mm39_v1_chr10_-_37014859_37014933	0.14743309058712178	Hoxa3	ENSMUST00000092584.6|Marcks|ENSMUSG00000069662.6|myristoylated alanine rich protein kinase C substrate
mm39_v1_chr5_-_65855511_65855596	0.13355983948263733	Hoxa3	ENSMUST00000201948.4|Pds5a|ENSMUSG00000029202.13|PDS5 cohesin associated factor A
mm39_v1_chr14_+_79753055_79753148	0.11775690104890457	Hoxa3	ENSMUST00000110835.3|Elf1|ENSMUSG00000036461.17|E74-like factor 1	ENSMUST00000227192.2|Elf1|ENSMUSG00000036461.17|E74-like factor 1
mm39_v1_chr2_+_109747984_109748003	0.11441666731508411	Hoxa3	ENSMUST00000046548.14|Lgr4|ENSMUSG00000050199.14|leucine-rich repeat-containing G protein-coupled receptor 4	ENSMUST00000111037.3|Lgr4|ENSMUSG00000050199.14|leucine-rich repeat-containing G protein-coupled receptor 4
mm39_v1_chr2_+_36120438_36120557	0.1076889579112532	Hoxa3	ENSMUST00000062069.6|Ptgs1|ENSMUSG00000047250.14|prostaglandin-endoperoxide synthase 1
mm39_v1_chr5_+_115373895_115373895	0.08830179783265571	Hoxa3	ENSMUST00000081497.13|Pop5|ENSMUSG00000060152.15|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm39_v1_chr12_+_59060162_59060184	0.08405676778171572	Hoxa3	ENSMUST00000021379.8|Gemin2|ENSMUSG00000060121.16|gem nuclear organelle associated protein 2
mm39_v1_chr2_-_69542805_69542950	0.07872265687841916	Hoxa3	ENSMUST00000102706.4|Fastkd1|ENSMUSG00000027086.17|FAST kinase domains 1	ENSMUST00000073152.13|Fastkd1|ENSMUSG00000027086.17|FAST kinase domains 1
mm39_v1_chr16_-_92196954_92196971	0.06790012259051724	Hoxa3	ENSMUST00000023672.10|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1
mm39_v1_chr1_-_171854818_171854880	0.061593770873513615	Hoxa3	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr3_+_159545309_159545390	0.061201565829448565	Hoxa3	ENSMUST00000068952.10|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator	ENSMUST00000198878.2|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator
mm39_v1_chr15_+_65682066_65682083	0.06004021244728512	Hoxa3	ENSMUST00000211878.2|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A
mm39_v1_chrX_-_74460137_74460161	0.059647864061120735	Hoxa3	ENSMUST00000033542.11|Mtcp1|ENSMUSG00000031200.17|mature T cell proliferation 1
mm39_v1_chr11_-_107228382_107228463	0.055720925009430614	Hoxa3	ENSMUST00000040380.13|Pitpnc1|ENSMUSG00000040430.19|phosphatidylinositol transfer protein, cytoplasmic 1
mm39_v1_chr5_-_138185438_138185499	0.04800860568636524	Hoxa3	ENSMUST00000110937.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000139276.2|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000048698.14|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000123415.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr16_+_35861554_35861605	0.046327986883072145	Hoxa3	ENSMUST00000042203.10|Wdr5b|ENSMUSG00000034379.10|WD repeat domain 5B
mm39_v1_chr13_-_43634695_43634823	0.04345499420378708	Hoxa3	ENSMUST00000144326.4|Ranbp9|ENSMUSG00000038546.10|RAN binding protein 9
mm39_v1_chr2_+_22959452_22959467	0.03703652515091248	Hoxa3	ENSMUST00000155602.4|Acbd5|ENSMUSG00000026781.18|acyl-Coenzyme A binding domain containing 5
mm39_v1_chr2_+_22959223_22959339	0.03694203481352006	Hoxa3	ENSMUST00000114523.10|Acbd5|ENSMUSG00000026781.18|acyl-Coenzyme A binding domain containing 5
mm39_v1_chr4_-_43710231_43710255	0.032729709980938514	Hoxa3	ENSMUST00000217544.2|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71	ENSMUST00000107862.3|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71
mm39_v1_chr2_-_86109346_86109432	0.030379758037188596	Hoxa3	ENSMUST00000217294.2|Olfr1051|ENSMUSG00000075193.3|olfactory receptor 1051	ENSMUST00000217245.2|Olfr1051|ENSMUSG00000075193.3|olfactory receptor 1051	ENSMUST00000216432.2|Olfr1051|ENSMUSG00000075193.3|olfactory receptor 1051
mm39_v1_chr9_-_99302205_99302310	0.028816807842014142	Hoxa3	ENSMUST00000123771.2|Mras|ENSMUSG00000032470.18|muscle and microspikes RAS
mm39_v1_chr15_-_34356567_34356567	0.02760166311047181	Hoxa3	ENSMUST00000179647.2|9430069I07Rik|ENSMUSG00000094447.3|RIKEN cDNA 9430069I07 gene
mm39_v1_chr14_+_65612788_65612842	0.026982836636348668	Hoxa3	ENSMUST00000224687.2|Zfp395|ENSMUSG00000034522.11|zinc finger protein 395
mm39_v1_chr5_-_138185686_138185724	0.026649457264738174	Hoxa3	ENSMUST00000110936.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr14_+_26722319_26722463	0.024543358710452733	Hoxa3	ENSMUST00000035433.10|Hesx1|ENSMUSG00000040726.11|homeobox gene expressed in ES cells
mm39_v1_chr6_-_41752111_41752111	0.022355316571883693	Hoxa3	ENSMUST00000214976.3|Olfr459|ENSMUSG00000045479.8|olfactory receptor 459
mm39_v1_chr17_-_71160477_71160543	0.018363746201667037	Hoxa3	ENSMUST00000118283.8|Tgif1|ENSMUSG00000047407.18|TGFB-induced factor homeobox 1
mm39_v1_chr6_+_125529911_125529943	0.017479050444964676	Hoxa3	ENSMUST00000112254.8|Vwf|ENSMUSG00000001930.18|Von Willebrand factor	ENSMUST00000112253.6|Vwf|ENSMUSG00000001930.18|Von Willebrand factor
mm39_v1_chr6_-_129449739_129449755	0.017445470717285767	Hoxa3	ENSMUST00000112076.9|Clec7a|ENSMUSG00000079293.12|C-type lectin domain family 7, member a	ENSMUST00000184581.3|Clec7a|ENSMUSG00000079293.12|C-type lectin domain family 7, member a
mm39_v1_chr17_+_38104420_38104420	0.016047207998199843	Hoxa3	ENSMUST00000216051.3|Olfr123|ENSMUSG00000045202.7|olfactory receptor 123
mm39_v1_chr2_-_17465410_17465446	0.015394080312501198	Hoxa3	ENSMUST00000145492.2|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr17_+_38104635_38104635	0.013166710316463172	Hoxa3	ENSMUST00000214770.3|Olfr123|ENSMUSG00000045202.7|olfactory receptor 123
mm39_v1_chr2_+_110551685_110551836	0.012197320222073548	Hoxa3	ENSMUST00000111016.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr2_+_110551927_110551973	0.008895889118951773	Hoxa3	ENSMUST00000111017.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr2_-_86088672_86088672	0.00768534902399536	Hoxa3	ENSMUST00000216185.3|Olfr1049|ENSMUSG00000075194.4|olfactory receptor 1049
mm39_v1_chr2_+_89642395_89642395	0.007173837211989018	Hoxa3	ENSMUST00000214508.2|Olfr1255|ENSMUSG00000045148.6|olfactory receptor 1255
mm39_v1_chr15_-_101801351_101801356	0.005939101880669793	Hoxa3	ENSMUST00000100179.2|Krt76|ENSMUSG00000075402.2|keratin 76
mm39_v1_chr13_-_103042554_103042619	0.0055169727533564555	Hoxa3	ENSMUST00000171791.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr6_-_136758716_136758804	0.0050728589542760015	Hoxa3	ENSMUST00000078095.11|Gucy2c|ENSMUSG00000042638.15|guanylate cyclase 2c	ENSMUST00000032338.10|Gucy2c|ENSMUSG00000042638.15|guanylate cyclase 2c
mm39_v1_chr7_+_107411470_107411470	0.0047228545816441	Hoxa3	ENSMUST00000208563.3|Olfr467|ENSMUSG00000066242.4|olfactory receptor 467	ENSMUST00000214253.2|Olfr467|ENSMUSG00000066242.4|olfactory receptor 467
mm39_v1_chr5_+_108842294_108842368	0.004476506200853397	Hoxa3	ENSMUST00000013633.12|Fgfrl1|ENSMUSG00000008090.15|fibroblast growth factor receptor-like 1
mm39_v1_chr4_-_14621805_14621819	0.003797919164657415	Hoxa3	ENSMUST00000042221.14|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr5_+_90708962_90709076	0.003144193019325622	Hoxa3	ENSMUST00000094615.8|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1	ENSMUST00000200765.2|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1
mm39_v1_chr2_+_110551976_110551993	0.0030958590784269176	Hoxa3	ENSMUST00000090332.5|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr16_-_29363671_29363687	0.0026742093993726416	Hoxa3	ENSMUST00000039090.9|Atp13a4|ENSMUSG00000038094.16|ATPase type 13A4
mm39_v1_chr4_-_14621497_14621506	0.0024007685062540137	Hoxa3	ENSMUST00000149633.2|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr14_-_36820304_36820321	0.0021200127648019354	Hoxa3	ENSMUST00000022337.11|Cdhr1|ENSMUSG00000021803.11|cadherin-related family member 1
mm39_v1_chr17_+_17622934_17622970	0.001986320293951585	Hoxa3	ENSMUST00000115576.3|Lix1|ENSMUSG00000047786.13|limb and CNS expressed 1
mm39_v1_chr10_+_73782857_73782903	0.001967086137918129	Hoxa3	ENSMUST00000191709.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15	ENSMUST00000193739.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15	ENSMUST00000195531.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15
mm39_v1_chr10_-_129000620_129000620	0.001830019015582149	Hoxa3	ENSMUST00000214271.2|Olfr771|ENSMUSG00000061367.4|olfactory receptor 771
mm39_v1_chr19_-_7943365_7943401	0.0018298619766402074	Hoxa3	ENSMUST00000182102.8|Slc22a27|ENSMUSG00000067656.14|solute carrier family 22, member 27	ENSMUST00000075619.5|Slc22a27|ENSMUSG00000067656.14|solute carrier family 22, member 27
mm39_v1_chr13_-_103042294_103042318	0.0018261727880517081	Hoxa3	ENSMUST00000167462.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr13_-_21847556_21847556	0.001320178619445427	Hoxa3	ENSMUST00000214321.2|Olfr1361|ENSMUSG00000049737.3|olfactory receptor 1361
mm39_v1_chr2_+_88505972_88505982	0.0013158840574088713	Hoxa3	ENSMUST00000216767.2|Olfr1193|ENSMUSG00000060827.3|olfactory receptor 1193	ENSMUST00000213893.2|Olfr1193|ENSMUSG00000060827.3|olfactory receptor 1193
mm39_v1_chr1_-_173161069_173161088	0.0012956521483656165	Hoxa3	ENSMUST00000038227.6|Ackr1|ENSMUSG00000037872.6|atypical chemokine receptor 1 (Duffy blood group)
mm39_v1_chrX_-_142716085_142716149	0.0012689785115365083	Hoxa3	ENSMUST00000087313.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr5_-_86437119_86437167	0.0011511921316477575	Hoxa3	ENSMUST00000196462.2|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c	ENSMUST00000059424.10|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c
mm39_v1_chr3_-_72875187_72875202	0.001111552500257915	Hoxa3	ENSMUST00000167334.8|Sis|ENSMUSG00000027790.15|sucrase isomaltase (alpha-glucosidase)
mm39_v1_chr11_-_100653754_100653762	0.0009388757502911574	Hoxa3	ENSMUST00000107360.3|Hcrt|ENSMUSG00000045471.5|hypocretin	ENSMUST00000055083.4|Hcrt|ENSMUSG00000045471.5|hypocretin
mm39_v1_chr13_-_21798192_21798192	0.0007795894527759475	Hoxa3	ENSMUST00000051874.6|Olfr1362|ENSMUSG00000051258.6|olfactory receptor 1362
mm39_v1_chr6_-_30936013_30936013	0.0007061528941967751	Hoxa3	ENSMUST00000101589.5|Klf14|ENSMUSG00000073209.5|Kruppel-like factor 14
mm39_v1_chr11_-_99979052_99979096	0.0006922303705672591	Hoxa3	ENSMUST00000107419.2|Krt32|ENSMUSG00000046095.6|keratin 32
mm39_v1_chr5_-_66672158_66672180	0.0004702013565960769	Hoxa3	ENSMUST00000161879.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000159357.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2
mm39_v1_chr1_-_173018204_173018207	0.0004105934112237091	Hoxa3	ENSMUST00000215878.2|Olfr1406|ENSMUSG00000058981.5|olfactory receptor 1406	ENSMUST00000201132.3|Olfr1406|ENSMUSG00000058981.5|olfactory receptor 1406
mm39_v1_chr7_-_115637970_115637985	0.00037525676991417205	Hoxa3	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr14_-_52648384_52648384	0.0003073877577109119	Hoxa3	ENSMUST00000079459.4|Olfr1510|ENSMUSG00000063106.7|olfactory receptor 1510
mm39_v1_chr6_+_8948608_8948619	2.6353505027316573e-05	Hoxa3	ENSMUST00000160300.2|Nxph1|ENSMUSG00000046178.4|neurexophilin 1
