mm39_v1_chr11_+_34264757_34264822	0.8011583241873832	UGUGCUU	ENSMUST00000165963.9|Insyn2b|ENSMUSG00000069911.12|inhibitory synaptic factor family member 2B	ENSMUST00000093192.4|Insyn2b|ENSMUSG00000069911.12|inhibitory synaptic factor family member 2B
mm39_v1_chr3_+_14951478_14951488	0.6212108700148802	UGUGCUU	ENSMUST00000029078.9|Car2|ENSMUSG00000027562.13|carbonic anhydrase 2
mm39_v1_chr12_-_80307110_80307145	0.6058518899245089	UGUGCUU	ENSMUST00000021554.16|Actn1|ENSMUSG00000015143.16|actinin, alpha 1
mm39_v1_chr9_-_43017249_43017322	0.5303890800189899	UGUGCUU	ENSMUST00000165665.9|Arhgef12|ENSMUSG00000059495.15|Rho guanine nucleotide exchange factor (GEF) 12
mm39_v1_chr15_-_90563510_90563635	0.48791844365737835	UGUGCUU	ENSMUST00000014777.9|Cpne8|ENSMUSG00000052560.16|copine VIII	ENSMUST00000064391.12|Cpne8|ENSMUSG00000052560.16|copine VIII
mm39_v1_chr10_-_40018243_40018256	0.43655760737489474	UGUGCUU	ENSMUST00000092566.8|Slc16a10|ENSMUSG00000019838.12|solute carrier family 16 (monocarboxylic acid transporters), member 10	ENSMUST00000213488.2|Slc16a10|ENSMUSG00000019838.12|solute carrier family 16 (monocarboxylic acid transporters), member 10
mm39_v1_chr8_-_107064615_107064640	0.4043611348320631	UGUGCUU	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chr17_+_81251997_81252073	0.4030686426470397	UGUGCUU	ENSMUST00000025092.5|Tmem178|ENSMUSG00000024245.5|transmembrane protein 178
mm39_v1_chr4_+_119671688_119671723	0.38903379302700225	UGUGCUU	ENSMUST00000106307.9|Hivep3|ENSMUSG00000028634.18|human immunodeficiency virus type I enhancer binding protein 3
mm39_v1_chr5_+_146321757_146321804	0.38554328324535997	UGUGCUU	ENSMUST00000016143.9|Wasf3|ENSMUSG00000029636.12|WASP family, member 3
mm39_v1_chr15_+_30172716_30172748	0.37441256816725593	UGUGCUU	ENSMUST00000081728.7|Ctnnd2|ENSMUSG00000022240.11|catenin (cadherin associated protein), delta 2
mm39_v1_chrX_+_71006577_71006619	0.3665700335656686	UGUGCUU	ENSMUST00000048790.7|Prrg3|ENSMUSG00000033361.14|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm39_v1_chr4_-_136563154_136563299	0.3579301539635302	UGUGCUU	ENSMUST00000105846.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000059287.14|Ephb2|ENSMUSG00000028664.15|Eph receptor B2	ENSMUST00000105845.9|Ephb2|ENSMUSG00000028664.15|Eph receptor B2
mm39_v1_chr5_-_129030367_129030550	0.3578075140919893	UGUGCUU	ENSMUST00000111346.6|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2	ENSMUST00000200470.5|Rimbp2|ENSMUSG00000029420.15|RIMS binding protein 2
mm39_v1_chr6_-_57802131_57802151	0.3555609487323046	UGUGCUU	ENSMUST00000204878.3|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1	ENSMUST00000145608.7|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1	ENSMUST00000203212.3|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1	ENSMUST00000114297.5|Vopp1|ENSMUSG00000037788.15|vesicular, overexpressed in cancer, prosurvival protein 1
mm39_v1_chr2_-_162502994_162503067	0.3510636478837853	UGUGCUU	ENSMUST00000109442.8|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109445.9|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109443.8|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T	ENSMUST00000109441.2|Ptprt|ENSMUSG00000053141.17|protein tyrosine phosphatase, receptor type, T
mm39_v1_chr7_-_136916123_136916174	0.35042667833276275	UGUGCUU	ENSMUST00000106118.10|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000168203.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000169486.9|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000033378.13|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chr7_-_127423641_127423751	0.3482728598569239	UGUGCUU	ENSMUST00000106267.5|Stx1b|ENSMUSG00000030806.7|syntaxin 1B
mm39_v1_chr9_+_43655230_43655318	0.3413736906566779	UGUGCUU	ENSMUST00000034510.9|Nectin1|ENSMUSG00000032012.10|nectin cell adhesion molecule 1
mm39_v1_chr15_-_53765869_53765926	0.3340198877399029	UGUGCUU	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr2_-_131871725_131871921	0.3246984337544723	UGUGCUU	ENSMUST00000028814.15|Rassf2|ENSMUSG00000027339.16|Ras association (RalGDS/AF-6) domain family member 2
mm39_v1_chr17_-_30107544_30107682	0.30578954276030074	UGUGCUU	ENSMUST00000171691.9|Mdga1|ENSMUSG00000043557.17|MAM domain containing glycosylphosphatidylinositol anchor 1
mm39_v1_chr16_+_14523696_14523722	0.3006343574574607	UGUGCUU	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr7_+_99030621_99030781	0.29896198122446843	UGUGCUU	ENSMUST00000037528.10|Gdpd5|ENSMUSG00000035314.11|glycerophosphodiester phosphodiesterase domain containing 5
mm39_v1_chr8_+_36054919_36054981	0.2890639656579895	UGUGCUU	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr11_+_98828495_98828559	0.28741633254582527	UGUGCUU	ENSMUST00000107475.9|Rara|ENSMUSG00000037992.17|retinoic acid receptor, alpha	ENSMUST00000068133.10|Rara|ENSMUSG00000037992.17|retinoic acid receptor, alpha
mm39_v1_chr17_+_87270504_87270537	0.2858812251900974	UGUGCUU	ENSMUST00000024956.15|Rhoq|ENSMUSG00000024143.16|ras homolog family member Q
mm39_v1_chr10_-_37014859_37014933	0.28202885743219924	UGUGCUU	ENSMUST00000092584.6|Marcks|ENSMUSG00000069662.6|myristoylated alanine rich protein kinase C substrate
mm39_v1_chr8_-_106553822_106553982	0.2810058507416846	UGUGCUU	ENSMUST00000239468.2|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10	ENSMUST00000041400.6|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10
mm39_v1_chr8_+_40964818_40964829	0.2803923139970745	UGUGCUU	ENSMUST00000098817.4|Vps37a|ENSMUSG00000031600.12|vacuolar protein sorting 37A
mm39_v1_chr16_-_18052937_18053048	0.2798791737521847	UGUGCUU	ENSMUST00000076957.7|Zdhhc8|ENSMUSG00000060166.7|zinc finger, DHHC domain containing 8
mm39_v1_chr3_-_9898713_9898739	0.2700762143059202	UGUGCUU	ENSMUST00000161949.8|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr4_-_3938352_3938401	0.26603323394590966	UGUGCUU	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr2_+_92745426_92745460	0.25488158136874006	UGUGCUU	ENSMUST00000028648.3|Syt13|ENSMUSG00000027220.3|synaptotagmin XIII
mm39_v1_chr19_-_31742427_31742480	0.2520630625334436	UGUGCUU	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr1_+_136059101_136059142	0.24531732406656484	UGUGCUU	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr9_-_70564403_70564470	0.24076824229150048	UGUGCUU	ENSMUST00000213380.2|Mindy2|ENSMUSG00000042444.11|MINDY lysine 48 deubiquitinase 2	ENSMUST00000049031.6|Mindy2|ENSMUSG00000042444.11|MINDY lysine 48 deubiquitinase 2
mm39_v1_chrX_+_7688528_7688528	0.2405956262711656	UGUGCUU	ENSMUST00000009875.5|Kcnd1|ENSMUSG00000009731.5|potassium voltage-gated channel, Shal-related family, member 1
mm39_v1_chr9_-_123680927_123680974	0.23759550797841092	UGUGCUU	ENSMUST00000184082.3|Fyco1|ENSMUSG00000025241.17|FYVE and coiled-coil domain containing 1	ENSMUST00000167595.9|Fyco1|ENSMUSG00000025241.17|FYVE and coiled-coil domain containing 1
mm39_v1_chr8_+_67150055_67150080	0.22025177542078608	UGUGCUU	ENSMUST00000039303.7|Npy1r|ENSMUSG00000036437.7|neuropeptide Y receptor Y1
mm39_v1_chr17_-_25155868_25155976	0.21807381737935883	UGUGCUU	ENSMUST00000115228.9|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000117509.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121723.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000119115.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000121787.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000088345.12|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000120035.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000115229.10|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3	ENSMUST00000178969.8|Mapk8ip3|ENSMUSG00000024163.18|mitogen-activated protein kinase 8 interacting protein 3
mm39_v1_chr3_+_31149201_31149244	0.216479654797874	UGUGCUU	ENSMUST00000118470.8|Skil|ENSMUSG00000027660.17|SKI-like	ENSMUST00000029194.12|Skil|ENSMUSG00000027660.17|SKI-like	ENSMUST00000123532.2|Skil|ENSMUSG00000027660.17|SKI-like
mm39_v1_chr5_-_113163339_113163434	0.2139328245064571	UGUGCUU	ENSMUST00000197776.2|Grk3|ENSMUSG00000042249.12|G protein-coupled receptor kinase 3	ENSMUST00000065167.9|Grk3|ENSMUSG00000042249.12|G protein-coupled receptor kinase 3
mm39_v1_chr7_+_108610032_108610042	0.21077904171392128	UGUGCUU	ENSMUST00000033341.12|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr2_+_3285240_3285257	0.20320328526903084	UGUGCUU	ENSMUST00000081932.13|Nmt2|ENSMUSG00000026643.17|N-myristoyltransferase 2
mm39_v1_chr3_-_19365431_19365486	0.20088788523669043	UGUGCUU	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr2_-_39080701_39080762	0.1980000378153696	UGUGCUU	ENSMUST00000142872.2|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion	ENSMUST00000038874.12|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion
mm39_v1_chr3_+_131791042_131791060	0.19640934451328101	UGUGCUU	ENSMUST00000029665.7|Dkk2|ENSMUSG00000028031.7|dickkopf WNT signaling pathway inhibitor 2
mm39_v1_chr10_-_10958031_10958116	0.18595201539067563	UGUGCUU	ENSMUST00000105561.9|Grm1|ENSMUSG00000019828.14|glutamate receptor, metabotropic 1	ENSMUST00000044306.13|Grm1|ENSMUSG00000019828.14|glutamate receptor, metabotropic 1
mm39_v1_chr1_-_72576089_72576158	0.18494808137284366	UGUGCUU	ENSMUST00000047786.6|Marchf4|ENSMUSG00000039372.6|membrane associated ring-CH-type finger 4
mm39_v1_chr13_+_42205491_42205548	0.1839553781768	UGUGCUU	ENSMUST00000060148.6|Hivep1|ENSMUSG00000021366.9|human immunodeficiency virus type I enhancer binding protein 1
mm39_v1_chr17_-_88105422_88105476	0.1837661096186562	UGUGCUU	ENSMUST00000055221.9|Kcnk12|ENSMUSG00000050138.9|potassium channel, subfamily K, member 12
mm39_v1_chr3_-_107425316_107425339	0.18343665855333455	UGUGCUU	ENSMUST00000169449.8|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17	ENSMUST00000029499.15|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17
mm39_v1_chr18_-_16942289_16942384	0.1818365181376065	UGUGCUU	ENSMUST00000025166.14|Cdh2|ENSMUSG00000024304.15|cadherin 2
mm39_v1_chr4_-_126323291_126323349	0.18082109545872013	UGUGCUU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr14_+_25459630_25459651	0.1789828666878	UGUGCUU	ENSMUST00000162645.8|Zmiz1|ENSMUSG00000007817.16|zinc finger, MIZ-type containing 1
mm39_v1_chr15_-_103148239_103148297	0.1728625141844102	UGUGCUU	ENSMUST00000118152.8|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr9_-_44710480_44710604	0.17111834099922876	UGUGCUU	ENSMUST00000214833.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000213972.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000214431.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000213363.2|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000114705.9|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25	ENSMUST00000002100.8|Tmem25|ENSMUSG00000002032.18|transmembrane protein 25
mm39_v1_chr7_+_99184645_99184709	0.17109946154469996	UGUGCUU	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr4_+_125384481_125384495	0.16902439454270551	UGUGCUU	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr1_+_166828982_166828999	0.16609604348394055	UGUGCUU	ENSMUST00000165874.8|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B	ENSMUST00000190081.7|Fam78b|ENSMUSG00000060568.15|family with sequence similarity 78, member B
mm39_v1_chr10_+_80330669_80330714	0.16537678304181022	UGUGCUU	ENSMUST00000051773.9|Onecut3|ENSMUSG00000045518.9|one cut domain, family member 3
mm39_v1_chr12_+_80509869_80509974	0.16531761293478564	UGUGCUU	ENSMUST00000038185.10|Exd2|ENSMUSG00000032705.10|exonuclease 3'-5' domain containing 2
mm39_v1_chr12_-_84265609_84265663	0.16456794483557866	UGUGCUU	ENSMUST00000046266.13|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein	ENSMUST00000220974.2|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein
mm39_v1_chr11_-_120524362_120524431	0.16176213656351213	UGUGCUU	ENSMUST00000058162.14|Mafg|ENSMUSG00000051510.14|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm39_v1_chr15_-_28025920_28025970	0.16154959453632006	UGUGCUU	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chr16_+_32882882_32882919	0.15752401244824252	UGUGCUU	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chr11_+_44508137_44508169	0.15713810456686392	UGUGCUU	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chr4_-_117354249_117354274	0.15544027752583822	UGUGCUU	ENSMUST00000030439.15|Rnf220|ENSMUSG00000028677.20|ring finger protein 220
mm39_v1_chr11_-_85030761_85030864	0.15478559957972143	UGUGCUU	ENSMUST00000108075.9|Usp32|ENSMUSG00000000804.15|ubiquitin specific peptidase 32
mm39_v1_chr3_-_129854477_129854556	0.1533858328366318	UGUGCUU	ENSMUST00000001079.15|Sec24b|ENSMUSG00000001052.16|Sec24 related gene family, member B (S. cerevisiae)
mm39_v1_chr10_+_56253418_56253434	0.1482903910908792	UGUGCUU	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr15_+_12205095_12205124	0.14741467729072225	UGUGCUU	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr15_+_85942928_85942981	0.14713447039844263	UGUGCUU	ENSMUST00000138134.8|Gramd4|ENSMUSG00000035900.19|GRAM domain containing 4
mm39_v1_chr19_-_8816530_8816632	0.14667627136860825	UGUGCUU	ENSMUST00000096259.6|Gng3|ENSMUSG00000071658.6|guanine nucleotide binding protein (G protein), gamma 3
mm39_v1_chr8_-_70573465_70573523	0.14633860916002936	UGUGCUU	ENSMUST00000002412.9|Ncan|ENSMUSG00000002341.9|neurocan
mm39_v1_chr7_+_100757940_100757961	0.14524689628374	UGUGCUU	ENSMUST00000032931.9|Fchsd2|ENSMUSG00000030691.16|FCH and double SH3 domains 2
mm39_v1_chr10_-_5872386_5872405	0.14424940434560124	UGUGCUU	ENSMUST00000131996.8|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17	ENSMUST00000064225.14|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17
mm39_v1_chr9_-_44145280_44145300	0.14345315780895587	UGUGCUU	ENSMUST00000205968.2|Cbl|ENSMUSG00000034342.10|Casitas B-lineage lymphoma	ENSMUST00000206147.2|Cbl|ENSMUSG00000034342.10|Casitas B-lineage lymphoma	ENSMUST00000037644.8|Cbl|ENSMUSG00000034342.10|Casitas B-lineage lymphoma
mm39_v1_chr8_+_107662352_107662410	0.14233847687688012	UGUGCUU	ENSMUST00000212524.2|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2	ENSMUST00000047425.5|Sntb2|ENSMUSG00000041308.7|syntrophin, basic 2
mm39_v1_chr5_+_130477642_130477671	0.13855599136046948	UGUGCUU	ENSMUST00000111288.4|Caln1|ENSMUSG00000060371.13|calneuron 1
mm39_v1_chr1_+_89382491_89382643	0.13683667914316577	UGUGCUU	ENSMUST00000027521.15|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	ENSMUST00000190096.7|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm39_v1_chr3_-_104869237_104869237	0.13549831795971126	UGUGCUU	ENSMUST00000029429.6|Wnt2b|ENSMUSG00000027840.6|wingless-type MMTV integration site family, member 2B
mm39_v1_chr17_+_74835290_74835369	0.1334776867471499	UGUGCUU	ENSMUST00000180037.8|Birc6|ENSMUSG00000024073.17|baculoviral IAP repeat-containing 6
mm39_v1_chr5_+_64960705_64960731	0.13339820813782546	UGUGCUU	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chrX_-_72868544_72868592	0.1315654988516025	UGUGCUU	ENSMUST00000002080.12|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4	ENSMUST00000114438.3|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4
mm39_v1_chr6_+_120341055_120341124	0.12985186380486574	UGUGCUU	ENSMUST00000005108.10|Kdm5a|ENSMUSG00000030180.16|lysine (K)-specific demethylase 5A
mm39_v1_chr10_-_94780695_94780724	0.12914481226354033	UGUGCUU	ENSMUST00000099337.5|Plxnc1|ENSMUSG00000074785.6|plexin C1
mm39_v1_chr14_-_104760051_104760143	0.1290302456104013	UGUGCUU	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr2_+_54326329_54326434	0.12781880278331184	UGUGCUU	ENSMUST00000112636.8|Galnt13|ENSMUSG00000060988.13|polypeptide N-acetylgalactosaminyltransferase 13	ENSMUST00000112635.8|Galnt13|ENSMUSG00000060988.13|polypeptide N-acetylgalactosaminyltransferase 13	ENSMUST00000112634.8|Galnt13|ENSMUSG00000060988.13|polypeptide N-acetylgalactosaminyltransferase 13
mm39_v1_chr16_+_17051423_17051528	0.1267000430305327	UGUGCUU	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr13_-_103470937_103471007	0.1257788086129147	UGUGCUU	ENSMUST00000167058.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4	ENSMUST00000164111.2|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr6_+_38410848_38410901	0.1252107608130151	UGUGCUU	ENSMUST00000160583.8|Ubn2|ENSMUSG00000038538.18|ubinuclein 2
mm39_v1_chr1_-_131455039_131455123	0.12418574803556935	UGUGCUU	ENSMUST00000097588.9|Srgap2|ENSMUSG00000026425.16|SLIT-ROBO Rho GTPase activating protein 2	ENSMUST00000186543.7|Srgap2|ENSMUSG00000026425.16|SLIT-ROBO Rho GTPase activating protein 2
mm39_v1_chr10_+_69932930_69933066	0.12253562889280735	UGUGCUU	ENSMUST00000147545.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chr19_-_5135510_5135559	0.1223380999226429	UGUGCUU	ENSMUST00000140389.8|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A	ENSMUST00000151413.2|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A	ENSMUST00000077066.8|Tmem151a|ENSMUSG00000061451.14|transmembrane protein 151A
mm39_v1_chr7_-_132201344_132201366	0.12131396904433164	UGUGCUU	ENSMUST00000054562.4|Nkx1-2|ENSMUSG00000048528.8|NK1 homeobox 2
mm39_v1_chr11_+_6339061_6339082	0.11866786280734365	UGUGCUU	ENSMUST00000109787.8|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chrX_-_73009933_73009982	0.11855890327153171	UGUGCUU	ENSMUST00000114372.3|Hcfc1|ENSMUSG00000031386.15|host cell factor C1	ENSMUST00000033761.13|Hcfc1|ENSMUSG00000031386.15|host cell factor C1
mm39_v1_chr9_-_66741998_66742008	0.11793439823780924	UGUGCUU	ENSMUST00000169282.8|Aph1c|ENSMUSG00000053040.14|aph1 homolog C, gamma secretase subunit
mm39_v1_chr10_+_128247598_128247627	0.11717278503745752	UGUGCUU	ENSMUST00000096386.13|Rnf41|ENSMUSG00000025373.15|ring finger protein 41
mm39_v1_chr19_-_29625755_29625825	0.1170640084836713	UGUGCUU	ENSMUST00000159692.8|Ermp1|ENSMUSG00000046324.13|endoplasmic reticulum metallopeptidase 1
mm39_v1_chr2_+_90770742_90770888	0.11675755567348318	UGUGCUU	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr3_-_97134680_97134738	0.11611865448550522	UGUGCUU	ENSMUST00000046521.14|Bcl9|ENSMUSG00000038256.16|B cell CLL/lymphoma 9
mm39_v1_chr2_+_15060051_15060222	0.11410386434109195	UGUGCUU	ENSMUST00000069870.11|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000239125.2|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000193836.3|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B
mm39_v1_chrX_-_41000746_41000787	0.11365151073627049	UGUGCUU	ENSMUST00000047037.15|Thoc2|ENSMUSG00000037475.16|THO complex 2
mm39_v1_chr13_+_89687915_89687915	0.11328316063073268	UGUGCUU	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr4_+_131600918_131600992	0.11211238773445864	UGUGCUU	ENSMUST00000053819.6|Srsf4|ENSMUSG00000028911.17|serine and arginine-rich splicing factor 4
mm39_v1_chr13_+_31809774_31809799	0.11196267223049919	UGUGCUU	ENSMUST00000042054.3|Foxf2|ENSMUSG00000038402.3|forkhead box F2
mm39_v1_chr9_+_45029080_45029179	0.11145676651268294	UGUGCUU	ENSMUST00000170998.9|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta	ENSMUST00000093855.4|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta
mm39_v1_chr1_-_57011595_57011661	0.11094166988684268	UGUGCUU	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr14_-_55329734_55329781	0.11089527370647756	UGUGCUU	ENSMUST00000036328.9|Zfhx2|ENSMUSG00000040721.10|zinc finger homeobox 2
mm39_v1_chr10_+_52566616_52566651	0.1103570043803833	UGUGCUU	ENSMUST00000105473.3|Slc35f1|ENSMUSG00000038602.8|solute carrier family 35, member F1
mm39_v1_chr17_+_29020064_29020108	0.11035594297956025	UGUGCUU	ENSMUST00000004985.11|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr11_+_97253221_97253377	0.10986645831835386	UGUGCUU	ENSMUST00000238729.2|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7	ENSMUST00000045540.4|Socs7|ENSMUSG00000038485.7|suppressor of cytokine signaling 7
mm39_v1_chr13_-_34529157_34529257	0.10866165810051676	UGUGCUU	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr15_+_84807582_84807625	0.10808643256950198	UGUGCUU	ENSMUST00000165443.4|Nup50|ENSMUSG00000016619.11|nucleoporin 50
mm39_v1_chr8_-_5155347_5155358	0.10721554997410458	UGUGCUU	ENSMUST00000023835.3|Slc10a2|ENSMUSG00000023073.3|solute carrier family 10, member 2
mm39_v1_chr18_+_36098090_36098165	0.10717274197574726	UGUGCUU	ENSMUST00000176873.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000177432.8|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2	ENSMUST00000175734.2|Psd2|ENSMUSG00000024347.17|pleckstrin and Sec7 domain containing 2
mm39_v1_chr16_+_55794244_55794255	0.10490883390867613	UGUGCUU	ENSMUST00000050248.9|Zbtb11|ENSMUSG00000022601.12|zinc finger and BTB domain containing 11
mm39_v1_chr18_+_34910064_34910128	0.10479633751938486	UGUGCUU	ENSMUST00000043775.9|Kdm3b|ENSMUSG00000038773.12|KDM3B lysine (K)-specific demethylase 3B	ENSMUST00000224715.2|Kdm3b|ENSMUSG00000038773.12|KDM3B lysine (K)-specific demethylase 3B
mm39_v1_chr19_+_59249316_59249333	0.1043192266730368	UGUGCUU	ENSMUST00000026084.5|Slc18a2|ENSMUSG00000025094.9|solute carrier family 18 (vesicular monoamine), member 2
mm39_v1_chr10_+_128212953_128213024	0.10407356030049762	UGUGCUU	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chrX_+_23559282_23559357	0.10207143672943794	UGUGCUU	ENSMUST00000035766.13|Wdr44|ENSMUSG00000036769.15|WD repeat domain 44	ENSMUST00000101670.3|Wdr44|ENSMUSG00000036769.15|WD repeat domain 44
mm39_v1_chr12_+_84161095_84161165	0.10195826628838113	UGUGCUU	ENSMUST00000123491.8|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000046340.9|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000136159.2|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1
mm39_v1_chr1_+_42734889_42734937	0.10183839832093919	UGUGCUU	ENSMUST00000054883.4|Pou3f3|ENSMUSG00000045515.5|POU domain, class 3, transcription factor 3
mm39_v1_chr14_-_21102487_21102592	0.10135697009148607	UGUGCUU	ENSMUST00000154460.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit	ENSMUST00000130291.8|Ap3m1|ENSMUSG00000021824.14|adaptor-related protein complex 3, mu 1 subunit
mm39_v1_chr12_-_79343040_79343086	0.10124389324398918	UGUGCUU	ENSMUST00000218377.2|Zfyve26|ENSMUSG00000066440.6|zinc finger, FYVE domain containing 26	ENSMUST00000021547.8|Zfyve26|ENSMUSG00000066440.6|zinc finger, FYVE domain containing 26
mm39_v1_chr12_+_3415143_3415207	0.09783616882142579	UGUGCUU	ENSMUST00000020999.7|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr13_-_47083194_47083276	0.09713554000408918	UGUGCUU	ENSMUST00000056978.8|Kif13a|ENSMUSG00000021375.12|kinesin family member 13A
mm39_v1_chr5_-_51711237_51711264	0.09668536217812188	UGUGCUU	ENSMUST00000132734.8|Ppargc1a|ENSMUSG00000029167.14|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm39_v1_chr7_-_121306476_121306685	0.0966120185394779	UGUGCUU	ENSMUST00000046929.7|Usp31|ENSMUSG00000063317.8|ubiquitin specific peptidase 31
mm39_v1_chr6_+_100810566_100810624	0.09536817121641082	UGUGCUU	ENSMUST00000063854.7|Ppp4r2|ENSMUSG00000052144.9|protein phosphatase 4, regulatory subunit 2
mm39_v1_chr16_+_42727926_42728047	0.09488288367855353	UGUGCUU	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr9_-_89505178_89505178	0.09482090960436396	UGUGCUU	ENSMUST00000044491.13|Minar1|ENSMUSG00000039313.15|membrane integral NOTCH2 associated receptor 1
mm39_v1_chr13_+_9143995_9144018	0.0932869997022122	UGUGCUU	ENSMUST00000091829.4|Larp4b|ENSMUSG00000033499.15|La ribonucleoprotein domain family, member 4B
mm39_v1_chr6_+_103487973_103488039	0.09269169223272809	UGUGCUU	ENSMUST00000066905.9|Chl1|ENSMUSG00000030077.12|cell adhesion molecule L1-like
mm39_v1_chr5_-_140634773_140634807	0.09224277548811681	UGUGCUU	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr7_-_80338600_80338690	0.09200738208809113	UGUGCUU	ENSMUST00000122255.8|Crtc3|ENSMUSG00000030527.16|CREB regulated transcription coactivator 3
mm39_v1_chr17_+_34811217_34811303	0.09098990639729256	UGUGCUU	ENSMUST00000038149.13|Pbx2|ENSMUSG00000034673.15|pre B cell leukemia homeobox 2
mm39_v1_chr1_+_139349912_139350120	0.09042237478688292	UGUGCUU	ENSMUST00000200243.5|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41	ENSMUST00000039867.10|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41
mm39_v1_chr4_-_41503046_41503122	0.09026257072722568	UGUGCUU	ENSMUST00000054920.5|Myorg|ENSMUSG00000046312.5|myogenesis regulating glycosidase (putative)
mm39_v1_chr10_+_27950809_27950870	0.08959513141466886	UGUGCUU	ENSMUST00000166468.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218359.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218276.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K
mm39_v1_chr19_+_46587523_46587617	0.08953503808649163	UGUGCUU	ENSMUST00000138302.9|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like	ENSMUST00000099376.11|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like
mm39_v1_chr7_+_58878490_58878518	0.08887513449684024	UGUGCUU	ENSMUST00000202945.4|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A	ENSMUST00000107537.5|Ube3a|ENSMUSG00000025326.13|ubiquitin protein ligase E3A
mm39_v1_chr11_+_19874354_19874375	0.08770570249212326	UGUGCUU	ENSMUST00000093299.13|Spred2|ENSMUSG00000045671.18|sprouty-related EVH1 domain containing 2
mm39_v1_chr5_+_88868714_88868734	0.08660319637189591	UGUGCUU	ENSMUST00000113229.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B	ENSMUST00000006424.8|Mob1b|ENSMUSG00000006262.16|MOB kinase activator 1B
mm39_v1_chr3_+_51391387_51391420	0.08465126921052946	UGUGCUU	ENSMUST00000054387.8|Rab33b|ENSMUSG00000027739.10|RAB33B, member RAS oncogene family
mm39_v1_chr9_+_56982622_56982727	0.0834581359866987	UGUGCUU	ENSMUST00000167715.8|Sin3a|ENSMUSG00000042557.15|transcriptional regulator, SIN3A (yeast)
mm39_v1_chr11_+_94827050_94827087	0.08196126230150323	UGUGCUU	ENSMUST00000001547.8|Col1a1|ENSMUSG00000001506.11|collagen, type I, alpha 1
mm39_v1_chr5_-_137784912_137784930	0.08122755972603557	UGUGCUU	ENSMUST00000031740.16|Mepce|ENSMUSG00000029726.17|methylphosphate capping enzyme
mm39_v1_chr1_+_178014983_178015280	0.0795979293553935	UGUGCUU	ENSMUST00000161075.8|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2	ENSMUST00000027783.14|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2
mm39_v1_chr3_-_31023547_31023573	0.07878007155511844	UGUGCUU	ENSMUST00000064718.12|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000177992.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000129817.9|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000168645.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000108255.8|Phc3|ENSMUSG00000037652.16|polyhomeotic 3	ENSMUST00000099163.5|Phc3|ENSMUSG00000037652.16|polyhomeotic 3
mm39_v1_chr11_-_86884507_86884538	0.07839406622335493	UGUGCUU	ENSMUST00000018571.5|Ypel2|ENSMUSG00000018427.9|yippee like 2
mm39_v1_chr10_-_8761777_8761821	0.07824430324253419	UGUGCUU	ENSMUST00000015449.6|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr4_-_94867300_94867344	0.07535693939632182	UGUGCUU	ENSMUST00000075872.4|Mysm1|ENSMUSG00000062627.10|myb-like, SWIRM and MPN domains 1
mm39_v1_chr2_-_166904902_166904967	0.07387709584855322	UGUGCUU	ENSMUST00000048988.14|Znfx1|ENSMUSG00000039501.15|zinc finger, NFX1-type containing 1
mm39_v1_chr17_+_85928459_85928469	0.07362673152911056	UGUGCUU	ENSMUST00000162695.3|Six3|ENSMUSG00000038805.11|sine oculis-related homeobox 3
mm39_v1_chr1_-_152778373_152778421	0.07340945189580901	UGUGCUU	ENSMUST00000073441.13|Smg7|ENSMUSG00000042772.16|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	ENSMUST00000111836.4|Smg7|ENSMUSG00000042772.16|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm39_v1_chr10_-_127124718_127124787	0.07325726549163121	UGUGCUU	ENSMUST00000156208.2|Mbd6|ENSMUSG00000025409.15|methyl-CpG binding domain protein 6	ENSMUST00000026476.13|Mbd6|ENSMUSG00000025409.15|methyl-CpG binding domain protein 6
mm39_v1_chr16_+_24212284_24212320	0.07230667432830974	UGUGCUU	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr12_+_35097179_35097230	0.07223686566075696	UGUGCUU	ENSMUST00000163677.3|Snx13|ENSMUSG00000020590.17|sorting nexin 13	ENSMUST00000048519.17|Snx13|ENSMUSG00000020590.17|sorting nexin 13
mm39_v1_chr18_-_47501897_47501945	0.07209945942251578	UGUGCUU	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr6_+_91661034_91661058	0.07161532792672289	UGUGCUU	ENSMUST00000032185.9|Slc6a6|ENSMUSG00000030096.9|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm39_v1_chr17_-_45047521_45047561	0.07158771696309878	UGUGCUU	ENSMUST00000113572.9|Runx2|ENSMUSG00000039153.18|runt related transcription factor 2
mm39_v1_chr12_-_69245191_69245203	0.07112495369228801	UGUGCUU	ENSMUST00000021356.6|Dnaaf2|ENSMUSG00000020973.8|dynein, axonemal assembly factor 2
mm39_v1_chr14_+_4230569_4230642	0.07095957117925146	UGUGCUU	ENSMUST00000090543.6|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr9_-_121534025_121534107	0.07068056305849571	UGUGCUU	ENSMUST00000078547.12|Sec22c|ENSMUSG00000061536.14|SEC22 homolog C, vesicle trafficking protein	ENSMUST00000111560.10|Sec22c|ENSMUSG00000061536.14|SEC22 homolog C, vesicle trafficking protein
mm39_v1_chr16_+_91855158_91855216	0.07044744285097151	UGUGCUU	ENSMUST00000047429.9|Mrps6|ENSMUSG00000039680.11|mitochondrial ribosomal protein S6	ENSMUST00000232677.2|Gm49711|ENSMUSG00000116930.2|predicted gene, 49711	ENSMUST00000113975.3|Slc5a3|ENSMUSG00000089774.3|solute carrier family 5 (inositol transporters), member 3
mm39_v1_chr15_+_103148824_103148921	0.06961877119174129	UGUGCUU	ENSMUST00000036004.16|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000087351.9|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000231141.2|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1
mm39_v1_chr1_+_115612458_115612486	0.06883119026867957	UGUGCUU	ENSMUST00000043725.9|Cntnap5a|ENSMUSG00000070695.5|contactin associated protein-like 5A
mm39_v1_chr2_+_71811526_71811631	0.06851245166062149	UGUGCUU	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr13_-_103911092_103911139	0.06793056766817479	UGUGCUU	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr9_-_113855776_113855833	0.06757519416460156	UGUGCUU	ENSMUST00000035090.14|Fbxl2|ENSMUSG00000032507.16|F-box and leucine-rich repeat protein 2
mm39_v1_chr17_-_71782296_71782354	0.06641389927472588	UGUGCUU	ENSMUST00000127430.2|Smchd1|ENSMUSG00000024054.15|SMC hinge domain containing 1
mm39_v1_chr5_+_117271632_117271714	0.06565915749330051	UGUGCUU	ENSMUST00000179276.8|Taok3|ENSMUSG00000061288.14|TAO kinase 3	ENSMUST00000092889.12|Taok3|ENSMUSG00000061288.14|TAO kinase 3	ENSMUST00000145640.8|Taok3|ENSMUSG00000061288.14|TAO kinase 3
mm39_v1_chr2_-_127363251_127363295	0.06547489149101769	UGUGCUU	ENSMUST00000028850.15|Kcnip3|ENSMUSG00000079056.13|Kv channel interacting protein 3, calsenilin	ENSMUST00000103215.11|Kcnip3|ENSMUSG00000079056.13|Kv channel interacting protein 3, calsenilin
mm39_v1_chr14_+_67953547_67953571	0.06540981377580268	UGUGCUU	ENSMUST00000078053.13|Kctd9|ENSMUSG00000034327.18|potassium channel tetramerisation domain containing 9
mm39_v1_chr9_+_22010512_22010583	0.06431215702732443	UGUGCUU	ENSMUST00000214601.2|Cnn1|ENSMUSG00000001349.6|calponin 1	ENSMUST00000001384.6|Cnn1|ENSMUSG00000001349.6|calponin 1
mm39_v1_chr1_+_88998115_88998147	0.061809052723644786	UGUGCUU	ENSMUST00000066279.11|Sh3bp4|ENSMUSG00000036206.13|SH3-domain binding protein 4
mm39_v1_chr8_-_85414528_85414539	0.06087423592574398	UGUGCUU	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr1_+_127701901_127701975	0.06052585577437492	UGUGCUU	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr5_-_21156766_21156824	0.06018392485113915	UGUGCUU	ENSMUST00000036489.10|Rsbn1l|ENSMUSG00000039968.10|round spermatid basic protein 1-like
mm39_v1_chr12_-_67269323_67269354	0.05996359599201103	UGUGCUU	ENSMUST00000037181.16|Mdga2|ENSMUSG00000034912.19|MAM domain containing glycosylphosphatidylinositol anchor 2
mm39_v1_chr16_-_3690243_3690275	0.0587038216879904	UGUGCUU	ENSMUST00000090522.5|Zfp597|ENSMUSG00000039789.8|zinc finger protein 597
mm39_v1_chr1_-_176102840_176102875	0.058216367808180486	UGUGCUU	ENSMUST00000111166.2|Pld5|ENSMUSG00000055214.16|phospholipase D family, member 5	ENSMUST00000065967.14|Pld5|ENSMUSG00000055214.16|phospholipase D family, member 5
mm39_v1_chr13_+_14238361_14238407	0.05821252259111896	UGUGCUU	ENSMUST00000129488.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110536.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110534.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000039538.15|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110533.2|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)
mm39_v1_chrX_-_73129195_73129296	0.05780738528642697	UGUGCUU	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chr18_+_36414122_36414204	0.05743793620848264	UGUGCUU	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr15_-_73056713_73056822	0.056943742179298304	UGUGCUU	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr13_-_101904662_101904725	0.056782568976535316	UGUGCUU	ENSMUST00000055518.13|Pik3r1|ENSMUSG00000041417.16|phosphoinositide-3-kinase regulatory subunit 1
mm39_v1_chr13_+_83652352_83652374	0.05637240116598037	UGUGCUU	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr16_+_51851588_51851705	0.05582840852937589	UGUGCUU	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr12_+_8724129_8724150	0.05401909701785441	UGUGCUU	ENSMUST00000111123.9|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000178015.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000020915.10|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2
mm39_v1_chr3_+_96011810_96011883	0.05389855567285398	UGUGCUU	ENSMUST00000132980.8|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000138206.8|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000090785.9|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B	ENSMUST00000035519.12|Otud7b|ENSMUSG00000038495.15|OTU domain containing 7B
mm39_v1_chr15_+_6737853_6737883	0.053252829505688645	UGUGCUU	ENSMUST00000061656.8|Rictor|ENSMUSG00000050310.10|RPTOR independent companion of MTOR, complex 2
mm39_v1_chr16_-_45830575_45830587	0.052954270406161366	UGUGCUU	ENSMUST00000130481.2|Plcxd2|ENSMUSG00000087141.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm39_v1_chr3_-_69034425_69034446	0.05275173350849961	UGUGCUU	ENSMUST00000194558.6|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4	ENSMUST00000029353.9|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4
mm39_v1_chr6_-_85310393_85310424	0.0524589714825271	UGUGCUU	ENSMUST00000059034.13|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5	ENSMUST00000045846.12|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5	ENSMUST00000113788.2|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5
mm39_v1_chr2_+_167345009_167345144	0.052248648450369556	UGUGCUU	ENSMUST00000078050.7|Rnf114|ENSMUSG00000006418.18|ring finger protein 114
mm39_v1_chr13_-_93636224_93636333	0.051828115099794084	UGUGCUU	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr11_+_20493306_20493338	0.051631419371182194	UGUGCUU	ENSMUST00000093292.11|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr5_+_110283689_110283791	0.05116466575398965	UGUGCUU	ENSMUST00000200038.2|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000112519.9|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000198633.5|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000014812.13|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains	ENSMUST00000199811.3|Chfr|ENSMUSG00000014668.16|checkpoint with forkhead and ring finger domains
mm39_v1_chr4_-_22488296_22488366	0.05101489799392284	UGUGCUU	ENSMUST00000178174.3|Pou3f2|ENSMUSG00000095139.3|POU domain, class 3, transcription factor 2
mm39_v1_chr9_-_50920236_50920380	0.05095593444365132	UGUGCUU	ENSMUST00000176824.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000176663.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000041375.11|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2
mm39_v1_chr19_-_7319157_7319195	0.05065159857536035	UGUGCUU	ENSMUST00000164205.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000165286.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000168324.2|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000032557.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr1_-_84818223_84818261	0.05053668733784741	UGUGCUU	ENSMUST00000186465.7|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr7_-_134539993_134540159	0.05045921863949528	UGUGCUU	ENSMUST00000171394.3|Insyn2a|ENSMUSG00000073805.6|inhibitory synaptic factor 2A
mm39_v1_chr1_-_189902868_189902942	0.04985424289399625	UGUGCUU	ENSMUST00000177288.4|Prox1|ENSMUSG00000010175.14|prospero homeobox 1	ENSMUST00000175916.8|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr9_-_66702750_66702804	0.049513828168393864	UGUGCUU	ENSMUST00000034934.15|Aph1b|ENSMUSG00000032375.16|aph1 homolog B, gamma secretase subunit
mm39_v1_chr2_-_130681978_130682070	0.04762772880672174	UGUGCUU	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr3_+_151916059_151916102	0.047455544191160576	UGUGCUU	ENSMUST00000166984.8|Fubp1|ENSMUSG00000028034.16|far upstream element (FUSE) binding protein 1
mm39_v1_chr16_-_21513317_21513415	0.04682193917883732	UGUGCUU	ENSMUST00000231592.2|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene	ENSMUST00000053336.8|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene
mm39_v1_chr6_-_24664959_24665039	0.04676362244789568	UGUGCUU	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr15_+_10177709_10177741	0.046756451371202414	UGUGCUU	ENSMUST00000124470.8|Prlr|ENSMUSG00000005268.21|prolactin receptor
mm39_v1_chr8_+_105951777_105951827	0.04552520089765093	UGUGCUU	ENSMUST00000034361.10|D230025D16Rik|ENSMUSG00000031889.10|RIKEN cDNA D230025D16 gene
mm39_v1_chr11_+_29323618_29323777	0.0454990611540141	UGUGCUU	ENSMUST00000040182.13|Ccdc88a|ENSMUSG00000032740.18|coiled coil domain containing 88A	ENSMUST00000109477.2|Ccdc88a|ENSMUSG00000032740.18|coiled coil domain containing 88A
mm39_v1_chr15_-_66158445_66158509	0.04543051749681367	UGUGCUU	ENSMUST00000070256.9|Kcnq3|ENSMUSG00000056258.10|potassium voltage-gated channel, subfamily Q, member 3
mm39_v1_chrX_+_158197568_158197585	0.04489135543611991	UGUGCUU	ENSMUST00000112471.9|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2
mm39_v1_chr12_+_86288626_86288711	0.04478282199097275	UGUGCUU	ENSMUST00000221368.2|Gpatch2l|ENSMUSG00000021254.10|G patch domain containing 2 like	ENSMUST00000071106.6|Gpatch2l|ENSMUSG00000021254.10|G patch domain containing 2 like
mm39_v1_chr9_+_119723931_119723979	0.04468163532838223	UGUGCUU	ENSMUST00000036561.8|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48	ENSMUST00000217472.2|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48	ENSMUST00000215307.2|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48
mm39_v1_chr10_+_69048464_69048503	0.04270630772294153	UGUGCUU	ENSMUST00000020101.12|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1
mm39_v1_chr4_+_115696388_115696441	0.04260948728296993	UGUGCUU	ENSMUST00000019677.12|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000144427.8|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000106513.10|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000130819.8|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000151203.8|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1	ENSMUST00000140315.2|Mknk1|ENSMUSG00000028708.17|MAP kinase-interacting serine/threonine kinase 1
mm39_v1_chr5_+_34153328_34153375	0.042579508751157145	UGUGCUU	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr14_+_59438658_59438716	0.04248729045512856	UGUGCUU	ENSMUST00000173547.8|Rcbtb1|ENSMUSG00000035469.18|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	ENSMUST00000043227.13|Rcbtb1|ENSMUSG00000035469.18|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	ENSMUST00000022551.14|Rcbtb1|ENSMUSG00000035469.18|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm39_v1_chr12_+_84498196_84498292	0.041800118912206814	UGUGCUU	ENSMUST00000137170.3|Lin52|ENSMUSG00000085793.3|lin-52 homolog (C. elegans)
mm39_v1_chr7_+_135139542_135139560	0.04111101166011154	UGUGCUU	ENSMUST00000073961.8|Ptpre|ENSMUSG00000041836.11|protein tyrosine phosphatase, receptor type, E
mm39_v1_chr19_-_18978463_18978483	0.0408144668797682	UGUGCUU	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr2_+_76236870_76236936	0.04075711619233451	UGUGCUU	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr3_+_52948938_52949004	0.04070959634427945	UGUGCUU	ENSMUST00000059562.14|Lhfp|ENSMUSG00000048332.14|lipoma HMGIC fusion partner	ENSMUST00000147139.2|Lhfp|ENSMUSG00000048332.14|lipoma HMGIC fusion partner
mm39_v1_chr2_+_10377237_10377309	0.04070131641355996	UGUGCUU	ENSMUST00000114864.9|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2	ENSMUST00000116594.9|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2	ENSMUST00000041105.7|Sfmbt2|ENSMUSG00000061186.16|Scm-like with four mbt domains 2
mm39_v1_chr2_-_25982160_25982189	0.03987615887781936	UGUGCUU	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chr2_-_163760603_163760603	0.03973304198462006	UGUGCUU	ENSMUST00000044734.3|Rims4|ENSMUSG00000035226.6|regulating synaptic membrane exocytosis 4
mm39_v1_chr3_-_80710097_80710147	0.039509929116843694	UGUGCUU	ENSMUST00000075316.10|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)	ENSMUST00000107745.8|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm39_v1_chr8_-_124242072_124242151	0.039398544892007545	UGUGCUU	ENSMUST00000177240.8|Dbndd1|ENSMUSG00000031970.17|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm39_v1_chr6_-_128120488_128120556	0.039164485105089165	UGUGCUU	ENSMUST00000145940.8|Tspan9|ENSMUSG00000030352.16|tetraspanin 9	ENSMUST00000032503.12|Tspan9|ENSMUSG00000030352.16|tetraspanin 9	ENSMUST00000154375.8|Tspan9|ENSMUSG00000030352.16|tetraspanin 9	ENSMUST00000112173.8|Tspan9|ENSMUSG00000030352.16|tetraspanin 9
mm39_v1_chr3_-_89067462_89067521	0.03895482126048116	UGUGCUU	ENSMUST00000029686.4|Hcn3|ENSMUSG00000028051.11|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm39_v1_chr12_-_107969853_107969872	0.03872130285771855	UGUGCUU	ENSMUST00000066060.11|Bcl11b|ENSMUSG00000048251.16|B cell leukemia/lymphoma 11B
mm39_v1_chr19_-_60569323_60569468	0.03830707272914943	UGUGCUU	ENSMUST00000111460.5|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000166712.9|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000081790.15|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1
mm39_v1_chr3_-_58599812_58599834	0.038078141217256035	UGUGCUU	ENSMUST00000070368.8|Siah2|ENSMUSG00000036432.9|siah E3 ubiquitin protein ligase 2
mm39_v1_chr1_-_80191649_80191666	0.03771864282466455	UGUGCUU	ENSMUST00000058748.2|Fam124b|ENSMUSG00000043230.3|family with sequence similarity 124, member B
mm39_v1_chr2_+_156262756_156262837	0.03726072605697667	UGUGCUU	ENSMUST00000103137.10|Epb41l1|ENSMUSG00000027624.21|erythrocyte membrane protein band 4.1 like 1
mm39_v1_chr11_+_98754434_98754472	0.037051776848564894	UGUGCUU	ENSMUST00000142414.8|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2	ENSMUST00000037480.9|Wipf2|ENSMUSG00000038013.15|WAS/WASL interacting protein family, member 2
mm39_v1_chr15_-_82796308_82796390	0.036910632442345624	UGUGCUU	ENSMUST00000109510.10|Tcf20|ENSMUSG00000041852.16|transcription factor 20	ENSMUST00000048966.7|Tcf20|ENSMUSG00000041852.16|transcription factor 20
mm39_v1_chr4_-_44167509_44167609	0.036867859251958866	UGUGCUU	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr6_-_38230890_38231089	0.03644857168333661	UGUGCUU	ENSMUST00000117556.8|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene	ENSMUST00000169256.5|D630045J12Rik|ENSMUSG00000063455.17|RIKEN cDNA D630045J12 gene
mm39_v1_chr7_-_99770653_99770772	0.036197827196169895	UGUGCUU	ENSMUST00000208670.2|Pold3|ENSMUSG00000030726.17|polymerase (DNA-directed), delta 3, accessory subunit	ENSMUST00000032969.14|Pold3|ENSMUSG00000030726.17|polymerase (DNA-directed), delta 3, accessory subunit
mm39_v1_chr11_+_59553296_59553369	0.03586003853556245	UGUGCUU	ENSMUST00000072031.13|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein	ENSMUST00000066330.15|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein	ENSMUST00000108751.8|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein	ENSMUST00000116371.8|Mprip|ENSMUSG00000005417.18|myosin phosphatase Rho interacting protein
mm39_v1_chr4_-_155306992_155307049	0.03568866014936287	UGUGCUU	ENSMUST00000084103.10|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)	ENSMUST00000030917.6|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)
mm39_v1_chr5_-_113458563_113458654	0.03566865076623232	UGUGCUU	ENSMUST00000154248.8|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1	ENSMUST00000112325.8|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1	ENSMUST00000048112.13|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1
mm39_v1_chr10_-_77254041_77254111	0.0355500769439882	UGUGCUU	ENSMUST00000020496.14|Adarb1|ENSMUSG00000020262.16|adenosine deaminase, RNA-specific, B1	ENSMUST00000098374.9|Adarb1|ENSMUSG00000020262.16|adenosine deaminase, RNA-specific, B1	ENSMUST00000105406.8|Adarb1|ENSMUSG00000020262.16|adenosine deaminase, RNA-specific, B1
mm39_v1_chr11_+_70735572_70735642	0.035409176129724926	UGUGCUU	ENSMUST00000076270.13|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000179114.8|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000100928.11|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1
mm39_v1_chr9_-_119151428_119151517	0.03520911054413207	UGUGCUU	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr18_-_77652820_77652858	0.03456190010640016	UGUGCUU	ENSMUST00000026494.14|Rnf165|ENSMUSG00000025427.16|ring finger protein 165	ENSMUST00000182024.2|Rnf165|ENSMUSG00000025427.16|ring finger protein 165
mm39_v1_chr2_+_102488985_102489014	0.03415838176454023	UGUGCUU	ENSMUST00000080210.10|Slc1a2|ENSMUSG00000005089.16|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm39_v1_chr1_-_184731672_184731767	0.03396763620589133	UGUGCUU	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr6_-_128332789_128332819	0.03381990585421379	UGUGCUU	ENSMUST00000001562.9|Tulp3|ENSMUSG00000001521.13|tubby-like protein 3
mm39_v1_chr9_+_74860335_74860374	0.033300951870741446	UGUGCUU	ENSMUST00000170846.8|Fam214a|ENSMUSG00000034858.17|family with sequence similarity 214, member A
mm39_v1_chr14_-_122703089_122703089	0.032296236359564225	UGUGCUU	ENSMUST00000039118.7|Zic5|ENSMUSG00000041703.8|zinc finger protein of the cerebellum 5
mm39_v1_chr18_-_10182007_10182092	0.03168439152350133	UGUGCUU	ENSMUST00000067947.7|Rock1|ENSMUSG00000024290.10|Rho-associated coiled-coil containing protein kinase 1
mm39_v1_chr6_-_100264439_100264461	0.03134465636493367	UGUGCUU	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr3_-_104960437_104960467	0.031076341662068067	UGUGCUU	ENSMUST00000077548.12|Cttnbp2nl|ENSMUSG00000062127.12|CTTNBP2 N-terminal like
mm39_v1_chr8_+_105067159_105067255	0.030813268781709372	UGUGCUU	ENSMUST00000212948.2|Cmtm3|ENSMUSG00000031875.8|CKLF-like MARVEL transmembrane domain containing 3	ENSMUST00000034343.5|Cmtm3|ENSMUSG00000031875.8|CKLF-like MARVEL transmembrane domain containing 3
mm39_v1_chr1_+_191638854_191638879	0.030716196573416798	UGUGCUU	ENSMUST00000044954.7|Slc30a1|ENSMUSG00000037434.8|solute carrier family 30 (zinc transporter), member 1
mm39_v1_chr2_-_113588983_113589000	0.030172851902669752	UGUGCUU	ENSMUST00000099575.4|Grem1|ENSMUSG00000074934.4|gremlin 1, DAN family BMP antagonist
mm39_v1_chr1_-_54965470_54965561	0.0300367608592691	UGUGCUU	ENSMUST00000179030.8|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44	ENSMUST00000044359.16|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44
mm39_v1_chr9_-_25063068_25063136	0.02977656611747336	UGUGCUU	ENSMUST00000008573.9|Herpud2|ENSMUSG00000008429.9|HERPUD family member 2
mm39_v1_chr13_+_96679233_96679283	0.029461751336301457	UGUGCUU	ENSMUST00000077672.12|Cert1|ENSMUSG00000021669.16|ceramide transporter 1	ENSMUST00000109444.3|Cert1|ENSMUSG00000021669.16|ceramide transporter 1
mm39_v1_chr12_-_87247082_87247228	0.029132811523401404	UGUGCUU	ENSMUST00000037418.7|Tmed8|ENSMUSG00000034111.7|transmembrane p24 trafficking protein 8
mm39_v1_chr11_-_86435579_86435631	0.028560030256842065	UGUGCUU	ENSMUST00000138810.3|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000058286.9|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000154617.8|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1
mm39_v1_chrX_+_74460234_74460256	0.02794112433820636	UGUGCUU	ENSMUST00000033544.14|Brcc3|ENSMUSG00000031201.18|BRCA1/BRCA2-containing complex, subunit 3
mm39_v1_chr2_-_63014622_63014681	0.027659396515763466	UGUGCUU	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr3_-_97796001_97796135	0.026938613637693242	UGUGCUU	ENSMUST00000168438.9|Pde4dip|ENSMUSG00000038170.16|phosphodiesterase 4D interacting protein (myomegalin)	ENSMUST00000090750.12|Pde4dip|ENSMUSG00000038170.16|phosphodiesterase 4D interacting protein (myomegalin)
mm39_v1_chr2_+_71042050_71042138	0.026722940288712128	UGUGCUU	ENSMUST00000112142.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112139.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112140.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112138.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2
mm39_v1_chr11_-_70910058_70910129	0.026083113212739744	UGUGCUU	ENSMUST00000108523.10|Derl2|ENSMUSG00000018442.14|Der1-like domain family, member 2	ENSMUST00000143850.8|Derl2|ENSMUSG00000018442.14|Der1-like domain family, member 2
mm39_v1_chr1_+_165123358_165123358	0.025748700656370922	UGUGCUU	ENSMUST00000178700.8|Gpr161|ENSMUSG00000040836.16|G protein-coupled receptor 161
mm39_v1_chr1_+_156386414_156386619	0.024581803269340136	UGUGCUU	ENSMUST00000166172.9|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	ENSMUST00000027888.13|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr9_-_65734826_65734859	0.024441471216562306	UGUGCUU	ENSMUST00000159109.2|Zfp609|ENSMUSG00000040524.10|zinc finger protein 609
mm39_v1_chr16_-_16377982_16378114	0.02419733074206688	UGUGCUU	ENSMUST00000161861.8|Fgd4|ENSMUSG00000022788.17|FYVE, RhoGEF and PH domain containing 4
mm39_v1_chr9_-_66826928_66826992	0.023825678230365365	UGUGCUU	ENSMUST00000041139.9|Rab8b|ENSMUSG00000036943.10|RAB8B, member RAS oncogene family
mm39_v1_chr11_-_88609048_88609136	0.023068264650329132	UGUGCUU	ENSMUST00000107909.8|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr4_-_70453140_70453224	0.022935368264028227	UGUGCUU	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chrX_-_142716200_142716307	0.022458749419416318	UGUGCUU	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr2_+_116951855_116951880	0.022250074594321385	UGUGCUU	ENSMUST00000028829.13|Spred1|ENSMUSG00000027351.15|sprouty protein with EVH-1 domain 1, related sequence
mm39_v1_chr1_-_181039509_181039580	0.022123432358331047	UGUGCUU	ENSMUST00000162819.9|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26	ENSMUST00000237749.2|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26
mm39_v1_chr7_-_67022520_67022609	0.021624186610100262	UGUGCUU	ENSMUST00000156690.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000107476.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000076325.12|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000032776.15|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000133074.2|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A
mm39_v1_chr11_+_105480796_105480857	0.021588254817846816	UGUGCUU	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr1_-_131172903_131172995	0.021360738932530755	UGUGCUU	ENSMUST00000027688.15|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5	ENSMUST00000112442.2|Rassf5|ENSMUSG00000026430.17|Ras association (RalGDS/AF-6) domain family member 5
mm39_v1_chr6_+_87019819_87019900	0.020721865343155923	UGUGCUU	ENSMUST00000113657.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000113658.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000113655.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1	ENSMUST00000032057.8|Gfpt1|ENSMUSG00000029992.15|glutamine fructose-6-phosphate transaminase 1
mm39_v1_chr6_-_32565127_32565148	0.020648946927246795	UGUGCUU	ENSMUST00000115096.4|Plxna4|ENSMUSG00000029765.13|plexin A4
mm39_v1_chr1_+_75336965_75336997	0.02063680917102608	UGUGCUU	ENSMUST00000027409.10|Des|ENSMUSG00000026208.10|desmin
mm39_v1_chr9_+_78020554_78020659	0.020572155964471154	UGUGCUU	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr15_-_103248512_103248527	0.02021450085942769	UGUGCUU	ENSMUST00000168828.3|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr16_+_84631956_84632012	0.019654061901223974	UGUGCUU	ENSMUST00000009120.8|Gabpa|ENSMUSG00000008976.17|GA repeat binding protein, alpha
mm39_v1_chr11_-_117859997_117860018	0.018206960935991896	UGUGCUU	ENSMUST00000054002.4|Socs3|ENSMUSG00000053113.4|suppressor of cytokine signaling 3
mm39_v1_chr11_-_6425877_6425917	0.018150927721135142	UGUGCUU	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chr11_+_117006020_117006083	0.018120178453988327	UGUGCUU	ENSMUST00000103026.10|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1	ENSMUST00000090433.6|Sec14l1|ENSMUSG00000020823.17|SEC14-like lipid binding 1
mm39_v1_chr11_+_69792642_69792720	0.017870944902494242	UGUGCUU	ENSMUST00000177138.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000108617.10|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000177476.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000061837.11|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4
mm39_v1_chr9_+_100956734_100956815	0.0178263110784497	UGUGCUU	ENSMUST00000085177.5|Msl2|ENSMUSG00000066415.5|MSL complex subunit 2
mm39_v1_chr6_+_30401864_30401997	0.016074343047462542	UGUGCUU	ENSMUST00000068240.13|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10	ENSMUST00000068259.10|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10	ENSMUST00000132581.8|Klhdc10|ENSMUSG00000029775.15|kelch domain containing 10
mm39_v1_chr2_-_33777874_33777958	0.015942454076089775	UGUGCUU	ENSMUST00000041555.10|Mvb12b|ENSMUSG00000038740.10|multivesicular body subunit 12B
mm39_v1_chr18_-_79152504_79152606	0.015938330722763967	UGUGCUU	ENSMUST00000025430.11|Setbp1|ENSMUSG00000024548.12|SET binding protein 1
mm39_v1_chr11_+_105069591_105069633	0.014234063871287894	UGUGCUU	ENSMUST00000106939.9|Tlk2|ENSMUSG00000020694.18|tousled-like kinase 2 (Arabidopsis)
mm39_v1_chr5_+_121987050_121987069	0.01403946765409115	UGUGCUU	ENSMUST00000056654.8|Pheta1|ENSMUSG00000044134.10|PH domain containing endocytic trafficking adaptor 1	ENSMUST00000198155.2|Pheta1|ENSMUSG00000044134.10|PH domain containing endocytic trafficking adaptor 1
mm39_v1_chrX_+_20714782_20714828	0.014010038990892147	UGUGCUU	ENSMUST00000001155.11|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase	ENSMUST00000122312.8|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase	ENSMUST00000120356.8|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase	ENSMUST00000122850.2|Araf|ENSMUSG00000001127.13|Araf proto-oncogene, serine/threonine kinase
mm39_v1_chr14_-_20718337_20718422	0.01330259947096832	UGUGCUU	ENSMUST00000057090.12|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like	ENSMUST00000117386.2|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like
mm39_v1_chr11_+_102175757_102175857	0.013201775408796865	UGUGCUU	ENSMUST00000036376.13|Tmub2|ENSMUSG00000034757.16|transmembrane and ubiquitin-like domain containing 2	ENSMUST00000100387.11|Tmub2|ENSMUSG00000034757.16|transmembrane and ubiquitin-like domain containing 2
mm39_v1_chr4_+_21776261_21776297	0.012994867565629146	UGUGCUU	ENSMUST00000065111.15|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45	ENSMUST00000040429.12|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45	ENSMUST00000148304.8|Usp45|ENSMUSG00000040455.18|ubiquitin specific petidase 45
mm39_v1_chr1_-_165462020_165462110	0.012763653309747578	UGUGCUU	ENSMUST00000194437.6|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000068705.13|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000111435.9|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000193023.2|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1
mm39_v1_chr10_-_116417333_116417416	0.01255062744277713	UGUGCUU	ENSMUST00000218744.2|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105267.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105265.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000167706.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000168036.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000169921.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000020374.6|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr12_+_105750952_105751131	0.01236518649400284	UGUGCUU	ENSMUST00000109901.9|Papola|ENSMUSG00000021111.16|poly (A) polymerase alpha	ENSMUST00000168186.8|Papola|ENSMUSG00000021111.16|poly (A) polymerase alpha	ENSMUST00000163473.8|Papola|ENSMUSG00000021111.16|poly (A) polymerase alpha	ENSMUST00000170540.8|Papola|ENSMUSG00000021111.16|poly (A) polymerase alpha	ENSMUST00000166735.8|Papola|ENSMUSG00000021111.16|poly (A) polymerase alpha	ENSMUST00000170002.8|Papola|ENSMUSG00000021111.16|poly (A) polymerase alpha
mm39_v1_chr1_+_60219724_60219797	0.010806830301669157	UGUGCUU	ENSMUST00000160834.8|Nbeal1|ENSMUSG00000073664.12|neurobeachin like 1
mm39_v1_chr14_+_103887644_103887679	0.009409390933889603	UGUGCUU	ENSMUST00000069443.14|Slain1|ENSMUSG00000055717.14|SLAIN motif family, member 1
mm39_v1_chr12_-_72117865_72117899	0.009241087230851857	UGUGCUU	ENSMUST00000050649.6|Gpr135|ENSMUSG00000043398.6|G protein-coupled receptor 135
mm39_v1_chr11_+_97690391_97690423	0.009055725891197347	UGUGCUU	ENSMUST00000043843.12|Lasp1|ENSMUSG00000038366.16|LIM and SH3 protein 1
mm39_v1_chr8_-_72124359_72124416	0.008984765364009753	UGUGCUU	ENSMUST00000177517.8|Unc13a|ENSMUSG00000034799.17|unc-13 homolog A	ENSMUST00000030170.15|Unc13a|ENSMUSG00000034799.17|unc-13 homolog A
mm39_v1_chr3_+_75464837_75464869	0.008918446590636148	UGUGCUU	ENSMUST00000161776.8|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1	ENSMUST00000029423.9|Serpini1|ENSMUSG00000027834.16|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm39_v1_chr6_+_45036970_45037001	0.008585378540047149	UGUGCUU	ENSMUST00000114641.8|Cntnap2|ENSMUSG00000039419.18|contactin associated protein-like 2
mm39_v1_chr11_-_118931731_118931795	0.008551796692239384	UGUGCUU	ENSMUST00000026663.8|Cbx8|ENSMUSG00000025578.10|chromobox 8
mm39_v1_chr18_-_63520195_63520260	0.008518564044002995	UGUGCUU	ENSMUST00000047480.13|Piezo2|ENSMUSG00000041482.18|piezo-type mechanosensitive ion channel component 2
mm39_v1_chrX_+_158410229_158410294	0.00839231042025059	UGUGCUU	ENSMUST00000112456.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr6_+_86055048_86055071	0.008194906891606615	UGUGCUU	ENSMUST00000032069.8|Add2|ENSMUSG00000030000.11|adducin 2 (beta)
mm39_v1_chr9_+_59485475_59485620	0.008148678121641082	UGUGCUU	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr8_-_85526653_85526912	0.00789059129681459	UGUGCUU	ENSMUST00000126806.2|Nfix|ENSMUSG00000001911.17|nuclear factor I/X	ENSMUST00000076715.13|Nfix|ENSMUSG00000001911.17|nuclear factor I/X
mm39_v1_chr10_+_80100812_80100867	0.007462515209947453	UGUGCUU	ENSMUST00000105362.8|Dazap1|ENSMUSG00000069565.13|DAZ associated protein 1	ENSMUST00000105361.10|Dazap1|ENSMUSG00000069565.13|DAZ associated protein 1
mm39_v1_chr1_-_155617773_155617790	0.007247971101260977	UGUGCUU	ENSMUST00000027740.14|Lhx4|ENSMUSG00000026468.15|LIM homeobox protein 4
mm39_v1_chr6_-_51989456_51989531	0.007047410378944741	UGUGCUU	ENSMUST00000078214.8|Skap2|ENSMUSG00000059182.9|src family associated phosphoprotein 2	ENSMUST00000204778.3|Skap2|ENSMUSG00000059182.9|src family associated phosphoprotein 2
mm39_v1_chr10_+_115854118_115854328	0.005867929605523698	UGUGCUU	ENSMUST00000063470.11|Ptprr|ENSMUSG00000020151.17|protein tyrosine phosphatase, receptor type, R
mm39_v1_chr4_+_57434247_57434369	0.005773326528719956	UGUGCUU	ENSMUST00000102905.8|Pakap|ENSMUSG00000090053.10|paralemmin A kinase anchor protein
mm39_v1_chrX_-_7054952_7054981	0.005732566501718429	UGUGCUU	ENSMUST00000004428.14|Clcn5|ENSMUSG00000004317.15|chloride channel, voltage-sensitive 5
mm39_v1_chr13_+_111822712_111822745	0.0056844410003545	UGUGCUU	ENSMUST00000109272.9|Mier3|ENSMUSG00000032727.15|MIER family member 3
mm39_v1_chr2_-_104647041_104647138	0.005587135515936898	UGUGCUU	ENSMUST00000117237.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1	ENSMUST00000231375.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1
mm39_v1_chr6_-_59001455_59001534	0.0049502411573521055	UGUGCUU	ENSMUST00000089860.12|Fam13a|ENSMUSG00000037709.14|family with sequence similarity 13, member A
mm39_v1_chr7_+_120991489_120991513	0.0042807291125079175	UGUGCUU	ENSMUST00000084628.5|Hs3st2|ENSMUSG00000046321.9|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
mm39_v1_chr8_-_8711211_8711250	0.004092514869893398	UGUGCUU	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr10_+_43354807_43354859	0.003689349981301427	UGUGCUU	ENSMUST00000167488.9|Bend3|ENSMUSG00000038214.16|BEN domain containing 3
mm39_v1_chr5_-_136596299_136596390	0.003657674438497255	UGUGCUU	ENSMUST00000004097.16|Cux1|ENSMUSG00000029705.18|cut-like homeobox 1
mm39_v1_chr11_-_77380492_77380527	0.0029460555852996342	UGUGCUU	ENSMUST00000037593.14|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b	ENSMUST00000092892.10|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b
mm39_v1_chrX_+_52001108_52001238	0.0028486326353916944	UGUGCUU	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr17_-_83939316_83939335	0.0027598938220928233	UGUGCUU	ENSMUST00000234613.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3	ENSMUST00000051482.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3
mm39_v1_chr19_-_36034740_36034773	0.0022153874954543165	UGUGCUU	ENSMUST00000164639.8|Htr7|ENSMUSG00000024798.16|5-hydroxytryptamine (serotonin) receptor 7	ENSMUST00000166074.2|Htr7|ENSMUSG00000024798.16|5-hydroxytryptamine (serotonin) receptor 7	ENSMUST00000099505.4|Htr7|ENSMUSG00000024798.16|5-hydroxytryptamine (serotonin) receptor 7
mm39_v1_chr3_+_96088467_96088483	0.001994300914512995	UGUGCUU	ENSMUST00000035371.9|Sv2a|ENSMUSG00000038486.10|synaptic vesicle glycoprotein 2 a
mm39_v1_chr9_-_44792575_44792621	0.0019033012685463785	UGUGCUU	ENSMUST00000114689.8|Kmt2a|ENSMUSG00000002028.14|lysine (K)-specific methyltransferase 2A	ENSMUST00000002095.11|Kmt2a|ENSMUSG00000002028.14|lysine (K)-specific methyltransferase 2A	ENSMUST00000128768.3|Kmt2a|ENSMUSG00000002028.14|lysine (K)-specific methyltransferase 2A
mm39_v1_chr10_-_81318489_81318559	0.0018456169087007505	UGUGCUU	ENSMUST00000120508.8|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5	ENSMUST00000238823.2|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5	ENSMUST00000118763.8|Celf5|ENSMUSG00000034818.18|CUGBP, Elav-like family member 5
mm39_v1_chr9_+_34400016_34400041	0.0017622170867228383	UGUGCUU	ENSMUST00000187625.7|Kirrel3|ENSMUSG00000032036.16|kirre like nephrin family adhesion molecule 3
mm39_v1_chr7_-_116042674_116042698	0.0013902777220986477	UGUGCUU	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr9_-_4796217_4796267	0.0012238311064502196	UGUGCUU	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr9_+_114517812_114517881	0.0010202027545129948	UGUGCUU	ENSMUST00000047404.7|Dync1li1|ENSMUSG00000032435.10|dynein cytoplasmic 1 light intermediate chain 1
mm39_v1_chr7_+_57069417_57069440	0.0010015965859214244	UGUGCUU	ENSMUST00000085240.11|Gabrb3|ENSMUSG00000033676.14|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm39_v1_chr1_-_83385911_83385943	0.0009701797793521056	UGUGCUU	ENSMUST00000160953.8|Sphkap|ENSMUSG00000026163.18|SPHK1 interactor, AKAP domain containing
mm39_v1_chr10_+_3690348_3690432	0.0009578759590334429	UGUGCUU	ENSMUST00000120274.8|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm39_v1_chr6_+_119456629_119456768	0.0008414260007545108	UGUGCUU	ENSMUST00000032094.7|Fbxl14|ENSMUSG00000030019.7|F-box and leucine-rich repeat protein 14
mm39_v1_chr17_-_52139693_52139706	0.00042885780330325816	UGUGCUU	ENSMUST00000144331.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr10_+_63079667_63079743	8.479440331460143e-05	UGUGCUU	ENSMUST00000020258.10|Herc4|ENSMUSG00000020064.10|hect domain and RLD 4	ENSMUST00000219577.2|Herc4|ENSMUSG00000020064.10|hect domain and RLD 4
