mm39_v1_chr13_+_23765546_23765581	1.816622119010215	Cdx2	ENSMUST00000102968.3|H4c4|ENSMUSG00000061482.8|H4 clustered histone 4
mm39_v1_chr13_+_23728222_23728222	1.2207920446746123	Cdx2	ENSMUST00000075558.5|H3c7|ENSMUSG00000100210.3|H3 clustered histone 7
mm39_v1_chr13_-_24118139_24118212	1.2062636572676384	Cdx2	ENSMUST00000052776.4|H2bc1|ENSMUSG00000050799.4|H2B clustered histone 1
mm39_v1_chr13_-_22219738_22219774	0.7911269519587674	Cdx2	ENSMUST00000091742.6|H2ac12|ENSMUSG00000069302.6|H2A clustered histone 12
mm39_v1_chr2_-_59778560_59778594	0.38007437888637857	Cdx2	ENSMUST00000153136.2|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr19_+_8828132_8828149	0.3479537388900903	Cdx2	ENSMUST00000235683.2|Lrrn4cl|ENSMUSG00000071656.8|LRRN4 C-terminal like	ENSMUST00000096257.3|Lrrn4cl|ENSMUSG00000071656.8|LRRN4 C-terminal like
mm39_v1_chr15_+_3300249_3300488	0.339059592289307	Cdx2	ENSMUST00000082424.12|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159158.9|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159216.10|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000160311.3|Selenop|ENSMUSG00000064373.14|selenoprotein P
mm39_v1_chr14_-_54923517_54923625	0.2842991352196931	Cdx2	ENSMUST00000125265.2|Acin1|ENSMUSG00000022185.20|apoptotic chromatin condensation inducer 1
mm39_v1_chr8_-_5155347_5155358	0.2708694176298078	Cdx2	ENSMUST00000023835.3|Slc10a2|ENSMUSG00000023073.3|solute carrier family 10, member 2
mm39_v1_chr14_+_80237691_80237749	0.25428060673948444	Cdx2	ENSMUST00000228749.2|Olfm4|ENSMUSG00000022026.8|olfactomedin 4	ENSMUST00000088735.4|Olfm4|ENSMUSG00000022026.8|olfactomedin 4
mm39_v1_chr15_-_50746202_50746218	0.2442569363939801	Cdx2	ENSMUST00000184885.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr6_-_52190299_52190323	0.2374002566694267	Cdx2	ENSMUST00000128102.4|Gm28308|ENSMUSG00000101298.2|predicted gene 28308
mm39_v1_chr19_-_34856853_34856864	0.20428354631337528	Cdx2	ENSMUST00000036584.13|Pank1|ENSMUSG00000033610.17|pantothenate kinase 1
mm39_v1_chr2_-_51039112_51039127	0.14100788485418683	Cdx2	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chrX_+_72818003_72818018	0.1399679772466865	Cdx2	ENSMUST00000002081.6|Srpk3|ENSMUSG00000002007.6|serine/arginine-rich protein specific kinase 3
mm39_v1_chr1_-_186438177_186438196	0.09791382274834597	Cdx2	ENSMUST00000045288.14|Tgfb2|ENSMUSG00000039239.15|transforming growth factor, beta 2
mm39_v1_chr8_+_95113066_95113135	0.08857856809061539	Cdx2	ENSMUST00000161576.8|Herpud1|ENSMUSG00000031770.17|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	ENSMUST00000034220.8|Herpud1|ENSMUSG00000031770.17|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm39_v1_chr10_-_33920300_33920315	0.08732795306113117	Cdx2	ENSMUST00000048052.7|Calhm4|ENSMUSG00000039508.7|calcium homeostasis modulator family member 4
mm39_v1_chr11_-_99134885_99134964	0.07402878979796199	Cdx2	ENSMUST00000103132.10|Krt222|ENSMUSG00000035849.15|keratin 222	ENSMUST00000038214.7|Krt222|ENSMUSG00000035849.15|keratin 222
mm39_v1_chr12_+_113038098_113038143	0.07040941405951232	Cdx2	ENSMUST00000012355.14|Tex22|ENSMUSG00000012211.14|testis expressed gene 22	ENSMUST00000146107.8|Tex22|ENSMUSG00000012211.14|testis expressed gene 22
mm39_v1_chr6_-_122317484_122317520	0.057956897863782206	Cdx2	ENSMUST00000112600.9|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr9_+_95519654_95519685	0.05734898795072866	Cdx2	ENSMUST00000015498.9|Pcolce2|ENSMUSG00000015354.9|procollagen C-endopeptidase enhancer 2
mm39_v1_chr6_+_17491231_17491242	0.05028091670132998	Cdx2	ENSMUST00000080469.12|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr11_-_79394904_79394915	0.044460083876776926	Cdx2	ENSMUST00000164465.3|Omg|ENSMUSG00000049612.11|oligodendrocyte myelin glycoprotein
mm39_v1_chr18_-_79152504_79152606	0.042610832937449765	Cdx2	ENSMUST00000025430.11|Setbp1|ENSMUSG00000024548.12|SET binding protein 1
mm39_v1_chr8_-_34333573_34333699	0.04051186767426602	Cdx2	ENSMUST00000183062.2|Rbpms|ENSMUSG00000031586.18|RNA binding protein gene with multiple splicing
mm39_v1_chr18_-_35841435_35841467	0.04002541824581121	Cdx2	ENSMUST00000236738.2|Dnajc18|ENSMUSG00000024350.7|DnaJ heat shock protein family (Hsp40) member C18	ENSMUST00000237995.2|Dnajc18|ENSMUSG00000024350.7|DnaJ heat shock protein family (Hsp40) member C18
mm39_v1_chr1_-_179572765_179572836	0.03792148950836132	Cdx2	ENSMUST00000211943.3|Kif28|ENSMUSG00000087236.4|kinesin family member 28	ENSMUST00000131716.4|Kif28|ENSMUSG00000087236.4|kinesin family member 28	ENSMUST00000221136.2|Kif28|ENSMUSG00000087236.4|kinesin family member 28
mm39_v1_chr13_-_63712140_63712140	0.031870161509493074	Cdx2	ENSMUST00000195756.6|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr2_-_25982160_25982189	0.031160293993982603	Cdx2	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chr3_+_13536696_13536793	0.02996144350811671	Cdx2	ENSMUST00000191806.3|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like	ENSMUST00000193117.3|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like
mm39_v1_chr4_-_109059414_109059469	0.026594784543227373	Cdx2	ENSMUST00000160774.8|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9	ENSMUST00000194478.6|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9	ENSMUST00000030288.14|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9	ENSMUST00000162787.9|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9
mm39_v1_chr9_-_15023396_15023415	0.025417403801117868	Cdx2	ENSMUST00000159985.2|Hephl1|ENSMUSG00000031936.10|hephaestin-like 1
mm39_v1_chr5_+_13448833_13448964	0.021936942037852118	Cdx2	ENSMUST00000137798.10|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr6_-_71239216_71239265	0.021103654888317055	Cdx2	ENSMUST00000129630.3|Smyd1|ENSMUSG00000055027.18|SET and MYND domain containing 1	ENSMUST00000114186.9|Smyd1|ENSMUSG00000055027.18|SET and MYND domain containing 1	ENSMUST00000074301.10|Smyd1|ENSMUSG00000055027.18|SET and MYND domain containing 1
mm39_v1_chrX_+_138585728_138585833	0.020665267409301705	Cdx2	ENSMUST00000096313.4|Tbc1d8b|ENSMUSG00000042473.9|TBC1 domain family, member 8B
mm39_v1_chr18_+_65715460_65715684	0.018117362756309454	Cdx2	ENSMUST00000169679.8|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000183326.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chr18_+_65715156_65715346	0.01771255196049281	Cdx2	ENSMUST00000237553.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000237712.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000182684.8|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chr3_+_126390951_126390964	0.016275108178510946	Cdx2	ENSMUST00000171289.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr17_-_90395771_90395828	0.015655731397545867	Cdx2	ENSMUST00000197268.5|Nrxn1|ENSMUSG00000024109.19|neurexin I	ENSMUST00000173917.8|Nrxn1|ENSMUSG00000024109.19|neurexin I
mm39_v1_chr10_-_33920289_33920295	0.015338007114143768	Cdx2	ENSMUST00000218239.2|Calhm4|ENSMUSG00000039508.7|calcium homeostasis modulator family member 4
mm39_v1_chr14_+_54923655_54923695	0.014658835033439586	Cdx2	ENSMUST00000038539.8|1700123O20Rik|ENSMUSG00000040822.8|RIKEN cDNA 1700123O20 gene	ENSMUST00000228027.2|1700123O20Rik|ENSMUSG00000040822.8|RIKEN cDNA 1700123O20 gene
mm39_v1_chr5_+_128677863_128677912	0.013302910971533135	Cdx2	ENSMUST00000117102.4|Fzd10|ENSMUSG00000081683.6|frizzled class receptor 10
mm39_v1_chr2_+_74552322_74552418	0.01271405111585627	Cdx2	ENSMUST00000047904.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr10_+_118040729_118040847	0.011677949503851422	Cdx2	ENSMUST00000096691.5|Il22|ENSMUSG00000074695.4|interleukin 22
mm39_v1_chr2_+_142920386_142920401	0.008489426067276241	Cdx2	ENSMUST00000028902.3|Otor|ENSMUSG00000027416.3|otoraplin
mm39_v1_chrX_-_50294867_50294911	0.008443789602844146	Cdx2	ENSMUST00000114876.9|Mbnl3|ENSMUSG00000036109.18|muscleblind like splicing factor 3
mm39_v1_chr11_-_99328969_99328985	0.008102401369206374	Cdx2	ENSMUST00000017743.3|Krt20|ENSMUSG00000035775.3|keratin 20
mm39_v1_chrX_+_21581135_21581290	0.0077434850601621205	Cdx2	ENSMUST00000033414.8|Slc6a14|ENSMUSG00000031089.8|solute carrier family 6 (neurotransmitter transporter), member 14
mm39_v1_chr1_-_186437760_186437897	0.007313645509187078	Cdx2	ENSMUST00000195201.2|Tgfb2|ENSMUSG00000039239.15|transforming growth factor, beta 2
mm39_v1_chr5_+_67055753_67055805	0.007158549530746227	Cdx2	ENSMUST00000122812.5|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000117601.8|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr15_+_23036535_23036599	0.0070978913132193604	Cdx2	ENSMUST00000164787.8|Cdh18|ENSMUSG00000040420.16|cadherin 18
mm39_v1_chr9_-_65330231_65330243	0.005919732917206968	Cdx2	ENSMUST00000065894.7|Slc51b|ENSMUSG00000053862.7|solute carrier family 51, beta subunit
mm39_v1_chr15_-_101441254_101441259	0.0052268459953470625	Cdx2	ENSMUST00000023720.8|Krt84|ENSMUSG00000044294.9|keratin 84
mm39_v1_chr3_+_3699205_3699221	0.0048718006902111494	Cdx2	ENSMUST00000108394.3|Hnf4g|ENSMUSG00000017688.15|hepatocyte nuclear factor 4, gamma
mm39_v1_chr6_+_42263609_42263627	0.004728708842098681	Cdx2	ENSMUST00000238845.2|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1	ENSMUST00000031894.13|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1
mm39_v1_chr3_+_93052089_93052106	0.004660854291918004	Cdx2	ENSMUST00000107300.7|Crnn|ENSMUSG00000078657.7|cornulin	ENSMUST00000195515.2|Crnn|ENSMUSG00000078657.7|cornulin
mm39_v1_chr8_+_55003359_55003375	0.004385592743378244	Cdx2	ENSMUST00000033918.4|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5
mm39_v1_chr18_+_65715351_65715398	0.003422635010940908	Cdx2	ENSMUST00000235669.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000183319.8|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000236523.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000237886.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chr11_-_99433984_99434048	0.003262159302211981	Cdx2	ENSMUST00000107443.8|Krt40|ENSMUSG00000059169.10|keratin 40	ENSMUST00000074253.4|Krt40|ENSMUSG00000059169.10|keratin 40
mm39_v1_chr18_+_44249254_44249330	0.003182268580877792	Cdx2	ENSMUST00000212114.2|Gm37797|ENSMUSG00000110628.2|predicted gene, 37797
mm39_v1_chr19_-_47680528_47680535	0.0022384782289542175	Cdx2	ENSMUST00000026045.14|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1	ENSMUST00000086923.6|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1
mm39_v1_chr10_+_129357661_129357661	0.0004343027467765814	Cdx2	ENSMUST00000217228.2|Olfr791|ENSMUSG00000047626.5|olfactory receptor 791
mm39_v1_chr3_+_126391046_126391076	0.0003318672813753316	Cdx2	ENSMUST00000106401.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr17_-_31348576_31348620	0.0001449232248285586	Cdx2	ENSMUST00000024827.5|Tff3|ENSMUSG00000024029.5|trefoil factor 3, intestinal
