mm39_v1_chrX_+_16485937_16486057	0.6517193795317694	Msx3	ENSMUST00000026013.6|Maoa|ENSMUSG00000025037.7|monoamine oxidase A
mm39_v1_chr19_+_13208692_13208692	0.4712151905811763	Msx3	ENSMUST00000207246.4|Olfr1463|ENSMUSG00000096365.5|olfactory receptor 1463
mm39_v1_chrX_-_48980360_48980360	0.37588228190030754	Msx3	ENSMUST00000217355.3|Olfr1322|ENSMUSG00000056281.5|olfactory receptor 1322
mm39_v1_chr7_+_140181182_140181253	0.3586723175219663	Msx3	ENSMUST00000214180.2|Olfr46|ENSMUSG00000093942.4|olfactory receptor 46	ENSMUST00000211771.2|Olfr46|ENSMUSG00000093942.4|olfactory receptor 46
mm39_v1_chr3_-_129834788_129834855	0.34221561965214947	Msx3	ENSMUST00000168644.3|Sec24b|ENSMUSG00000001052.16|Sec24 related gene family, member B (S. cerevisiae)
mm39_v1_chr7_+_3648264_3648351	0.33326773936350484	Msx3	ENSMUST00000206287.2|Cnot3|ENSMUSG00000035632.17|CCR4-NOT transcription complex, subunit 3	ENSMUST00000038913.16|Cnot3|ENSMUSG00000035632.17|CCR4-NOT transcription complex, subunit 3
mm39_v1_chr2_-_111820618_111820626	0.3181532048322104	Msx3	ENSMUST00000216948.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309	ENSMUST00000214935.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309	ENSMUST00000217452.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309	ENSMUST00000215045.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309
mm39_v1_chr13_+_23191826_23191826	0.2940161362902477	Msx3	ENSMUST00000228758.2|Vmn1r213|ENSMUSG00000060024.3|vomeronasal 1 receptor 213	ENSMUST00000228031.2|Vmn1r213|ENSMUSG00000060024.3|vomeronasal 1 receptor 213	ENSMUST00000227573.2|Vmn1r213|ENSMUSG00000060024.3|vomeronasal 1 receptor 213
mm39_v1_chr2_-_111843053_111843053	0.2926543247172931	Msx3	ENSMUST00000213559.3|Olfr1310|ENSMUSG00000108827.4|olfactory receptor 1310
mm39_v1_chr7_-_107633196_107633196	0.2828272183535833	Msx3	ENSMUST00000210173.3|Olfr478|ENSMUSG00000094426.4|olfactory receptor 478
mm39_v1_chr17_-_37523969_37524009	0.26678467204387646	Msx3	ENSMUST00000060728.7|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95	ENSMUST00000216318.2|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95
mm39_v1_chr10_-_75946790_75946796	0.23845051016215224	Msx3	ENSMUST00000120757.2|Slc5a4b|ENSMUSG00000020226.10|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm39_v1_chr2_+_96148418_96148561	0.2027950069069626	Msx3	ENSMUST00000135431.8|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C	ENSMUST00000162807.9|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C
mm39_v1_chr13_+_22508759_22508759	0.19991206625542612	Msx3	ENSMUST00000226225.2|Vmn1r197|ENSMUSG00000069294.3|vomeronasal 1 receptor 197	ENSMUST00000227017.2|Vmn1r197|ENSMUSG00000069294.3|vomeronasal 1 receptor 197
mm39_v1_chr13_+_23398297_23398297	0.19091245818714142	Msx3	ENSMUST00000236177.2|Vmn1r221|ENSMUSG00000082316.5|vomeronasal 1 receptor 221
mm39_v1_chr2_+_87696836_87696836	0.17746854761704223	Msx3	ENSMUST00000213308.3|Olfr1152|ENSMUSG00000045225.5|olfactory receptor 1152
mm39_v1_chr11_-_73382303_73382429	0.17477729201179867	Msx3	ENSMUST00000119863.2|Olfr381|ENSMUSG00000072708.4|olfactory receptor 381	ENSMUST00000215358.2|Olfr381|ENSMUSG00000072708.4|olfactory receptor 381	ENSMUST00000214623.2|Olfr381|ENSMUSG00000072708.4|olfactory receptor 381
mm39_v1_chr16_+_11224481_11224539	0.16477754206919304	Msx3	ENSMUST00000122168.8|Snx29|ENSMUSG00000071669.15|sorting nexin 29
mm39_v1_chr3_+_94745009_94745034	0.1501465118415936	Msx3	ENSMUST00000107266.8|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain	ENSMUST00000042402.12|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain	ENSMUST00000107269.2|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain
mm39_v1_chr2_-_45007407_45007421	0.1420553053921894	Msx3	ENSMUST00000176438.9|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr2_-_32976378_32976452	0.13756163694628715	Msx3	ENSMUST00000049618.9|Garnl3|ENSMUSG00000038860.16|GTPase activating RANGAP domain-like 3
mm39_v1_chr3_+_66892979_66893026	0.1359381647418004	Msx3	ENSMUST00000162362.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065074.14|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065047.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr9_+_38516398_38516398	0.13075001952528448	Msx3	ENSMUST00000217057.2|Olfr914|ENSMUSG00000047050.3|olfactory receptor 914
mm39_v1_chr17_+_30940015_30940015	0.11772831334330366	Msx3	ENSMUST00000236948.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr5_+_104350475_104350490	0.11460806233697493	Msx3	ENSMUST00000066708.7|Dmp1|ENSMUSG00000029307.8|dentin matrix protein 1
mm39_v1_chr7_-_12829100_12829100	0.11421277480449497	Msx3	ENSMUST00000209822.3|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85	ENSMUST00000235753.2|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85
mm39_v1_chrX_-_142716200_142716307	0.10733736216397868	Msx3	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr11_-_99134885_99134964	0.10108584925481716	Msx3	ENSMUST00000103132.10|Krt222|ENSMUSG00000035849.15|keratin 222	ENSMUST00000038214.7|Krt222|ENSMUSG00000035849.15|keratin 222
mm39_v1_chr6_+_68279392_68279411	0.09850776627920249	Msx3	ENSMUST00000103322.3|Igkv2-109|ENSMUSG00000105606.2|immunoglobulin kappa variable 2-109
mm39_v1_chr3_+_94744844_94744884	0.09807276725104953	Msx3	ENSMUST00000107270.9|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain
mm39_v1_chr1_+_104696235_104696254	0.0967216598759694	Msx3	ENSMUST00000062528.9|Cdh20|ENSMUSG00000050840.9|cadherin 20
mm39_v1_chr10_+_85763545_85763545	0.094459126839832	Msx3	ENSMUST00000170396.3|Ascl4|ENSMUSG00000085111.4|achaete-scute family bHLH transcription factor 4
mm39_v1_chr2_-_32977182_32977265	0.09415099216962527	Msx3	ENSMUST00000102810.10|Garnl3|ENSMUSG00000038860.16|GTPase activating RANGAP domain-like 3
mm39_v1_chr2_+_88348895_88348899	0.08776900525552059	Msx3	ENSMUST00000216978.2|Olfr1186|ENSMUSG00000082882.3|olfactory receptor 1186	ENSMUST00000215912.2|Olfr1186|ENSMUSG00000082882.3|olfactory receptor 1186
mm39_v1_chr13_+_22268610_22268610	0.08727256472184763	Msx3	ENSMUST00000228243.2|Vmn1r188|ENSMUSG00000069299.3|vomeronasal 1 receptor 188	ENSMUST00000226680.2|Vmn1r188|ENSMUSG00000069299.3|vomeronasal 1 receptor 188
mm39_v1_chr5_+_88731386_88731449	0.08634749641072469	Msx3	ENSMUST00000031229.11|Rufy3|ENSMUSG00000029291.12|RUN and FYVE domain containing 3
mm39_v1_chr14_+_60615128_60615153	0.08434117516258843	Msx3	ENSMUST00000022561.9|Amer2|ENSMUSG00000021986.10|APC membrane recruitment 2
mm39_v1_chr3_-_97329336_97329336	0.08326710776527507	Msx3	ENSMUST00000199297.4|Olfr1402|ENSMUSG00000051392.6|olfactory receptor 1402
mm39_v1_chr5_+_14564932_14565007	0.08030927030382241	Msx3	ENSMUST00000182407.8|Pclo|ENSMUSG00000061601.16|piccolo (presynaptic cytomatrix protein)	ENSMUST00000030691.17|Pclo|ENSMUSG00000061601.16|piccolo (presynaptic cytomatrix protein)
mm39_v1_chr18_+_4993795_4993818	0.07674824576176958	Msx3	ENSMUST00000153016.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr12_+_102094977_102094997	0.07465486326044762	Msx3	ENSMUST00000159329.8|Slc24a4|ENSMUSG00000041771.15|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm39_v1_chr8_+_72973560_72973636	0.07243253030992676	Msx3	ENSMUST00000003123.10|Fam32a|ENSMUSG00000003039.10|family with sequence similarity 32, member A
mm39_v1_chr2_-_89671899_89671899	0.0698585508767763	Msx3	ENSMUST00000213833.2|Olfr1256|ENSMUSG00000075073.4|olfactory receptor 1256
mm39_v1_chr10_+_39488930_39488930	0.06792225738982056	Msx3	ENSMUST00000019987.7|Traf3ip2|ENSMUSG00000019842.7|TRAF3 interacting protein 2
mm39_v1_chr10_+_88214989_88215031	0.06509574225671332	Msx3	ENSMUST00000127615.8|Gnptab|ENSMUSG00000035311.17|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm39_v1_chr3_+_41697046_41697160	0.06462364025300495	Msx3	ENSMUST00000120167.8|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed	ENSMUST00000108065.9|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed	ENSMUST00000146165.8|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed	ENSMUST00000192193.6|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed	ENSMUST00000119572.8|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed	ENSMUST00000026867.14|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed	ENSMUST00000026868.13|D3Ertd751e|ENSMUSG00000025766.15|DNA segment, Chr 3, ERATO Doi 751, expressed
mm39_v1_chrX_+_106299484_106299671	0.061356839293914896	Msx3	ENSMUST00000101294.9|Gpr174|ENSMUSG00000073008.12|G protein-coupled receptor 174	ENSMUST00000118820.8|Gpr174|ENSMUSG00000073008.12|G protein-coupled receptor 174	ENSMUST00000120971.8|Gpr174|ENSMUSG00000073008.12|G protein-coupled receptor 174
mm39_v1_chr12_-_114443071_114443116	0.060615196833018824	Msx3	ENSMUST00000103492.2|Ighv10-1|ENSMUSG00000095981.2|immunoglobulin heavy variable 10-1
mm39_v1_chr10_+_88215079_88215164	0.059964595959971105	Msx3	ENSMUST00000130301.8|Gnptab|ENSMUSG00000035311.17|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	ENSMUST00000020251.10|Gnptab|ENSMUSG00000035311.17|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm39_v1_chr4_-_43710231_43710255	0.057571021587693325	Msx3	ENSMUST00000217544.2|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71	ENSMUST00000107862.3|Olfr71|ENSMUSG00000046450.4|olfactory receptor 71
mm39_v1_chr4_+_134658209_134658221	0.050532243968559404	Msx3	ENSMUST00000030622.3|Syf2|ENSMUSG00000028821.9|SYF2 homolog, RNA splicing factor (S. cerevisiae)
mm39_v1_chrX_+_100492684_100492697	0.048641487235506604	Msx3	ENSMUST00000033674.6|Itgb1bp2|ENSMUSG00000031312.6|integrin beta 1 binding protein 2
mm39_v1_chr7_+_84562283_84562297	0.04428909189803624	Msx3	ENSMUST00000216367.2|Olfr290|ENSMUSG00000070459.7|olfactory receptor 290	ENSMUST00000214501.3|Olfr290|ENSMUSG00000070459.7|olfactory receptor 290
mm39_v1_chr17_-_24746804_24746858	0.040312790865932625	Msx3	ENSMUST00000176353.8|Traf7|ENSMUSG00000052752.16|TNF receptor-associated factor 7	ENSMUST00000176237.8|Traf7|ENSMUSG00000052752.16|TNF receptor-associated factor 7
mm39_v1_chr19_+_12257218_12257303	0.038249402866890346	Msx3	ENSMUST00000207186.4|Olfr1434|ENSMUSG00000095640.5|olfactory receptor 1434	ENSMUST00000207915.2|Olfr1434|ENSMUSG00000095640.5|olfactory receptor 1434
mm39_v1_chr17_-_24746911_24746924	0.038068856427550625	Msx3	ENSMUST00000176652.8|Traf7|ENSMUSG00000052752.16|TNF receptor-associated factor 7
mm39_v1_chr14_+_122272069_122272086	0.03390994193541587	Msx3	ENSMUST00000045976.7|Timm8a2|ENSMUSG00000071229.4|translocase of inner mitochondrial membrane 8A2
mm39_v1_chr1_-_97055931_97055982	0.032400751470064056	Msx3	ENSMUST00000027569.14|Slco6c1|ENSMUSG00000026331.14|solute carrier organic anion transporter family, member 6c1
mm39_v1_chr3_-_41696906_41696984	0.0310207246232688	Msx3	ENSMUST00000026866.15|Sclt1|ENSMUSG00000059834.13|sodium channel and clathrin linker 1
mm39_v1_chr11_+_6366259_6366319	0.026308770301419995	Msx3	ENSMUST00000213200.2|Ppia|ENSMUSG00000071866.13|peptidylprolyl isomerase A
mm39_v1_chr15_+_82136598_82136676	0.022108373827802168	Msx3	ENSMUST00000136948.3|1500009C09Rik|ENSMUSG00000068099.6|RIKEN cDNA 1500009C09 gene
mm39_v1_chr2_+_121787131_121787145	0.02141705991557202	Msx3	ENSMUST00000110574.8|Ctdspl2|ENSMUSG00000033411.17|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm39_v1_chr13_-_23041731_23041731	0.018608854169939303	Msx3	ENSMUST00000228645.2|Vmn1r211|ENSMUSG00000063998.5|vomeronasal 1 receptor 211
mm39_v1_chr4_-_43840201_43840201	0.01794814269898365	Msx3	ENSMUST00000214281.2|Olfr157|ENSMUSG00000111611.2|olfactory receptor 157
mm39_v1_chr9_+_100479732_100479851	0.016727071397138284	Msx3	ENSMUST00000124487.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr17_+_49922129_49922200	0.00567119346857126	Msx3	ENSMUST00000162854.2|Kif6|ENSMUSG00000023999.15|kinesin family member 6
mm39_v1_chr13_+_22563988_22563988	0.0048530801918945	Msx3	ENSMUST00000227685.2|Vmn1r199|ENSMUSG00000069292.5|vomeronasal 1 receptor 199	ENSMUST00000227689.2|Vmn1r199|ENSMUSG00000069292.5|vomeronasal 1 receptor 199	ENSMUST00000227846.2|Vmn1r199|ENSMUSG00000069292.5|vomeronasal 1 receptor 199
mm39_v1_chr4_+_102112189_102112200	0.004369357996208415	Msx3	ENSMUST00000106908.9|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr7_-_98790275_98790356	0.0028723552502566982	Msx3	ENSMUST00000037968.10|Uvrag|ENSMUSG00000035354.10|UV radiation resistance associated gene
mm39_v1_chr12_-_113649535_113649665	0.0026319213097122083	Msx3	ENSMUST00000103449.4|Ighv2-5|ENSMUSG00000096498.4|immunoglobulin heavy variable 2-5	ENSMUST00000195707.3|Ighv2-5|ENSMUSG00000096498.4|immunoglobulin heavy variable 2-5
mm39_v1_chr9_+_72714156_72714156	0.0010260319508822522	Msx3	ENSMUST00000055535.9|Prtg|ENSMUSG00000036030.10|protogenin
mm39_v1_chrM_+_9870_9885	0.0005367066921653277	Msx3	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.1|mitochondrially encoded NADH dehydrogenase 4L
mm39_v1_chr9_+_96140781_96140838	0.0004282488277866784	Msx3	ENSMUST00000190104.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000179416.8|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000189606.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr6_+_48604157_48604215	0.00018991696967446306	Msx3	ENSMUST00000203088.3|AI854703|ENSMUSG00000053297.15|expressed sequence AI854703	ENSMUST00000204958.2|AI854703|ENSMUSG00000053297.15|expressed sequence AI854703
mm39_v1_chr5_-_140986312_140986406	0.00017708538909160247	Msx3	ENSMUST00000085786.7|Card11|ENSMUSG00000036526.9|caspase recruitment domain family, member 11
