mm39_v1_chr11_+_45946800_45946895	0.5839060771596604	UCAAGUA	ENSMUST00000011400.8|Adam19|ENSMUSG00000011256.17|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm39_v1_chr13_-_40887244_40887313	0.35458748617059577	UCAAGUA	ENSMUST00000110193.9|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr16_+_37909363_37909426	0.31248870160657255	UCAAGUA	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr3_-_122778052_122778163	0.29891844503854553	UCAAGUA	ENSMUST00000199401.2|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000197314.5|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000197934.5|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000090379.7|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53
mm39_v1_chr14_+_48358267_48358285	0.29275540411069795	UCAAGUA	ENSMUST00000073150.6|Peli2|ENSMUSG00000021846.10|pellino 2
mm39_v1_chr9_-_43017249_43017322	0.28720587172009887	UCAAGUA	ENSMUST00000165665.9|Arhgef12|ENSMUSG00000059495.15|Rho guanine nucleotide exchange factor (GEF) 12
mm39_v1_chr16_-_4031814_4031861	0.2857641493221155	UCAAGUA	ENSMUST00000023165.9|Crebbp|ENSMUSG00000022521.11|CREB binding protein
mm39_v1_chr3_-_100396635_100396652	0.2829693840314755	UCAAGUA	ENSMUST00000061455.9|Tent5c|ENSMUSG00000044468.15|terminal nucleotidyltransferase 5C
mm39_v1_chr10_-_115220293_115220350	0.25777134237471755	UCAAGUA	ENSMUST00000020346.6|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2	ENSMUST00000218842.2|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2	ENSMUST00000218989.2|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2
mm39_v1_chr16_+_38562616_38562683	0.24908388276797286	UCAAGUA	ENSMUST00000023482.13|B4galt4|ENSMUSG00000022793.18|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	ENSMUST00000114712.8|B4galt4|ENSMUSG00000022793.18|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	ENSMUST00000231655.2|B4galt4|ENSMUSG00000022793.18|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm39_v1_chr2_+_22512195_22512217	0.23711646832304953	UCAAGUA	ENSMUST00000028123.4|Gad2|ENSMUSG00000026787.4|glutamic acid decarboxylase 2
mm39_v1_chr8_+_36054919_36054981	0.23561531386655513	UCAAGUA	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr8_-_123768759_123768834	0.23544197117245058	UCAAGUA	ENSMUST00000098334.13|Ankrd11|ENSMUSG00000035569.18|ankyrin repeat domain 11
mm39_v1_chr2_-_25873189_25873304	0.235430856908415	UCAAGUA	ENSMUST00000114167.9|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000091268.11|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000183461.8|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1
mm39_v1_chrX_+_102400061_102400094	0.23375507696274622	UCAAGUA	ENSMUST00000116547.3|Chic1|ENSMUSG00000031327.11|cysteine-rich hydrophobic domain 1
mm39_v1_chr6_-_113172340_113172349	0.23122514732424143	UCAAGUA	ENSMUST00000162280.2|Lhfpl4|ENSMUSG00000042873.12|lipoma HMGIC fusion partner-like protein 4
mm39_v1_chr11_+_98754434_98754472	0.2294157281482752	UCAAGUA	ENSMUST00000142414.8|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2	ENSMUST00000037480.9|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2
mm39_v1_chrX_-_7242065_7242069	0.22898372851234153	UCAAGUA	ENSMUST00000191497.2|Usp27x|ENSMUSG00000046269.18|ubiquitin specific peptidase 27, X chromosome	ENSMUST00000115744.2|Usp27x|ENSMUSG00000046269.18|ubiquitin specific peptidase 27, X chromosome
mm39_v1_chr10_+_115220826_115220927	0.21446167476965675	UCAAGUA	ENSMUST00000036044.9|Zfc3h1|ENSMUSG00000034163.11|zinc finger, C3H1-type containing
mm39_v1_chr12_-_72455708_72455828	0.20487391027439358	UCAAGUA	ENSMUST00000078505.14|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr5_-_25305621_25305655	0.20235091454782653	UCAAGUA	ENSMUST00000030784.14|Prkag2|ENSMUSG00000028944.15|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm39_v1_chr8_+_109441276_109441276	0.2010499657730632	UCAAGUA	ENSMUST00000043896.10|Zfhx3|ENSMUSG00000038872.11|zinc finger homeobox 3
mm39_v1_chr6_-_116170389_116170462	0.18989937965940223	UCAAGUA	ENSMUST00000088896.10|Tmcc1|ENSMUSG00000030126.18|transmembrane and coiled coil domains 1
mm39_v1_chr1_+_136059101_136059142	0.18657955406835908	UCAAGUA	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr9_+_59658156_59658205	0.18474696652039707	UCAAGUA	ENSMUST00000136740.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000135298.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000128341.2|Myo9a|ENSMUSG00000039585.16|myosin IXa
mm39_v1_chr11_-_115494692_115494877	0.1840007133538499	UCAAGUA	ENSMUST00000125097.2|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3	ENSMUST00000019135.14|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3	ENSMUST00000106508.10|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3
mm39_v1_chr5_+_32293145_32293201	0.1824223573905871	UCAAGUA	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr10_+_59942020_59942043	0.18232088420651857	UCAAGUA	ENSMUST00000121820.9|Spock2|ENSMUSG00000058297.17|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm39_v1_chr11_+_77107006_77107113	0.18134166002176183	UCAAGUA	ENSMUST00000156488.8|Ssh2|ENSMUSG00000037926.16|slingshot protein phosphatase 2	ENSMUST00000037912.12|Ssh2|ENSMUSG00000037926.16|slingshot protein phosphatase 2
mm39_v1_chr14_-_25769457_25769513	0.1797448478408652	UCAAGUA	ENSMUST00000069180.8|Zcchc24|ENSMUSG00000055538.8|zinc finger, CCHC domain containing 24
mm39_v1_chr8_+_117884711_117884876	0.17743138610576595	UCAAGUA	ENSMUST00000064488.11|Gan|ENSMUSG00000052557.12|giant axonal neuropathy	ENSMUST00000162997.3|Gan|ENSMUSG00000052557.12|giant axonal neuropathy
mm39_v1_chr15_-_71906051_71906076	0.167127898441442	UCAAGUA	ENSMUST00000159993.8|Col22a1|ENSMUSG00000079022.11|collagen, type XXII, alpha 1
mm39_v1_chr14_-_69522431_69522561	0.16437004596691968	UCAAGUA	ENSMUST00000183882.2|Slc25a37|ENSMUSG00000034248.8|solute carrier family 25, member 37	ENSMUST00000037064.5|Slc25a37|ENSMUSG00000034248.8|solute carrier family 25, member 37
mm39_v1_chr19_-_47452840_47452894	0.1627810966056653	UCAAGUA	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr3_-_133250129_133250174	0.1627300073411009	UCAAGUA	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr6_-_97594498_97594558	0.15805454594780316	UCAAGUA	ENSMUST00000113355.9|Frmd4b|ENSMUSG00000030064.17|FERM domain containing 4B
mm39_v1_chr11_+_117545618_117545655	0.15805256762523134	UCAAGUA	ENSMUST00000106344.8|Tnrc6c|ENSMUSG00000025571.14|trinucleotide repeat containing 6C
mm39_v1_chr11_+_115272732_115272759	0.1562519166552553	UCAAGUA	ENSMUST00000053288.6|Cdr2l|ENSMUSG00000050910.6|cerebellar degeneration-related protein 2-like
mm39_v1_chr2_+_163444214_163444242	0.1536256204915572	UCAAGUA	ENSMUST00000171696.8|Ttpal|ENSMUSG00000017679.17|tocopherol (alpha) transfer protein-like	ENSMUST00000109408.10|Ttpal|ENSMUSG00000017679.17|tocopherol (alpha) transfer protein-like
mm39_v1_chr6_-_83418656_83418666	0.14998969162930098	UCAAGUA	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr6_-_120015608_120015660	0.14400438862122694	UCAAGUA	ENSMUST00000177761.8|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1	ENSMUST00000088644.13|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1	ENSMUST00000060043.13|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr18_+_39126178_39126240	0.13990007602328344	UCAAGUA	ENSMUST00000097593.9|Arhgap26|ENSMUSG00000036452.19|Rho GTPase activating protein 26
mm39_v1_chr18_-_16942289_16942384	0.13926997295537147	UCAAGUA	ENSMUST00000025166.14|Cdh2|ENSMUSG00000024304.15|cadherin 2
mm39_v1_chr19_-_31742427_31742480	0.13801303019402136	UCAAGUA	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr15_+_54975713_54975799	0.13640913206635416	UCAAGUA	ENSMUST00000096433.10|Deptor|ENSMUSG00000022419.17|DEP domain containing MTOR-interacting protein
mm39_v1_chr3_-_95725944_95726114	0.13509869938240246	UCAAGUA	ENSMUST00000200164.5|Rprd2|ENSMUSG00000028106.14|regulation of nuclear pre-mRNA domain containing 2	ENSMUST00000090791.8|Rprd2|ENSMUSG00000028106.14|regulation of nuclear pre-mRNA domain containing 2	ENSMUST00000197449.2|Rprd2|ENSMUSG00000028106.14|regulation of nuclear pre-mRNA domain containing 2
mm39_v1_chr14_+_69846517_69846517	0.133889505459848	UCAAGUA	ENSMUST00000022660.14|Loxl2|ENSMUSG00000034205.17|lysyl oxidase-like 2
mm39_v1_chr17_+_87270504_87270537	0.13109092162901254	UCAAGUA	ENSMUST00000024956.15|Rhoq|ENSMUSG00000024143.16|ras homolog family member Q
mm39_v1_chr6_+_149210889_149210936	0.12992354976916337	UCAAGUA	ENSMUST00000130664.8|Resf1|ENSMUSG00000032712.17|retroelement silencing factor 1	ENSMUST00000046689.13|Resf1|ENSMUSG00000032712.17|retroelement silencing factor 1
mm39_v1_chr6_+_21985902_21985971	0.12684734061281186	UCAAGUA	ENSMUST00000115383.9|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr6_+_108190050_108190065	0.12667320538945717	UCAAGUA	ENSMUST00000032192.9|Itpr1|ENSMUSG00000030102.12|inositol 1,4,5-trisphosphate receptor 1
mm39_v1_chrX_-_133062677_133062677	0.1261102035816461	UCAAGUA	ENSMUST00000033611.5|Xkrx|ENSMUSG00000031258.5|X-linked Kx blood group related, X-linked
mm39_v1_chr7_+_127344942_127344999	0.1259119768945576	UCAAGUA	ENSMUST00000189562.7|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19	ENSMUST00000186116.7|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19
mm39_v1_chr16_+_51851588_51851705	0.12587715087140913	UCAAGUA	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr17_+_87061117_87061137	0.12511629176166644	UCAAGUA	ENSMUST00000024954.11|Epas1|ENSMUSG00000024140.11|endothelial PAS domain protein 1
mm39_v1_chr8_-_106553822_106553982	0.12375535900618209	UCAAGUA	ENSMUST00000239468.2|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10	ENSMUST00000041400.6|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10
mm39_v1_chr12_-_81827893_81827949	0.12235455786457498	UCAAGUA	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr15_-_38300937_38300959	0.12019700753904554	UCAAGUA	ENSMUST00000227920.2|Klf10|ENSMUSG00000037465.11|Kruppel-like factor 10	ENSMUST00000074043.7|Klf10|ENSMUSG00000037465.11|Kruppel-like factor 10	ENSMUST00000228416.2|Klf10|ENSMUSG00000037465.11|Kruppel-like factor 10
mm39_v1_chr15_+_81469538_81469598	0.11699357623756923	UCAAGUA	ENSMUST00000068387.11|Ep300|ENSMUSG00000055024.13|E1A binding protein p300
mm39_v1_chr7_-_34755985_34756002	0.11694735481890327	UCAAGUA	ENSMUST00000130491.3|Cebpg|ENSMUSG00000056216.10|CCAAT/enhancer binding protein (C/EBP), gamma
mm39_v1_chr10_-_5872386_5872405	0.11532552333028036	UCAAGUA	ENSMUST00000131996.8|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17	ENSMUST00000064225.14|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17
mm39_v1_chr6_+_38410848_38410901	0.11529894811375938	UCAAGUA	ENSMUST00000160583.8|Ubn2|ENSMUSG00000038538.18|ubinuclein 2
mm39_v1_chr12_+_4967376_4967438	0.11374927804983112	UCAAGUA	ENSMUST00000045664.7|Atad2b|ENSMUSG00000052812.6|ATPase family, AAA domain containing 2B
mm39_v1_chr13_+_49697919_49698009	0.11328965067385652	UCAAGUA	ENSMUST00000177948.2|Aspn|ENSMUSG00000021388.15|asporin	ENSMUST00000021820.14|Aspn|ENSMUSG00000021388.15|asporin
mm39_v1_chr9_-_95288775_95288775	0.1121290219055886	UCAAGUA	ENSMUST00000036267.8|Chst2|ENSMUSG00000033350.8|carbohydrate sulfotransferase 2
mm39_v1_chr11_-_99134885_99134964	0.1113457109206228	UCAAGUA	ENSMUST00000103132.10|Krt222|ENSMUSG00000035849.15|keratin 222	ENSMUST00000038214.7|Krt222|ENSMUSG00000035849.15|keratin 222
mm39_v1_chr16_+_32882882_32882919	0.11001283946928095	UCAAGUA	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chr8_-_103512274_103512408	0.10978301619543639	UCAAGUA	ENSMUST00000075190.5|Cdh11|ENSMUSG00000031673.7|cadherin 11
mm39_v1_chr5_-_25703700_25703841	0.10926458707928775	UCAAGUA	ENSMUST00000173073.8|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000045291.14|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000173174.2|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C
mm39_v1_chr14_+_54669054_54669131	0.10902560399836753	UCAAGUA	ENSMUST00000089688.6|Mmp14|ENSMUSG00000000957.12|matrix metallopeptidase 14 (membrane-inserted)	ENSMUST00000225641.2|Mmp14|ENSMUSG00000000957.12|matrix metallopeptidase 14 (membrane-inserted)
mm39_v1_chr5_-_110918393_110918495	0.10852580995546247	UCAAGUA	ENSMUST00000041558.15|Ep400|ENSMUSG00000029505.18|E1A binding protein p400	ENSMUST00000146458.9|Ep400|ENSMUSG00000029505.18|E1A binding protein p400
mm39_v1_chr5_+_147367237_147367355	0.10781330596908567	UCAAGUA	ENSMUST00000176600.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr13_+_31809774_31809799	0.10779999532064655	UCAAGUA	ENSMUST00000042054.3|Foxf2|ENSMUSG00000038402.3|forkhead box F2
mm39_v1_chr14_+_49303952_49304045	0.10746768723634227	UCAAGUA	ENSMUST00000037473.6|Ap5m1|ENSMUSG00000036291.7|adaptor-related protein complex 5, mu 1 subunit	ENSMUST00000228238.2|Ap5m1|ENSMUSG00000036291.7|adaptor-related protein complex 5, mu 1 subunit
mm39_v1_chr19_+_44919585_44919613	0.10579213442721427	UCAAGUA	ENSMUST00000096053.5|Slf2|ENSMUSG00000036097.9|SMC5-SMC6 complex localization factor 2
mm39_v1_chr15_+_80595486_80595541	0.1045755887294403	UCAAGUA	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr18_+_82928959_82929005	0.10293909388454586	UCAAGUA	ENSMUST00000171238.8|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr4_-_135300934_135300954	0.10263255061512785	UCAAGUA	ENSMUST00000105855.2|Grhl3|ENSMUSG00000037188.8|grainyhead like transcription factor 3
mm39_v1_chr4_-_43040278_43040318	0.10258927631649155	UCAAGUA	ENSMUST00000107958.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B	ENSMUST00000107959.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B	ENSMUST00000152846.8|Fam214b|ENSMUSG00000036002.13|family with sequence similarity 214, member B
mm39_v1_chrX_+_150586309_150586372	0.10188118892609807	UCAAGUA	ENSMUST00000026292.15|Huwe1|ENSMUSG00000025261.19|HECT, UBA and WWE domain containing 1
mm39_v1_chr16_-_23807602_23807602	0.10181733817766592	UCAAGUA	ENSMUST00000023151.6|Bcl6|ENSMUSG00000022508.6|B cell leukemia/lymphoma 6
mm39_v1_chr5_+_117457126_117457185	0.10076233072965649	UCAAGUA	ENSMUST00000111967.8|Vsig10|ENSMUSG00000066894.15|V-set and immunoglobulin domain containing 10
mm39_v1_chr9_+_65816206_65816302	0.09945900109973214	UCAAGUA	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr1_+_105591595_105591648	0.09907546920891422	UCAAGUA	ENSMUST00000039173.13|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	ENSMUST00000086721.10|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	ENSMUST00000190501.7|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
mm39_v1_chr7_+_108610032_108610042	0.09889886538297506	UCAAGUA	ENSMUST00000033341.12|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr10_+_110581293_110581433	0.0981920573055139	UCAAGUA	ENSMUST00000174857.8|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7	ENSMUST00000073781.12|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7	ENSMUST00000173471.8|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7	ENSMUST00000173634.2|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7
mm39_v1_chr15_+_30172716_30172748	0.09619979937094002	UCAAGUA	ENSMUST00000081728.7|Ctnnd2|ENSMUSG00000022240.11|catenin (cadherin associated protein), delta 2
mm39_v1_chr9_+_121548237_121548344	0.09582051998229646	UCAAGUA	ENSMUST00000035112.13|Nktr|ENSMUSG00000032525.16|natural killer tumor recognition sequence	ENSMUST00000182311.8|Nktr|ENSMUSG00000032525.16|natural killer tumor recognition sequence
mm39_v1_chr2_+_121120070_121120087	0.09521764136573956	UCAAGUA	ENSMUST00000094639.10|Map1a|ENSMUSG00000027254.14|microtubule-associated protein 1 A
mm39_v1_chr2_+_37406630_37406647	0.09521621033004618	UCAAGUA	ENSMUST00000065441.7|Gpr21|ENSMUSG00000053164.7|G protein-coupled receptor 21
mm39_v1_chr10_+_74896383_74896461	0.0939522739254546	UCAAGUA	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr17_+_28128307_28128532	0.09309644067100414	UCAAGUA	ENSMUST00000233525.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000025058.15|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000233866.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1
mm39_v1_chr5_+_124577952_124578061	0.09280170174617328	UCAAGUA	ENSMUST00000059580.11|Kmt5a|ENSMUSG00000049327.18|lysine methyltransferase 5A
mm39_v1_chr5_+_139366336_139366463	0.0916953734571759	UCAAGUA	ENSMUST00000051293.8|Gpr146|ENSMUSG00000044197.9|G protein-coupled receptor 146
mm39_v1_chr2_-_160950936_160950950	0.09117957379122393	UCAAGUA	ENSMUST00000039782.14|Chd6|ENSMUSG00000057133.15|chromodomain helicase DNA binding protein 6	ENSMUST00000134178.8|Chd6|ENSMUSG00000057133.15|chromodomain helicase DNA binding protein 6
mm39_v1_chr17_-_17845293_17845329	0.09103628603659665	UCAAGUA	ENSMUST00000041047.4|Lnpep|ENSMUSG00000023845.8|leucyl/cystinyl aminopeptidase
mm39_v1_chr9_+_64718596_64718622	0.09064816908463463	UCAAGUA	ENSMUST00000038890.6|Dennd4a|ENSMUSG00000053641.10|DENN/MADD domain containing 4A
mm39_v1_chr16_+_43993599_43993760	0.08931293068093038	UCAAGUA	ENSMUST00000119746.8|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000088356.10|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000169582.3|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3
mm39_v1_chr7_+_122723365_122723446	0.08885026275921912	UCAAGUA	ENSMUST00000205514.2|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a	ENSMUST00000094053.7|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a
mm39_v1_chr3_-_9069745_9069809	0.08871342964830291	UCAAGUA	ENSMUST00000120143.8|Tpd52|ENSMUSG00000027506.16|tumor protein D52
mm39_v1_chr10_+_126814542_126814618	0.08845572193564982	UCAAGUA	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr1_-_136273811_136273884	0.08824377893725782	UCAAGUA	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr1_-_155848917_155849012	0.08785193842007892	UCAAGUA	ENSMUST00000138762.8|Cep350|ENSMUSG00000033671.19|centrosomal protein 350
mm39_v1_chr4_+_137321451_137321585	0.08455266709700694	UCAAGUA	ENSMUST00000105840.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105839.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000055131.13|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105838.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48
mm39_v1_chr1_+_59012680_59012741	0.08437185873121478	UCAAGUA	ENSMUST00000114296.8|Stradb|ENSMUSG00000026027.14|STE20-related kinase adaptor beta	ENSMUST00000027185.11|Stradb|ENSMUSG00000026027.14|STE20-related kinase adaptor beta
mm39_v1_chr4_+_132366298_132366430	0.08430190130422058	UCAAGUA	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr7_+_82516491_82516604	0.08353286684682468	UCAAGUA	ENSMUST00000082237.7|Mex3b|ENSMUSG00000057706.8|mex3 RNA binding family member B
mm39_v1_chr10_-_66932685_66932738	0.08328874882399001	UCAAGUA	ENSMUST00000020023.9|Reep3|ENSMUSG00000019873.9|receptor accessory protein 3
mm39_v1_chr14_-_75185281_75185324	0.08170890627986456	UCAAGUA	ENSMUST00000088970.7|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1	ENSMUST00000228252.2|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1
mm39_v1_chr11_+_31822211_31822263	0.08157283540981697	UCAAGUA	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr12_+_40495951_40496015	0.08153499442846461	UCAAGUA	ENSMUST00000037488.8|Dock4|ENSMUSG00000035954.11|dedicator of cytokinesis 4
mm39_v1_chr10_-_25076008_25076076	0.08140973753837451	UCAAGUA	ENSMUST00000100012.3|Akap7|ENSMUSG00000039166.17|A kinase (PRKA) anchor protein 7
mm39_v1_chr5_-_31337453_31337502	0.0811329820410881	UCAAGUA	ENSMUST00000202639.4|Gtf3c2|ENSMUSG00000106864.4|general transcription factor IIIC, polypeptide 2, beta	ENSMUST00000088010.12|Gtf3c2|ENSMUSG00000106864.4|general transcription factor IIIC, polypeptide 2, beta
mm39_v1_chr13_+_9143995_9144018	0.08019737840397673	UCAAGUA	ENSMUST00000091829.4|Larp4b|ENSMUSG00000033499.15|La ribonucleoprotein domain family, member 4B
mm39_v1_chr1_+_133058881_133058992	0.0792654403989358	UCAAGUA	ENSMUST00000052529.4|Ppp1r15b|ENSMUSG00000046062.6|protein phosphatase 1, regulatory subunit 15B
mm39_v1_chr3_+_102965601_102965684	0.07871698633674573	UCAAGUA	ENSMUST00000029445.13|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene	ENSMUST00000200069.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene
mm39_v1_chr15_-_79430942_79430986	0.07827325908357939	UCAAGUA	ENSMUST00000054014.9|Ddx17|ENSMUSG00000055065.8|DEAD box helicase 17	ENSMUST00000229877.2|Ddx17|ENSMUSG00000055065.8|DEAD box helicase 17
mm39_v1_chr15_+_84807582_84807625	0.0781595842204875	UCAAGUA	ENSMUST00000165443.4|Nup50|ENSMUSG00000016619.11|nucleoporin 50
mm39_v1_chr11_+_57536260_57536315	0.07752710790822219	UCAAGUA	ENSMUST00000066987.14|Galnt10|ENSMUSG00000020520.15|polypeptide N-acetylgalactosaminyltransferase 10	ENSMUST00000108846.2|Galnt10|ENSMUSG00000020520.15|polypeptide N-acetylgalactosaminyltransferase 10
mm39_v1_chr9_-_81515865_81515892	0.0767971977130091	UCAAGUA	ENSMUST00000183482.2|Htr1b|ENSMUSG00000049511.6|5-hydroxytryptamine (serotonin) receptor 1B
mm39_v1_chr1_+_104696235_104696254	0.07535561801446546	UCAAGUA	ENSMUST00000062528.9|Cdh20|ENSMUSG00000050840.9|cadherin 20
mm39_v1_chr1_-_133849131_133849152	0.07516140055121961	UCAAGUA	ENSMUST00000048432.6|Prelp|ENSMUSG00000041577.6|proline arginine-rich end leucine-rich repeat
mm39_v1_chr1_-_74544946_74545004	0.07488304618964796	UCAAGUA	ENSMUST00000044260.11|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37	ENSMUST00000186282.7|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37
mm39_v1_chr1_-_51517548_51517584	0.07483580809080695	UCAAGUA	ENSMUST00000027279.12|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000186684.7|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000188204.7|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000185534.2|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1	ENSMUST00000188051.7|Nabp1|ENSMUSG00000026107.12|nucleic acid binding protein 1
mm39_v1_chr19_-_60779077_60779105	0.0729465142079993	UCAAGUA	ENSMUST00000025955.8|Eif3a|ENSMUSG00000024991.9|eukaryotic translation initiation factor 3, subunit A
mm39_v1_chr19_+_28812474_28812541	0.07261000352872919	UCAAGUA	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr1_+_105918383_105918450	0.07200878104232311	UCAAGUA	ENSMUST00000119166.8|Zcchc2|ENSMUSG00000038866.16|zinc finger, CCHC domain containing 2
mm39_v1_chr10_+_69932930_69933066	0.0716658783527228	UCAAGUA	ENSMUST00000147545.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chr18_+_86413077_86413094	0.07165911831045566	UCAAGUA	ENSMUST00000058829.4|Neto1|ENSMUSG00000050321.4|neuropilin (NRP) and tolloid (TLL)-like 1
mm39_v1_chr13_-_70785753_70785865	0.06999811632307422	UCAAGUA	ENSMUST00000043493.7|Ice1|ENSMUSG00000034525.8|interactor of little elongation complex ELL subunit 1
mm39_v1_chr14_-_122703089_122703089	0.06949273013044298	UCAAGUA	ENSMUST00000039118.7|Zic5|ENSMUSG00000041703.8|zinc finger protein of the cerebellum 5
mm39_v1_chr9_+_108539296_108539418	0.0691675317843923	UCAAGUA	ENSMUST00000035222.6|Slc25a20|ENSMUSG00000032602.7|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm39_v1_chr19_-_8796677_8796714	0.06892448268779239	UCAAGUA	ENSMUST00000096751.11|Ttc9c|ENSMUSG00000071660.11|tetratricopeptide repeat domain 9C
mm39_v1_chr9_-_21963306_21963322	0.06833831948454333	UCAAGUA	ENSMUST00000003501.9|Elavl3|ENSMUSG00000003410.9|ELAV like RNA binding protein 3	ENSMUST00000215901.2|Elavl3|ENSMUSG00000003410.9|ELAV like RNA binding protein 3
mm39_v1_chr4_+_59805829_59805914	0.06679012016373617	UCAAGUA	ENSMUST00000030080.7|Snx30|ENSMUSG00000028385.15|sorting nexin family member 30
mm39_v1_chrX_+_103526380_103526468	0.0664978152094639	UCAAGUA	ENSMUST00000087867.6|Uprt|ENSMUSG00000073016.4|uracil phosphoribosyltransferase
mm39_v1_chr4_+_126647563_126647628	0.06621032872147935	UCAAGUA	ENSMUST00000047431.11|AU040320|ENSMUSG00000028830.15|expressed sequence AU040320	ENSMUST00000102607.10|AU040320|ENSMUSG00000028830.15|expressed sequence AU040320	ENSMUST00000132660.2|AU040320|ENSMUSG00000028830.15|expressed sequence AU040320
mm39_v1_chr14_+_58308004_58308004	0.0660354648930445	UCAAGUA	ENSMUST00000165526.9|Fgf9|ENSMUSG00000021974.16|fibroblast growth factor 9
mm39_v1_chr4_+_83443777_83443851	0.06603349475663045	UCAAGUA	ENSMUST00000053414.13|Ccdc171|ENSMUSG00000052407.18|coiled-coil domain containing 171	ENSMUST00000231339.2|Ccdc171|ENSMUSG00000052407.18|coiled-coil domain containing 171	ENSMUST00000126429.8|Ccdc171|ENSMUSG00000052407.18|coiled-coil domain containing 171
mm39_v1_chr4_+_155685830_155685902	0.06590303102225432	UCAAGUA	ENSMUST00000105608.9|Slc35e2|ENSMUSG00000042202.16|solute carrier family 35, member E2
mm39_v1_chr4_-_55532453_55532485	0.0655561418226464	UCAAGUA	ENSMUST00000132746.2|Klf4|ENSMUSG00000003032.9|Kruppel-like factor 4 (gut)	ENSMUST00000107619.3|Klf4|ENSMUSG00000003032.9|Kruppel-like factor 4 (gut)
mm39_v1_chr13_-_34529157_34529257	0.06543858137023131	UCAAGUA	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr7_+_100757940_100757961	0.0640192943938971	UCAAGUA	ENSMUST00000032931.9|Fchsd2|ENSMUSG00000030691.16|FCH and double SH3 domains 2
mm39_v1_chr7_+_58878490_58878518	0.06346255109941203	UCAAGUA	ENSMUST00000202945.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000107537.5|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A
mm39_v1_chr4_+_32657105_32657167	0.06278635068283055	UCAAGUA	ENSMUST00000071642.11|Mdn1|ENSMUSG00000058006.13|midasin AAA ATPase 1	ENSMUST00000178134.2|Mdn1|ENSMUSG00000058006.13|midasin AAA ATPase 1
mm39_v1_chr5_-_110957933_110957979	0.06272719197003503	UCAAGUA	ENSMUST00000031490.11|Ulk1|ENSMUSG00000029512.12|unc-51 like kinase 1
mm39_v1_chr6_-_35516700_35516823	0.06267073041587691	UCAAGUA	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr11_-_61745843_61745899	0.062193854804939705	UCAAGUA	ENSMUST00000004920.4|Ulk2|ENSMUSG00000004798.15|unc-51 like kinase 2
mm39_v1_chr13_+_25240138_25240236	0.06172918764199737	UCAAGUA	ENSMUST00000069614.7|Dcdc2a|ENSMUSG00000035910.16|doublecortin domain containing 2a
mm39_v1_chr11_-_45835737_45835787	0.06138688530729955	UCAAGUA	ENSMUST00000129820.8|Lsm11|ENSMUSG00000044847.14|U7 snRNP-specific Sm-like protein LSM11
mm39_v1_chr9_-_95632387_95632421	0.06096836857755064	UCAAGUA	ENSMUST00000189137.7|Trpc1|ENSMUSG00000032839.14|transient receptor potential cation channel, subfamily C, member 1	ENSMUST00000053785.10|Trpc1|ENSMUSG00000032839.14|transient receptor potential cation channel, subfamily C, member 1
mm39_v1_chr3_+_101284391_101284421	0.0606963218613265	UCAAGUA	ENSMUST00000043983.11|Igsf3|ENSMUSG00000042035.12|immunoglobulin superfamily, member 3
mm39_v1_chr1_-_30912662_30912738	0.05986506855558129	UCAAGUA	ENSMUST00000186733.7|Phf3|ENSMUSG00000048874.16|PHD finger protein 3
mm39_v1_chrX_+_72386220_72386237	0.05977607328839088	UCAAGUA	ENSMUST00000114499.8|Zfp275|ENSMUSG00000031365.14|zinc finger protein 275	ENSMUST00000033731.4|Zfp275|ENSMUSG00000031365.14|zinc finger protein 275
mm39_v1_chr16_+_33005426_33005537	0.059740329147404604	UCAAGUA	ENSMUST00000232100.2|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11	ENSMUST00000232181.2|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11	ENSMUST00000039733.10|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11
mm39_v1_chr10_+_128212953_128213024	0.059717930968997156	UCAAGUA	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chr2_+_90770742_90770888	0.059572622322373585	UCAAGUA	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr7_+_4743114_4743205	0.059521724197730184	UCAAGUA	ENSMUST00000098853.9|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C	ENSMUST00000130215.8|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C	ENSMUST00000108582.10|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C	ENSMUST00000108583.9|Kmt5c|ENSMUSG00000059851.16|lysine methyltransferase 5C
mm39_v1_chr5_-_135423353_135423412	0.058130438244703396	UCAAGUA	ENSMUST00000111171.6|Pom121|ENSMUSG00000053293.10|nuclear pore membrane protein 121
mm39_v1_chr5_-_122917341_122917496	0.05800143015007965	UCAAGUA	ENSMUST00000198257.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000199599.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000196742.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000200109.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000111668.8|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm39_v1_chr13_+_74157538_74157572	0.05792699461257203	UCAAGUA	ENSMUST00000022057.9|Tppp|ENSMUSG00000021573.16|tubulin polymerization promoting protein
mm39_v1_chr13_+_46822992_46823022	0.057282062611408543	UCAAGUA	ENSMUST00000099547.4|Fam8a1|ENSMUSG00000069237.9|family with sequence similarity 8, member A1
mm39_v1_chr17_+_26934617_26934698	0.057234795555313155	UCAAGUA	ENSMUST00000062519.14|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000144221.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000142539.8|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000151681.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor
mm39_v1_chr1_+_131671751_131671767	0.05712809304469934	UCAAGUA	ENSMUST00000049027.10|Slc26a9|ENSMUSG00000042268.11|solute carrier family 26, member 9
mm39_v1_chr5_+_97145533_97145625	0.056992024359336486	UCAAGUA	ENSMUST00000112974.6|Bmp2k|ENSMUSG00000034663.14|BMP2 inducible kinase	ENSMUST00000035635.10|Bmp2k|ENSMUSG00000034663.14|BMP2 inducible kinase
mm39_v1_chr7_-_126294902_126294961	0.056461749928837325	UCAAGUA	ENSMUST00000144897.2|Slx1b|ENSMUSG00000059772.13|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
mm39_v1_chr10_+_34265969_34265985	0.05577125194936071	UCAAGUA	ENSMUST00000105511.2|Col10a1|ENSMUSG00000039462.5|collagen, type X, alpha 1
mm39_v1_chr2_-_63928339_63928367	0.05574425541847805	UCAAGUA	ENSMUST00000131615.9|Fign|ENSMUSG00000075324.14|fidgetin
mm39_v1_chr9_+_21458138_21458237	0.054723433662508016	UCAAGUA	ENSMUST00000034703.15|Carm1|ENSMUSG00000032185.16|coactivator-associated arginine methyltransferase 1	ENSMUST00000115395.10|Carm1|ENSMUSG00000032185.16|coactivator-associated arginine methyltransferase 1	ENSMUST00000115394.8|Carm1|ENSMUSG00000032185.16|coactivator-associated arginine methyltransferase 1
mm39_v1_chr1_-_52766615_52766632	0.054618617692271235	UCAAGUA	ENSMUST00000156876.8|Mfsd6|ENSMUSG00000041439.16|major facilitator superfamily domain containing 6	ENSMUST00000087701.4|Mfsd6|ENSMUSG00000041439.16|major facilitator superfamily domain containing 6
mm39_v1_chr10_-_121146940_121147094	0.05453730228567564	UCAAGUA	ENSMUST00000064107.7|Tbc1d30|ENSMUSG00000052302.7|TBC1 domain family, member 30
mm39_v1_chr5_+_118698689_118698804	0.05447568904300595	UCAAGUA	ENSMUST00000100816.8|Med13l|ENSMUSG00000018076.13|mediator complex subunit 13-like	ENSMUST00000201010.2|Med13l|ENSMUSG00000018076.13|mediator complex subunit 13-like
mm39_v1_chr2_+_10377237_10377309	0.051846757713806715	UCAAGUA	ENSMUST00000114864.9|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2	ENSMUST00000116594.9|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2	ENSMUST00000041105.7|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2
mm39_v1_chr10_-_71121083_71121094	0.051699490612043104	UCAAGUA	ENSMUST00000020085.7|Ube2d1|ENSMUSG00000019927.7|ubiquitin-conjugating enzyme E2D 1
mm39_v1_chr17_+_69463786_69463845	0.05166515327760651	UCAAGUA	ENSMUST00000112680.8|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000080208.7|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000225977.2|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3
mm39_v1_chr15_-_50753061_50753118	0.05107597710712893	UCAAGUA	ENSMUST00000165201.9|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1	ENSMUST00000184458.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr9_+_8544143_8544224	0.051018616923223674	UCAAGUA	ENSMUST00000050433.8|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6	ENSMUST00000217462.2|Trpc6|ENSMUSG00000031997.10|transient receptor potential cation channel, subfamily C, member 6
mm39_v1_chr4_-_149511059_149511206	0.04975029988070156	UCAAGUA	ENSMUST00000103212.10|Ube4b|ENSMUSG00000028960.21|ubiquitination factor E4B
mm39_v1_chr10_-_120312374_120312388	0.04903880655615951	UCAAGUA	ENSMUST00000072777.14|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2	ENSMUST00000159699.2|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2
mm39_v1_chr15_-_79287747_79287778	0.04855253475519487	UCAAGUA	ENSMUST00000074991.10|Tmem184b|ENSMUSG00000009035.16|transmembrane protein 184b
mm39_v1_chr1_+_60448703_60448811	0.04824693951556122	UCAAGUA	ENSMUST00000052332.15|Abi2|ENSMUSG00000026782.16|abl interactor 2
mm39_v1_chr6_-_38230890_38231089	0.04820312311852126	UCAAGUA	ENSMUST00000117556.8|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene	ENSMUST00000169256.5|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene
mm39_v1_chr6_-_136150076_136150146	0.04816265190641743	UCAAGUA	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr1_-_36978602_36978613	0.0479582165022131	UCAAGUA	ENSMUST00000027290.12|Tmem131|ENSMUSG00000026116.12|transmembrane protein 131
mm39_v1_chr16_+_42727926_42728047	0.04764214834097411	UCAAGUA	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr19_+_28967875_28967902	0.04718673452474619	UCAAGUA	ENSMUST00000224599.2|Cdc37l1|ENSMUSG00000024780.8|cell division cycle 37-like 1	ENSMUST00000050148.5|Cdc37l1|ENSMUSG00000024780.8|cell division cycle 37-like 1
mm39_v1_chr18_+_10725532_10725564	0.047168447300731844	UCAAGUA	ENSMUST00000052838.11|Mib1|ENSMUSG00000024294.15|mindbomb E3 ubiquitin protein ligase 1
mm39_v1_chr3_+_84500854_84500881	0.04648431681450143	UCAAGUA	ENSMUST00000062623.4|Tigd4|ENSMUSG00000047819.4|tigger transposable element derived 4
mm39_v1_chr6_+_91661034_91661058	0.04620409547830896	UCAAGUA	ENSMUST00000032185.9|Slc6a6|ENSMUSG00000030096.9|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm39_v1_chr11_+_97253221_97253377	0.04567113539654756	UCAAGUA	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chr7_+_133239272_133239288	0.04549915744906046	UCAAGUA	ENSMUST00000051169.13|Edrf1|ENSMUSG00000039990.17|erythroid differentiation regulatory factor 1
mm39_v1_chr9_+_102712063_102712190	0.04506577853718233	UCAAGUA	ENSMUST00000175883.8|Ryk|ENSMUSG00000032547.13|receptor-like tyrosine kinase	ENSMUST00000035142.8|Ryk|ENSMUSG00000032547.13|receptor-like tyrosine kinase
mm39_v1_chr16_-_58343789_58343883	0.044816439292228644	UCAAGUA	ENSMUST00000137035.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	ENSMUST00000149456.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr7_+_58307930_58308041	0.044284809890820294	UCAAGUA	ENSMUST00000168747.3|Atp10a|ENSMUSG00000025324.9|ATPase, class V, type 10A
mm39_v1_chr9_-_101128976_101129003	0.04403979244619959	UCAAGUA	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr6_+_134807097_134807146	0.0438407556871822	UCAAGUA	ENSMUST00000046303.12|Crebl2|ENSMUSG00000032652.14|cAMP responsive element binding protein-like 2
mm39_v1_chr5_+_135197137_135197227	0.043394307540741445	UCAAGUA	ENSMUST00000031692.12|Bcl7b|ENSMUSG00000029681.13|B cell CLL/lymphoma 7B
mm39_v1_chr5_-_64126194_64126247	0.043167366528978936	UCAAGUA	ENSMUST00000154169.4|Rell1|ENSMUSG00000047881.15|RELT-like 1
mm39_v1_chr2_+_134627987_134628090	0.043044430949862975	UCAAGUA	ENSMUST00000131552.5|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1	ENSMUST00000110116.8|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1
mm39_v1_chr2_+_79465696_79465729	0.04272897914768351	UCAAGUA	ENSMUST00000111785.9|Itprid2|ENSMUSG00000027007.17|ITPR interacting domain containing 2
mm39_v1_chr6_+_4505493_4505493	0.041745774814805646	UCAAGUA	ENSMUST00000031668.10|Col1a2|ENSMUSG00000029661.17|collagen, type I, alpha 2
mm39_v1_chr7_+_99876515_99876606	0.04174156584022113	UCAAGUA	ENSMUST00000084935.11|Pgm2l1|ENSMUSG00000030729.18|phosphoglucomutase 2-like 1
mm39_v1_chr5_+_134128543_134128635	0.04084273861494912	UCAAGUA	ENSMUST00000016088.9|Castor2|ENSMUSG00000015944.10|cytosolic arginine sensor for mTORC1 subunit 2
mm39_v1_chr5_+_146168020_146168195	0.040786379682150625	UCAAGUA	ENSMUST00000161181.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000161652.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000031640.15|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000159467.2|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8
mm39_v1_chr9_-_96993169_96993214	0.040610429801439384	UCAAGUA	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr16_+_91343936_91344002	0.040009545534688086	UCAAGUA	ENSMUST00000023687.9|Ifngr2|ENSMUSG00000022965.9|interferon gamma receptor 2
mm39_v1_chr4_+_150366028_150366103	0.039941913387600954	UCAAGUA	ENSMUST00000105682.9|Rere|ENSMUSG00000039852.18|arginine glutamic acid dipeptide (RE) repeats
mm39_v1_chrX_+_135723420_135723518	0.03979228065657782	UCAAGUA	ENSMUST00000033800.13|Plp1|ENSMUSG00000031425.16|proteolipid protein (myelin) 1
mm39_v1_chr2_-_20973692_20973768	0.03951209563236428	UCAAGUA	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr11_-_76400245_76400261	0.0389076103808243	UCAAGUA	ENSMUST00000094012.11|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr5_-_147013384_147013401	0.038752550429911804	UCAAGUA	ENSMUST00000016664.8|Lnx2|ENSMUSG00000016520.8|ligand of numb-protein X 2
mm39_v1_chr11_-_5331734_5331745	0.03842913016826399	UCAAGUA	ENSMUST00000172492.8|Znrf3|ENSMUSG00000041961.15|zinc and ring finger 3
mm39_v1_chr16_+_80997580_80997629	0.038334371994960766	UCAAGUA	ENSMUST00000037785.14|Ncam2|ENSMUSG00000022762.19|neural cell adhesion molecule 2	ENSMUST00000067602.5|Ncam2|ENSMUSG00000022762.19|neural cell adhesion molecule 2
mm39_v1_chr2_+_172994841_172994873	0.03813698113924249	UCAAGUA	ENSMUST00000029017.6|Pck1|ENSMUSG00000027513.12|phosphoenolpyruvate carboxykinase 1, cytosolic
mm39_v1_chr12_+_79075924_79076002	0.03752998293308971	UCAAGUA	ENSMUST00000039928.7|Plekhh1|ENSMUSG00000060716.8|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm39_v1_chr14_+_66872699_66872798	0.03687138633882584	UCAAGUA	ENSMUST00000159365.8|Adra1a|ENSMUSG00000045875.14|adrenergic receptor, alpha 1a	ENSMUST00000054661.8|Adra1a|ENSMUSG00000045875.14|adrenergic receptor, alpha 1a	ENSMUST00000225182.2|Adra1a|ENSMUSG00000045875.14|adrenergic receptor, alpha 1a	ENSMUST00000159068.2|Adra1a|ENSMUSG00000045875.14|adrenergic receptor, alpha 1a
mm39_v1_chr4_-_70453140_70453224	0.036685182115952876	UCAAGUA	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr2_+_128659997_128660061	0.036604915287435744	UCAAGUA	ENSMUST00000110325.8|Tmem87b|ENSMUSG00000014353.16|transmembrane protein 87B
mm39_v1_chr14_-_30850795_30850880	0.036027832011986366	UCAAGUA	ENSMUST00000049732.11|Smim4|ENSMUSG00000058351.12|small integral membrane protein 4	ENSMUST00000090205.5|Smim4|ENSMUSG00000058351.12|small integral membrane protein 4	ENSMUST00000064032.10|Smim4|ENSMUSG00000058351.12|small integral membrane protein 4
mm39_v1_chr9_+_72439496_72439553	0.03574528050391324	UCAAGUA	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr1_-_184731672_184731767	0.03566920295994625	UCAAGUA	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr5_+_89034666_89034684	0.035503483134778205	UCAAGUA	ENSMUST00000148750.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr18_+_32296126_32296249	0.03487713012471416	UCAAGUA	ENSMUST00000096575.5|Map3k2|ENSMUSG00000024383.10|mitogen-activated protein kinase kinase kinase 2
mm39_v1_chr8_-_112718888_112718934	0.03470533296911623	UCAAGUA	ENSMUST00000034427.12|Adat1|ENSMUSG00000031949.18|adenosine deaminase, tRNA-specific 1	ENSMUST00000139820.8|Adat1|ENSMUSG00000031949.18|adenosine deaminase, tRNA-specific 1
mm39_v1_chr4_+_102112189_102112200	0.03437123105270795	UCAAGUA	ENSMUST00000106908.9|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr13_-_111945499_111945552	0.03353905695621512	UCAAGUA	ENSMUST00000109267.9|Map3k1|ENSMUSG00000021754.18|mitogen-activated protein kinase kinase kinase 1
mm39_v1_chr7_-_122969064_122969144	0.03326094185554171	UCAAGUA	ENSMUST00000207010.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000167309.8|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000205262.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000106442.9|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000098060.5|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17
mm39_v1_chr4_+_148888877_148888897	0.032616916408626066	UCAAGUA	ENSMUST00000094464.10|Casz1|ENSMUSG00000028977.18|castor zinc finger 1	ENSMUST00000122222.8|Casz1|ENSMUSG00000028977.18|castor zinc finger 1
mm39_v1_chr2_-_25982160_25982189	0.032435629231941716	UCAAGUA	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chrX_-_107877909_107877987	0.0320936491583816	UCAAGUA	ENSMUST00000101283.4|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3	ENSMUST00000150434.8|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3
mm39_v1_chr11_-_78588194_78588205	0.03075672963882278	UCAAGUA	ENSMUST00000142739.8|Nlk|ENSMUSG00000017376.16|nemo like kinase
mm39_v1_chr2_-_63014622_63014681	0.03073912496677292	UCAAGUA	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr10_-_128237087_128237103	0.030712799520974284	UCAAGUA	ENSMUST00000042666.13|Slc39a5|ENSMUSG00000039878.14|solute carrier family 39 (metal ion transporter), member 5
mm39_v1_chr14_-_63482668_63482714	0.03034183383734163	UCAAGUA	ENSMUST00000118022.8|Gata4|ENSMUSG00000021944.16|GATA binding protein 4
mm39_v1_chr13_+_49495025_49495099	0.030194463895857115	UCAAGUA	ENSMUST00000048544.14|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110084.4|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2	ENSMUST00000110085.11|Bicd2|ENSMUSG00000037933.17|BICD cargo adaptor 2
mm39_v1_chr2_+_119505543_119505589	0.03014601576862562	UCAAGUA	ENSMUST00000028767.9|Rtf1|ENSMUSG00000027304.10|RTF1, Paf1/RNA polymerase II complex component
mm39_v1_chr5_+_121798623_121798696	0.030076008104668622	UCAAGUA	ENSMUST00000031414.15|Brap|ENSMUSG00000029458.15|BRCA1 associated protein
mm39_v1_chr1_+_138891447_138891539	0.029282051356352177	UCAAGUA	ENSMUST00000168527.8|Dennd1b|ENSMUSG00000056268.16|DENN/MADD domain containing 1B
mm39_v1_chr3_+_40594899_40594939	0.029120339214441137	UCAAGUA	ENSMUST00000091186.7|Intu|ENSMUSG00000060798.8|inturned planar cell polarity protein
mm39_v1_chr19_+_55730696_55730774	0.029114447027868057	UCAAGUA	ENSMUST00000153888.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000127233.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000061496.17|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111656.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box	ENSMUST00000111657.11|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr2_-_73722874_73722900	0.02894664624133985	UCAAGUA	ENSMUST00000136958.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112010.9|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000128531.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112017.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2
mm39_v1_chr4_-_53159885_53159900	0.028766532098878052	UCAAGUA	ENSMUST00000030010.4|Abca1|ENSMUSG00000015243.5|ATP-binding cassette, sub-family A (ABC1), member 1
mm39_v1_chr10_+_42736345_42736373	0.028339284901472556	UCAAGUA	ENSMUST00000063063.14|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr3_+_130904000_130904120	0.02805973569389765	UCAAGUA	ENSMUST00000029611.14|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1	ENSMUST00000106341.9|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1	ENSMUST00000066849.13|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1
mm39_v1_chr10_-_121312212_121312252	0.02785996116101734	UCAAGUA	ENSMUST00000026902.9|Rassf3|ENSMUSG00000025795.9|Ras association (RalGDS/AF-6) domain family member 3
mm39_v1_chr8_-_80126120_80126168	0.027333865028186622	UCAAGUA	ENSMUST00000066091.14|Smad1|ENSMUSG00000031681.17|SMAD family member 1	ENSMUST00000109885.8|Smad1|ENSMUSG00000031681.17|SMAD family member 1
mm39_v1_chr11_+_107438751_107438794	0.02700483870608314	UCAAGUA	ENSMUST00000100305.8|Helz|ENSMUSG00000020721.17|helicase with zinc finger domain	ENSMUST00000075012.8|Helz|ENSMUSG00000020721.17|helicase with zinc finger domain	ENSMUST00000106746.8|Helz|ENSMUSG00000020721.17|helicase with zinc finger domain
mm39_v1_chrX_+_84617624_84617756	0.02657853830674037	UCAAGUA	ENSMUST00000048250.10|Tab3|ENSMUSG00000035476.10|TGF-beta activated kinase 1/MAP3K7 binding protein 3	ENSMUST00000137438.2|Tab3|ENSMUSG00000035476.10|TGF-beta activated kinase 1/MAP3K7 binding protein 3	ENSMUST00000146063.2|Tab3|ENSMUSG00000035476.10|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm39_v1_chr11_-_78277384_78277433	0.026471521158143257	UCAAGUA	ENSMUST00000108294.2|Foxn1|ENSMUSG00000002057.5|forkhead box N1
mm39_v1_chr13_+_110039620_110039645	0.025963847810712898	UCAAGUA	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr7_-_25454126_25454176	0.025953911279131294	UCAAGUA	ENSMUST00000108401.3|Hnrnpul1|ENSMUSG00000040725.14|heterogeneous nuclear ribonucleoprotein U-like 1	ENSMUST00000043765.14|Hnrnpul1|ENSMUSG00000040725.14|heterogeneous nuclear ribonucleoprotein U-like 1
mm39_v1_chr11_+_16901370_16901418	0.02550110538186006	UCAAGUA	ENSMUST00000109635.2|Fbxo48|ENSMUSG00000044966.5|F-box protein 48	ENSMUST00000061327.2|Fbxo48|ENSMUSG00000044966.5|F-box protein 48
mm39_v1_chr9_-_44231526_44231587	0.02542000296398254	UCAAGUA	ENSMUST00000214602.2|C2cd2l|ENSMUSG00000032120.12|C2 calcium-dependent domain containing 2-like	ENSMUST00000065080.10|C2cd2l|ENSMUSG00000032120.12|C2 calcium-dependent domain containing 2-like
mm39_v1_chr7_+_110226857_110226873	0.025355700655847812	UCAAGUA	ENSMUST00000033054.10|Adm|ENSMUSG00000030790.16|adrenomedullin
mm39_v1_chr10_-_123032821_123032868	0.024513781642924913	UCAAGUA	ENSMUST00000219619.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15	ENSMUST00000020334.9|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr13_-_93328719_93328835	0.024470134202894765	UCAAGUA	ENSMUST00000048702.7|Tent2|ENSMUSG00000042167.7|terminal nucleotidyltransferase 2
mm39_v1_chr10_-_45346297_45346386	0.024126133392892355	UCAAGUA	ENSMUST00000079390.7|Lin28b|ENSMUSG00000063804.9|lin-28 homolog B (C. elegans)
mm39_v1_chr18_-_10610048_10610146	0.024102740344399097	UCAAGUA	ENSMUST00000115864.8|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1	ENSMUST00000145320.2|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1	ENSMUST00000097670.10|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1
mm39_v1_chr5_+_110283689_110283791	0.02382567539840191	UCAAGUA	ENSMUST00000200038.2|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000112519.9|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000198633.5|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000014812.13|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000199811.3|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains
mm39_v1_chr6_+_83302998_83303046	0.023689441416698407	UCAAGUA	ENSMUST00000055261.11|Mob1a|ENSMUSG00000043131.15|MOB kinase activator 1A
mm39_v1_chr16_-_62607105_62607161	0.023268960240678507	UCAAGUA	ENSMUST00000152553.2|Nsun3|ENSMUSG00000050312.13|NOL1/NOP2/Sun domain family member 3	ENSMUST00000063089.12|Nsun3|ENSMUSG00000050312.13|NOL1/NOP2/Sun domain family member 3
mm39_v1_chr9_-_66500404_66500424	0.023209946738263453	UCAAGUA	ENSMUST00000127569.8|Usp3|ENSMUSG00000032376.13|ubiquitin specific peptidase 3
mm39_v1_chr5_+_106024398_106024451	0.022825773364516223	UCAAGUA	ENSMUST00000150440.8|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326	ENSMUST00000031227.11|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326
mm39_v1_chr10_-_100323122_100323230	0.022353234572926855	UCAAGUA	ENSMUST00000128009.2|Tmtc3|ENSMUSG00000036676.15|transmembrane and tetratricopeptide repeat containing 3	ENSMUST00000134477.2|Tmtc3|ENSMUSG00000036676.15|transmembrane and tetratricopeptide repeat containing 3	ENSMUST00000099318.10|Tmtc3|ENSMUSG00000036676.15|transmembrane and tetratricopeptide repeat containing 3	ENSMUST00000058154.15|Tmtc3|ENSMUSG00000036676.15|transmembrane and tetratricopeptide repeat containing 3
mm39_v1_chr14_-_30348153_30348174	0.021739863745179406	UCAAGUA	ENSMUST00000112211.9|Prkcd|ENSMUSG00000021948.18|protein kinase C, delta	ENSMUST00000112210.11|Prkcd|ENSMUSG00000021948.18|protein kinase C, delta
mm39_v1_chr11_-_29464998_29465043	0.02127942796869127	UCAAGUA	ENSMUST00000133103.2|Prorsd1|ENSMUSG00000032673.6|prolyl-tRNA synthetase domain containing 1	ENSMUST00000039900.4|Prorsd1|ENSMUSG00000032673.6|prolyl-tRNA synthetase domain containing 1
mm39_v1_chr17_-_43187280_43187368	0.021099585481574434	UCAAGUA	ENSMUST00000024709.9|Cd2ap|ENSMUSG00000061665.8|CD2-associated protein	ENSMUST00000233476.2|Cd2ap|ENSMUSG00000061665.8|CD2-associated protein
mm39_v1_chr6_-_38853097_38853167	0.021065982791373068	UCAAGUA	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr2_-_102903680_102903858	0.02020420059679206	UCAAGUA	ENSMUST00000132449.8|Pdhx|ENSMUSG00000010914.11|pyruvate dehydrogenase complex, component X	ENSMUST00000111183.2|Pdhx|ENSMUSG00000010914.11|pyruvate dehydrogenase complex, component X	ENSMUST00000011058.9|Pdhx|ENSMUSG00000010914.11|pyruvate dehydrogenase complex, component X
mm39_v1_chr7_+_109617456_109617481	0.0201534001945591	UCAAGUA	ENSMUST00000084731.5|Ipo7|ENSMUSG00000066232.5|importin 7
mm39_v1_chr17_+_55752485_55752551	0.019952759015220606	UCAAGUA	ENSMUST00000025000.4|St6gal2|ENSMUSG00000024172.11|beta galactoside alpha 2,6 sialyltransferase 2
mm39_v1_chr16_+_32151056_32151086	0.01974685402954123	UCAAGUA	ENSMUST00000115151.5|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7	ENSMUST00000232137.2|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7
mm39_v1_chr14_+_28226697_28226720	0.01957154353975772	UCAAGUA	ENSMUST00000063465.12|Wnt5a|ENSMUSG00000021994.16|wingless-type MMTV integration site family, member 5A
mm39_v1_chr18_-_73836810_73836877	0.019535344197781693	UCAAGUA	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr4_-_58553311_58553357	0.019495855875774796	UCAAGUA	ENSMUST00000107571.8|Lpar1|ENSMUSG00000038668.15|lysophosphatidic acid receptor 1	ENSMUST00000055018.11|Lpar1|ENSMUSG00000038668.15|lysophosphatidic acid receptor 1
mm39_v1_chr15_-_53209513_53209565	0.019327252028077307	UCAAGUA	ENSMUST00000077273.9|Ext1|ENSMUSG00000061731.10|exostosin glycosyltransferase 1
mm39_v1_chr2_-_169973076_169973140	0.01915031642225922	UCAAGUA	ENSMUST00000063710.13|Zfp217|ENSMUSG00000052056.15|zinc finger protein 217
mm39_v1_chr13_-_100688949_100689006	0.019111454540903204	UCAAGUA	ENSMUST00000159515.2|Ocln|ENSMUSG00000021638.13|occludin	ENSMUST00000160859.8|Ocln|ENSMUSG00000021638.13|occludin	ENSMUST00000069756.11|Ocln|ENSMUSG00000021638.13|occludin
mm39_v1_chr5_+_77413282_77413396	0.018603203503141992	UCAAGUA	ENSMUST00000080359.12|Rest|ENSMUSG00000029249.16|RE1-silencing transcription factor
mm39_v1_chr7_-_133826817_133826865	0.018554199910522373	UCAAGUA	ENSMUST00000067680.11|Adam12|ENSMUSG00000054555.12|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm39_v1_chr18_+_36414122_36414204	0.0183123065866897	UCAAGUA	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chrX_+_18028814_18028897	0.017821018367310527	UCAAGUA	ENSMUST00000044484.13|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A	ENSMUST00000052368.9|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A
mm39_v1_chr19_+_18690556_18690576	0.017376404379719	UCAAGUA	ENSMUST00000062753.3|D030056L22Rik|ENSMUSG00000047044.8|RIKEN cDNA D030056L22 gene
mm39_v1_chr15_-_9140460_9140526	0.01700442536797312	UCAAGUA	ENSMUST00000110585.10|Skp2|ENSMUSG00000054115.13|S-phase kinase-associated protein 2
mm39_v1_chr16_-_45229238_45229416	0.016651856557911626	UCAAGUA	ENSMUST00000023341.15|Cd200|ENSMUSG00000022661.15|CD200 antigen	ENSMUST00000163230.8|Cd200|ENSMUSG00000022661.15|CD200 antigen
mm39_v1_chr5_+_33978035_33978173	0.01664245198233022	UCAAGUA	ENSMUST00000075812.11|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2	ENSMUST00000114397.9|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2	ENSMUST00000155880.8|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2
mm39_v1_chr5_+_111027654_111027708	0.01650664635303954	UCAAGUA	ENSMUST00000040111.10|Ttc28|ENSMUSG00000033209.18|tetratricopeptide repeat domain 28	ENSMUST00000156290.9|Ttc28|ENSMUSG00000033209.18|tetratricopeptide repeat domain 28
mm39_v1_chr12_+_84498196_84498292	0.016355439736489206	UCAAGUA	ENSMUST00000137170.3|Lin52|ENSMUSG00000085793.3|lin-52 homolog (C. elegans)
mm39_v1_chr2_+_26205525_26205614	0.0161888085868967	UCAAGUA	ENSMUST00000066936.9|Gpsm1|ENSMUSG00000026930.16|G-protein signalling modulator 1 (AGS3-like, C. elegans)	ENSMUST00000078616.12|Gpsm1|ENSMUSG00000026930.16|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm39_v1_chr8_-_120828211_120828246	0.016143865666087602	UCAAGUA	ENSMUST00000034280.9|Zdhhc7|ENSMUSG00000031823.15|zinc finger, DHHC domain containing 7
mm39_v1_chr17_-_64638887_64638951	0.016020716579559623	UCAAGUA	ENSMUST00000172818.8|Pja2|ENSMUSG00000024083.17|praja ring finger ubiquitin ligase 2
mm39_v1_chr11_-_60804601_60804642	0.015973983518814336	UCAAGUA	ENSMUST00000019075.4|Natd1|ENSMUSG00000018931.4|N-acetyltransferase domain containing 1
mm39_v1_chr4_-_3574844_3574853	0.01573957203273275	UCAAGUA	ENSMUST00000029891.12|Tmem68|ENSMUSG00000028232.14|transmembrane protein 68
mm39_v1_chr11_+_105480796_105480857	0.01562746463809028	UCAAGUA	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr3_-_103698853_103698879	0.015268816985983582	UCAAGUA	ENSMUST00000118317.8|Hipk1|ENSMUSG00000008730.18|homeodomain interacting protein kinase 1
mm39_v1_chr4_+_131649001_131649082	0.014864516256510009	UCAAGUA	ENSMUST00000094666.4|Tmem200b|ENSMUSG00000070720.5|transmembrane protein 200B
mm39_v1_chr10_-_56104732_56104791	0.014702114620313365	UCAAGUA	ENSMUST00000099739.5|Tbc1d32|ENSMUSG00000038122.10|TBC1 domain family, member 32
mm39_v1_chr10_+_71183571_71183593	0.01468205777798504	UCAAGUA	ENSMUST00000079252.13|Ipmk|ENSMUSG00000060733.14|inositol polyphosphate multikinase
mm39_v1_chr19_+_40819682_40819757	0.014658075349329076	UCAAGUA	ENSMUST00000025983.13|Ccnj|ENSMUSG00000025010.15|cyclin J	ENSMUST00000119316.2|Ccnj|ENSMUSG00000025010.15|cyclin J
mm39_v1_chr16_+_58548273_58548426	0.014087242702653806	UCAAGUA	ENSMUST00000023426.12|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1	ENSMUST00000162057.8|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1	ENSMUST00000162191.2|Cldnd1|ENSMUSG00000022744.13|claudin domain containing 1
mm39_v1_chr14_-_73563212_73563276	0.01381610322308509	UCAAGUA	ENSMUST00000022701.7|Rb1|ENSMUSG00000022105.7|RB transcriptional corepressor 1
mm39_v1_chr4_-_94491473_94491490	0.01322087854399201	UCAAGUA	ENSMUST00000107107.9|Plaa|ENSMUSG00000028577.14|phospholipase A2, activating protein
mm39_v1_chr16_-_97763780_97763836	0.013167990075842878	UCAAGUA	ENSMUST00000232187.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000232165.2|C2cd2|ENSMUSG00000045975.9|C2 calcium-dependent domain containing 2	ENSMUST00000231263.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000052089.9|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000063605.15|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000113734.9|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000231560.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21
mm39_v1_chr11_+_43572825_43572918	0.012964382954290048	UCAAGUA	ENSMUST00000061070.6|Pwwp2a|ENSMUSG00000044950.8|PWWP domain containing 2A	ENSMUST00000094294.5|Pwwp2a|ENSMUSG00000044950.8|PWWP domain containing 2A
mm39_v1_chr8_+_72662437_72662501	0.012564051845573245	UCAAGUA	ENSMUST00000110002.8|Zfp882|ENSMUSG00000089857.10|zinc finger protein 882	ENSMUST00000131544.8|Zfp617|ENSMUSG00000066880.16|zinc finger protein 617	ENSMUST00000125802.8|Zfp882|ENSMUSG00000089857.10|zinc finger protein 882
mm39_v1_chr7_-_116042674_116042698	0.01249154812923801	UCAAGUA	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr12_+_52746158_52746186	0.012078737647335514	UCAAGUA	ENSMUST00000095737.5|Akap6|ENSMUSG00000061603.9|A kinase (PRKA) anchor protein 6
mm39_v1_chr1_+_165123358_165123358	0.011909307481479338	UCAAGUA	ENSMUST00000178700.8|Gpr161|ENSMUSG00000040836.16|G protein-coupled receptor 161
mm39_v1_chr8_-_26275182_26275315	0.011297912864416362	UCAAGUA	ENSMUST00000038498.10|Bag4|ENSMUSG00000037316.10|BCL2-associated athanogene 4
mm39_v1_chr12_+_81906738_81906814	0.011223449821456498	UCAAGUA	ENSMUST00000221721.2|Pcnx|ENSMUSG00000021140.10|pecanex homolog	ENSMUST00000021567.6|Pcnx|ENSMUSG00000021140.10|pecanex homolog
mm39_v1_chr4_+_132001680_132001744	0.010565726729457667	UCAAGUA	ENSMUST00000030731.11|Taf12|ENSMUSG00000028899.12|TATA-box binding protein associated factor 12	ENSMUST00000105963.2|Taf12|ENSMUSG00000028899.12|TATA-box binding protein associated factor 12
mm39_v1_chr11_+_110956980_110957000	0.01036186234720201	UCAAGUA	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr2_+_119181703_119181716	0.010242383180558003	UCAAGUA	ENSMUST00000028780.4|Chac1|ENSMUSG00000027313.4|ChaC, cation transport regulator 1
mm39_v1_chr8_+_95328558_95328631	0.009917422419622334	UCAAGUA	ENSMUST00000060389.10|Rspry1|ENSMUSG00000050079.11|ring finger and SPRY domain containing 1	ENSMUST00000212729.2|Rspry1|ENSMUSG00000050079.11|ring finger and SPRY domain containing 1	ENSMUST00000121101.2|Rspry1|ENSMUSG00000050079.11|ring finger and SPRY domain containing 1
mm39_v1_chr11_+_43419586_43419623	0.009731963933927465	UCAAGUA	ENSMUST00000050574.7|Ccnjl|ENSMUSG00000044707.8|cyclin J-like
mm39_v1_chr7_-_105049197_105049261	0.009658896257444012	UCAAGUA	ENSMUST00000048079.14|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000118726.8|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000074686.10|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000122327.7|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000179474.9|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2
mm39_v1_chr2_+_179761093_179761203	0.009562667530015435	UCAAGUA	ENSMUST00000040668.9|Osbpl2|ENSMUSG00000039050.9|oxysterol binding protein-like 2
mm39_v1_chr9_+_78020554_78020659	0.009273166040418687	UCAAGUA	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr1_-_88629843_88629943	0.009218846229329988	UCAAGUA	ENSMUST00000159814.2|Arl4c|ENSMUSG00000049866.13|ADP-ribosylation factor-like 4C
mm39_v1_chr2_-_37537224_37537297	0.00901600791971197	UCAAGUA	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr3_+_16237371_16237447	0.008831680972637963	UCAAGUA	ENSMUST00000108345.9|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000191774.6|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000108346.5|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3
mm39_v1_chr1_-_97589675_97589799	0.008678993830062303	UCAAGUA	ENSMUST00000053033.14|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator	ENSMUST00000149927.2|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator
mm39_v1_chr19_-_59064501_59064532	0.008508738786501106	UCAAGUA	ENSMUST00000163821.3|Shtn1|ENSMUSG00000041362.18|shootin 1	ENSMUST00000047511.15|Shtn1|ENSMUSG00000041362.18|shootin 1
mm39_v1_chr3_-_121056944_121056997	0.008374514166747626	UCAAGUA	ENSMUST00000128909.8|Tlcd4|ENSMUSG00000028132.16|TLC domain containing 4	ENSMUST00000029777.14|Tlcd4|ENSMUSG00000028132.16|TLC domain containing 4
mm39_v1_chr13_-_46881388_46881482	0.008241994460580698	UCAAGUA	ENSMUST00000021803.10|Nup153|ENSMUSG00000021374.11|nucleoporin 153
mm39_v1_chr14_-_36690726_36690751	0.008042534327105257	UCAAGUA	ENSMUST00000090024.11|Ccser2|ENSMUSG00000058690.15|coiled-coil serine rich 2
mm39_v1_chr15_+_66449385_66449487	0.007636168217740867	UCAAGUA	ENSMUST00000230882.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000048188.10|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000230948.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1	ENSMUST00000229160.2|Phf20l1|ENSMUSG00000072501.6|PHD finger protein 20-like 1
mm39_v1_chr18_-_80194682_80194732	0.00723686775690353	UCAAGUA	ENSMUST00000066743.11|Adnp2|ENSMUSG00000053950.11|ADNP homeobox 2
mm39_v1_chr3_+_75464837_75464869	0.006870972691194218	UCAAGUA	ENSMUST00000161776.8|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1	ENSMUST00000029423.9|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm39_v1_chr8_+_35274440_35274464	0.006654140033200145	UCAAGUA	ENSMUST00000033930.5|Dusp4|ENSMUSG00000031530.7|dual specificity phosphatase 4
mm39_v1_chr19_+_43678109_43678133	0.006469346278693129	UCAAGUA	ENSMUST00000081079.6|Entpd7|ENSMUSG00000025192.14|ectonucleoside triphosphate diphosphohydrolase 7
mm39_v1_chr10_+_84938452_84938491	0.006454220544064699	UCAAGUA	ENSMUST00000095383.6|Tmem263|ENSMUSG00000060935.7|transmembrane protein 263
mm39_v1_chr3_+_27425500_27425500	0.006305150835469308	UCAAGUA	ENSMUST00000057186.2|Ghsr|ENSMUSG00000051136.2|growth hormone secretagogue receptor
mm39_v1_chr9_-_62888156_62888184	0.005704173253212582	UCAAGUA	ENSMUST00000098651.6|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1	ENSMUST00000214830.2|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1
mm39_v1_chr15_-_8473918_8473991	0.0056524895855435105	UCAAGUA	ENSMUST00000052965.8|Nipbl|ENSMUSG00000022141.8|NIPBL cohesin loading factor
mm39_v1_chr1_+_86510614_86510660	0.005169351677485545	UCAAGUA	ENSMUST00000121534.8|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B	ENSMUST00000149542.2|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B
mm39_v1_chr13_-_99653045_99653092	0.005161829508721337	UCAAGUA	ENSMUST00000064762.6|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr17_-_83939316_83939335	0.0051615608670412955	UCAAGUA	ENSMUST00000234613.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3	ENSMUST00000051482.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3
mm39_v1_chrX_+_5959507_5959507	0.004897088526635434	UCAAGUA	ENSMUST00000103007.4|Nudt11|ENSMUSG00000073295.5|nudix (nucleoside diphosphate linked moiety X)-type motif 11
mm39_v1_chr14_+_34395845_34395890	0.0047367019260638335	UCAAGUA	ENSMUST00000048263.14|Wapl|ENSMUSG00000041408.19|WAPL cohesin release factor
mm39_v1_chr1_-_59276252_59276416	0.0047294355749124065	UCAAGUA	ENSMUST00000163058.2|Als2|ENSMUSG00000026024.15|alsin Rho guanine nucleotide exchange factor	ENSMUST00000160945.2|Als2|ENSMUSG00000026024.15|alsin Rho guanine nucleotide exchange factor	ENSMUST00000027178.13|Als2|ENSMUSG00000026024.15|alsin Rho guanine nucleotide exchange factor
mm39_v1_chr14_-_8457069_8457272	0.004508288056746442	UCAAGUA	ENSMUST00000022257.4|Atxn7|ENSMUSG00000021738.6|ataxin 7
mm39_v1_chr11_-_70910058_70910129	0.004185524017978795	UCAAGUA	ENSMUST00000108523.10|Derl2|ENSMUSG00000018442.14|Der1-like domain family, member 2	ENSMUST00000143850.8|Derl2|ENSMUSG00000018442.14|Der1-like domain family, member 2
mm39_v1_chr2_-_136958544_136958564	0.004060239687050311	UCAAGUA	ENSMUST00000028735.8|Jag1|ENSMUSG00000027276.8|jagged 1
mm39_v1_chr1_-_172125555_172125631	0.004021152919394697	UCAAGUA	ENSMUST00000085913.11|Atp1a2|ENSMUSG00000007097.15|ATPase, Na+/K+ transporting, alpha 2 polypeptide	ENSMUST00000097464.4|Atp1a2|ENSMUSG00000007097.15|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm39_v1_chr16_+_13489722_13489803	0.003938689410967534	UCAAGUA	ENSMUST00000023365.13|Bfar|ENSMUSG00000022684.16|bifunctional apoptosis regulator
mm39_v1_chr19_-_37184692_37184907	0.0039168366329161	UCAAGUA	ENSMUST00000132580.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000079754.11|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000136286.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126188.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126781.2|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3
mm39_v1_chr15_-_56557920_56557950	0.003567177788538143	UCAAGUA	ENSMUST00000050544.8|Has2|ENSMUSG00000022367.8|hyaluronan synthase 2
mm39_v1_chr4_-_126096551_126096554	0.0034468995375027925	UCAAGUA	ENSMUST00000080919.12|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3
mm39_v1_chr4_+_116578117_116578201	0.003439181935337176	UCAAGUA	ENSMUST00000045542.13|Tesk2|ENSMUSG00000033985.18|testis-specific kinase 2	ENSMUST00000106459.8|Tesk2|ENSMUSG00000033985.18|testis-specific kinase 2
mm39_v1_chr5_-_29683468_29683595	0.002960383031459036	UCAAGUA	ENSMUST00000165512.4|Mnx1|ENSMUSG00000001566.10|motor neuron and pancreas homeobox 1	ENSMUST00000001608.8|Mnx1|ENSMUSG00000001566.10|motor neuron and pancreas homeobox 1
mm39_v1_chr15_-_103275190_103275225	0.002865769738590341	UCAAGUA	ENSMUST00000023128.8|Itga5|ENSMUSG00000000555.9|integrin alpha 5 (fibronectin receptor alpha)
mm39_v1_chr18_+_65022035_65022105	0.0028570231165489022	UCAAGUA	ENSMUST00000224385.3|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like	ENSMUST00000163516.9|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm39_v1_chr12_-_14202041_14202070	0.0027297154972223824	UCAAGUA	ENSMUST00000020926.8|Lratd1|ENSMUSG00000020607.8|LRAT domain containing 1
mm39_v1_chr5_+_124767114_124767162	0.0024929486424524858	UCAAGUA	ENSMUST00000037865.13|Atp6v0a2|ENSMUSG00000038023.13|ATPase, H+ transporting, lysosomal V0 subunit A2
mm39_v1_chr1_+_164076592_164076620	0.0024076851550888676	UCAAGUA	ENSMUST00000044021.12|Slc19a2|ENSMUSG00000040918.13|solute carrier family 19 (thiamine transporter), member 2
mm39_v1_chrX_+_81992467_81992521	0.00225132068139237	UCAAGUA	ENSMUST00000114000.8|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy
mm39_v1_chr13_+_44884740_44884752	0.001858083985350953	UCAAGUA	ENSMUST00000173246.8|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr14_-_24295988_24295988	0.0016327101056408857	UCAAGUA	ENSMUST00000073687.13|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5	ENSMUST00000090398.11|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5
mm39_v1_chr12_-_41536430_41536430	0.001402670082504564	UCAAGUA	ENSMUST00000043884.6|Lrrn3|ENSMUSG00000036295.6|leucine rich repeat protein 3, neuronal
mm39_v1_chr14_-_47059694_47059743	0.0013397790481206458	UCAAGUA	ENSMUST00000111817.8|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta	ENSMUST00000079314.12|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta
mm39_v1_chr8_+_61085890_61085952	0.0013355112530174336	UCAAGUA	ENSMUST00000160719.8|Mfap3l|ENSMUSG00000031647.11|microfibrillar-associated protein 3-like
mm39_v1_chr13_+_104424359_104424432	0.0012462281408704738	UCAAGUA	ENSMUST00000065766.7|Adamts6|ENSMUSG00000046169.11|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm39_v1_chr16_+_19916292_19916346	0.0012258094931536909	UCAAGUA	ENSMUST00000023509.5|Klhl24|ENSMUSG00000062901.4|kelch-like 24	ENSMUST00000232088.2|Klhl24|ENSMUSG00000062901.4|kelch-like 24	ENSMUST00000231842.2|Klhl24|ENSMUSG00000062901.4|kelch-like 24
mm39_v1_chr7_+_78922947_78922973	0.0008842406930606963	UCAAGUA	ENSMUST00000037315.13|Abhd2|ENSMUSG00000039202.13|abhydrolase domain containing 2
mm39_v1_chr2_+_124452493_124452534	0.0008779559228661523	UCAAGUA	ENSMUST00000103239.10|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	ENSMUST00000103240.9|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm39_v1_chr4_+_109137462_109137513	0.0002007763721437586	UCAAGUA	ENSMUST00000102729.10|Eps15|ENSMUSG00000028552.14|epidermal growth factor receptor pathway substrate 15
