mm39_v1_chr1_+_40554513_40554596	0.012103615935134638	GAGAACU	ENSMUST00000027237.12|Il18rap|ENSMUSG00000026068.12|interleukin 18 receptor accessory protein
mm39_v1_chr17_+_24689366_24689455	0.005865576508726748	GAGAACU	ENSMUST00000053024.8|Pgp|ENSMUSG00000043445.8|phosphoglycolate phosphatase
mm39_v1_chr1_+_156386414_156386619	0.0057197104900023185	GAGAACU	ENSMUST00000166172.9|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	ENSMUST00000027888.13|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr18_+_11972277_11972331	0.005519730482632003	GAGAACU	ENSMUST00000171109.9|Cables1|ENSMUSG00000040957.16|CDK5 and Abl enzyme substrate 1	ENSMUST00000046948.10|Cables1|ENSMUSG00000040957.16|CDK5 and Abl enzyme substrate 1
mm39_v1_chr13_-_111626562_111626645	0.005487626534663779	GAGAACU	ENSMUST00000091236.11|Gpbp1|ENSMUSG00000032745.19|GC-rich promoter binding protein 1	ENSMUST00000047627.14|Gpbp1|ENSMUSG00000032745.19|GC-rich promoter binding protein 1
mm39_v1_chr3_-_61273228_61273372	0.004974522653157025	GAGAACU	ENSMUST00000066298.3|B430305J03Rik|ENSMUSG00000053706.3|RIKEN cDNA B430305J03 gene
mm39_v1_chr19_+_18690556_18690576	0.0048584435863055836	GAGAACU	ENSMUST00000062753.3|D030056L22Rik|ENSMUSG00000047044.8|RIKEN cDNA D030056L22 gene
mm39_v1_chr16_+_4457805_4457842	0.004808384879404718	GAGAACU	ENSMUST00000038770.4|Vasn|ENSMUSG00000039646.6|vasorin
mm39_v1_chr11_-_5492175_5492221	0.004669021236850126	GAGAACU	ENSMUST00000020776.5|Ccdc117|ENSMUSG00000020482.5|coiled-coil domain containing 117
mm39_v1_chr5_-_123038329_123038438	0.004494850281627763	GAGAACU	ENSMUST00000031435.14|Kdm2b|ENSMUSG00000029475.18|lysine (K)-specific demethylase 2B
mm39_v1_chr5_-_67585137_67585157	0.0043938430306630985	GAGAACU	ENSMUST00000169190.5|Bend4|ENSMUSG00000092060.5|BEN domain containing 4
mm39_v1_chr9_-_99450948_99450961	0.004253531740221683	GAGAACU	ENSMUST00000035043.12|Armc8|ENSMUSG00000032468.12|armadillo repeat containing 8
mm39_v1_chr2_-_157046386_157046461	0.004205394454645807	GAGAACU	ENSMUST00000029170.8|Rbl1|ENSMUSG00000027641.14|RB transcriptional corepressor like 1
mm39_v1_chr11_-_45835737_45835787	0.004089922208926135	GAGAACU	ENSMUST00000129820.8|Lsm11|ENSMUSG00000044847.14|U7 snRNP-specific Sm-like protein LSM11
mm39_v1_chr12_+_116244792_116244855	0.003949235718453325	GAGAACU	ENSMUST00000100986.4|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2	ENSMUST00000220816.2|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2
mm39_v1_chr11_+_86574811_86574915	0.0038495227677371865	GAGAACU	ENSMUST00000108022.8|Ptrh2|ENSMUSG00000072582.10|peptidyl-tRNA hydrolase 2	ENSMUST00000108021.2|Ptrh2|ENSMUSG00000072582.10|peptidyl-tRNA hydrolase 2
mm39_v1_chr4_-_41314877_41314889	0.0035874363445291277	GAGAACU	ENSMUST00000030145.9|Dcaf12|ENSMUSG00000028436.9|DDB1 and CUL4 associated factor 12
mm39_v1_chr8_-_120828211_120828246	0.0031459340594816444	GAGAACU	ENSMUST00000034280.9|Zdhhc7|ENSMUSG00000031823.15|zinc finger, DHHC domain containing 7
mm39_v1_chr19_-_34504871_34504880	0.0029540269342559467	GAGAACU	ENSMUST00000178114.2|Lipa|ENSMUSG00000024781.17|lysosomal acid lipase A	ENSMUST00000049572.15|Lipa|ENSMUSG00000024781.17|lysosomal acid lipase A
mm39_v1_chr4_+_126915104_126915133	0.002906811756453575	GAGAACU	ENSMUST00000030623.8|Sfpq|ENSMUSG00000028820.14|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm39_v1_chr2_-_34716083_34716099	0.0028656113104306652	GAGAACU	ENSMUST00000113077.8|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2	ENSMUST00000028220.10|Fbxw2|ENSMUSG00000035949.16|F-box and WD-40 domain protein 2
mm39_v1_chr2_+_163836880_163836880	0.002833170164234595	GAGAACU	ENSMUST00000018470.10|Ywhab|ENSMUSG00000018326.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm39_v1_chr1_+_180396478_180396525	0.0027864941246327863	GAGAACU	ENSMUST00000027777.12|Parp1|ENSMUSG00000026496.12|poly (ADP-ribose) polymerase family, member 1
mm39_v1_chr14_-_26693189_26693189	0.0027315086805374954	GAGAACU	ENSMUST00000036570.5|Appl1|ENSMUSG00000040760.12|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm39_v1_chr16_+_19578981_19578997	0.0026222579656877227	GAGAACU	ENSMUST00000079780.10|B3gnt5|ENSMUSG00000022686.15|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	ENSMUST00000164397.8|B3gnt5|ENSMUSG00000022686.15|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm39_v1_chr7_-_7302468_7302532	0.0023456702610110333	GAGAACU	ENSMUST00000000619.8|Clcn4|ENSMUSG00000000605.10|chloride channel, voltage-sensitive 4
mm39_v1_chr12_+_80837284_80837348	0.0023130396814153393	GAGAACU	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr9_+_96078340_96078406	0.0021702640861435934	GAGAACU	ENSMUST00000034982.16|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188008.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188750.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000185644.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr7_-_101552989_101552995	0.0019314808978652112	GAGAACU	ENSMUST00000106969.9|Tomt|ENSMUSG00000078630.9|transmembrane O-methyltransferase
mm39_v1_chr10_+_80591030_80591073	0.0015022116668182135	GAGAACU	ENSMUST00000105336.9|Dot1l|ENSMUSG00000061589.15|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm39_v1_chr7_-_37927399_37927440	0.0013544346489287225	GAGAACU	ENSMUST00000098513.6|Plekhf1|ENSMUSG00000074170.6|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm39_v1_chr2_+_101508747_101508815	0.0013064621328444078	GAGAACU	ENSMUST00000004949.8|Traf6|ENSMUSG00000027164.9|TNF receptor-associated factor 6
mm39_v1_chr5_+_123214332_123214418	0.0012903677688163402	GAGAACU	ENSMUST00000067505.15|Tmem120b|ENSMUSG00000054434.15|transmembrane protein 120B	ENSMUST00000111619.10|Tmem120b|ENSMUSG00000054434.15|transmembrane protein 120B	ENSMUST00000160344.2|Tmem120b|ENSMUSG00000054434.15|transmembrane protein 120B
mm39_v1_chr15_+_81686622_81686779	0.0012574917476696258	GAGAACU	ENSMUST00000109553.10|Tef|ENSMUSG00000022389.16|thyrotroph embryonic factor
mm39_v1_chr3_-_58599812_58599834	0.0012131880689310874	GAGAACU	ENSMUST00000070368.8|Siah2|ENSMUSG00000036432.9|siah E3 ubiquitin protein ligase 2
mm39_v1_chr2_+_15060051_15060222	0.00118750201785718	GAGAACU	ENSMUST00000069870.11|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000239125.2|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000193836.3|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B
mm39_v1_chr18_+_38383297_38383340	0.0010762726067796249	GAGAACU	ENSMUST00000025314.7|Dele1|ENSMUSG00000024442.7|DAP3 binding cell death enhancer 1	ENSMUST00000236078.2|Dele1|ENSMUSG00000024442.7|DAP3 binding cell death enhancer 1
mm39_v1_chr1_-_170803680_170803696	0.0009286475018682008	GAGAACU	ENSMUST00000027966.14|Fcgr2b|ENSMUSG00000026656.16|Fc receptor, IgG, low affinity IIb	ENSMUST00000081103.12|Fcgr2b|ENSMUSG00000026656.16|Fc receptor, IgG, low affinity IIb	ENSMUST00000159688.2|Fcgr2b|ENSMUSG00000026656.16|Fc receptor, IgG, low affinity IIb
mm39_v1_chr1_-_16589511_16589560	0.0008382568239395725	GAGAACU	ENSMUST00000162751.8|Stau2|ENSMUSG00000025920.20|staufen double-stranded RNA binding protein 2	ENSMUST00000027052.13|Stau2|ENSMUSG00000025920.20|staufen double-stranded RNA binding protein 2	ENSMUST00000149320.9|Stau2|ENSMUSG00000025920.20|staufen double-stranded RNA binding protein 2
mm39_v1_chr5_-_96309849_96309956	0.0005338088302069103	GAGAACU	ENSMUST00000155901.8|Cnot6l|ENSMUSG00000034724.19|CCR4-NOT transcription complex, subunit 6-like
mm39_v1_chr7_-_66038033_66038098	0.0005229613733311742	GAGAACU	ENSMUST00000015277.14|Lrrk1|ENSMUSG00000015133.18|leucine-rich repeat kinase 1
mm39_v1_chr14_+_5894220_5894254	0.0004269537720489603	GAGAACU	ENSMUST00000063750.8|Rarb|ENSMUSG00000017491.10|retinoic acid receptor, beta
mm39_v1_chr3_+_94320548_94320708	0.000305182775571844	GAGAACU	ENSMUST00000166032.8|Tdrkh|ENSMUSG00000041912.13|tudor and KH domain containing protein	ENSMUST00000200486.5|Tdrkh|ENSMUSG00000041912.13|tudor and KH domain containing protein	ENSMUST00000196386.5|Tdrkh|ENSMUSG00000041912.13|tudor and KH domain containing protein	ENSMUST00000045245.10|Tdrkh|ENSMUSG00000041912.13|tudor and KH domain containing protein	ENSMUST00000197901.5|Tdrkh|ENSMUSG00000041912.13|tudor and KH domain containing protein	ENSMUST00000198041.2|Gm42463|ENSMUSG00000106032.2|predicted gene 42463
mm39_v1_chr10_-_86334700_86334730	0.00024460590178788103	GAGAACU	ENSMUST00000120638.8|Syn3|ENSMUSG00000059602.15|synapsin III
mm39_v1_chr14_+_69266566_69266687	0.0002111253787452772	GAGAACU	ENSMUST00000014957.10|Stc1|ENSMUSG00000014813.10|stanniocalcin 1
mm39_v1_chr7_-_110682204_110682244	8.446099692814628e-05	GAGAACU	ENSMUST00000161051.8|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2	ENSMUST00000160132.8|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2	ENSMUST00000162415.9|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2
mm39_v1_chr11_+_72498029_72498133	6.964728088097426e-05	GAGAACU	ENSMUST00000021148.13|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1	ENSMUST00000138247.8|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1
mm39_v1_chr3_+_133942244_133942261	6.652618088926652e-05	GAGAACU	ENSMUST00000181904.3|Cxxc4|ENSMUSG00000044365.16|CXXC finger 4
