mm39_v1_chr1_-_120432669_120432753	0.2343023234060322	Rorc_Nr1d1	ENSMUST00000027639.8|Marco|ENSMUSG00000026390.8|macrophage receptor with collagenous structure
mm39_v1_chr3_-_10273628_10273646	0.22629034273386928	Rorc_Nr1d1	ENSMUST00000029041.6|Fabp4|ENSMUSG00000062515.4|fatty acid binding protein 4, adipocyte
mm39_v1_chr17_+_34124078_34124109	0.20263216702063813	Rorc_Nr1d1	ENSMUST00000172817.2|Smim40|ENSMUSG00000092349.2|small integral membrane protein 40
mm39_v1_chr16_-_18904240_18904256	0.1766606651316632	Rorc_Nr1d1	ENSMUST00000103746.3|Iglv1|ENSMUSG00000076934.3|immunoglobulin lambda variable 1
mm39_v1_chr3_-_89671888_89671953	0.1539332753036021	Rorc_Nr1d1	ENSMUST00000200558.5|Chrnb2|ENSMUSG00000027950.8|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	ENSMUST00000029562.5|Chrnb2|ENSMUSG00000027950.8|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm39_v1_chr17_-_46343291_46343309	0.1394243410575646	Rorc_Nr1d1	ENSMUST00000071648.12|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A	ENSMUST00000142351.9|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr17_-_46342739_46342789	0.13770994831955322	Rorc_Nr1d1	ENSMUST00000024747.14|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr2_-_48839218_48839268	0.11426765917678676	Rorc_Nr1d1	ENSMUST00000090976.10|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4	ENSMUST00000149679.8|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr17_+_25105617_25105739	0.11368126682074285	Rorc_Nr1d1	ENSMUST00000117890.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000168265.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000120943.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000068508.13|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000119829.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3
mm39_v1_chr16_+_21828223_21828275	0.11178017684742932	Rorc_Nr1d1	ENSMUST00000023561.8|Senp2|ENSMUSG00000022855.10|SUMO/sentrin specific peptidase 2
mm39_v1_chr2_-_86180622_86180628	0.10250174685603669	Rorc_Nr1d1	ENSMUST00000099894.5|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055	ENSMUST00000213564.3|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055
mm39_v1_chr1_+_151220222_151220280	0.10086461209351283	Rorc_Nr1d1	ENSMUST00000023918.13|Ivns1abp|ENSMUSG00000023150.15|influenza virus NS1A binding protein	ENSMUST00000111887.10|Ivns1abp|ENSMUSG00000023150.15|influenza virus NS1A binding protein	ENSMUST00000097543.8|Ivns1abp|ENSMUSG00000023150.15|influenza virus NS1A binding protein
mm39_v1_chr11_-_115518774_115518948	0.09970146899756176	Rorc_Nr1d1	ENSMUST00000154623.2|Slc25a19|ENSMUSG00000020744.14|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	ENSMUST00000106503.10|Slc25a19|ENSMUSG00000020744.14|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	ENSMUST00000141614.3|Slc25a19|ENSMUSG00000020744.14|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm39_v1_chr4_+_11558905_11558979	0.09969363874057179	Rorc_Nr1d1	ENSMUST00000095145.12|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)	ENSMUST00000108306.9|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)	ENSMUST00000070755.13|Rad54b|ENSMUSG00000078773.12|RAD54 homolog B (S. cerevisiae)
mm39_v1_chr7_-_79115915_79116110	0.09640117396386337	Rorc_Nr1d1	ENSMUST00000073889.14|Polg|ENSMUSG00000039176.18|polymerase (DNA directed), gamma
mm39_v1_chr2_+_29014106_29014193	0.09125050699231178	Rorc_Nr1d1	ENSMUST00000129544.8|Setx|ENSMUSG00000043535.14|senataxin
mm39_v1_chr12_-_34578842_34578903	0.09003484355908255	Rorc_Nr1d1	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr3_+_108291145_108291232	0.08965400193098322	Rorc_Nr1d1	ENSMUST00000090561.10|Psrc1|ENSMUSG00000068744.13|proline/serine-rich coiled-coil 1	ENSMUST00000102629.8|Psrc1|ENSMUSG00000068744.13|proline/serine-rich coiled-coil 1	ENSMUST00000128089.2|Psrc1|ENSMUSG00000068744.13|proline/serine-rich coiled-coil 1
mm39_v1_chr12_-_40298072_40298086	0.08783558986134811	Rorc_Nr1d1	ENSMUST00000169926.8|Ifrd1|ENSMUSG00000001627.13|interferon-related developmental regulator 1
mm39_v1_chr4_+_11579648_11579674	0.08656383846471641	Rorc_Nr1d1	ENSMUST00000180239.2|Fsbp|ENSMUSG00000094595.2|fibrinogen silencer binding protein
mm39_v1_chr17_-_25105277_25105327	0.07696268541189832	Rorc_Nr1d1	ENSMUST00000234583.2|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2	ENSMUST00000234968.2|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2	ENSMUST00000044252.7|Nubp2|ENSMUSG00000039183.7|nucleotide binding protein 2
mm39_v1_chr17_+_43671314_43671345	0.07580737138556086	Rorc_Nr1d1	ENSMUST00000226087.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5
mm39_v1_chr4_+_115641996_115642037	0.07511674810636304	Rorc_Nr1d1	ENSMUST00000177280.8|Atpaf1|ENSMUSG00000028710.19|ATP synthase mitochondrial F1 complex assembly factor 1	ENSMUST00000176047.8|Atpaf1|ENSMUSG00000028710.19|ATP synthase mitochondrial F1 complex assembly factor 1
mm39_v1_chr11_+_114780867_114781038	0.07364361479300811	Rorc_Nr1d1	ENSMUST00000106582.9|Cd300a|ENSMUSG00000034652.13|CD300A molecule	ENSMUST00000045151.6|Cd300a|ENSMUSG00000034652.13|CD300A molecule
mm39_v1_chr2_+_91541245_91541315	0.06813086520930998	Rorc_Nr1d1	ENSMUST00000142692.2|Harbi1|ENSMUSG00000027243.9|harbinger transposase derived 1	ENSMUST00000090608.6|Harbi1|ENSMUSG00000027243.9|harbinger transposase derived 1
mm39_v1_chr14_+_79086492_79086662	0.06719910521951107	Rorc_Nr1d1	ENSMUST00000040990.7|Vwa8|ENSMUSG00000058997.9|von Willebrand factor A domain containing 8
mm39_v1_chr6_-_124689001_124689034	0.06514490173925987	Rorc_Nr1d1	ENSMUST00000203238.2|Emg1|ENSMUSG00000004268.12|EMG1 N1-specific pseudouridine methyltransferase
mm39_v1_chr11_-_51526697_51526723	0.06284965561612102	Rorc_Nr1d1	ENSMUST00000001081.10|Rmnd5b|ENSMUSG00000001054.10|required for meiotic nuclear division 5 homolog B
mm39_v1_chr5_+_145020910_145020919	0.060893963156642715	Rorc_Nr1d1	ENSMUST00000124379.3|Arpc1a|ENSMUSG00000029621.15|actin related protein 2/3 complex, subunit 1A
mm39_v1_chr7_-_121620366_121620445	0.058754344693409365	Rorc_Nr1d1	ENSMUST00000033160.15|Gga2|ENSMUSG00000030872.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm39_v1_chr2_-_152857239_152857347	0.05555838132078997	Rorc_Nr1d1	ENSMUST00000028972.9|Pdrg1|ENSMUSG00000027472.15|p53 and DNA damage regulated 1
mm39_v1_chr12_+_3941728_3941801	0.05453128192640286	Rorc_Nr1d1	ENSMUST00000172689.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000111186.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr3_-_53370621_53370753	0.05225098651768928	Rorc_Nr1d1	ENSMUST00000056749.14|Nhlrc3|ENSMUSG00000042997.14|NHL repeat containing 3
mm39_v1_chr7_-_79115760_79115818	0.0516894711149015	Rorc_Nr1d1	ENSMUST00000125562.2|Polg|ENSMUSG00000039176.18|polymerase (DNA directed), gamma
mm39_v1_chr17_-_56440817_56440857	0.051315141986400026	Rorc_Nr1d1	ENSMUST00000167545.3|Sema6b|ENSMUSG00000001227.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm39_v1_chr8_-_85807281_85807302	0.050608363235063784	Rorc_Nr1d1	ENSMUST00000152785.8|Wdr83|ENSMUSG00000005150.17|WD repeat domain containing 83
mm39_v1_chr8_-_85807308_85807375	0.04970412954903794	Rorc_Nr1d1	ENSMUST00000093357.12|Wdr83|ENSMUSG00000005150.17|WD repeat domain containing 83
mm39_v1_chr11_+_96822213_96822342	0.049701383164161825	Rorc_Nr1d1	ENSMUST00000107633.2|Prr15l|ENSMUSG00000047040.10|proline rich 15-like
mm39_v1_chr2_+_153133326_153133378	0.048476287609395624	Rorc_Nr1d1	ENSMUST00000028977.7|Kif3b|ENSMUSG00000027475.10|kinesin family member 3B
mm39_v1_chr10_+_25317309_25317509	0.04803954486301886	Rorc_Nr1d1	ENSMUST00000217929.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2	ENSMUST00000220121.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr12_-_79237722_79237750	0.04715249843728993	Rorc_Nr1d1	ENSMUST00000085254.7|Rdh11|ENSMUSG00000066441.15|retinol dehydrogenase 11
mm39_v1_chr2_+_96148418_96148561	0.04691073907503272	Rorc_Nr1d1	ENSMUST00000135431.8|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C	ENSMUST00000162807.9|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C
mm39_v1_chr2_-_48839276_48839288	0.04597371987712824	Rorc_Nr1d1	ENSMUST00000028098.11|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr19_+_6434416_6434453	0.0452929702242648	Rorc_Nr1d1	ENSMUST00000035269.15|Pygm|ENSMUSG00000032648.15|muscle glycogen phosphorylase	ENSMUST00000113483.2|Pygm|ENSMUSG00000032648.15|muscle glycogen phosphorylase
mm39_v1_chr2_+_30331839_30331865	0.044674651207258956	Rorc_Nr1d1	ENSMUST00000131476.8|Ptpa|ENSMUSG00000039515.12|protein phosphatase 2 protein activator
mm39_v1_chr13_-_53135064_53135114	0.04408050756016079	Rorc_Nr1d1	ENSMUST00000071065.8|Nfil3|ENSMUSG00000056749.8|nuclear factor, interleukin 3, regulated
mm39_v1_chr5_+_135216090_135216126	0.04397639847769329	Rorc_Nr1d1	ENSMUST00000002825.6|Baz1b|ENSMUSG00000002748.8|bromodomain adjacent to zinc finger domain, 1B
mm39_v1_chr5_-_136275407_136275412	0.04142594370337971	Rorc_Nr1d1	ENSMUST00000196245.2|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2
mm39_v1_chr9_+_54771064_54771085	0.04057079149000342	Rorc_Nr1d1	ENSMUST00000034843.9|Ireb2|ENSMUSG00000032293.9|iron responsive element binding protein 2
mm39_v1_chr15_-_81756076_81756140	0.04005843310608126	Rorc_Nr1d1	ENSMUST00000023117.10|Phf5a|ENSMUSG00000061360.9|PHD finger protein 5A
mm39_v1_chr6_-_124519240_124519318	0.03991260254788439	Rorc_Nr1d1	ENSMUST00000159463.8|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1	ENSMUST00000162844.2|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1	ENSMUST00000160505.8|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1	ENSMUST00000162443.8|C1s1|ENSMUSG00000038521.18|complement component 1, s subcomponent 1
mm39_v1_chr17_+_38110779_38110882	0.03944488616075284	Rorc_Nr1d1	ENSMUST00000215168.2|Olfr124|ENSMUSG00000044985.7|olfactory receptor 124	ENSMUST00000216478.2|Olfr124|ENSMUSG00000044985.7|olfactory receptor 124
mm39_v1_chr11_-_110058899_110059022	0.037401766783322125	Rorc_Nr1d1	ENSMUST00000044850.4|Abca9|ENSMUSG00000041797.8|ATP-binding cassette, sub-family A (ABC1), member 9
mm39_v1_chr11_-_115518951_115518995	0.03734124185711457	Rorc_Nr1d1	ENSMUST00000155709.2|Slc25a19|ENSMUSG00000020744.14|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	ENSMUST00000021089.11|Slc25a19|ENSMUSG00000020744.14|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm39_v1_chr13_+_52750883_52750894	0.03704417396801192	Rorc_Nr1d1	ENSMUST00000055087.7|Syk|ENSMUSG00000021457.15|spleen tyrosine kinase
mm39_v1_chr6_-_29380467_29380512	0.036726788762060585	Rorc_Nr1d1	ENSMUST00000080428.13|Opn1sw|ENSMUSG00000058831.14|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm39_v1_chr7_+_13132040_13132057	0.03547866905776894	Rorc_Nr1d1	ENSMUST00000005791.14|Cabp5|ENSMUSG00000005649.18|calcium binding protein 5
mm39_v1_chr11_+_4833186_4833222	0.03391233302732576	Rorc_Nr1d1	ENSMUST00000139737.2|Nipsnap1|ENSMUSG00000034285.16|nipsnap homolog 1
mm39_v1_chr13_+_104365432_104365500	0.033799213171073865	Rorc_Nr1d1	ENSMUST00000070761.10|Cenpk|ENSMUSG00000021714.16|centromere protein K	ENSMUST00000225557.2|Cenpk|ENSMUSG00000021714.16|centromere protein K
mm39_v1_chr15_+_10486092_10486172	0.032522779297075914	Rorc_Nr1d1	ENSMUST00000022856.15|Rad1|ENSMUSG00000022248.15|RAD1 checkpoint DNA exonuclease	ENSMUST00000100775.10|Rad1|ENSMUSG00000022248.15|RAD1 checkpoint DNA exonuclease	ENSMUST00000169519.8|Rad1|ENSMUSG00000022248.15|RAD1 checkpoint DNA exonuclease
mm39_v1_chr3_-_103716593_103716760	0.031578315028960274	Rorc_Nr1d1	ENSMUST00000063502.13|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106832.2|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000106834.8|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B	ENSMUST00000029435.15|Dclre1b|ENSMUSG00000027845.16|DNA cross-link repair 1B
mm39_v1_chr11_+_40624763_40624776	0.030463589338376788	Rorc_Nr1d1	ENSMUST00000127382.2|Nudcd2|ENSMUSG00000020328.11|NudC domain containing 2
mm39_v1_chr5_+_145020640_145020725	0.02869833849753897	Rorc_Nr1d1	ENSMUST00000031625.15|Arpc1a|ENSMUSG00000029621.15|actin related protein 2/3 complex, subunit 1A
mm39_v1_chr15_-_66673425_66673448	0.027917241650270135	Rorc_Nr1d1	ENSMUST00000168589.8|Sla|ENSMUSG00000022372.15|src-like adaptor
mm39_v1_chr11_-_116089866_116089916	0.027782275858764787	Rorc_Nr1d1	ENSMUST00000066587.12|Acox1|ENSMUSG00000020777.17|acyl-Coenzyme A oxidase 1, palmitoyl
mm39_v1_chr12_+_116011332_116011398	0.02764272358622098	Rorc_Nr1d1	ENSMUST00000073551.6|Zfp386|ENSMUSG00000042063.12|zinc finger protein 386 (Kruppel-like)	ENSMUST00000183125.2|Zfp386|ENSMUSG00000042063.12|zinc finger protein 386 (Kruppel-like)
mm39_v1_chr12_-_72455708_72455828	0.027593760257352315	Rorc_Nr1d1	ENSMUST00000078505.14|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr1_+_171723231_171723231	0.027528687532106594	Rorc_Nr1d1	ENSMUST00000097466.3|Gm10521|ENSMUSG00000073492.3|predicted gene 10521
mm39_v1_chr11_-_3599673_3599673	0.026740997050129056	Rorc_Nr1d1	ENSMUST00000193809.2|Tug1|ENSMUSG00000056579.19|taurine upregulated gene 1
mm39_v1_chr7_-_119461027_119461086	0.02567475070044458	Rorc_Nr1d1	ENSMUST00000137888.2|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	ENSMUST00000142120.2|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm39_v1_chrX_-_48980360_48980360	0.025587910364417737	Rorc_Nr1d1	ENSMUST00000217355.3|Olfr1322|ENSMUSG00000056281.5|olfactory receptor 1322
mm39_v1_chr1_-_167112784_167112889	0.025033512828774914	Rorc_Nr1d1	ENSMUST00000053686.9|Uck2|ENSMUSG00000026558.14|uridine-cytidine kinase 2
mm39_v1_chr15_-_10485976_10486037	0.024627345633285412	Rorc_Nr1d1	ENSMUST00000169050.8|Brix1|ENSMUSG00000022247.13|BRX1, biogenesis of ribosomes	ENSMUST00000022855.12|Brix1|ENSMUSG00000022247.13|BRX1, biogenesis of ribosomes
mm39_v1_chr1_-_172418058_172418149	0.024606772041357475	Rorc_Nr1d1	ENSMUST00000065679.8|Slamf8|ENSMUSG00000053318.8|SLAM family member 8
mm39_v1_chr6_-_124689094_124689141	0.023735081451337597	Rorc_Nr1d1	ENSMUST00000004379.8|Emg1|ENSMUSG00000004268.12|EMG1 N1-specific pseudouridine methyltransferase
mm39_v1_chr1_+_75119472_75119624	0.021757561129140103	Rorc_Nr1d1	ENSMUST00000189650.7|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2
mm39_v1_chr2_+_91541197_91541242	0.021730442328773032	Rorc_Nr1d1	ENSMUST00000128140.2|Harbi1|ENSMUSG00000027243.9|harbinger transposase derived 1	ENSMUST00000140183.2|Harbi1|ENSMUSG00000027243.9|harbinger transposase derived 1
mm39_v1_chr3_-_107838895_107839049	0.021696738578371438	Rorc_Nr1d1	ENSMUST00000133947.9|Gstm7|ENSMUSG00000004035.13|glutathione S-transferase, mu 7	ENSMUST00000124215.2|Gstm7|ENSMUSG00000004035.13|glutathione S-transferase, mu 7	ENSMUST00000106688.8|Gstm7|ENSMUSG00000004035.13|glutathione S-transferase, mu 7	ENSMUST00000106687.9|Gstm7|ENSMUSG00000004035.13|glutathione S-transferase, mu 7
mm39_v1_chr14_-_55101505_55101615	0.021411222077844835	Rorc_Nr1d1	ENSMUST00000142283.4|Homez|ENSMUSG00000057156.11|homeodomain leucine zipper-encoding gene
mm39_v1_chr7_-_126807581_126807676	0.02141066211846014	Rorc_Nr1d1	ENSMUST00000120705.3|Tbc1d10b|ENSMUSG00000042492.13|TBC1 domain family, member 10b
mm39_v1_chr19_-_43928583_43928637	0.021312306878542586	Rorc_Nr1d1	ENSMUST00000212396.2|Dnmbp|ENSMUSG00000025195.10|dynamin binding protein
mm39_v1_chr17_-_52117894_52117947	0.019127396262816204	Rorc_Nr1d1	ENSMUST00000176669.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr13_+_21679387_21679409	0.018884723642510183	Rorc_Nr1d1	ENSMUST00000104942.2|AK157302|ENSMUSG00000078139.4|cDNA sequence AK157302
mm39_v1_chr14_-_40730180_40730232	0.01763173734794833	Rorc_Nr1d1	ENSMUST00000136661.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A
mm39_v1_chr15_+_58287305_58287361	0.017425600554525286	Rorc_Nr1d1	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr6_-_30873669_30873729	0.017056941150921892	Rorc_Nr1d1	ENSMUST00000048774.13|Copg2|ENSMUSG00000025607.16|coatomer protein complex, subunit gamma 2	ENSMUST00000166192.7|Copg2|ENSMUSG00000025607.16|coatomer protein complex, subunit gamma 2
mm39_v1_chr11_-_100418688_100418713	0.01653242563677614	Rorc_Nr1d1	ENSMUST00000107385.2|Acly|ENSMUSG00000020917.18|ATP citrate lyase
mm39_v1_chr7_+_126895531_126895582	0.0159198102011348	Rorc_Nr1d1	ENSMUST00000170971.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr16_-_21814289_21814413	0.015635514400035827	Rorc_Nr1d1	ENSMUST00000060673.8|Liph|ENSMUSG00000044626.14|lipase, member H
mm39_v1_chr11_-_116089595_116089635	0.015613191456683892	Rorc_Nr1d1	ENSMUST00000072948.11|Acox1|ENSMUSG00000020777.17|acyl-Coenzyme A oxidase 1, palmitoyl
mm39_v1_chr7_+_28393419_28393444	0.015529638509632848	Rorc_Nr1d1	ENSMUST00000108280.2|Fbxo27|ENSMUSG00000037463.15|F-box protein 27
mm39_v1_chr2_+_57887896_57887896	0.015411244956529051	Rorc_Nr1d1	ENSMUST00000112616.8|Galnt5|ENSMUSG00000026828.12|polypeptide N-acetylgalactosaminyltransferase 5	ENSMUST00000166729.2|Galnt5|ENSMUSG00000026828.12|polypeptide N-acetylgalactosaminyltransferase 5
mm39_v1_chr3_+_137573436_137573677	0.013691636633373276	Rorc_Nr1d1	ENSMUST00000090178.10|Dnajb14|ENSMUSG00000074212.8|DnaJ heat shock protein family (Hsp40) member B14
mm39_v1_chr11_-_115519086_115519122	0.013605801203781118	Rorc_Nr1d1	ENSMUST00000178003.8|Slc25a19|ENSMUSG00000020744.14|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm39_v1_chr10_-_116808514_116808514	0.013515788708114353	Rorc_Nr1d1	ENSMUST00000092165.5|Gm10271|ENSMUSG00000069518.6|predicted gene 10271
mm39_v1_chr7_+_139900771_139900771	0.013503025974655854	Rorc_Nr1d1	ENSMUST00000214594.2|Olfr525|ENSMUSG00000061489.4|olfactory receptor 525
mm39_v1_chr16_-_44379226_44379260	0.011988514909821044	Rorc_Nr1d1	ENSMUST00000114634.3|Boc|ENSMUSG00000022687.13|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm39_v1_chr11_-_119907884_119907986	0.011920509798975503	Rorc_Nr1d1	ENSMUST00000132575.8|Aatk|ENSMUSG00000025375.16|apoptosis-associated tyrosine kinase
mm39_v1_chr14_-_51134930_51134964	0.01135544255050693	Rorc_Nr1d1	ENSMUST00000227271.2|Klhl33|ENSMUSG00000090799.3|kelch-like 33
mm39_v1_chr15_-_5137951_5137971	0.010993826960960722	Rorc_Nr1d1	ENSMUST00000141020.2|Card6|ENSMUSG00000041849.8|caspase recruitment domain family, member 6
mm39_v1_chr10_-_128237087_128237103	0.010233220297635659	Rorc_Nr1d1	ENSMUST00000042666.13|Slc39a5|ENSMUSG00000039878.14|solute carrier family 39 (metal ion transporter), member 5
mm39_v1_chr5_+_4073343_4073415	0.010201856248042726	Rorc_Nr1d1	ENSMUST00000238634.2|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr17_+_47680097_47680136	0.009954396069947273	Rorc_Nr1d1	ENSMUST00000060752.13|Mrps10|ENSMUSG00000034729.17|mitochondrial ribosomal protein S10	ENSMUST00000119841.8|Mrps10|ENSMUSG00000034729.17|mitochondrial ribosomal protein S10
mm39_v1_chr7_-_99770280_99770303	0.009756013757126746	Rorc_Nr1d1	ENSMUST00000208184.2|Pold3|ENSMUSG00000030726.17|polymerase (DNA-directed), delta 3, accessory subunit
mm39_v1_chr8_-_3674993_3675015	0.009199908227784801	Rorc_Nr1d1	ENSMUST00000142431.8|Pcp2|ENSMUSG00000004630.19|Purkinje cell protein 2 (L7)
mm39_v1_chr12_+_71184614_71184614	0.008028667125752488	Rorc_Nr1d1	ENSMUST00000045907.16|2700049A03Rik|ENSMUSG00000034601.18|RIKEN cDNA 2700049A03 gene
mm39_v1_chr2_-_91540864_91540927	0.008018473323673702	Rorc_Nr1d1	ENSMUST00000028678.9|Atg13|ENSMUSG00000027244.15|autophagy related 13	ENSMUST00000076803.12|Atg13|ENSMUSG00000027244.15|autophagy related 13
mm39_v1_chr2_+_86832276_86832276	0.007741811332887758	Rorc_Nr1d1	ENSMUST00000055129.6|Olfr1102|ENSMUSG00000049843.7|olfactory receptor 1102
mm39_v1_chr9_+_65368207_65368276	0.007363935656067335	Rorc_Nr1d1	ENSMUST00000034955.8|Spg21|ENSMUSG00000032388.8|SPG21, maspardin	ENSMUST00000213957.2|Spg21|ENSMUSG00000032388.8|SPG21, maspardin
mm39_v1_chr4_-_33189390_33189455	0.006983793963132684	Rorc_Nr1d1	ENSMUST00000098181.9|Pm20d2|ENSMUSG00000054659.14|peptidase M20 domain containing 2
mm39_v1_chr4_-_20778847_20778878	0.00636786362588948	Rorc_Nr1d1	ENSMUST00000102998.4|Nkain3|ENSMUSG00000055761.15|Na+/K+ transporting ATPase interacting 3
mm39_v1_chr2_-_5867734_5867734	0.005784988857644152	Rorc_Nr1d1	ENSMUST00000071016.3|Gm13199|ENSMUSG00000056718.3|predicted gene 13199
mm39_v1_chrX_+_102465616_102465616	0.005626971443906229	Rorc_Nr1d1	ENSMUST00000182089.2|Gm26992|ENSMUSG00000098078.2|predicted gene, 26992
mm39_v1_chr1_+_86631510_86631565	0.005557763924309085	Rorc_Nr1d1	ENSMUST00000168237.8|Dis3l2|ENSMUSG00000053333.16|DIS3 like 3'-5' exoribonuclease 2	ENSMUST00000065694.8|Dis3l2|ENSMUSG00000053333.16|DIS3 like 3'-5' exoribonuclease 2
mm39_v1_chr2_+_155593030_155593043	0.00498103907428828	Rorc_Nr1d1	ENSMUST00000029140.12|Procr|ENSMUSG00000027611.13|protein C receptor, endothelial	ENSMUST00000132608.2|Procr|ENSMUSG00000027611.13|protein C receptor, endothelial
mm39_v1_chr1_-_120432477_120432497	0.004516435102359714	Rorc_Nr1d1	ENSMUST00000186432.3|Marco|ENSMUSG00000026390.8|macrophage receptor with collagenous structure
mm39_v1_chr2_+_158344553_158344618	0.004387781587508664	Rorc_Nr1d1	ENSMUST00000109484.2|Adig|ENSMUSG00000044405.5|adipogenin
mm39_v1_chr19_-_47680528_47680535	0.0042967100291634855	Rorc_Nr1d1	ENSMUST00000026045.14|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1	ENSMUST00000086923.6|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1
mm39_v1_chr8_-_3675274_3675288	0.003404204247575443	Rorc_Nr1d1	ENSMUST00000004749.7|Pcp2|ENSMUSG00000004630.19|Purkinje cell protein 2 (L7)
mm39_v1_chr2_+_158344532_158344552	0.0031789518708323244	Rorc_Nr1d1	ENSMUST00000059889.4|Adig|ENSMUSG00000044405.5|adipogenin
mm39_v1_chr15_-_97629209_97629227	0.0030856960652472865	Rorc_Nr1d1	ENSMUST00000100249.10|Endou|ENSMUSG00000022468.13|endonuclease, polyU-specific
mm39_v1_chr14_-_51134906_51134914	0.002764818535125975	Rorc_Nr1d1	ENSMUST00000170855.2|Klhl33|ENSMUSG00000090799.3|kelch-like 33
mm39_v1_chr11_+_95603494_95603529	0.002534119441743893	Rorc_Nr1d1	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr15_-_5137975_5138050	0.002191716088061212	Rorc_Nr1d1	ENSMUST00000118365.3|Card6|ENSMUSG00000041849.8|caspase recruitment domain family, member 6
mm39_v1_chr6_+_29361408_29361460	0.002047774384843043	Rorc_Nr1d1	ENSMUST00000156163.2|Calu|ENSMUSG00000029767.17|calumenin
mm39_v1_chr4_-_116228921_116228941	0.0017966131833047744	Rorc_Nr1d1	ENSMUST00000239239.2|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2	ENSMUST00000239177.2|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2
mm39_v1_chr1_-_180021039_180021057	0.0017047498039615995	Rorc_Nr1d1	ENSMUST00000160482.8|Coq8a|ENSMUSG00000026489.14|coenzyme Q8A	ENSMUST00000170472.8|Coq8a|ENSMUSG00000026489.14|coenzyme Q8A
mm39_v1_chr1_+_75119809_75119916	0.0016519907484634994	Rorc_Nr1d1	ENSMUST00000186037.7|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2	ENSMUST00000187901.2|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2
mm39_v1_chr7_-_141729738_141729744	0.0015018250441560617	Rorc_Nr1d1	ENSMUST00000190456.2|Krtap5-2|ENSMUSG00000054759.7|keratin associated protein 5-2	ENSMUST00000067978.6|Krtap5-2|ENSMUSG00000054759.7|keratin associated protein 5-2
mm39_v1_chr3_+_90507510_90507526	0.001460589509172721	Rorc_Nr1d1	ENSMUST00000001047.8|S100a3|ENSMUSG00000001021.14|S100 calcium binding protein A3
mm39_v1_chr7_+_126808016_126808071	0.001283619826155876	Rorc_Nr1d1	ENSMUST00000206204.2|Mylpf|ENSMUSG00000030672.13|myosin light chain, phosphorylatable, fast skeletal muscle	ENSMUST00000206772.2|Mylpf|ENSMUSG00000030672.13|myosin light chain, phosphorylatable, fast skeletal muscle
mm39_v1_chr6_+_70332836_70332836	0.0012708965368060333	Rorc_Nr1d1	ENSMUST00000103390.3|Igkv8-18|ENSMUSG00000076589.3|immunoglobulin kappa variable 8-18
mm39_v1_chr8_-_107792264_107792283	0.0009143355323252518	Rorc_Nr1d1	ENSMUST00000034393.7|Tmed6|ENSMUSG00000031919.7|transmembrane p24 trafficking protein 6
mm39_v1_chr5_+_90708962_90709076	0.0008917647451309486	Rorc_Nr1d1	ENSMUST00000094615.8|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1	ENSMUST00000200765.2|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1
mm39_v1_chr7_+_126895463_126895492	0.0008743195113718586	Rorc_Nr1d1	ENSMUST00000106306.9|Itgal|ENSMUSG00000030830.19|integrin alpha L	ENSMUST00000120857.8|Itgal|ENSMUSG00000030830.19|integrin alpha L
mm39_v1_chr7_+_126810780_126810883	0.0007200853317414054	Rorc_Nr1d1	ENSMUST00000032910.13|Mylpf|ENSMUSG00000030672.13|myosin light chain, phosphorylatable, fast skeletal muscle
mm39_v1_chr18_-_39000056_39000070	0.0005743980597497262	Rorc_Nr1d1	ENSMUST00000236630.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000237356.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr5_+_88635834_88635841	0.0005167774507110726	Rorc_Nr1d1	ENSMUST00000199104.5|Enam|ENSMUSG00000029286.13|enamelin	ENSMUST00000031222.9|Enam|ENSMUSG00000029286.13|enamelin
mm39_v1_chr14_+_53100756_53100822	0.00038474983227879047	Rorc_Nr1d1	ENSMUST00000103616.5|Trav15d-1-dv6d-1|ENSMUSG00000096653.5|T cell receptor alpha variable 15D-1-DV6D-1	ENSMUST00000186370.2|Trav15d-1-dv6d-1|ENSMUSG00000096653.5|T cell receptor alpha variable 15D-1-DV6D-1
mm39_v1_chr11_-_100418717_100418826	0.00026434250304502896	Rorc_Nr1d1	ENSMUST00000107389.8|Acly|ENSMUSG00000020917.18|ATP citrate lyase	ENSMUST00000007131.16|Acly|ENSMUSG00000020917.18|ATP citrate lyase
mm39_v1_chr3_-_92493507_92493513	0.0002158829879365301	Rorc_Nr1d1	ENSMUST00000194965.6|Smcp|ENSMUSG00000074435.11|sperm mitochondria-associated cysteine-rich protein
