mm39_v1_chr7_-_3828640_3828686	0.41338991127882474	Mga	ENSMUST00000189095.7|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000094911.5|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000153846.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000108619.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000108620.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448
mm39_v1_chr13_-_22993852_22993852	0.2733072053649169	Mga	ENSMUST00000227038.2|Vmn1r209|ENSMUSG00000071491.3|vomeronasal 1 receptor 209	ENSMUST00000227265.2|Vmn1r209|ENSMUSG00000071491.3|vomeronasal 1 receptor 209
mm39_v1_chr5_-_86824205_86824227	0.2532962482483642	Mga	ENSMUST00000038448.7|Tmprss11b|ENSMUSG00000035861.7|transmembrane protease, serine 11B
mm39_v1_chr7_-_30579686_30579759	0.24932777825273955	Mga	ENSMUST00000188157.7|Cd22|ENSMUSG00000030577.15|CD22 antigen	ENSMUST00000190753.2|Cd22|ENSMUSG00000030577.15|CD22 antigen	ENSMUST00000186154.7|Cd22|ENSMUSG00000030577.15|CD22 antigen	ENSMUST00000190617.7|Cd22|ENSMUSG00000030577.15|CD22 antigen
mm39_v1_chr14_-_52516695_52516796	0.22342819458979174	Mga	ENSMUST00000167116.8|Rab2b|ENSMUSG00000022159.17|RAB2B, member RAS oncogene family	ENSMUST00000100631.11|Rab2b|ENSMUSG00000022159.17|RAB2B, member RAS oncogene family
mm39_v1_chr13_-_8921027_8921094	0.2126444918419446	Mga	ENSMUST00000177404.2|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37	ENSMUST00000176922.8|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37	ENSMUST00000021572.11|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37
mm39_v1_chr4_-_19922599_19922614	0.2073537756181315	Mga	ENSMUST00000029900.6|Atp6v0d2|ENSMUSG00000028238.7|ATPase, H+ transporting, lysosomal V0 subunit D2
mm39_v1_chr8_+_83891972_83892040	0.19750740674580927	Mga	ENSMUST00000034145.11|Tbc1d9|ENSMUSG00000031709.16|TBC1 domain family, member 9
mm39_v1_chr2_-_144369261_144369353	0.19662218687644453	Mga	ENSMUST00000163701.2|Dzank1|ENSMUSG00000037259.16|double zinc ribbon and ankyrin repeat domains 1	ENSMUST00000081982.12|Dzank1|ENSMUSG00000037259.16|double zinc ribbon and ankyrin repeat domains 1
mm39_v1_chr8_+_3443018_3443073	0.18959690751855687	Mga	ENSMUST00000004684.13|Arhgef18|ENSMUSG00000004568.14|rho/rac guanine nucleotide exchange factor (GEF) 18	ENSMUST00000145394.3|Arhgef18|ENSMUSG00000004568.14|rho/rac guanine nucleotide exchange factor (GEF) 18
mm39_v1_chr9_-_108991088_108991109	0.18292383699352555	Mga	ENSMUST00000199540.2|Fbxw21|ENSMUSG00000047237.14|F-box and WD-40 domain protein 21	ENSMUST00000198076.5|Fbxw21|ENSMUSG00000047237.14|F-box and WD-40 domain protein 21	ENSMUST00000054925.13|Fbxw21|ENSMUSG00000047237.14|F-box and WD-40 domain protein 21
mm39_v1_chr11_+_113548201_113548356	0.17969661579765567	Mga	ENSMUST00000148736.8|Cog1|ENSMUSG00000018661.18|component of oligomeric golgi complex 1	ENSMUST00000142069.8|Cog1|ENSMUSG00000018661.18|component of oligomeric golgi complex 1	ENSMUST00000134418.8|Cog1|ENSMUSG00000018661.18|component of oligomeric golgi complex 1
mm39_v1_chr2_-_88768449_88768455	0.17533608366708955	Mga	ENSMUST00000215205.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211	ENSMUST00000213412.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211
mm39_v1_chr3_+_105778174_105778229	0.16945559714205777	Mga	ENSMUST00000164730.2|Adora3|ENSMUSG00000000562.6|adenosine A3 receptor	ENSMUST00000010279.10|Tmigd3|ENSMUSG00000074344.8|transmembrane and immunoglobulin domain containing 3
mm39_v1_chr2_-_111400026_111400026	0.15634989247783038	Mga	ENSMUST00000217772.2|Olfr1295|ENSMUSG00000108919.4|olfactory receptor 1295	ENSMUST00000207283.3|Olfr1295|ENSMUSG00000108919.4|olfactory receptor 1295
mm39_v1_chr11_+_49094292_49094353	0.1562616851477867	Mga	ENSMUST00000150284.8|Zfp62|ENSMUSG00000046311.14|zinc finger protein 62	ENSMUST00000109197.8|Zfp62|ENSMUSG00000046311.14|zinc finger protein 62	ENSMUST00000151228.2|Zfp62|ENSMUSG00000046311.14|zinc finger protein 62
mm39_v1_chr11_-_58437248_58437248	0.15459628125903693	Mga	ENSMUST00000219448.2|Olfr329|ENSMUSG00000064252.10|olfactory receptor 329
mm39_v1_chr9_+_38407097_38407106	0.15222069133544114	Mga	ENSMUST00000214003.3|Olfr907|ENSMUSG00000094810.4|olfactory receptor 907	ENSMUST00000214264.3|Olfr907|ENSMUSG00000094810.4|olfactory receptor 907
mm39_v1_chr12_-_114252202_114252263	0.14091778298424865	Mga	ENSMUST00000195124.6|Ighv3-6|ENSMUSG00000076672.8|immunoglobulin heavy variable 3-6	ENSMUST00000103481.3|Ighv3-6|ENSMUSG00000076672.8|immunoglobulin heavy variable 3-6
mm39_v1_chr4_+_132291369_132291389	0.13306080150726657	Mga	ENSMUST00000070690.8|Ptafr|ENSMUSG00000056529.8|platelet-activating factor receptor
mm39_v1_chr10_+_79505203_79505293	0.12658668550865915	Mga	ENSMUST00000020552.8|Tpgs1|ENSMUSG00000020308.8|tubulin polyglutamylase complex subunit 1	ENSMUST00000239401.2|Tpgs1|ENSMUSG00000020308.8|tubulin polyglutamylase complex subunit 1
mm39_v1_chr17_+_21031817_21031880	0.12302704926601084	Mga	ENSMUST00000232810.2|Vmn1r229|ENSMUSG00000117148.2|vomeronasal 1 receptor 229	ENSMUST00000233712.2|Vmn1r229|ENSMUSG00000117148.2|vomeronasal 1 receptor 229	ENSMUST00000232852.2|Vmn1r229|ENSMUSG00000117148.2|vomeronasal 1 receptor 229
mm39_v1_chr7_-_10292412_10292412	0.12151334906629489	Mga	ENSMUST00000236246.2|Vmn1r68|ENSMUSG00000047031.6|vomeronasal 1 receptor 68
mm39_v1_chr11_+_49094119_49094172	0.11505594064922145	Mga	ENSMUST00000109198.8|Zfp62|ENSMUSG00000046311.14|zinc finger protein 62	ENSMUST00000137061.9|Zfp62|ENSMUSG00000046311.14|zinc finger protein 62
mm39_v1_chr13_-_8921000_8921015	0.10874166272720921	Mga	ENSMUST00000164183.9|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37
mm39_v1_chr15_-_66673425_66673448	0.09828995723102166	Mga	ENSMUST00000168589.8|Sla|ENSMUSG00000022372.15|src-like adaptor
mm39_v1_chr5_+_108777636_108777751	0.07829906634440498	Mga	ENSMUST00000146207.6|Tmem175|ENSMUSG00000013495.16|transmembrane protein 175	ENSMUST00000063272.13|Tmem175|ENSMUSG00000013495.16|transmembrane protein 175
mm39_v1_chr11_+_46462363_46462363	0.07090274500435198	Mga	ENSMUST00000050937.7|BC053393|ENSMUSG00000046974.7|cDNA sequence BC053393
mm39_v1_chr4_+_43381979_43382084	0.07019773182142877	Mga	ENSMUST00000035645.12|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2	ENSMUST00000144911.8|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2
mm39_v1_chr16_-_62607105_62607161	0.06936529439319268	Mga	ENSMUST00000152553.2|Nsun3|ENSMUSG00000050312.13|NOL1/NOP2/Sun domain family member 3	ENSMUST00000063089.12|Nsun3|ENSMUSG00000050312.13|NOL1/NOP2/Sun domain family member 3
mm39_v1_chr10_+_75047897_75047981	0.06577436287361285	Mga	ENSMUST00000218766.2|Specc1l|ENSMUSG00000033444.15|sperm antigen with calponin homology and coiled-coil domains 1-like
mm39_v1_chr1_-_74627123_74627200	0.059896057229823454	Mga	ENSMUST00000027315.14|Zfp142|ENSMUSG00000026135.18|zinc finger protein 142	ENSMUST00000113737.8|Zfp142|ENSMUSG00000026135.18|zinc finger protein 142
mm39_v1_chr8_-_106706035_106706083	0.05799228645517728	Mga	ENSMUST00000034371.9|Dpep3|ENSMUSG00000031898.10|dipeptidase 3
mm39_v1_chr6_+_68414401_68414437	0.057113783322611016	Mga	ENSMUST00000103324.3|Igkv15-103|ENSMUSG00000076523.3|immunoglobulin kappa chain variable 15-103
mm39_v1_chr1_-_130390418_130390508	0.05674762537267617	Mga	ENSMUST00000027650.13|Cd55|ENSMUSG00000026399.13|CD55 molecule, decay accelerating factor for complement
mm39_v1_chrX_+_20483742_20484029	0.05131038231659318	Mga	ENSMUST00000115375.8|Rbm10|ENSMUSG00000031060.17|RNA binding motif protein 10	ENSMUST00000115374.8|Rbm10|ENSMUSG00000031060.17|RNA binding motif protein 10	ENSMUST00000084383.10|Rbm10|ENSMUSG00000031060.17|RNA binding motif protein 10
mm39_v1_chr17_-_32569480_32569582	0.04972230122681582	Mga	ENSMUST00000235265.2|Akap8l|ENSMUSG00000002625.11|A kinase (PRKA) anchor protein 8-like	ENSMUST00000236503.2|Akap8l|ENSMUSG00000002625.11|A kinase (PRKA) anchor protein 8-like	ENSMUST00000050214.9|Akap8l|ENSMUSG00000002625.11|A kinase (PRKA) anchor protein 8-like
mm39_v1_chr8_+_123338357_123338403	0.04850069083562173	Mga	ENSMUST00000015157.10|Trappc2l|ENSMUSG00000015013.10|trafficking protein particle complex 2-like
mm39_v1_chr19_+_13628455_13628455	0.04251860363437913	Mga	ENSMUST00000213900.2|Olfr1490|ENSMUSG00000061387.4|olfactory receptor 1490
mm39_v1_chr1_+_60448813_60448913	0.03951897091958611	Mga	ENSMUST00000188594.7|Abi2|ENSMUSG00000026782.16|abl interactor 2	ENSMUST00000188618.7|Abi2|ENSMUSG00000026782.16|abl interactor 2	ENSMUST00000189980.7|Abi2|ENSMUSG00000026782.16|abl interactor 2
mm39_v1_chr3_+_87283687_87283701	0.03815149268136643	Mga	ENSMUST00000163661.8|Fcrl1|ENSMUSG00000059994.11|Fc receptor-like 1	ENSMUST00000072480.9|Fcrl1|ENSMUSG00000059994.11|Fc receptor-like 1
mm39_v1_chr2_+_144369638_144369695	0.03630022113709207	Mga	ENSMUST00000028914.9|Polr3f|ENSMUSG00000027427.14|polymerase (RNA) III (DNA directed) polypeptide F	ENSMUST00000110017.3|Polr3f|ENSMUSG00000027427.14|polymerase (RNA) III (DNA directed) polypeptide F
mm39_v1_chr6_-_148797648_148797735	0.035470600931603306	Mga	ENSMUST00000072324.12|Caprin2|ENSMUSG00000030309.17|caprin family member 2	ENSMUST00000111569.9|Caprin2|ENSMUSG00000030309.17|caprin family member 2
mm39_v1_chr1_+_60448703_60448811	0.03449198820819188	Mga	ENSMUST00000052332.15|Abi2|ENSMUSG00000026782.16|abl interactor 2
mm39_v1_chr1_-_74627264_74627308	0.0342065477637641	Mga	ENSMUST00000066986.13|Zfp142|ENSMUSG00000026135.18|zinc finger protein 142
mm39_v1_chr17_-_8046125_8046141	0.03139701358092226	Mga	ENSMUST00000239425.2|Fndc1|ENSMUSG00000071984.12|fibronectin type III domain containing 1	ENSMUST00000167580.8|Fndc1|ENSMUSG00000071984.12|fibronectin type III domain containing 1
mm39_v1_chr16_-_35951553_35951611	0.030938290577395146	Mga	ENSMUST00000161638.2|Csta1|ENSMUSG00000034362.8|cystatin A1	ENSMUST00000096090.3|Csta1|ENSMUSG00000034362.8|cystatin A1
mm39_v1_chr9_-_96993169_96993214	0.030712714443936168	Mga	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr6_-_69835868_69835916	0.029989229131739313	Mga	ENSMUST00000103369.2|Igkv12-41|ENSMUSG00000095007.2|immunoglobulin kappa chain variable 12-41
mm39_v1_chr3_+_87283748_87283766	0.029293879696038378	Mga	ENSMUST00000167200.7|Fcrl1|ENSMUSG00000059994.11|Fc receptor-like 1
mm39_v1_chr3_-_146227144_146227192	0.02474514086597611	Mga	ENSMUST00000199079.2|Rpf1|ENSMUSG00000028187.11|ribosome production factor 1 homolog	ENSMUST00000029838.11|Rpf1|ENSMUSG00000028187.11|ribosome production factor 1 homolog
mm39_v1_chr17_+_36172210_36172232	0.022811580730381812	Mga	ENSMUST00000074259.15|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)	ENSMUST00000174873.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr15_+_51740825_51740903	0.02271074894528101	Mga	ENSMUST00000137116.3|Utp23|ENSMUSG00000022313.11|UTP23 small subunit processome component	ENSMUST00000161651.2|Utp23|ENSMUSG00000022313.11|UTP23 small subunit processome component	ENSMUST00000059599.10|Utp23|ENSMUSG00000022313.11|UTP23 small subunit processome component
mm39_v1_chr3_+_87283767_87283774	0.018055634138314108	Mga	ENSMUST00000194786.6|Fcrl1|ENSMUSG00000059994.11|Fc receptor-like 1	ENSMUST00000191666.2|Fcrl1|ENSMUSG00000059994.11|Fc receptor-like 1
mm39_v1_chr9_+_98738547_98738547	0.01796126405163201	Mga	ENSMUST00000071302.3|Prr23a2|ENSMUSG00000063058.3|proline rich 23A, member 2
mm39_v1_chr16_-_9812787_9812876	0.017814534645552247	Mga	ENSMUST00000199708.5|Grin2a|ENSMUSG00000059003.13|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm39_v1_chr16_+_90182895_90182910	0.013029456491780429	Mga	ENSMUST00000065856.8|Hunk|ENSMUSG00000053414.9|hormonally upregulated Neu-associated kinase
mm39_v1_chrY_-_70312506_70312506	0.010790970132892728	Mga	ENSMUST00000185989.2|Gm29423|ENSMUSG00000101725.7|predicted gene 29423
mm39_v1_chrX_+_35152460_35152515	0.010623837376729913	Mga	ENSMUST00000033419.13|Dock11|ENSMUSG00000031093.15|dedicator of cytokinesis 11
mm39_v1_chr3_-_94343874_94343944	0.00915422838948731	Mga	ENSMUST00000204913.3|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3	ENSMUST00000191506.8|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3	ENSMUST00000199678.4|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3
mm39_v1_chr19_-_13807805_13807845	0.0068597953473600775	Mga	ENSMUST00000214475.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000067670.5|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000219674.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000216287.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500	ENSMUST00000215760.2|Olfr1500|ENSMUSG00000054526.6|olfactory receptor 1500
mm39_v1_chr1_+_75412574_75412636	0.005044999579373027	Mga	ENSMUST00000037796.14|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000113584.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000145166.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000143730.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000133418.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000144874.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A	ENSMUST00000140287.8|Gmppa|ENSMUSG00000033021.17|GDP-mannose pyrophosphorylase A
mm39_v1_chr19_+_46064302_46064387	0.004945778016000085	Mga	ENSMUST00000165017.2|Nolc1|ENSMUSG00000015176.12|nucleolar and coiled-body phosphoprotein 1	ENSMUST00000223741.2|Nolc1|ENSMUSG00000015176.12|nucleolar and coiled-body phosphoprotein 1	ENSMUST00000225780.2|Nolc1|ENSMUSG00000015176.12|nucleolar and coiled-body phosphoprotein 1
mm39_v1_chr8_+_46387647_46387664	0.004729573756572899	Mga	ENSMUST00000095326.10|Ccdc110|ENSMUSG00000071104.11|coiled-coil domain containing 110
mm39_v1_chr7_+_55889488_55889530	0.004431716605058032	Mga	ENSMUST00000032633.12|Oca2|ENSMUSG00000030450.12|oculocutaneous albinism II	ENSMUST00000155533.2|Oca2|ENSMUSG00000030450.12|oculocutaneous albinism II	ENSMUST00000156886.8|Oca2|ENSMUSG00000030450.12|oculocutaneous albinism II
mm39_v1_chr11_+_116422712_116422737	0.003976070470650861	Mga	ENSMUST00000100201.10|Sphk1|ENSMUSG00000061878.17|sphingosine kinase 1
mm39_v1_chr11_+_21522221_21522235	0.003534509755417901	Mga	ENSMUST00000131135.3|Wdpcp|ENSMUSG00000020319.10|WD repeat containing planar cell polarity effector	ENSMUST00000020568.10|Wdpcp|ENSMUSG00000020319.10|WD repeat containing planar cell polarity effector
mm39_v1_chrY_-_6681243_6681243	0.0033266347269732856	Mga	ENSMUST00000115940.2|Gm21719|ENSMUSG00000079806.3|predicted gene, 21719
mm39_v1_chr11_-_58425662_58425662	0.0032183236217890694	Mga	ENSMUST00000213188.3|Olfr330|ENSMUSG00000050818.8|olfactory receptor 330
mm39_v1_chr8_-_14025032_14025074	0.0029123709187697322	Mga	ENSMUST00000145695.2|Tdrp|ENSMUSG00000050052.13|testis development related protein
mm39_v1_chr8_-_14024715_14024777	0.0025708446898964486	Mga	ENSMUST00000062613.12|Tdrp|ENSMUSG00000050052.13|testis development related protein
mm39_v1_chr1_-_130350746_130350801	0.002553727034074007	Mga	ENSMUST00000112488.9|Cd55b|ENSMUSG00000026401.16|CD55 molecule, decay accelerating factor for complement B	ENSMUST00000119432.2|Cd55b|ENSMUSG00000026401.16|CD55 molecule, decay accelerating factor for complement B
mm39_v1_chr14_-_60414932_60415008	0.00219226391194665	Mga	ENSMUST00000140924.3|Atp8a2|ENSMUSG00000021983.17|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm39_v1_chr11_-_103109247_103109264	0.002061452054161489	Mga	ENSMUST00000103076.2|Spata32|ENSMUSG00000044787.8|spermatogenesis associated 32
mm39_v1_chr12_-_54742597_54742682	0.0020102247662955493	Mga	ENSMUST00000110713.10|Eapp|ENSMUSG00000054302.16|E2F-associated phosphoprotein	ENSMUST00000162106.8|Eapp|ENSMUSG00000054302.16|E2F-associated phosphoprotein	ENSMUST00000160085.2|Eapp|ENSMUSG00000054302.16|E2F-associated phosphoprotein	ENSMUST00000161592.8|Eapp|ENSMUSG00000054302.16|E2F-associated phosphoprotein	ENSMUST00000163433.8|Eapp|ENSMUSG00000054302.16|E2F-associated phosphoprotein	ENSMUST00000067272.9|Eapp|ENSMUSG00000054302.16|E2F-associated phosphoprotein
mm39_v1_chr5_+_37332834_37332852	0.0017322299096611152	Mga	ENSMUST00000208827.2|Gm1043|ENSMUSG00000117286.2|predicted gene 1043	ENSMUST00000207619.2|Gm1043|ENSMUSG00000117286.2|predicted gene 1043
mm39_v1_chrX_-_20483845_20483858	0.0016971371126209714	Mga	ENSMUST00000116621.2|Ndufb11|ENSMUSG00000031059.10|NADH:ubiquinone oxidoreductase subunit B11
mm39_v1_chr2_+_107120934_107121005	0.0013472222969761584	Mga	ENSMUST00000037012.3|Kcna4|ENSMUSG00000042604.6|potassium voltage-gated channel, shaker-related subfamily, member 4
mm39_v1_chr3_+_137923521_137923538	0.0013262050181240832	Mga	ENSMUST00000090171.7|Adh7|ENSMUSG00000055301.9|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm39_v1_chr9_+_38737841_38737841	0.0011056921439503186	Mga	ENSMUST00000213619.2|Olfr923|ENSMUSG00000044798.8|olfactory receptor 923
mm39_v1_chr6_+_129374260_129374296	0.0009836490001432104	Mga	ENSMUST00000032262.14|Clec1b|ENSMUSG00000030159.16|C-type lectin domain family 1, member b
mm39_v1_chrY_+_5944438_5944438	0.0003279384287497717	Mga	ENSMUST00000178779.2|Gm21778|ENSMUSG00000096036.3|predicted gene, 21778
mm39_v1_chr14_-_56137697_56137717	8.107656095795274e-05	Mga	ENSMUST00000111325.5|Sdr39u1|ENSMUSG00000022223.10|short chain dehydrogenase/reductase family 39U, member 1
