mm39_v1_chr4_-_86587728_86587797	1.851178149200224	Emx1_Emx2	ENSMUST00000149700.8|Plin2|ENSMUSG00000028494.13|perilipin 2
mm39_v1_chr10_+_81093110_81093144	1.6512008365784607	Emx1_Emx2	ENSMUST00000117488.8|Matk|ENSMUSG00000004933.18|megakaryocyte-associated tyrosine kinase	ENSMUST00000105328.10|Matk|ENSMUSG00000004933.18|megakaryocyte-associated tyrosine kinase	ENSMUST00000121205.8|Matk|ENSMUSG00000004933.18|megakaryocyte-associated tyrosine kinase
mm39_v1_chr14_+_69585036_69585036	1.543810135721686	Emx1_Emx2	ENSMUST00000064831.6|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4
mm39_v1_chr12_-_75678092_75678134	1.4602010929692475	Emx1_Emx2	ENSMUST00000238938.2|Rplp2-ps1|ENSMUSG00000118552.2|ribosomal protein, large P2, pseudogene 1
mm39_v1_chr17_-_36343573_36343747	1.31841814576411	Emx1_Emx2	ENSMUST00000102678.5|H2-T23|ENSMUSG00000067212.9|histocompatibility 2, T region locus 23
mm39_v1_chr2_+_36120438_36120557	1.3105297884514004	Emx1_Emx2	ENSMUST00000062069.6|Ptgs1|ENSMUSG00000047250.14|prostaglandin-endoperoxide synthase 1
mm39_v1_chr2_-_157408239_157408281	1.1505327726200927	Emx1_Emx2	ENSMUST00000109528.9|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein	ENSMUST00000088494.3|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein
mm39_v1_chr18_-_43610829_43610868	1.1397904684498892	Emx1_Emx2	ENSMUST00000057110.11|Eif3j2|ENSMUSG00000043424.11|eukaryotic translation initiation factor 3, subunit J2
mm39_v1_chr9_+_21634779_21634911	1.0904744214595403	Emx1_Emx2	ENSMUST00000034713.9|Ldlr|ENSMUSG00000032193.10|low density lipoprotein receptor
mm39_v1_chr3_-_106126794_106126823	1.0888037832874493	Emx1_Emx2	ENSMUST00000082219.6|Chil4|ENSMUSG00000063779.7|chitinase-like 4
mm39_v1_chr2_-_86180622_86180628	1.0167734197237488	Emx1_Emx2	ENSMUST00000099894.5|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055	ENSMUST00000213564.3|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055
mm39_v1_chr13_+_38223023_38223023	0.871489379669818	Emx1_Emx2	ENSMUST00000226110.2|Riok1|ENSMUSG00000021428.10|RIO kinase 1
mm39_v1_chr2_-_93283024_93283032	0.7983899624234791	Emx1_Emx2	ENSMUST00000111257.8|Cd82|ENSMUSG00000027215.14|CD82 antigen	ENSMUST00000145553.8|Cd82|ENSMUSG00000027215.14|CD82 antigen
mm39_v1_chr15_+_65682066_65682083	0.7854163503166232	Emx1_Emx2	ENSMUST00000211878.2|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A
mm39_v1_chr1_-_133537953_133538040	0.7478080318035343	Emx1_Emx2	ENSMUST00000164574.2|Snrpe|ENSMUSG00000090553.9|small nuclear ribonucleoprotein E	ENSMUST00000166291.8|Snrpe|ENSMUSG00000090553.9|small nuclear ribonucleoprotein E	ENSMUST00000164096.2|Snrpe|ENSMUSG00000090553.9|small nuclear ribonucleoprotein E	ENSMUST00000166915.8|Snrpe|ENSMUSG00000090553.9|small nuclear ribonucleoprotein E
mm39_v1_chr19_-_24178000_24178016	0.7356114159189985	Emx1_Emx2	ENSMUST00000233658.3|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chr15_+_100202061_100202073	0.6583521597562373	Emx1_Emx2	ENSMUST00000229574.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1	ENSMUST00000229217.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr14_-_104760051_104760143	0.6268341353426167	Emx1_Emx2	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr15_+_100202021_100202057	0.609705468348877	Emx1_Emx2	ENSMUST00000230472.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr4_+_150321142_150321224	0.6044979417593445	Emx1_Emx2	ENSMUST00000150175.8|Eno1|ENSMUSG00000063524.14|enolase 1, alpha non-neuron
mm39_v1_chr15_+_100202079_100202124	0.5980079506062246	Emx1_Emx2	ENSMUST00000230252.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1	ENSMUST00000231166.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr11_+_109434519_109434580	0.5952041228729937	Emx1_Emx2	ENSMUST00000106696.2|Arsg|ENSMUSG00000020604.14|arylsulfatase G
mm39_v1_chr2_-_151586063_151586125	0.5950757812075973	Emx1_Emx2	ENSMUST00000109869.2|Psmf1|ENSMUSG00000032869.16|proteasome (prosome, macropain) inhibitor subunit 1
mm39_v1_chr11_+_17207558_17207688	0.5796177253957628	Emx1_Emx2	ENSMUST00000000594.9|C1d|ENSMUSG00000000581.9|C1D nuclear receptor co-repressor	ENSMUST00000156784.2|C1d|ENSMUSG00000000581.9|C1D nuclear receptor co-repressor
mm39_v1_chr9_+_5298669_5298701	0.5776970824947215	Emx1_Emx2	ENSMUST00000238505.2|Casp1|ENSMUSG00000025888.7|caspase 1
mm39_v1_chr4_-_150998857_150998937	0.5620511703832206	Emx1_Emx2	ENSMUST00000105675.8|Park7|ENSMUSG00000028964.15|Parkinson disease (autosomal recessive, early onset) 7
mm39_v1_chr12_-_55045887_55045928	0.5585659269276908	Emx1_Emx2	ENSMUST00000173529.2|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A
mm39_v1_chr8_-_4829519_4829557	0.5474054955413713	Emx1_Emx2	ENSMUST00000022945.9|Shcbp1|ENSMUSG00000022322.9|Shc SH2-domain binding protein 1
mm39_v1_chr2_+_128942900_128942915	0.5452605149627594	Emx1_Emx2	ENSMUST00000103205.11|Polr1b|ENSMUSG00000027395.16|polymerase (RNA) I polypeptide B
mm39_v1_chr4_-_133972890_133972917	0.539485036120027	Emx1_Emx2	ENSMUST00000030644.8|Zfp593|ENSMUSG00000028840.11|zinc finger protein 593
mm39_v1_chr17_-_74602469_74602540	0.5356777728733269	Emx1_Emx2	ENSMUST00000233144.2|Memo1|ENSMUSG00000058704.10|mediator of cell motility 1
mm39_v1_chr12_-_84664001_84664203	0.5341508161371438	Emx1_Emx2	ENSMUST00000221070.2|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4	ENSMUST00000021666.6|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4	ENSMUST00000223107.2|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4
mm39_v1_chr2_+_128942919_128942968	0.5265826534331349	Emx1_Emx2	ENSMUST00000028874.8|Polr1b|ENSMUSG00000027395.16|polymerase (RNA) I polypeptide B
mm39_v1_chr3_+_106020545_106020706	0.5097131314437434	Emx1_Emx2	ENSMUST00000079132.12|Chia1|ENSMUSG00000062778.13|chitinase, acidic 1	ENSMUST00000139086.2|Chia1|ENSMUSG00000062778.13|chitinase, acidic 1
mm39_v1_chr11_-_79853200_79853225	0.5022982014810212	Emx1_Emx2	ENSMUST00000108241.8|Utp6|ENSMUSG00000035575.12|UTP6 small subunit processome component	ENSMUST00000043152.6|Utp6|ENSMUSG00000035575.12|UTP6 small subunit processome component
mm39_v1_chr2_+_30331839_30331865	0.5009231815159719	Emx1_Emx2	ENSMUST00000131476.8|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator
mm39_v1_chr10_-_126866682_126866710	0.4983510985835118	Emx1_Emx2	ENSMUST00000040560.11|Tsfm|ENSMUSG00000040521.12|Ts translation elongation factor, mitochondrial
mm39_v1_chr8_-_96615138_96615175	0.47779802162981727	Emx1_Emx2	ENSMUST00000034097.8|Got2|ENSMUSG00000031672.9|glutamatic-oxaloacetic transaminase 2, mitochondrial
mm39_v1_chr1_-_63215812_63215891	0.4596496841185987	Emx1_Emx2	ENSMUST00000185847.2|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000185732.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000188370.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000168099.9|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1
mm39_v1_chr8_-_4829473_4829487	0.44393399218002866	Emx1_Emx2	ENSMUST00000207262.2|Shcbp1|ENSMUSG00000022322.9|Shc SH2-domain binding protein 1
mm39_v1_chr14_+_118374511_118374590	0.4272245163606003	Emx1_Emx2	ENSMUST00000022728.4|Gpr180|ENSMUSG00000022131.4|G protein-coupled receptor 180
mm39_v1_chr6_+_17749169_17749266	0.426808986612756	Emx1_Emx2	ENSMUST00000053148.14|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7	ENSMUST00000115417.4|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7
mm39_v1_chr9_+_69919822_69919877	0.41971569992767777	Emx1_Emx2	ENSMUST00000118198.8|Gtf2a2|ENSMUSG00000033543.18|general transcription factor II A, 2	ENSMUST00000119905.8|Gtf2a2|ENSMUSG00000033543.18|general transcription factor II A, 2	ENSMUST00000119413.8|Gtf2a2|ENSMUSG00000033543.18|general transcription factor II A, 2	ENSMUST00000140305.8|Gtf2a2|ENSMUSG00000033543.18|general transcription factor II A, 2	ENSMUST00000122087.8|Gtf2a2|ENSMUSG00000033543.18|general transcription factor II A, 2
mm39_v1_chr15_-_36496880_36496966	0.4194871442526069	Emx1_Emx2	ENSMUST00000228601.2|Ankrd46|ENSMUSG00000048307.9|ankyrin repeat domain 46	ENSMUST00000057486.9|Ankrd46|ENSMUSG00000048307.9|ankyrin repeat domain 46
mm39_v1_chr11_-_106889291_106889318	0.3971360257589869	Emx1_Emx2	ENSMUST00000124541.8|Kpna2|ENSMUSG00000018362.15|karyopherin (importin) alpha 2
mm39_v1_chrX_-_8059597_8059751	0.3852462706731872	Emx1_Emx2	ENSMUST00000143223.2|Ebp|ENSMUSG00000031168.15|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	ENSMUST00000033509.15|Ebp|ENSMUSG00000031168.15|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm39_v1_chr7_-_121700958_121701109	0.3852129846941349	Emx1_Emx2	ENSMUST00000139456.2|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000106471.9|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000123296.8|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000033157.10|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1
mm39_v1_chr3_-_130524024_130524047	0.3752113390299085	Emx1_Emx2	ENSMUST00000079085.11|Rpl34|ENSMUSG00000062006.13|ribosomal protein L34
mm39_v1_chr6_+_134617903_134617977	0.3720237788621079	Emx1_Emx2	ENSMUST00000062755.10|Borcs5|ENSMUSG00000042992.16|BLOC-1 related complex subunit 5
mm39_v1_chr7_-_78432774_78432837	0.37148705111611907	Emx1_Emx2	ENSMUST00000032841.7|Mrpl46|ENSMUSG00000030612.7|mitochondrial ribosomal protein L46
mm39_v1_chr4_-_92079986_92079986	0.3705888549723581	Emx1_Emx2	ENSMUST00000123179.2|Gm12666|ENSMUSG00000066107.7|predicted gene 12666
mm39_v1_chrX_-_158921370_158921431	0.3677887625537122	Emx1_Emx2	ENSMUST00000033662.9|Pdha1|ENSMUSG00000031299.11|pyruvate dehydrogenase E1 alpha 1
mm39_v1_chr6_+_66873381_66873533	0.35977829289855356	Emx1_Emx2	ENSMUST00000043148.13|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114228.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114227.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114226.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000204511.3|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114225.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114224.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114222.4|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12
mm39_v1_chr18_+_31742565_31742565	0.3596109719410216	Emx1_Emx2	ENSMUST00000164667.2|B930094E09Rik|ENSMUSG00000092124.2|RIKEN cDNA B930094E09 gene
mm39_v1_chr11_+_6510167_6510190	0.35536969035008614	Emx1_Emx2	ENSMUST00000109722.9|Ccm2|ENSMUSG00000000378.16|cerebral cavernous malformation 2
mm39_v1_chr7_+_131162338_131162401	0.3545169906859107	Emx1_Emx2	ENSMUST00000208571.2|Bub3|ENSMUSG00000066979.7|BUB3 mitotic checkpoint protein
mm39_v1_chr6_-_89572629_89572640	0.3532509178392794	Emx1_Emx2	ENSMUST00000113550.6|Chchd6|ENSMUSG00000030086.17|coiled-coil-helix-coiled-coil-helix domain containing 6	ENSMUST00000032172.14|Chchd6|ENSMUSG00000030086.17|coiled-coil-helix-coiled-coil-helix domain containing 6
mm39_v1_chr17_+_64203017_64203059	0.34346709442093293	Emx1_Emx2	ENSMUST00000000129.14|Fer|ENSMUSG00000000127.16|fer (fms/fps related) protein kinase
mm39_v1_chr16_-_65359406_65359533	0.33777621235878813	Emx1_Emx2	ENSMUST00000231259.2|Chmp2b|ENSMUSG00000004843.8|charged multivesicular body protein 2B
mm39_v1_chr5_+_147456497_147456518	0.3324779882318945	Emx1_Emx2	ENSMUST00000175807.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr13_-_4659120_4659188	0.3258490142109602	Emx1_Emx2	ENSMUST00000091848.7|Akr1e1|ENSMUSG00000045410.19|aldo-keto reductase family 1, member E1	ENSMUST00000110691.10|Akr1e1|ENSMUSG00000045410.19|aldo-keto reductase family 1, member E1
mm39_v1_chr4_-_107975723_107975751	0.3248677194639682	Emx1_Emx2	ENSMUST00000030340.15|Scp2|ENSMUSG00000028603.16|sterol carrier protein 2, liver
mm39_v1_chr12_+_87490666_87490716	0.32337269200193747	Emx1_Emx2	ENSMUST00000161023.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000160488.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000077462.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000160880.2|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein
mm39_v1_chr2_-_87504008_87504008	0.3220126398007394	Emx1_Emx2	ENSMUST00000213835.2|Olfr1135|ENSMUSG00000075153.3|olfactory receptor 1135
mm39_v1_chr2_+_151385797_151385819	0.3218457120615469	Emx1_Emx2	ENSMUST00000142271.2|Fkbp1a|ENSMUSG00000032966.15|FK506 binding protein 1a
mm39_v1_chr5_+_45650716_45650726	0.31975244830820365	Emx1_Emx2	ENSMUST00000046122.11|Lap3|ENSMUSG00000039682.13|leucine aminopeptidase 3
mm39_v1_chr2_-_92876398_92876517	0.3151331477363493	Emx1_Emx2	ENSMUST00000111272.3|Prdm11|ENSMUSG00000075028.13|PR domain containing 11	ENSMUST00000178666.8|Prdm11|ENSMUSG00000075028.13|PR domain containing 11	ENSMUST00000147339.3|Prdm11|ENSMUSG00000075028.13|PR domain containing 11
mm39_v1_chr17_+_29493113_29493136	0.3148605260748893	Emx1_Emx2	ENSMUST00000234326.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004	ENSMUST00000235117.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr1_+_179788037_179788150	0.30868189443992716	Emx1_Emx2	ENSMUST00000097453.9|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000111117.8|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr11_+_96209093_96209093	0.30469942485083734	Emx1_Emx2	ENSMUST00000049241.9|Hoxb4|ENSMUSG00000038692.9|homeobox B4
mm39_v1_chr12_+_84332006_84332188	0.29886003102124664	Emx1_Emx2	ENSMUST00000123614.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2	ENSMUST00000147363.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2	ENSMUST00000135001.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2	ENSMUST00000146377.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2
mm39_v1_chr19_+_34194990_34195024	0.2874412720829441	Emx1_Emx2	ENSMUST00000119603.2|Stambpl1|ENSMUSG00000024776.19|STAM binding protein like 1
mm39_v1_chr7_+_43321426_43321485	0.286810760176714	Emx1_Emx2	ENSMUST00000038332.9|Ctu1|ENSMUSG00000038888.9|cytosolic thiouridylase subunit 1
mm39_v1_chr14_+_48683797_48683886	0.285791792462797	Emx1_Emx2	ENSMUST00000111735.10|Tmem260|ENSMUSG00000036339.19|transmembrane protein 260
mm39_v1_chr6_+_142702403_142702429	0.28316408320239844	Emx1_Emx2	ENSMUST00000032419.9|Cmas|ENSMUSG00000030282.15|cytidine monophospho-N-acetylneuraminic acid synthetase
mm39_v1_chr7_+_131162137_131162168	0.27467111334088656	Emx1_Emx2	ENSMUST00000207231.2|Bub3|ENSMUSG00000066979.7|BUB3 mitotic checkpoint protein
mm39_v1_chr6_-_13607963_13608099	0.2744339636234035	Emx1_Emx2	ENSMUST00000031554.9|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168	ENSMUST00000149123.3|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168
mm39_v1_chr1_-_63215952_63215992	0.2717097585140993	Emx1_Emx2	ENSMUST00000185412.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000027111.15|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000189664.2|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1
mm39_v1_chrX_+_158086253_158086277	0.2699518989499718	Emx1_Emx2	ENSMUST00000112491.2|Rps6ka3|ENSMUSG00000031309.16|ribosomal protein S6 kinase polypeptide 3
mm39_v1_chr17_+_29493049_29493104	0.26954458706034956	Emx1_Emx2	ENSMUST00000149405.4|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr17_-_56343531_56343624	0.26727701657999253	Emx1_Emx2	ENSMUST00000233803.2|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr13_-_43634695_43634823	0.26507426808215667	Emx1_Emx2	ENSMUST00000144326.4|Ranbp9|ENSMUSG00000038546.10|RAN binding protein 9
mm39_v1_chr4_-_82768958_82769051	0.2646234214480708	Emx1_Emx2	ENSMUST00000139401.2|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21
mm39_v1_chr4_+_126156118_126156173	0.2628983799823097	Emx1_Emx2	ENSMUST00000030660.9|Trappc3|ENSMUSG00000028847.9|trafficking protein particle complex 3
mm39_v1_chr10_-_80754016_80754110	0.2613708287915642	Emx1_Emx2	ENSMUST00000057623.14|Lmnb2|ENSMUSG00000062075.14|lamin B2	ENSMUST00000179022.8|Lmnb2|ENSMUSG00000062075.14|lamin B2
mm39_v1_chr7_+_126575781_126576025	0.26129177410212767	Emx1_Emx2	ENSMUST00000206450.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	ENSMUST00000205830.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr5_-_65248962_65249027	0.2612915679943791	Emx1_Emx2	ENSMUST00000212080.2|Tmem156|ENSMUSG00000037913.13|transmembrane protein 156
mm39_v1_chr10_+_128158413_128158443	0.2598983881905836	Emx1_Emx2	ENSMUST00000219836.2|Cnpy2|ENSMUSG00000025381.4|canopy FGF signaling regulator 2
mm39_v1_chr5_-_139330906_139330988	0.25859415669983843	Emx1_Emx2	ENSMUST00000049630.13|Cox19|ENSMUSG00000045438.13|cytochrome c oxidase assembly protein 19
mm39_v1_chr7_+_78432867_78432867	0.2582310534500149	Emx1_Emx2	ENSMUST00000032840.5|Mrps11|ENSMUSG00000030611.11|mitochondrial ribosomal protein S11
mm39_v1_chr2_+_85809620_85809620	0.25618998450390257	Emx1_Emx2	ENSMUST00000056849.3|Olfr1030|ENSMUSG00000044923.5|olfactory receptor 1030
mm39_v1_chr19_-_33728759_33728759	0.2519715203009805	Emx1_Emx2	ENSMUST00000147153.4|Lipo2|ENSMUSG00000087303.4|lipase, member O2
mm39_v1_chr2_-_17465410_17465446	0.24823969113626668	Emx1_Emx2	ENSMUST00000145492.2|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr14_+_55797468_55797503	0.2453176567865326	Emx1_Emx2	ENSMUST00000147981.2|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11	ENSMUST00000133256.8|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11
mm39_v1_chr12_+_71021395_71021461	0.24433834175229593	Emx1_Emx2	ENSMUST00000160027.8|Psma3|ENSMUSG00000060073.10|proteasome subunit alpha 3	ENSMUST00000160864.8|Psma3|ENSMUSG00000060073.10|proteasome subunit alpha 3
mm39_v1_chr17_+_56312672_56312712	0.23913934658725247	Emx1_Emx2	ENSMUST00000133998.8|Mpnd|ENSMUSG00000003199.17|MPN domain containing
mm39_v1_chr2_-_155771938_155771988	0.22793287377704533	Emx1_Emx2	ENSMUST00000152766.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000139232.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000109632.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000006036.13|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000142655.2|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000159238.2|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1
mm39_v1_chr3_+_32490300_32490300	0.22485793759856598	Emx1_Emx2	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr12_+_80509869_80509974	0.22370079661212194	Emx1_Emx2	ENSMUST00000038185.10|Exd2|ENSMUSG00000032705.10|exonuclease 3'-5' domain containing 2
mm39_v1_chr2_-_119493237_119493338	0.21837889363186666	Emx1_Emx2	ENSMUST00000028768.2|Ndufaf1|ENSMUSG00000027305.10|NADH:ubiquinone oxidoreductase complex assembly factor 1	ENSMUST00000110801.8|Ndufaf1|ENSMUSG00000027305.10|NADH:ubiquinone oxidoreductase complex assembly factor 1	ENSMUST00000110802.8|Ndufaf1|ENSMUSG00000027305.10|NADH:ubiquinone oxidoreductase complex assembly factor 1
mm39_v1_chr15_+_99192968_99193162	0.21824394603982583	Emx1_Emx2	ENSMUST00000128352.8|Prpf40b|ENSMUSG00000023007.16|pre-mRNA processing factor 40B	ENSMUST00000145482.8|Prpf40b|ENSMUSG00000023007.16|pre-mRNA processing factor 40B
mm39_v1_chr12_-_56392646_56392679	0.2164209356298257	Emx1_Emx2	ENSMUST00000021416.9|Mbip|ENSMUSG00000021028.9|MAP3K12 binding inhibitory protein 1
mm39_v1_chr11_+_31823096_31823275	0.21546354222268774	Emx1_Emx2	ENSMUST00000155278.2|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr15_+_6673167_6673187	0.2136663614746791	Emx1_Emx2	ENSMUST00000163073.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr2_+_144435974_144436003	0.21315285234066883	Emx1_Emx2	ENSMUST00000136628.2|Smim26|ENSMUSG00000074754.5|small integral membrane protein 26
mm39_v1_chr9_-_15191218_15191227	0.21139854295972854	Emx1_Emx2	ENSMUST00000034411.10|Med17|ENSMUSG00000031935.10|mediator complex subunit 17
mm39_v1_chr17_-_24698007_24698058	0.21060381784299637	Emx1_Emx2	ENSMUST00000234335.2|Mlst8|ENSMUSG00000024142.16|MTOR associated protein, LST8 homolog (S. cerevisiae)	ENSMUST00000234686.2|Mlst8|ENSMUSG00000024142.16|MTOR associated protein, LST8 homolog (S. cerevisiae)	ENSMUST00000234941.2|Mlst8|ENSMUSG00000024142.16|MTOR associated protein, LST8 homolog (S. cerevisiae)	ENSMUST00000234543.2|Mlst8|ENSMUSG00000024142.16|MTOR associated protein, LST8 homolog (S. cerevisiae)	ENSMUST00000179163.3|Mlst8|ENSMUSG00000024142.16|MTOR associated protein, LST8 homolog (S. cerevisiae)	ENSMUST00000070888.14|Mlst8|ENSMUSG00000024142.16|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm39_v1_chr4_+_102446883_102447040	0.2091063342388907	Emx1_Emx2	ENSMUST00000097949.11|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific	ENSMUST00000106901.2|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr1_+_75498162_75498247	0.20643924117895457	Emx1_Emx2	ENSMUST00000027414.16|Stk11ip|ENSMUSG00000026213.16|serine/threonine kinase 11 interacting protein	ENSMUST00000113553.2|Stk11ip|ENSMUSG00000026213.16|serine/threonine kinase 11 interacting protein
mm39_v1_chr2_-_155772110_155772230	0.2062157579342613	Emx1_Emx2	ENSMUST00000109636.11|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000109631.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1
mm39_v1_chr4_-_149184259_149184333	0.19853352128446208	Emx1_Emx2	ENSMUST00000103217.11|Pex14|ENSMUSG00000028975.17|peroxisomal biogenesis factor 14
mm39_v1_chr7_-_51511964_51512036	0.1977946075057128	Emx1_Emx2	ENSMUST00000169357.2|Fancf|ENSMUSG00000092118.2|Fanconi anemia, complementation group F
mm39_v1_chr2_-_34716083_34716099	0.1967352441857893	Emx1_Emx2	ENSMUST00000113077.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000028220.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr2_+_110551685_110551836	0.19533081184038018	Emx1_Emx2	ENSMUST00000111016.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr10_-_126866658_126866681	0.19491569782896462	Emx1_Emx2	ENSMUST00000120547.2|Tsfm|ENSMUSG00000040521.12|Ts translation elongation factor, mitochondrial	ENSMUST00000152054.8|Tsfm|ENSMUSG00000040521.12|Ts translation elongation factor, mitochondrial
mm39_v1_chr5_+_44070486_44070493	0.19458877770627706	Emx1_Emx2	ENSMUST00000122204.3|Gm7879|ENSMUSG00000033036.10|predicted pseudogene 7879	ENSMUST00000200338.2|Gm7879|ENSMUSG00000033036.10|predicted pseudogene 7879
mm39_v1_chr1_+_179788675_179788675	0.19215567045130602	Emx1_Emx2	ENSMUST00000076687.12|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000097450.10|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000212756.2|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr18_-_66135683_66135714	0.19187014914388928	Emx1_Emx2	ENSMUST00000120461.9|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1	ENSMUST00000048260.15|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1	ENSMUST00000236866.2|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1
mm39_v1_chr17_+_29493157_29493178	0.19103679244530217	Emx1_Emx2	ENSMUST00000234234.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr5_-_65248927_65248958	0.19036678088700262	Emx1_Emx2	ENSMUST00000043352.8|Tmem156|ENSMUSG00000037913.13|transmembrane protein 156
mm39_v1_chr6_+_67838100_67838143	0.1876001407670132	Emx1_Emx2	ENSMUST00000200586.2|Igkv17-127|ENSMUSG00000076508.4|immunoglobulin kappa variable 17-127	ENSMUST00000103309.3|Igkv17-127|ENSMUSG00000076508.4|immunoglobulin kappa variable 17-127
mm39_v1_chr9_+_78099229_78099282	0.18546332719792585	Emx1_Emx2	ENSMUST00000034903.7|Gsta4|ENSMUSG00000032348.7|glutathione S-transferase, alpha 4
mm39_v1_chr6_+_129510117_129510144	0.18508202490051034	Emx1_Emx2	ENSMUST00000032264.9|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm39_v1_chr7_+_126575752_126575770	0.18406457669897675	Emx1_Emx2	ENSMUST00000206346.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chrX_-_55643429_55643467	0.17839802055338622	Emx1_Emx2	ENSMUST00000059899.3|Mmgt1|ENSMUSG00000061273.4|membrane magnesium transporter 1
mm39_v1_chr12_-_87490580_87490688	0.16964153101600138	Emx1_Emx2	ENSMUST00000162961.8|Alkbh1|ENSMUSG00000079036.11|alkB homolog 1, histone H2A dioxygenase	ENSMUST00000185301.2|Alkbh1|ENSMUSG00000079036.11|alkB homolog 1, histone H2A dioxygenase
mm39_v1_chr4_+_154059619_154059705	0.1674708439629917	Emx1_Emx2	ENSMUST00000047497.15|Cep104|ENSMUSG00000039523.17|centrosomal protein 104
mm39_v1_chr1_-_84817000_84817011	0.1657610329022168	Emx1_Emx2	ENSMUST00000186648.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr17_-_45910529_45910550	0.16348304649184847	Emx1_Emx2	ENSMUST00000171847.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1	ENSMUST00000166633.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1	ENSMUST00000169729.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1
mm39_v1_chr8_-_108315024_108315096	0.16310147397402633	Emx1_Emx2	ENSMUST00000044106.6|Psmd7|ENSMUSG00000039067.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm39_v1_chr7_+_131162439_131162462	0.16275636227003454	Emx1_Emx2	ENSMUST00000207442.2|Bub3|ENSMUSG00000066979.7|BUB3 mitotic checkpoint protein
mm39_v1_chr15_-_76491758_76491795	0.16263941022489162	Emx1_Emx2	ENSMUST00000071898.7|Cpsf1|ENSMUSG00000034022.9|cleavage and polyadenylation specific factor 1
mm39_v1_chrX_+_151922936_151923006	0.16213776843794914	Emx1_Emx2	ENSMUST00000039720.11|Rragb|ENSMUSG00000041658.13|Ras-related GTP binding B	ENSMUST00000144175.3|Rragb|ENSMUSG00000041658.13|Ras-related GTP binding B
mm39_v1_chr6_-_115014777_115014842	0.16156671217159752	Emx1_Emx2	ENSMUST00000174848.8|Tamm41|ENSMUSG00000030316.14|TAM41 mitochondrial translocator assembly and maintenance homolog	ENSMUST00000032461.12|Tamm41|ENSMUSG00000030316.14|TAM41 mitochondrial translocator assembly and maintenance homolog
mm39_v1_chr7_+_89814713_89814756	0.1596233174385626	Emx1_Emx2	ENSMUST00000207084.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chr19_-_33764859_33764859	0.15958378079814378	Emx1_Emx2	ENSMUST00000148137.9|Lipo1|ENSMUSG00000079342.12|lipase, member O1
mm39_v1_chr17_+_37274714_37274729	0.1594933079300818	Emx1_Emx2	ENSMUST00000209623.2|Polr1has|ENSMUSG00000036214.15|RNA polymerase I subunit H, antisense
mm39_v1_chr2_+_121337226_121337273	0.1589451080747881	Emx1_Emx2	ENSMUST00000099473.10|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76	ENSMUST00000110602.9|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76
mm39_v1_chr4_-_11254253_11254266	0.15782459642979915	Emx1_Emx2	ENSMUST00000044616.10|Ints8|ENSMUSG00000040738.11|integrator complex subunit 8	ENSMUST00000108319.9|Ints8|ENSMUSG00000040738.11|integrator complex subunit 8	ENSMUST00000108318.3|Ints8|ENSMUSG00000040738.11|integrator complex subunit 8
mm39_v1_chr9_+_111014254_111014265	0.15742195930157088	Emx1_Emx2	ENSMUST00000198986.2|Lrrfip2|ENSMUSG00000032497.20|leucine rich repeat (in FLII) interacting protein 2
mm39_v1_chr2_+_110551927_110551973	0.15408881337394853	Emx1_Emx2	ENSMUST00000111017.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr6_-_57512355_57512433	0.151533201967432	Emx1_Emx2	ENSMUST00000042766.6|Ppm1k|ENSMUSG00000037826.6|protein phosphatase 1K (PP2C domain containing)
mm39_v1_chr8_-_8740471_8740539	0.1502384342814081	Emx1_Emx2	ENSMUST00000048545.10|Arglu1|ENSMUSG00000040459.12|arginine and glutamate rich 1
mm39_v1_chr3_-_37180093_37180110	0.14981016159595426	Emx1_Emx2	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr1_-_37535202_37535242	0.14632668380141298	Emx1_Emx2	ENSMUST00000143636.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr1_-_45542442_45542442	0.1459125439067128	Emx1_Emx2	ENSMUST00000086430.5|Col5a2|ENSMUSG00000026042.17|collagen, type V, alpha 2
mm39_v1_chr3_+_88624194_88624213	0.14581370298939358	Emx1_Emx2	ENSMUST00000172252.2|Rit1|ENSMUSG00000028057.15|Ras-like without CAAX 1
mm39_v1_chr19_+_29902506_29902532	0.14346518033552486	Emx1_Emx2	ENSMUST00000120388.9|Il33|ENSMUSG00000024810.17|interleukin 33	ENSMUST00000144528.8|Il33|ENSMUSG00000024810.17|interleukin 33	ENSMUST00000177518.8|Il33|ENSMUSG00000024810.17|interleukin 33
mm39_v1_chr9_-_114469121_114469174	0.14094614429738905	Emx1_Emx2	ENSMUST00000070117.8|Cnot10|ENSMUSG00000056167.9|CCR4-NOT transcription complex, subunit 10
mm39_v1_chr9_+_19828161_19828161	0.14052259333016462	Emx1_Emx2	ENSMUST00000217347.2|Olfr77|ENSMUSG00000051118.10|olfactory receptor 77	ENSMUST00000057596.10|Olfr77|ENSMUSG00000051118.10|olfactory receptor 77
mm39_v1_chr10_-_8632519_8632533	0.14047201054069217	Emx1_Emx2	ENSMUST00000212869.2|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr9_+_56325893_56325965	0.1333411119622233	Emx1_Emx2	ENSMUST00000034879.5|Hmg20a|ENSMUSG00000032329.5|high mobility group 20A	ENSMUST00000215269.2|Hmg20a|ENSMUSG00000032329.5|high mobility group 20A
mm39_v1_chr15_-_76491684_76491742	0.13248864965918755	Emx1_Emx2	ENSMUST00000230157.2|Cpsf1|ENSMUSG00000034022.9|cleavage and polyadenylation specific factor 1
mm39_v1_chr12_+_111937978_111938034	0.13030066318605388	Emx1_Emx2	ENSMUST00000079009.11|Tdrd9|ENSMUSG00000054003.14|tudor domain containing 9
mm39_v1_chr2_-_34716199_34716252	0.1172349483915399	Emx1_Emx2	ENSMUST00000113075.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000113080.9|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000091020.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr1_+_63216281_63216303	0.1167633074560256	Emx1_Emx2	ENSMUST00000188524.2|Eef1b2|ENSMUSG00000025967.17|eukaryotic translation elongation factor 1 beta 2
mm39_v1_chr13_+_16189041_16189060	0.11391263312213466	Emx1_Emx2	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
mm39_v1_chrX_-_133012600_133012622	0.11275509318723523	Emx1_Emx2	ENSMUST00000033610.13|Nox1|ENSMUSG00000031257.15|NADPH oxidase 1
mm39_v1_chr12_-_113733922_113733922	0.1126532628132925	Emx1_Emx2	ENSMUST00000180013.3|Ighv2-9-1|ENSMUSG00000095565.3|immunoglobulin heavy variable 2-9-1
mm39_v1_chr10_-_40134104_40134155	0.10938620241201012	Emx1_Emx2	ENSMUST00000217141.2|Gtf3c6|ENSMUSG00000019837.9|general transcription factor IIIC, polypeptide 6, alpha
mm39_v1_chr3_+_32490525_32490525	0.10536657928942975	Emx1_Emx2	ENSMUST00000108242.2|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chrX_+_56257374_56257514	0.10273055552766458	Emx1_Emx2	ENSMUST00000033466.2|Cd40lg|ENSMUSG00000031132.2|CD40 ligand
mm39_v1_chr13_-_99653045_99653092	0.1019307129711199	Emx1_Emx2	ENSMUST00000064762.6|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr12_+_80509978_80510031	0.10145994785143156	Emx1_Emx2	ENSMUST00000219272.2|Exd2|ENSMUSG00000032705.10|exonuclease 3'-5' domain containing 2
mm39_v1_chr9_-_15191184_15191216	0.09895486263713607	Emx1_Emx2	ENSMUST00000216406.2|Med17|ENSMUSG00000031935.10|mediator complex subunit 17
mm39_v1_chr10_+_89906956_89906982	0.09887181746674796	Emx1_Emx2	ENSMUST00000183109.2|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr6_-_13871454_13871472	0.09847285423737304	Emx1_Emx2	ENSMUST00000185219.2|2610001J05Rik|ENSMUSG00000052419.8|RIKEN cDNA 2610001J05 gene	ENSMUST00000185361.2|2610001J05Rik|ENSMUSG00000052419.8|RIKEN cDNA 2610001J05 gene	ENSMUST00000155856.2|2610001J05Rik|ENSMUSG00000052419.8|RIKEN cDNA 2610001J05 gene
mm39_v1_chr18_+_42669322_42669358	0.09791971104745896	Emx1_Emx2	ENSMUST00000236418.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr17_-_56343625_56343647	0.09614168892969173	Emx1_Emx2	ENSMUST00000003268.11|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr7_+_131161951_131162127	0.09529360588489616	Emx1_Emx2	ENSMUST00000084502.7|Bub3|ENSMUSG00000066979.7|BUB3 mitotic checkpoint protein
mm39_v1_chr9_+_50466127_50466150	0.09519444690369547	Emx1_Emx2	ENSMUST00000213916.2|Il18|ENSMUSG00000039217.14|interleukin 18
mm39_v1_chr3_+_88624145_88624190	0.09459007337074926	Emx1_Emx2	ENSMUST00000029692.15|Rit1|ENSMUSG00000028057.15|Ras-like without CAAX 1	ENSMUST00000171645.8|Rit1|ENSMUSG00000028057.15|Ras-like without CAAX 1
mm39_v1_chr2_+_36575800_36575800	0.09294898701168669	Emx1_Emx2	ENSMUST00000213258.2|Olfr346|ENSMUSG00000094764.3|olfactory receptor 346
mm39_v1_chr14_+_65504067_65504142	0.09258910292526865	Emx1_Emx2	ENSMUST00000224629.2|Fbxo16|ENSMUSG00000034532.10|F-box protein 16
mm39_v1_chr7_+_129193581_129193601	0.0923624741618174	Emx1_Emx2	ENSMUST00000084519.7|Wdr11|ENSMUSG00000042055.14|WD repeat domain 11
mm39_v1_chr17_+_79919267_79919292	0.09212482747310215	Emx1_Emx2	ENSMUST00000223924.2|Rmdn2|ENSMUSG00000036368.9|regulator of microtubule dynamics 2
mm39_v1_chr3_+_108479015_108479015	0.09170931329870725	Emx1_Emx2	ENSMUST00000143054.2|Taf13|ENSMUSG00000048100.14|TATA-box binding protein associated factor 13
mm39_v1_chr14_+_73747454_73747496	0.09093137852818718	Emx1_Emx2	ENSMUST00000022705.7|Med4|ENSMUSG00000022109.7|mediator complex subunit 4
mm39_v1_chr16_-_43836681_43836799	0.08886481145242153	Emx1_Emx2	ENSMUST00000036174.10|Gramd1c|ENSMUSG00000036292.15|GRAM domain containing 1C
mm39_v1_chrX_-_73436293_73436405	0.08870018684398247	Emx1_Emx2	ENSMUST00000114138.8|Fam3a|ENSMUSG00000031399.16|family with sequence similarity 3, member A
mm39_v1_chr12_-_87435091_87435129	0.08749156396811199	Emx1_Emx2	ENSMUST00000021424.5|Sptlc2|ENSMUSG00000021036.11|serine palmitoyltransferase, long chain base subunit 2
mm39_v1_chr4_+_150321272_150321409	0.08640821711038212	Emx1_Emx2	ENSMUST00000080926.13|Eno1|ENSMUSG00000063524.14|enolase 1, alpha non-neuron
mm39_v1_chr1_+_163607143_163607157	0.08529897553296496	Emx1_Emx2	ENSMUST00000077642.12|Kifap3|ENSMUSG00000026585.14|kinesin-associated protein 3	ENSMUST00000027877.7|Kifap3|ENSMUSG00000026585.14|kinesin-associated protein 3
mm39_v1_chr19_-_34143437_34143489	0.08504291507696232	Emx1_Emx2	ENSMUST00000025686.9|Ankrd22|ENSMUSG00000024774.17|ankyrin repeat domain 22
mm39_v1_chr18_-_36859732_36859851	0.08340343013590563	Emx1_Emx2	ENSMUST00000061829.8|Cd14|ENSMUSG00000051439.8|CD14 antigen
mm39_v1_chr19_+_34078333_34078399	0.08314255185866098	Emx1_Emx2	ENSMUST00000025685.8|Lipm|ENSMUSG00000056078.7|lipase, family member M
mm39_v1_chr4_+_41966058_41966058	0.0811246745198214	Emx1_Emx2	ENSMUST00000108026.3|Fam205a4|ENSMUSG00000078746.3|family with sequence similarity 205, member A4
mm39_v1_chr2_+_69619991_69620086	0.08025639419965543	Emx1_Emx2	ENSMUST00000112266.8|Phospho2|ENSMUSG00000027088.11|phosphatase, orphan 2
mm39_v1_chr7_-_104250951_104250986	0.0784176155688122	Emx1_Emx2	ENSMUST00000216750.2|Olfr655|ENSMUSG00000051182.6|olfactory receptor 655	ENSMUST00000215538.2|Olfr655|ENSMUSG00000051182.6|olfactory receptor 655
mm39_v1_chr6_+_68013772_68013802	0.07788424794262656	Emx1_Emx2	ENSMUST00000197515.2|Igkv17-121|ENSMUSG00000076514.4|immunoglobulin kappa variable 17-121	ENSMUST00000103315.3|Igkv17-121|ENSMUSG00000076514.4|immunoglobulin kappa variable 17-121
mm39_v1_chr5_-_87847268_87847286	0.0758288531253044	Emx1_Emx2	ENSMUST00000196869.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000199624.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000198057.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000082370.10|Csn2|ENSMUSG00000063157.10|casein beta
mm39_v1_chr8_-_10027650_10027690	0.07566800588313236	Emx1_Emx2	ENSMUST00000170033.2|Lig4|ENSMUSG00000049717.10|ligase IV, DNA, ATP-dependent
mm39_v1_chr4_-_134495234_134495335	0.07553926171202535	Emx1_Emx2	ENSMUST00000037828.8|Ldlrap1|ENSMUSG00000037295.8|low density lipoprotein receptor adaptor protein 1
mm39_v1_chr19_-_33602652_33602652	0.07485746041994285	Emx1_Emx2	ENSMUST00000124230.3|Gm8978|ENSMUSG00000086812.3|predicted gene 8978
mm39_v1_chrX_-_101200670_101200704	0.07352689055578115	Emx1_Emx2	ENSMUST00000056904.3|Ercc6l|ENSMUSG00000051220.3|excision repair cross-complementing rodent repair deficiency complementation group 6 like
mm39_v1_chr6_+_129510331_129510514	0.07336103142730645	Emx1_Emx2	ENSMUST00000204956.2|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	ENSMUST00000204639.2|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm39_v1_chr5_-_86437119_86437167	0.07210466107841496	Emx1_Emx2	ENSMUST00000196462.2|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c	ENSMUST00000059424.10|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c
mm39_v1_chr11_-_99556781_99556789	0.06833275264456058	Emx1_Emx2	ENSMUST00000100476.3|Krtap4-6|ENSMUSG00000075566.3|keratin associated protein 4-6
mm39_v1_chr1_-_84818223_84818261	0.06639560482395908	Emx1_Emx2	ENSMUST00000186465.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr2_+_110551976_110551993	0.06534940598153458	Emx1_Emx2	ENSMUST00000090332.5|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr7_-_108124272_108124272	0.06358691385216754	Emx1_Emx2	ENSMUST00000216919.2|Olfr502|ENSMUSG00000058014.5|olfactory receptor 502
mm39_v1_chr9_-_15212745_15212846	0.06290048431309533	Emx1_Emx2	ENSMUST00000217042.2|4931406C07Rik|ENSMUSG00000031938.16|RIKEN cDNA 4931406C07 gene
mm39_v1_chr2_-_86589298_86589337	0.06283932697036107	Emx1_Emx2	ENSMUST00000215991.2|Olfr1090|ENSMUSG00000075172.4|olfactory receptor 1090	ENSMUST00000217043.3|Olfr1090|ENSMUSG00000075172.4|olfactory receptor 1090
mm39_v1_chr12_-_114955196_114955202	0.058850571013844666	Emx1_Emx2	ENSMUST00000194865.2|Ighv1-47|ENSMUSG00000076709.3|immunoglobulin heavy variable 1-47
mm39_v1_chr9_+_103917821_103917861	0.05777021292222028	Emx1_Emx2	ENSMUST00000216593.2|Nphp3|ENSMUSG00000032558.20|nephronophthisis 3 (adolescent)	ENSMUST00000147249.3|Gm28305|ENSMUSG00000101152.2|predicted gene 28305
mm39_v1_chr10_-_88440996_88441016	0.05672303162691292	Emx1_Emx2	ENSMUST00000121629.8|Mybpc1|ENSMUSG00000020061.19|myosin binding protein C, slow-type
mm39_v1_chr7_+_10177258_10177258	0.054600892248225855	Emx1_Emx2	ENSMUST00000226237.2|Vmn1r67|ENSMUSG00000046716.8|vomeronasal 1 receptor 67
mm39_v1_chr12_-_113649535_113649665	0.05366882532630794	Emx1_Emx2	ENSMUST00000103449.4|Ighv2-5|ENSMUSG00000096498.4|immunoglobulin heavy variable 2-5	ENSMUST00000195707.3|Ighv2-5|ENSMUSG00000096498.4|immunoglobulin heavy variable 2-5
mm39_v1_chr2_-_86906161_86906161	0.05198167400586165	Emx1_Emx2	ENSMUST00000214049.2|Olfr1107|ENSMUSG00000075163.6|olfactory receptor 1107
mm39_v1_chrX_-_101548965_101549017	0.049488039260715454	Emx1_Emx2	ENSMUST00000087916.11|Hdac8|ENSMUSG00000067567.13|histone deacetylase 8
mm39_v1_chr2_+_110427643_110427661	0.04925908952863086	Emx1_Emx2	ENSMUST00000045972.13|Slc5a12|ENSMUSG00000041644.15|solute carrier family 5 (sodium/glucose cotransporter), member 12	ENSMUST00000111026.3|Slc5a12|ENSMUSG00000041644.15|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm39_v1_chr4_-_146993984_146994047	0.04857908086551926	Emx1_Emx2	ENSMUST00000238583.2|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411	ENSMUST00000049821.4|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411
mm39_v1_chr5_+_107656810_107656810	0.04788092335146933	Emx1_Emx2	ENSMUST00000160160.6|Gm42669|ENSMUSG00000106631.3|predicted gene 42669
mm39_v1_chr9_+_19620729_19620729	0.046830692922517334	Emx1_Emx2	ENSMUST00000217450.4|Olfr857|ENSMUSG00000094678.6|olfactory receptor 857	ENSMUST00000212013.4|Olfr857|ENSMUSG00000094678.6|olfactory receptor 857
mm39_v1_chr11_-_99519057_99519068	0.04660984716333841	Emx1_Emx2	ENSMUST00000081007.7|Krtap4-1|ENSMUSG00000063251.7|keratin associated protein 4-1
mm39_v1_chr2_+_85868891_85868891	0.04515010953320355	Emx1_Emx2	ENSMUST00000218397.2|Olfr1033|ENSMUSG00000045392.9|olfactory receptor 1033
mm39_v1_chr2_-_37249208_37249242	0.04349057579825968	Emx1_Emx2	ENSMUST00000147703.3|Pdcl|ENSMUSG00000009030.15|phosducin-like
mm39_v1_chr10_-_107321938_107321995	0.04316485008234802	Emx1_Emx2	ENSMUST00000000445.2|Myf5|ENSMUSG00000000435.2|myogenic factor 5
mm39_v1_chr9_-_53578729_53578821	0.04167404112207664	Emx1_Emx2	ENSMUST00000166367.8|Cul5|ENSMUSG00000032030.17|cullin 5	ENSMUST00000034529.14|Cul5|ENSMUSG00000032030.17|cullin 5
mm39_v1_chr4_+_147056433_147056433	0.040966476050693666	Emx1_Emx2	ENSMUST00000146688.3|Zfp989|ENSMUSG00000086147.3|zinc finger protein 989
mm39_v1_chr14_+_96118660_96118702	0.04079345133013731	Emx1_Emx2	ENSMUST00000228913.2|Spertl|ENSMUSG00000034689.3|spermatid associated like	ENSMUST00000045892.3|Spertl|ENSMUSG00000034689.3|spermatid associated like
mm39_v1_chr5_-_87240405_87240422	0.04022654468333679	Emx1_Emx2	ENSMUST00000132667.2|Ugt2b36|ENSMUSG00000070704.11|UDP glucuronosyltransferase 2 family, polypeptide B36	ENSMUST00000145617.8|Ugt2b36|ENSMUSG00000070704.11|UDP glucuronosyltransferase 2 family, polypeptide B36	ENSMUST00000094649.11|Ugt2b36|ENSMUSG00000070704.11|UDP glucuronosyltransferase 2 family, polypeptide B36
mm39_v1_chr6_-_116437985_116438102	0.039776328133126364	Emx1_Emx2	ENSMUST00000164547.8|Alox5|ENSMUSG00000025701.13|arachidonate 5-lipoxygenase	ENSMUST00000170186.2|Alox5|ENSMUSG00000025701.13|arachidonate 5-lipoxygenase
mm39_v1_chr19_-_32173824_32173842	0.03957870359641389	Emx1_Emx2	ENSMUST00000151822.2|Sgms1|ENSMUSG00000040451.19|sphingomyelin synthase 1
mm39_v1_chr9_+_14411956_14412182	0.03927826114440469	Emx1_Emx2	ENSMUST00000215143.2|Cwc15|ENSMUSG00000004096.10|CWC15 spliceosome-associated protein
mm39_v1_chr2_-_28473251_28473291	0.037720933736703155	Emx1_Emx2	ENSMUST00000028157.9|Gtf3c5|ENSMUSG00000026816.15|general transcription factor IIIC, polypeptide 5
mm39_v1_chr4_+_146586445_146586484	0.036059053276595116	Emx1_Emx2	ENSMUST00000105735.9|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr10_-_88440869_88440914	0.03532447040628119	Emx1_Emx2	ENSMUST00000119185.8|Mybpc1|ENSMUSG00000020061.19|myosin binding protein C, slow-type	ENSMUST00000238199.2|Mybpc1|ENSMUSG00000020061.19|myosin binding protein C, slow-type
mm39_v1_chr13_+_23343482_23343482	0.035209768735190626	Emx1_Emx2	ENSMUST00000226845.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219	ENSMUST00000228666.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219	ENSMUST00000227388.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219
mm39_v1_chr4_+_52596266_52596278	0.03507757938869004	Emx1_Emx2	ENSMUST00000029995.6|Toporsl|ENSMUSG00000028314.7|topoisomerase I binding, arginine/serine-rich like
mm39_v1_chr7_+_45271229_45271249	0.03456232322699363	Emx1_Emx2	ENSMUST00000033100.5|Izumo1|ENSMUSG00000064158.7|izumo sperm-egg fusion 1
mm39_v1_chr17_-_37404764_37404764	0.034458348107995716	Emx1_Emx2	ENSMUST00000087144.5|Olfr91|ENSMUSG00000095377.3|olfactory receptor 91
mm39_v1_chr3_-_49711706_49711758	0.03423473946519272	Emx1_Emx2	ENSMUST00000191794.2|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr3_-_49711765_49711772	0.03403740768144335	Emx1_Emx2	ENSMUST00000035931.13|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr1_-_106980033_106980075	0.03348020688518556	Emx1_Emx2	ENSMUST00000112717.3|Serpinb3a|ENSMUSG00000044594.15|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A
mm39_v1_chr7_+_107964542_107964542	0.03332631305790474	Emx1_Emx2	ENSMUST00000209743.2|Olfr494|ENSMUSG00000109631.2|olfactory receptor 494
mm39_v1_chr9_+_19691579_19691579	0.032645311210613676	Emx1_Emx2	ENSMUST00000212363.2|Olfr58|ENSMUSG00000058659.7|olfactory receptor 58	ENSMUST00000215112.3|Olfr58|ENSMUSG00000058659.7|olfactory receptor 58
mm39_v1_chr10_+_129493563_129493563	0.032241101314766894	Emx1_Emx2	ENSMUST00000217094.2|Olfr800|ENSMUSG00000108114.3|olfactory receptor 800
mm39_v1_chr19_-_39637489_39637506	0.032221374319807	Emx1_Emx2	ENSMUST00000067328.7|Cyp2c67|ENSMUSG00000062624.6|cytochrome P450, family 2, subfamily c, polypeptide 67
mm39_v1_chr1_+_128079543_128079572	0.03149853200496581	Emx1_Emx2	ENSMUST00000189317.3|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1
mm39_v1_chr3_-_75359125_75359125	0.03105046530868472	Emx1_Emx2	ENSMUST00000204341.3|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49
mm39_v1_chr1_+_88234454_88234481	0.030403912100710268	Emx1_Emx2	ENSMUST00000040210.14|Trpm8|ENSMUSG00000036251.17|transient receptor potential cation channel, subfamily M, member 8
mm39_v1_chr2_-_88559941_88559941	0.02982011877305595	Emx1_Emx2	ENSMUST00000099815.2|Olfr1197|ENSMUSG00000075119.3|olfactory receptor 1197
mm39_v1_chr2_+_85679764_85679764	0.02951326498863076	Emx1_Emx2	ENSMUST00000055840.7|Olfr1020|ENSMUSG00000046975.8|olfactory receptor 1020
mm39_v1_chr19_-_11637880_11637923	0.02940739980274231	Emx1_Emx2	ENSMUST00000135994.2|Oosp2|ENSMUSG00000055895.7|oocyte secreted protein 2	ENSMUST00000121793.2|Oosp2|ENSMUSG00000055895.7|oocyte secreted protein 2
mm39_v1_chr2_-_87488801_87488804	0.028870335013460962	Emx1_Emx2	ENSMUST00000099857.11|Olfr1134|ENSMUSG00000111747.3|olfactory receptor 1134	ENSMUST00000135875.4|Olfr1134|ENSMUSG00000111747.3|olfactory receptor 1134
mm39_v1_chr6_-_131667026_131667026	0.028638802849189803	Emx1_Emx2	ENSMUST00000080619.3|Tas2r114|ENSMUSG00000063478.3|taste receptor, type 2, member 114
mm39_v1_chr4_+_19280850_19280908	0.02822147946009875	Emx1_Emx2	ENSMUST00000102999.2|Cngb3|ENSMUSG00000056494.8|cyclic nucleotide gated channel beta 3
mm39_v1_chr2_+_85612365_85612365	0.02809771485069767	Emx1_Emx2	ENSMUST00000215945.2|Olfr1015|ENSMUSG00000033850.6|olfactory receptor 1015
mm39_v1_chr2_-_111452417_111452417	0.028025283280460684	Emx1_Emx2	ENSMUST00000099612.2|Olfr1297|ENSMUSG00000094858.4|olfactory receptor 1297
mm39_v1_chr14_+_27598021_27598061	0.026934400661811363	Emx1_Emx2	ENSMUST00000211684.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2	ENSMUST00000210924.2|Erc2|ENSMUSG00000040640.12|ELKS/RAB6-interacting/CAST family member 2
mm39_v1_chr19_-_39451509_39451525	0.026429289082139734	Emx1_Emx2	ENSMUST00000035488.3|Cyp2c38|ENSMUSG00000032808.3|cytochrome P450, family 2, subfamily c, polypeptide 38
mm39_v1_chr2_-_87467879_87467879	0.02641573907563326	Emx1_Emx2	ENSMUST00000216082.2|Olfr1132|ENSMUSG00000068818.6|olfactory receptor 1132
mm39_v1_chrX_+_151909893_151909893	0.025885197570084034	Emx1_Emx2	ENSMUST00000163801.2|Foxr2|ENSMUSG00000071665.11|forkhead box R2
mm39_v1_chr7_+_107992374_107992374	0.02583426183706419	Emx1_Emx2	ENSMUST00000215215.2|Olfr495|ENSMUSG00000110253.3|olfactory receptor 495
mm39_v1_chr4_+_145237329_145237361	0.02552625791842253	Emx1_Emx2	ENSMUST00000105742.8|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990	ENSMUST00000136309.8|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990
mm39_v1_chr10_-_129781929_129781929	0.025238691841281233	Emx1_Emx2	ENSMUST00000074308.3|Olfr818|ENSMUSG00000058071.5|olfactory receptor 818
mm39_v1_chr2_-_86488800_86488800	0.024449248797468633	Emx1_Emx2	ENSMUST00000099879.2|Olfr1085|ENSMUSG00000075176.4|olfactory receptor 1085
mm39_v1_chr2_-_88854443_88854443	0.02413721396259714	Emx1_Emx2	ENSMUST00000099799.5|Olfr1217|ENSMUSG00000101391.4|olfactory receptor 1217
mm39_v1_chr18_+_37488174_37488324	0.02396242479218416	Emx1_Emx2	ENSMUST00000192867.2|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8	ENSMUST00000051163.3|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8
mm39_v1_chr2_-_111945785_111945785	0.023513281537796315	Emx1_Emx2	ENSMUST00000207542.3|Olfr1315-ps1|ENSMUSG00000109033.3|olfactory receptor 1315, pseudogene 1
mm39_v1_chr10_+_101994841_101994940	0.023220926246550488	Emx1_Emx2	ENSMUST00000020039.13|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr10_-_128904846_128904846	0.022955603452557264	Emx1_Emx2	ENSMUST00000204515.3|Olfr766-ps1|ENSMUSG00000107748.5|olfactory receptor 766, pseudogene 1
mm39_v1_chr19_-_39729431_39729498	0.022348979819259384	Emx1_Emx2	ENSMUST00000099472.4|Cyp2c68|ENSMUSG00000074882.4|cytochrome P450, family 2, subfamily c, polypeptide 68
mm39_v1_chr2_+_111581351_111581351	0.022125159905635745	Emx1_Emx2	ENSMUST00000207590.4|Olfr1301|ENSMUSG00000057149.5|olfactory receptor 1301
mm39_v1_chr9_+_18944031_18944031	0.021762650603813487	Emx1_Emx2	ENSMUST00000213018.3|Olfr835|ENSMUSG00000045204.5|olfactory receptor 835
mm39_v1_chr17_+_47083561_47083561	0.021511429614989006	Emx1_Emx2	ENSMUST00000071430.7|2310039H08Rik|ENSMUSG00000062619.7|RIKEN cDNA 2310039H08 gene
mm39_v1_chr11_+_73489420_73489420	0.02072325151988732	Emx1_Emx2	ENSMUST00000214228.2|Olfr384|ENSMUSG00000060335.3|olfactory receptor 384
mm39_v1_chrX_+_8137372_8137418	0.020678612862789582	Emx1_Emx2	ENSMUST00000127103.8|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5	ENSMUST00000115591.8|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5
mm39_v1_chr8_+_55053809_55053839	0.02045137752520625	Emx1_Emx2	ENSMUST00000033917.7|Spata4|ENSMUSG00000031518.7|spermatogenesis associated 4
mm39_v1_chr5_+_88523967_88523967	0.02022029568362589	Emx1_Emx2	ENSMUST00000073363.2|Amtn|ENSMUSG00000029282.4|amelotin
mm39_v1_chr6_+_114435480_114435480	0.020209978224926275	Emx1_Emx2	ENSMUST00000160780.2|Hrh1|ENSMUSG00000053004.10|histamine receptor H1
mm39_v1_chr19_-_55229668_55229668	0.02017228451541748	Emx1_Emx2	ENSMUST00000069183.8|Gucy2g|ENSMUSG00000055523.8|guanylate cyclase 2g
mm39_v1_chr7_-_10347586_10347586	0.02009349653289572	Emx1_Emx2	ENSMUST00000226190.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000226228.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000228296.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000228638.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000176707.3|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000176284.9|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000226160.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000227853.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69	ENSMUST00000228478.2|Vmn1r69|ENSMUSG00000091662.10|vomeronasal 1 receptor 69
mm39_v1_chr7_+_130936227_130936268	0.019964122198454927	Emx1_Emx2	ENSMUST00000207784.2|Fam24a|ENSMUSG00000030859.9|family with sequence similarity 24, member A
mm39_v1_chr2_-_37537224_37537297	0.01990133918381576	Emx1_Emx2	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr2_-_87773970_87773970	0.019827098825805096	Emx1_Emx2	ENSMUST00000099843.2|Olfr1155|ENSMUSG00000075145.3|olfactory receptor 1155
mm39_v1_chr16_-_19385631_19385631	0.019489020615626667	Emx1_Emx2	ENSMUST00000090062.2|Olfr169|ENSMUSG00000068535.3|olfactory receptor 169
mm39_v1_chr16_-_19443851_19443851	0.019373248946472556	Emx1_Emx2	ENSMUST00000079891.4|Olfr171|ENSMUSG00000060480.6|olfactory receptor 171
mm39_v1_chr17_-_20455134_20455134	0.019281121249499277	Emx1_Emx2	ENSMUST00000167382.2|Vmn2r105|ENSMUSG00000091670.4|vomeronasal 2, receptor 105
mm39_v1_chr10_-_129784956_129784969	0.019221266213501176	Emx1_Emx2	ENSMUST00000215527.2|Olfr818|ENSMUSG00000058071.5|olfactory receptor 818	ENSMUST00000205227.2|Olfr818|ENSMUSG00000058071.5|olfactory receptor 818
mm39_v1_chr18_-_34712123_34712183	0.01820146233258332	Emx1_Emx2	ENSMUST00000079287.12|Nme5|ENSMUSG00000035984.15|NME/NM23 family member 5
mm39_v1_chr10_-_129013790_129013790	0.017712144213798686	Emx1_Emx2	ENSMUST00000214672.2|Olfr772|ENSMUSG00000107662.3|olfactory receptor 772
mm39_v1_chr2_-_86372824_86372824	0.017614219770177256	Emx1_Emx2	ENSMUST00000216480.2|Olfr1079|ENSMUSG00000075179.4|olfactory receptor 1079	ENSMUST00000111582.3|Olfr1079|ENSMUSG00000075179.4|olfactory receptor 1079
mm39_v1_chr6_-_131637112_131637112	0.01753652663743483	Emx1_Emx2	ENSMUST00000065781.5|Tas2r107|ENSMUSG00000053389.5|taste receptor, type 2, member 107
mm39_v1_chr16_-_59022882_59022882	0.017158155783162415	Emx1_Emx2	ENSMUST00000064452.3|Olfr198|ENSMUSG00000052537.5|olfactory receptor 198
mm39_v1_chr2_-_28473150_28473201	0.017123817930096156	Emx1_Emx2	ENSMUST00000113889.9|Gtf3c5|ENSMUSG00000026816.15|general transcription factor IIIC, polypeptide 5
mm39_v1_chr3_-_144738526_144738543	0.016980752621780736	Emx1_Emx2	ENSMUST00000029919.7|Clca1|ENSMUSG00000028255.7|chloride channel accessory 1
mm39_v1_chr8_-_65489834_65489988	0.01684102735835668	Emx1_Emx2	ENSMUST00000142822.4|Apela|ENSMUSG00000079042.11|apelin receptor early endogenous ligand
mm39_v1_chrX_-_104918911_104919032	0.01680064763902323	Emx1_Emx2	ENSMUST00000200471.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr2_-_85992176_85992182	0.01642563629087	Emx1_Emx2	ENSMUST00000099908.6|Olfr1042|ENSMUSG00000075202.6|olfactory receptor 1042	ENSMUST00000215624.2|Olfr1042|ENSMUSG00000075202.6|olfactory receptor 1042
mm39_v1_chr3_-_63758672_63758780	0.01624812570970517	Emx1_Emx2	ENSMUST00000162269.9|Plch1|ENSMUSG00000036834.17|phospholipase C, eta 1	ENSMUST00000159676.9|Plch1|ENSMUSG00000036834.17|phospholipase C, eta 1	ENSMUST00000175947.8|Plch1|ENSMUSG00000036834.17|phospholipase C, eta 1
mm39_v1_chr7_+_23331413_23331413	0.016244606242927926	Emx1_Emx2	ENSMUST00000078458.4|Vmn1r171|ENSMUSG00000062483.5|vomeronasal 1 receptor 171
mm39_v1_chr12_-_114186874_114186953	0.016142898362680045	Emx1_Emx2	ENSMUST00000103477.4|Ighv7-4|ENSMUSG00000076668.5|immunoglobulin heavy variable 7-4	ENSMUST00000192499.3|Ighv7-4|ENSMUSG00000076668.5|immunoglobulin heavy variable 7-4
mm39_v1_chr4_+_127019826_127019873	0.016138539507849346	Emx1_Emx2	ENSMUST00000094712.5|Tmem35b|ENSMUSG00000070737.11|transmembrane protein 35B
mm39_v1_chr12_+_74044435_74044519	0.01610269258251262	Emx1_Emx2	ENSMUST00000221220.2|Syt16|ENSMUSG00000044912.12|synaptotagmin XVI
mm39_v1_chr6_-_144993362_144993387	0.016035134806667815	Emx1_Emx2	ENSMUST00000149769.6|Bcat1|ENSMUSG00000030268.18|branched chain aminotransferase 1, cytosolic
mm39_v1_chr9_+_39630525_39630525	0.015968721242188098	Emx1_Emx2	ENSMUST00000069342.2|Olfr965|ENSMUSG00000095839.4|olfactory receptor 965
mm39_v1_chrX_+_110801086_110801086	0.015929733792977175	Emx1_Emx2	ENSMUST00000207962.2|Gm45194|ENSMUSG00000109156.2|predicted gene 45194
mm39_v1_chr15_-_101422054_101422054	0.01555408863360852	Emx1_Emx2	ENSMUST00000230067.3|Gm49425|ENSMUSG00000116336.3|predicted gene, 49425
mm39_v1_chr16_-_16494269_16494269	0.015462647252442431	Emx1_Emx2	ENSMUST00000206365.3|Olfr19|ENSMUSG00000048101.7|olfactory receptor 19
mm39_v1_chr2_-_88818544_88818544	0.015390583803962056	Emx1_Emx2	ENSMUST00000099804.2|Olfr1214|ENSMUSG00000075110.3|olfactory receptor 1214
mm39_v1_chr4_+_147637714_147637796	0.015204095101391892	Emx1_Emx2	ENSMUST00000139784.8|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985	ENSMUST00000143885.8|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985	ENSMUST00000081742.7|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985
mm39_v1_chr17_+_37777099_37777099	0.015015244082769502	Emx1_Emx2	ENSMUST00000031086.5|Olfr109|ENSMUSG00000029184.6|olfactory receptor 109
mm39_v1_chr7_-_103170053_103170053	0.015010899144518808	Emx1_Emx2	ENSMUST00000216074.2|Olfr611|ENSMUSG00000096584.3|olfactory receptor 611
mm39_v1_chr3_+_137046828_137046916	0.014797876402029517	Emx1_Emx2	ENSMUST00000122064.8|Emcn|ENSMUSG00000054690.18|endomucin	ENSMUST00000119475.6|Emcn|ENSMUSG00000054690.18|endomucin
mm39_v1_chr7_+_104529916_104529916	0.014505660608086486	Emx1_Emx2	ENSMUST00000098165.2|Olfr665|ENSMUSG00000073917.3|olfactory receptor 665
mm39_v1_chr6_-_144155167_144155195	0.014464300745863854	Emx1_Emx2	ENSMUST00000077160.12|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr7_-_103718362_103718362	0.014285847835558073	Emx1_Emx2	ENSMUST00000077417.3|Olfr644|ENSMUSG00000110012.3|olfactory receptor 644
mm39_v1_chr7_-_86046950_86046997	0.014206991583367906	Emx1_Emx2	ENSMUST00000215532.2|Olfr303|ENSMUSG00000039608.7|olfactory receptor 303	ENSMUST00000216409.2|Olfr303|ENSMUSG00000039608.7|olfactory receptor 303
mm39_v1_chr1_-_179527845_179527845	0.01413499308227572	Emx1_Emx2	ENSMUST00000223392.2|Kif28|ENSMUSG00000087236.4|kinesin family member 28
mm39_v1_chr10_+_102376109_102376142	0.01407052054234056	Emx1_Emx2	ENSMUST00000055355.6|Rassf9|ENSMUSG00000044921.6|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
mm39_v1_chr6_-_57002309_57002309	0.01390985830720555	Emx1_Emx2	ENSMUST00000176252.2|Vmn1r7|ENSMUSG00000093696.2|vomeronasal 1 receptor 7
mm39_v1_chr1_-_139708906_139709001	0.013749161867887893	Emx1_Emx2	ENSMUST00000111986.8|Cfhr4|ENSMUSG00000070594.11|complement factor H-related 4	ENSMUST00000027612.11|Cfhr4|ENSMUSG00000070594.11|complement factor H-related 4	ENSMUST00000111989.9|Cfhr4|ENSMUSG00000070594.11|complement factor H-related 4
mm39_v1_chr9_+_18855946_18855946	0.013728358448569455	Emx1_Emx2	ENSMUST00000060601.5|Olfr832|ENSMUSG00000095957.3|olfactory receptor 832
mm39_v1_chr2_-_88928307_88928307	0.013723414434517025	Emx1_Emx2	ENSMUST00000099789.5|Olfr1220|ENSMUSG00000101480.4|olfactory receptor 1220
mm39_v1_chr6_+_57086439_57086439	0.013721652786933545	Emx1_Emx2	ENSMUST00000228270.2|Vmn1r10|ENSMUSG00000115181.2|vomeronasal 1 receptor 10
mm39_v1_chr7_-_142215595_142215617	0.013718752127802908	Emx1_Emx2	ENSMUST00000145896.3|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr7_-_104812698_104812860	0.013656143164728896	Emx1_Emx2	ENSMUST00000215552.2|Olfr684|ENSMUSG00000047225.9|olfactory receptor 684	ENSMUST00000215744.2|Olfr684|ENSMUSG00000047225.9|olfactory receptor 684	ENSMUST00000217136.2|Olfr684|ENSMUSG00000047225.9|olfactory receptor 684
mm39_v1_chr1_-_157084252_157084272	0.013317238485142307	Emx1_Emx2	ENSMUST00000134543.8|Rasal2|ENSMUSG00000070565.12|RAS protein activator like 2
mm39_v1_chr8_+_82499732_82499750	0.01330241808329024	Emx1_Emx2	ENSMUST00000170160.8|Inpp4b|ENSMUSG00000037940.18|inositol polyphosphate-4-phosphatase, type II
mm39_v1_chr14_+_50645025_50645025	0.013270379821702701	Emx1_Emx2	ENSMUST00000214853.2|Olfr738|ENSMUSG00000094692.3|olfactory receptor 738	ENSMUST00000214320.2|Olfr738|ENSMUSG00000094692.3|olfactory receptor 738
mm39_v1_chr7_+_107994038_107994038	0.01298319092632373	Emx1_Emx2	ENSMUST00000210990.2|Olfr495|ENSMUSG00000110253.3|olfactory receptor 495
mm39_v1_chrX_-_133012457_133012537	0.012895830404701382	Emx1_Emx2	ENSMUST00000159259.3|Nox1|ENSMUSG00000031257.15|NADPH oxidase 1	ENSMUST00000113275.10|Nox1|ENSMUSG00000031257.15|NADPH oxidase 1
mm39_v1_chr9_+_110948492_110948516	0.012775311683788006	Emx1_Emx2	ENSMUST00000217341.3|Lrrfip2|ENSMUSG00000032497.20|leucine rich repeat (in FLII) interacting protein 2
mm39_v1_chrX_-_159777661_159777700	0.012722449845951757	Emx1_Emx2	ENSMUST00000087104.11|Cdkl5|ENSMUSG00000031292.15|cyclin-dependent kinase-like 5
mm39_v1_chr14_+_53562089_53562089	0.01267463740448463	Emx1_Emx2	ENSMUST00000178100.3|Trav7n-6|ENSMUSG00000105080.2|T cell receptor alpha variable 7N-6
mm39_v1_chr17_-_37481536_37481536	0.012570249704703348	Emx1_Emx2	ENSMUST00000174673.3|Olfr753-ps1|ENSMUSG00000090556.6|olfactory receptor 753, pseudogene 1
mm39_v1_chr16_-_16647139_16647215	0.012538397310001477	Emx1_Emx2	ENSMUST00000023468.6|Spag6l|ENSMUSG00000022783.12|sperm associated antigen 6-like
mm39_v1_chr11_-_99742434_99742458	0.012537312193382262	Emx1_Emx2	ENSMUST00000107437.2|Krtap4-16|ENSMUSG00000046474.10|keratin associated protein 4-16
mm39_v1_chr4_+_150999019_150999071	0.012441954129486314	Emx1_Emx2	ENSMUST00000135169.8|Tnfrsf9|ENSMUSG00000028965.14|tumor necrosis factor receptor superfamily, member 9
mm39_v1_chr16_-_19425453_19425453	0.012298653392505094	Emx1_Emx2	ENSMUST00000078603.3|Olfr170|ENSMUSG00000062245.5|olfactory receptor 170	ENSMUST00000218837.2|Olfr170|ENSMUSG00000062245.5|olfactory receptor 170
mm39_v1_chr8_+_94537910_94537946	0.012182442659530557	Emx1_Emx2	ENSMUST00000138659.9|Gnao1|ENSMUSG00000031748.17|guanine nucleotide binding protein, alpha O
mm39_v1_chr12_-_118930130_118930156	0.01214785747961188	Emx1_Emx2	ENSMUST00000035515.5|Abcb5|ENSMUSG00000072791.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
mm39_v1_chr17_-_40630096_40630099	0.012073539142524584	Emx1_Emx2	ENSMUST00000026498.5|Crisp1|ENSMUSG00000025431.5|cysteine-rich secretory protein 1
mm39_v1_chr1_-_84817022_84817042	0.012067153838244686	Emx1_Emx2	ENSMUST00000189496.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12	ENSMUST00000027421.13|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12	ENSMUST00000186894.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr5_-_89605622_89605757	0.011720768819187287	Emx1_Emx2	ENSMUST00000049209.13|Gc|ENSMUSG00000035540.13|vitamin D binding protein
mm39_v1_chr17_+_38640722_38640744	0.011421533655067007	Emx1_Emx2	ENSMUST00000208539.3|Olfr136|ENSMUSG00000096840.4|olfactory receptor 136	ENSMUST00000208525.3|Olfr136|ENSMUSG00000096840.4|olfactory receptor 136	ENSMUST00000214035.2|Olfr136|ENSMUSG00000096840.4|olfactory receptor 136	ENSMUST00000216963.2|Olfr136|ENSMUSG00000096840.4|olfactory receptor 136
mm39_v1_chr2_-_89172742_89172742	0.011298344639481664	Emx1_Emx2	ENSMUST00000216561.2|Olfr1233|ENSMUSG00000075091.6|olfactory receptor 1233
mm39_v1_chr11_+_73262072_73262072	0.011249140931758592	Emx1_Emx2	ENSMUST00000078952.9|Olfr376|ENSMUSG00000063881.12|olfactory receptor 376	ENSMUST00000120401.9|Olfr376|ENSMUSG00000063881.12|olfactory receptor 376	ENSMUST00000170592.4|Olfr376|ENSMUSG00000063881.12|olfactory receptor 376
mm39_v1_chr12_+_87541491_87541491	0.011216813706150892	Emx1_Emx2	ENSMUST00000220499.2|Eif1ad12|ENSMUSG00000113805.2|eukaryotic translation initiation factor 1A domain containing 12
mm39_v1_chr4_+_146093394_146093394	0.010763095797041171	Emx1_Emx2	ENSMUST00000168483.9|Zfp600|ENSMUSG00000066007.16|zinc finger protein 600
mm39_v1_chr11_-_99684173_99684293	0.010730737131217204	Emx1_Emx2	ENSMUST00000105058.2|Gm11596|ENSMUSG00000078261.2|predicted gene 11596
mm39_v1_chr19_-_12868022_12868022	0.010594581855366885	Emx1_Emx2	ENSMUST00000081236.3|Olfr1446|ENSMUSG00000057817.7|olfactory receptor 1446
mm39_v1_chr8_+_45960931_45960955	0.010496296622907308	Emx1_Emx2	ENSMUST00000171337.10|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000067107.15|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr4_+_88768324_88768324	0.010417274396135935	Emx1_Emx2	ENSMUST00000094972.2|Ifna1|ENSMUSG00000095498.2|interferon alpha 1
mm39_v1_chr9_-_73876182_73876281	0.010259917541283648	Emx1_Emx2	ENSMUST00000184666.8|Unc13c|ENSMUSG00000062151.14|unc-13 homolog C
mm39_v1_chr2_+_87820457_87820457	0.010073673749734287	Emx1_Emx2	ENSMUST00000102622.2|Olfr1158|ENSMUSG00000062793.7|olfactory receptor 1158
mm39_v1_chrY_+_80146479_80146479	0.010058527413910598	Emx1_Emx2	ENSMUST00000179811.2|Gm21760|ENSMUSG00000095578.8|predicted gene, 21760
mm39_v1_chr1_-_162913210_162913242	0.009844731910973509	Emx1_Emx2	ENSMUST00000096608.5|Mroh9|ENSMUSG00000071890.5|maestro heat-like repeat family member 9
mm39_v1_chr7_-_103778992_103779033	0.009696752668496275	Emx1_Emx2	ENSMUST00000053743.6|Ubqln5|ENSMUSG00000055643.5|ubiquilin 5
mm39_v1_chr6_-_30936013_30936013	0.00968559771772509	Emx1_Emx2	ENSMUST00000101589.5|Klf14|ENSMUSG00000073209.5|Kruppel-like factor 14
mm39_v1_chr3_-_86827640_86827656	0.009671079239801943	Emx1_Emx2	ENSMUST00000195561.6|Dclk2|ENSMUSG00000028078.15|doublecortin-like kinase 2
mm39_v1_chr19_-_39875192_39875243	0.009448736329433638	Emx1_Emx2	ENSMUST00000168838.3|Cyp2c69|ENSMUSG00000092008.3|cytochrome P450, family 2, subfamily c, polypeptide 69
mm39_v1_chr3_+_132335575_132335592	0.00938881107066177	Emx1_Emx2	ENSMUST00000212804.2|Gimd1|ENSMUSG00000091721.5|GIMAP family P-loop NTPase domain containing 1	ENSMUST00000212852.2|Gimd1|ENSMUSG00000091721.5|GIMAP family P-loop NTPase domain containing 1
mm39_v1_chr19_+_27194411_27194443	0.009271070042377474	Emx1_Emx2	ENSMUST00000164746.8|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor	ENSMUST00000172302.8|Vldlr|ENSMUSG00000024924.15|very low density lipoprotein receptor
mm39_v1_chr7_+_106443820_106443820	0.009127289567466517	Emx1_Emx2	ENSMUST00000098142.4|Olfr703|ENSMUSG00000073901.5|olfactory receptor 703
mm39_v1_chr6_+_40419797_40419871	0.009013959163583204	Emx1_Emx2	ENSMUST00000038907.9|Wee2|ENSMUSG00000037159.12|WEE1 homolog 2 (S. pombe)	ENSMUST00000141490.2|Wee2|ENSMUSG00000037159.12|WEE1 homolog 2 (S. pombe)
mm39_v1_chr9_-_117843228_117843228	0.008854231477708684	Emx1_Emx2	ENSMUST00000187803.3|Zcwpw2|ENSMUSG00000032443.18|zinc finger, CW type with PWWP domain 2
mm39_v1_chr11_-_103395423_103395423	0.008729455717652048	Emx1_Emx2	ENSMUST00000153273.3|Lrrc37a|ENSMUSG00000078632.5|leucine rich repeat containing 37A
mm39_v1_chr2_+_87218000_87218000	0.008659111122525194	Emx1_Emx2	ENSMUST00000056435.5|Olfr1122|ENSMUSG00000047594.5|olfactory receptor 1122
mm39_v1_chr6_-_144993451_144993579	0.008634960361863142	Emx1_Emx2	ENSMUST00000123930.8|Bcat1|ENSMUSG00000030268.18|branched chain aminotransferase 1, cytosolic
mm39_v1_chr7_-_6505319_6505324	0.008444202967975238	Emx1_Emx2	ENSMUST00000208066.3|Olfr1348|ENSMUSG00000093877.5|olfactory receptor 1348	ENSMUST00000086319.5|Olfr1348|ENSMUSG00000093877.5|olfactory receptor 1348
mm39_v1_chr16_-_63684477_63684545	0.008406704209193492	Emx1_Emx2	ENSMUST00000232654.2|Epha3|ENSMUSG00000052504.8|Eph receptor A3	ENSMUST00000064405.8|Epha3|ENSMUSG00000052504.8|Eph receptor A3
mm39_v1_chr2_+_85904336_85904336	0.008402042195701365	Emx1_Emx2	ENSMUST00000164985.4|Olfr1036|ENSMUSG00000099820.3|olfactory receptor 1036
mm39_v1_chr16_+_22737227_22737249	0.008189040178912626	Emx1_Emx2	ENSMUST00000231880.2|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chrY_+_52778041_52778041	0.008133313640884609	Emx1_Emx2	ENSMUST00000178673.2|Gm21258|ENSMUSG00000095606.8|predicted gene, 21258
mm39_v1_chr1_-_83037090_83037099	0.008118820506529864	Emx1_Emx2	ENSMUST00000193762.2|A030005K14Rik|ENSMUSG00000104423.2|RIKEN cDNA A030005K14 gene
mm39_v1_chr17_+_37977879_37977879	0.008034792353803867	Emx1_Emx2	ENSMUST00000215811.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr16_-_63684425_63684443	0.007914410833874999	Emx1_Emx2	ENSMUST00000232049.2|Epha3|ENSMUSG00000052504.8|Eph receptor A3
mm39_v1_chr7_-_103289443_103289443	0.007503065239076413	Emx1_Emx2	ENSMUST00000058744.5|Olfr622|ENSMUSG00000050085.6|olfactory receptor 622
mm39_v1_chr4_-_112632013_112632030	0.007463512208238776	Emx1_Emx2	ENSMUST00000060327.4|Skint10|ENSMUSG00000048766.7|selection and upkeep of intraepithelial T cells 10
mm39_v1_chr11_-_99706484_99706492	0.007258543156237282	Emx1_Emx2	ENSMUST00000105055.2|Gm11564|ENSMUSG00000078258.2|predicted gene 11564
mm39_v1_chr2_-_12424189_12424211	0.007233255775886658	Emx1_Emx2	ENSMUST00000124515.2|Mindy3|ENSMUSG00000026767.13|MINDY lysine 48 deubiquitinase 3
mm39_v1_chr11_+_58721982_58721982	0.007079558682567118	Emx1_Emx2	ENSMUST00000078217.2|Olfr312|ENSMUSG00000096806.3|olfactory receptor 312
mm39_v1_chr2_+_87663385_87663385	0.006799501727442439	Emx1_Emx2	ENSMUST00000077580.2|Olfr1148|ENSMUSG00000061875.3|olfactory receptor 1148
mm39_v1_chrY_+_2904133_2904133	0.0066503685232511475	Emx1_Emx2	ENSMUST00000166474.3|Gm10352|ENSMUSG00000091987.9|predicted gene 10352
mm39_v1_chr19_-_39801188_39801258	0.006557460955219291	Emx1_Emx2	ENSMUST00000162507.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000160476.9|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000239028.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40
mm39_v1_chr2_+_36624331_36624331	0.006520992933781412	Emx1_Emx2	ENSMUST00000078761.5|Olfr347|ENSMUSG00000111863.3|olfactory receptor 347
mm39_v1_chr7_+_102526329_102526329	0.006395367128989177	Emx1_Emx2	ENSMUST00000098216.2|Olfr568|ENSMUSG00000073965.2|olfactory receptor 568
mm39_v1_chr2_+_36311412_36311412	0.005891159080108952	Emx1_Emx2	ENSMUST00000071437.2|Olfr339|ENSMUSG00000094464.3|olfactory receptor 339
mm39_v1_chr4_+_34893772_34893788	0.005888166060163217	Emx1_Emx2	ENSMUST00000029975.10|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit	ENSMUST00000135871.8|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit	ENSMUST00000108130.2|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit
mm39_v1_chr17_-_34563531_34563619	0.005765603260271254	Emx1_Emx2	ENSMUST00000235482.2|H2-Ea|ENSMUSG00000036322.12|histocompatibility 2, class II antigen E alpha
mm39_v1_chrX_-_73618494_73618494	0.005707071239347835	Emx1_Emx2	ENSMUST00000059880.7|Olfr1326-ps1|ENSMUSG00000043715.13|olfactory receptor 1326, pseudogene 1
mm39_v1_chr6_+_42788873_42788873	0.005704609050757406	Emx1_Emx2	ENSMUST00000218832.2|Olfr450|ENSMUSG00000054431.5|olfactory receptor 450
mm39_v1_chr2_+_74552322_74552418	0.005656682903370369	Emx1_Emx2	ENSMUST00000047904.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr18_-_39000056_39000070	0.005514821888455289	Emx1_Emx2	ENSMUST00000236630.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000237356.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr10_+_129357661_129357661	0.005496957510424438	Emx1_Emx2	ENSMUST00000217228.2|Olfr791|ENSMUSG00000047626.5|olfactory receptor 791
mm39_v1_chr2_-_89555356_89555356	0.005444697648324864	Emx1_Emx2	ENSMUST00000216203.2|Olfr1252|ENSMUSG00000110819.2|olfactory receptor 1252	ENSMUST00000213196.2|Olfr1252|ENSMUSG00000110819.2|olfactory receptor 1252
mm39_v1_chrX_+_122485983_122485983	0.0053041288665519985	Emx1_Emx2	ENSMUST00000238499.2|Cldn34c2|ENSMUSG00000095474.3|claudin 34C2
mm39_v1_chr11_-_49004584_49004584	0.005295508009349165	Emx1_Emx2	ENSMUST00000203007.2|Olfr1396|ENSMUSG00000047511.7|olfactory receptor 1396
mm39_v1_chr12_+_36364136_36364147	0.005274793653125886	Emx1_Emx2	ENSMUST00000041407.7|Sostdc1|ENSMUSG00000036169.7|sclerostin domain containing 1
mm39_v1_chr13_+_4486105_4486145	0.00524045242626018	Emx1_Emx2	ENSMUST00000156277.2|Akr1c6|ENSMUSG00000021210.17|aldo-keto reductase family 1, member C6
mm39_v1_chr19_+_13631810_13631810	0.0052130618291543595	Emx1_Emx2	ENSMUST00000080162.2|Olfr1490|ENSMUSG00000061387.4|olfactory receptor 1490
mm39_v1_chr4_+_114020656_114020667	0.005208136379578712	Emx1_Emx2	ENSMUST00000145797.8|Skint11|ENSMUSG00000057977.11|selection and upkeep of intraepithelial T cells 11	ENSMUST00000151810.2|Skint11|ENSMUSG00000057977.11|selection and upkeep of intraepithelial T cells 11
mm39_v1_chr1_-_144052997_144053110	0.0051375862475779585	Emx1_Emx2	ENSMUST00000111941.2|Rgs13|ENSMUSG00000051079.9|regulator of G-protein signaling 13	ENSMUST00000052375.8|Rgs13|ENSMUSG00000051079.9|regulator of G-protein signaling 13
mm39_v1_chr11_-_73480562_73480562	0.005012161461912366	Emx1_Emx2	ENSMUST00000071553.2|Olfr385|ENSMUSG00000095095.3|olfactory receptor 385
mm39_v1_chr12_-_12990584_12990617	0.0049875259929683235	Emx1_Emx2	ENSMUST00000130990.2|Mycn|ENSMUSG00000037169.16|v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
mm39_v1_chr10_-_39039790_39039790	0.0047046449619881645	Emx1_Emx2	ENSMUST00000076713.6|Ccn6|ENSMUSG00000062074.8|cellular communication network factor 6
mm39_v1_chr9_+_51027300_51027306	0.0045885450420117425	Emx1_Emx2	ENSMUST00000114431.4|Btg4|ENSMUSG00000032056.11|BTG anti-proliferation factor 4	ENSMUST00000213117.2|Btg4|ENSMUSG00000032056.11|BTG anti-proliferation factor 4
mm39_v1_chr7_+_108019628_108019628	0.004571705932352065	Emx1_Emx2	ENSMUST00000213521.3|Olfr497|ENSMUSG00000095239.5|olfactory receptor 497
mm39_v1_chr10_+_101517556_101517607	0.0042036897319816325	Emx1_Emx2	ENSMUST00000156751.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr11_+_72580823_72580841	0.0041001075851069945	Emx1_Emx2	ENSMUST00000155998.2|Ankfy1|ENSMUSG00000020790.15|ankyrin repeat and FYVE domain containing 1
mm39_v1_chr12_-_64521464_64521464	0.0040721772942859755	Emx1_Emx2	ENSMUST00000059833.8|Fscb|ENSMUSG00000043060.9|fibrous sheath CABYR binding protein
mm39_v1_chr4_-_112632057_112632068	0.003996831328151493	Emx1_Emx2	ENSMUST00000068851.6|Skint10|ENSMUSG00000048766.7|selection and upkeep of intraepithelial T cells 10
mm39_v1_chr9_+_39903409_39903409	0.003902524398108854	Emx1_Emx2	ENSMUST00000217600.2|Olfr978|ENSMUSG00000044292.5|olfactory receptor 978
mm39_v1_chr14_+_50690511_50690511	0.0038710828546645857	Emx1_Emx2	ENSMUST00000089838.2|Olfr740|ENSMUSG00000095917.3|olfactory receptor 740
mm39_v1_chr4_+_114020581_114020630	0.0038510262899053836	Emx1_Emx2	ENSMUST00000079915.10|Skint11|ENSMUSG00000057977.11|selection and upkeep of intraepithelial T cells 11	ENSMUST00000164297.8|Skint11|ENSMUSG00000057977.11|selection and upkeep of intraepithelial T cells 11
mm39_v1_chr17_-_38366482_38366482	0.003844858791225643	Emx1_Emx2	ENSMUST00000122318.4|Olfr129|ENSMUSG00000081724.5|olfactory receptor 129
mm39_v1_chrX_-_24639814_24639814	0.0038142560830106147	Emx1_Emx2	ENSMUST00000178986.2|Gm5935|ENSMUSG00000093923.8|predicted gene 5935
mm39_v1_chr10_+_101994719_101994750	0.003675613413439964	Emx1_Emx2	ENSMUST00000138522.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C	ENSMUST00000163753.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C	ENSMUST00000138016.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr16_+_22737128_22737135	0.003663233210665889	Emx1_Emx2	ENSMUST00000170805.9|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr19_-_12069216_12069377	0.0036555935624195154	Emx1_Emx2	ENSMUST00000208703.3|Olfr1426|ENSMUSG00000044994.11|olfactory receptor 1426	ENSMUST00000219005.2|Olfr1426|ENSMUSG00000044994.11|olfactory receptor 1426	ENSMUST00000219155.2|Olfr1426|ENSMUSG00000044994.11|olfactory receptor 1426	ENSMUST00000217952.2|Olfr1426|ENSMUSG00000044994.11|olfactory receptor 1426	ENSMUST00000112952.4|Olfr1426|ENSMUSG00000044994.11|olfactory receptor 1426
mm39_v1_chr7_+_86109129_86109129	0.0036438957900723707	Emx1_Emx2	ENSMUST00000217253.2|Olfr299|ENSMUSG00000020168.6|olfactory receptor 299
mm39_v1_chr3_+_127426783_127426789	0.0036435450696839754	Emx1_Emx2	ENSMUST00000029587.9|Neurog2|ENSMUSG00000027967.9|neurogenin 2
mm39_v1_chr7_-_104545159_104545159	0.003518673751356783	Emx1_Emx2	ENSMUST00000214757.2|Olfr666|ENSMUSG00000063582.3|olfactory receptor 666
mm39_v1_chr14_-_8798841_8798896	0.003369134553804768	Emx1_Emx2	ENSMUST00000061045.3|Sntn|ENSMUSG00000044772.3|sentan, cilia apical structure protein
mm39_v1_chr2_-_86314084_86314084	0.0033486962748139754	Emx1_Emx2	ENSMUST00000216534.2|Olfr228|ENSMUSG00000111772.3|olfactory receptor 228
mm39_v1_chr8_+_31579633_31579785	0.003252590322861444	Emx1_Emx2	ENSMUST00000170204.8|Dusp26|ENSMUSG00000039661.15|dual specificity phosphatase 26 (putative)
mm39_v1_chr6_-_66614736_66614736	0.0032228991467681714	Emx1_Emx2	ENSMUST00000074381.6|Vmn1r34|ENSMUSG00000091012.3|vomeronasal 1 receptor 34
mm39_v1_chr10_+_23925408_23925408	0.003144910166878692	Emx1_Emx2	ENSMUST00000071691.4|Taar7f|ENSMUSG00000100950.2|trace amine-associated receptor 7F
mm39_v1_chr7_-_103161329_103161329	0.003089930616671474	Emx1_Emx2	ENSMUST00000217627.2|Olfr610|ENSMUSG00000045584.5|olfactory receptor 610
mm39_v1_chr12_-_111946560_111946600	0.0030820065333399065	Emx1_Emx2	ENSMUST00000190680.2|Rd3l|ENSMUSG00000091402.8|retinal degeneration 3-like
mm39_v1_chrX_+_122256461_122256461	0.003058176177941399	Emx1_Emx2	ENSMUST00000238410.2|Gm2411|ENSMUSG00000118415.2|predicted gene 2411
mm39_v1_chrX_+_122925694_122925694	0.003058176177941399	Emx1_Emx2	ENSMUST00000238503.2|Gm5945|ENSMUSG00000118483.2|predicted gene 5945
mm39_v1_chr15_+_16778187_16778187	0.0029205126775980086	Emx1_Emx2	ENSMUST00000026432.8|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr18_-_38999755_38999801	0.0028402599104380235	Emx1_Emx2	ENSMUST00000115582.8|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000236060.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr13_-_21823691_21823691	0.0028001317822347765	Emx1_Emx2	ENSMUST00000043081.3|Olfr11|ENSMUSG00000036658.5|olfactory receptor 11
mm39_v1_chr2_-_85962005_85962005	0.0027874888053291873	Emx1_Emx2	ENSMUST00000099910.2|Olfr1039|ENSMUSG00000075204.4|olfactory receptor 1039
mm39_v1_chr7_-_5325456_5325456	0.002484187463354546	Emx1_Emx2	ENSMUST00000207520.2|Nlrp2|ENSMUSG00000035177.9|NLR family, pyrin domain containing 2
mm39_v1_chr2_+_68490186_68490186	0.0022214505029854643	Emx1_Emx2	ENSMUST00000055930.6|4932414N04Rik|ENSMUSG00000079324.12|RIKEN cDNA 4932414N04 gene
mm39_v1_chr2_-_89172273_89172273	0.002183395775082824	Emx1_Emx2	ENSMUST00000215469.2|Olfr1233|ENSMUSG00000075091.6|olfactory receptor 1233
mm39_v1_chr7_+_103222268_103222408	0.002157682322479266	Emx1_Emx2	ENSMUST00000216516.2|Olfr617|ENSMUSG00000073946.6|olfactory receptor 617	ENSMUST00000215755.2|Olfr617|ENSMUSG00000073946.6|olfactory receptor 617
mm39_v1_chr16_+_22737050_22737084	0.0021286364184465983	Emx1_Emx2	ENSMUST00000231768.2|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr12_+_37930305_37930340	0.0018146734655597203	Emx1_Emx2	ENSMUST00000220990.2|Dgkb|ENSMUSG00000036095.12|diacylglycerol kinase, beta
mm39_v1_chr5_+_95254797_95254797	0.0016601686077406465	Emx1_Emx2	ENSMUST00000163216.2|Pramel45|ENSMUSG00000092166.3|PRAME like 45
mm39_v1_chr4_-_102883905_102884039	0.00161823415979752	Emx1_Emx2	ENSMUST00000084382.6|Insl5|ENSMUSG00000066090.6|insulin-like 5	ENSMUST00000106869.3|Insl5|ENSMUSG00000066090.6|insulin-like 5
mm39_v1_chrX_-_28733497_28733497	0.0014514746181142847	Emx1_Emx2	ENSMUST00000178672.2|Gm10096|ENSMUSG00000095887.8|predicted gene 10096
mm39_v1_chr14_-_57371041_57371076	0.0014470042816673748	Emx1_Emx2	ENSMUST00000039380.9|Gjb6|ENSMUSG00000040055.10|gap junction protein, beta 6
mm39_v1_chrX_-_27725713_27725713	0.0014320461922155184	Emx1_Emx2	ENSMUST00000178152.2|Gm10058|ENSMUSG00000095293.8|predicted gene 10058
mm39_v1_chr2_-_85993291_85993291	0.0014106228514905908	Emx1_Emx2	ENSMUST00000099907.2|Olfr1043|ENSMUSG00000075201.3|olfactory receptor 1043
mm39_v1_chr2_+_87200239_87200239	0.001399017140139192	Emx1_Emx2	ENSMUST00000213792.2|Olfr1121|ENSMUSG00000070852.3|olfactory receptor 1121
mm39_v1_chr1_-_174749379_174749393	0.0013697644022863595	Emx1_Emx2	ENSMUST00000055294.4|Grem2|ENSMUSG00000050069.4|gremlin 2, DAN family BMP antagonist
mm39_v1_chr2_+_85551751_85551751	0.0013115914399813133	Emx1_Emx2	ENSMUST00000055517.3|Olfr1009|ENSMUSG00000043226.6|olfactory receptor 1009
mm39_v1_chr17_+_18305278_18305278	0.0011984232344595409	Emx1_Emx2	ENSMUST00000172359.3|Vmn2r91|ENSMUSG00000091206.3|vomeronasal 2, receptor 91
mm39_v1_chr1_-_173948728_173948728	0.0009894758797881697	Emx1_Emx2	ENSMUST00000214446.2|Olfr231|ENSMUSG00000046486.5|olfactory receptor 231
mm39_v1_chr9_-_36040075_36040075	0.0009830370045490935	Emx1_Emx2	ENSMUST00000168452.2|Gm5916|ENSMUSG00000091411.2|predicted gene 5916
mm39_v1_chr14_+_53574579_53574579	0.00096073728406894	Emx1_Emx2	ENSMUST00000179580.3|Trav13n-3|ENSMUSG00000096038.3|T cell receptor alpha variable 13N-3
mm39_v1_chr9_+_37683933_37683933	0.0009190694291962694	Emx1_Emx2	ENSMUST00000080634.4|Olfr875|ENSMUSG00000058628.5|olfactory receptor 875
mm39_v1_chr7_+_130936306_130936351	0.0008085427292640226	Emx1_Emx2	ENSMUST00000084505.5|Fam24a|ENSMUSG00000030859.9|family with sequence similarity 24, member A
mm39_v1_chr11_+_58311921_58311948	0.00079064357284122	Emx1_Emx2	ENSMUST00000013797.3|1810065E05Rik|ENSMUSG00000013653.3|RIKEN cDNA 1810065E05 gene
mm39_v1_chr13_-_120676749_120676749	0.0007766860517954954	Emx1_Emx2	ENSMUST00000177561.2|Gm21762|ENSMUSG00000094027.3|predicted gene, 21762
mm39_v1_chr3_+_137046935_137046951	0.0005913187172744018	Emx1_Emx2	ENSMUST00000197511.2|Emcn|ENSMUSG00000054690.18|endomucin
mm39_v1_chrX_+_30080456_30080456	0.0005882734190052251	Emx1_Emx2	ENSMUST00000177917.2|Gm14632|ENSMUSG00000073255.11|predicted gene 14632
mm39_v1_chrX_-_30540953_30540953	0.0005882734190052251	Emx1_Emx2	ENSMUST00000177566.2|Gm10487|ENSMUSG00000094759.8|predicted gene 10487
mm39_v1_chr8_+_45960855_45960864	0.0005642982706629238	Emx1_Emx2	ENSMUST00000141039.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr2_-_88175071_88175071	0.000517547894703371	Emx1_Emx2	ENSMUST00000137895.3|Olfr1177-ps|ENSMUSG00000075128.8|olfactory receptor 1177, pseudogene
mm39_v1_chr5_-_86345729_86345760	0.00038345938059082497	Emx1_Emx2	ENSMUST00000031172.9|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor	ENSMUST00000113372.2|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor
mm39_v1_chr16_-_58749755_58749755	0.000378035046016562	Emx1_Emx2	ENSMUST00000206168.2|Olfr180|ENSMUSG00000090629.3|olfactory receptor 180
mm39_v1_chr11_-_41891111_41891183	0.0002973236127398111	Emx1_Emx2	ENSMUST00000109290.2|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr4_+_118521590_118521590	0.0002957637840560076	Emx1_Emx2	ENSMUST00000217013.2|Olfr62|ENSMUSG00000043698.10|olfactory receptor 62
mm39_v1_chr15_-_5093222_5093240	0.0001460109194332423	Emx1_Emx2	ENSMUST00000110689.5|C7|ENSMUSG00000079105.5|complement component 7
mm39_v1_chr3_+_90448453_90448480	4.542827607305672e-05	Emx1_Emx2	ENSMUST00000107333.8|S100a16|ENSMUSG00000074457.11|S100 calcium binding protein A16	ENSMUST00000107331.8|S100a16|ENSMUSG00000074457.11|S100 calcium binding protein A16	ENSMUST00000098910.3|S100a16|ENSMUSG00000074457.11|S100 calcium binding protein A16
mm39_v1_chr4_-_61357980_61357980	6.746765728667178e-06	Emx1_Emx2	ENSMUST00000095049.5|Mup15|ENSMUSG00000096674.2|major urinary protein 15
