00000108345.9|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000191774.6|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000108346.5|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3
mm39_v1_chr10_-_81003730_81003757	0.0059717972750316746	AUGGCUU	ENSMUST00000005064.14|Pias4|ENSMUSG00000004934.15|protein inhibitor of activated STAT 4
mm39_v1_chr4_-_43562397_43562438	0.005928030770038407	AUGGCUU	ENSMUST00000030187.14|Tln1|ENSMUSG00000028465.17|talin 1
mm39_v1_chr18_+_36414122_36414204	0.005634462413836688	AUGGCUU	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr13_-_46881388_46881482	0.005420918346411846	AUGGCUU	ENSMUST00000021803.10|Nup153|ENSMUSG00000021374.11|nucleoporin 153
mm39_v1_chr19_-_41790458_41790499	0.0050846665225721	AUGGCUU	ENSMUST00000026150.15|Arhgap19|ENSMUSG00000025154.16|Rho GTPase activating protein 19	ENSMUST00000163265.9|Arhgap19|ENSMUSG00000025154.16|Rho GTPase activating protein 19	ENSMUST00000177495.2|Arhgap19|ENSMUSG00000025154.16|Rho GTPase activating protein 19
mm39_v1_chr1_+_74545203_74545264	0.004834284054345769	AUGGCUU	ENSMUST00000087215.7|Cnot9|ENSMUSG00000026174.10|CCR4-NOT transcription complex, subunit 9
mm39_v1_chr11_+_85780807_85780889	0.004296774542861531	AUGGCUU	ENSMUST00000000096.12|Tbx4|ENSMUSG00000000094.13|T-box 4
mm39_v1_chr2_+_33106062_33106096	0.0042077860823832415	AUGGCUU	ENSMUST00000004208.7|Angptl2|ENSMUSG00000004105.9|angiopoietin-like 2
mm39_v1_chr17_+_88748139_88748217	0.0042071597203582915	AUGGCUU	ENSMUST00000112238.9|Foxn2|ENSMUSG00000034998.19|forkhead box N2	ENSMUST00000155640.2|Foxn2|ENSMUSG00000034998.19|forkhead box N2
mm39_v1_chr1_+_166081664_166081722	0.004166685631644672	AUGGCUU	ENSMUST00000111416.7|Ildr2|ENSMUSG00000040612.14|immunoglobulin-like domain containing receptor 2
mm39_v1_chr17_-_27386763_27386776	0.00388962278106197	AUGGCUU	ENSMUST00000025046.4|Ip6k3|ENSMUSG00000024210.4|inositol hexaphosphate kinase 3
mm39_v1_chr9_+_62765362_62765420	0.003781544842953449	AUGGCUU	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr12_+_76417040_76417040	0.003460218791511678	AUGGCUU	ENSMUST00000042779.4|Zbtb1|ENSMUSG00000033454.7|zinc finger and BTB domain containing 1
mm39_v1_chr10_-_20600797_20600824	0.0033255114730545215	AUGGCUU	ENSMUST00000020165.14|Pde7b|ENSMUSG00000019990.16|phosphodiesterase 7B
mm39_v1_chr1_-_157240138_157240191	0.0030864623011141973	AUGGCUU	ENSMUST00000078308.13|Rasal2|ENSMUSG00000070565.12|RAS protein activator like 2
mm39_v1_chr15_-_74544409_74544425	0.0029677287071422967	AUGGCUU	ENSMUST00000023268.14|Arc|ENSMUSG00000022602.15|activity regulated cytoskeletal-associated protein	ENSMUST00000110009.4|Arc|ENSMUSG00000022602.15|activity regulated cytoskeletal-associated protein
mm39_v1_chr3_+_52175757_52175827	0.002809291546721672	AUGGCUU	ENSMUST00000053764.7|Foxo1|ENSMUSG00000044167.7|forkhead box O1
mm39_v1_chr17_+_50816296_50816431	0.002090735441733846	AUGGCUU	ENSMUST00000043938.8|Plcl2|ENSMUSG00000038910.8|phospholipase C-like 2
mm39_v1_chr11_+_102036356_102036375	0.0019451583521397126	AUGGCUU	ENSMUST00000055409.6|Nags|ENSMUSG00000048217.12|N-acetylglutamate synthase
mm39_v1_chr2_+_163280375_163280456	0.0018158210460543127	AUGGCUU	ENSMUST00000109420.10|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000109421.10|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000018087.13|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000137070.2|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1
mm39_v1_chr14_-_47059694_47059743	0.0016088510116113266	AUGGCUU	ENSMUST00000111817.8|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta	ENSMUST00000079314.12|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta
mm39_v1_chr10_+_58091287_58091361	0.0013256680761587728	AUGGCUU	ENSMUST00000057659.14|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162041.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2	ENSMUST00000162860.8|Gcc2|ENSMUSG00000038039.14|GRIP and coiled-coil domain containing 2
mm39_v1_chr17_-_83939316_83939335	0.0012195447359608417	AUGGCUU	ENSMUST00000234613.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3	ENSMUST00000051482.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3
mm39_v1_chr2_-_168048795_168048842	0.001199806874628094	AUGGCUU	ENSMUST00000057793.11|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr7_+_119701670_119701713	0.0009868167513747879	AUGGCUU	ENSMUST00000118737.3|Tmem159|ENSMUSG00000030917.14|transmembrane protein 159
mm39_v1_chr4_+_129030710_129030792	0.0009001868265736755	AUGGCUU	ENSMUST00000102600.4|Fndc5|ENSMUSG00000001334.10|fibronectin type III domain containing 5
mm39_v1_chr1_+_75522902_75522957	0.0008532386149352717	AUGGCUU	ENSMUST00000124341.8|Slc4a3|ENSMUSG00000006576.17|solute carrier family 4 (anion exchanger), member 3
mm39_v1_chr7_+_29003382_29003432	0.0007752665428081667	AUGGCUU	ENSMUST00000049977.13|Dpf1|ENSMUSG00000030584.15|D4, zinc and double PHD fingers family 1
mm39_v1_chr1_-_14380418_14380463	0.0006382726783181783	AUGGCUU	ENSMUST00000027066.13|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000168081.9|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr11_+_69826603_69826643	0.0006239041874932862	AUGGCUU	ENSMUST00000018698.12|Ybx2|ENSMUSG00000018554.14|Y box protein 2
mm39_v1_chr19_+_42158995_42159096	0.00019512322721004186	AUGGCUU	ENSMUST00000169536.8|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27	ENSMUST00000099443.11|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27
