mm39_v1_chr3_-_50398027_50398063	0.3046045440612525	CAGUGCA	ENSMUST00000029297.6|Slc7a11|ENSMUSG00000027737.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	ENSMUST00000194462.6|Slc7a11|ENSMUSG00000027737.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm39_v1_chr18_+_84106188_84106305	0.2869542801121197	CAGUGCA	ENSMUST00000060223.4|Zadh2|ENSMUSG00000049090.4|zinc binding alcohol dehydrogenase, domain containing 2
mm39_v1_chr6_-_67014383_67014397	0.2741815667842279	CAGUGCA	ENSMUST00000043098.9|Gadd45a|ENSMUSG00000036390.9|growth arrest and DNA-damage-inducible 45 alpha
mm39_v1_chr11_+_52122836_52122873	0.2671473598326007	CAGUGCA	ENSMUST00000037324.12|Skp1|ENSMUSG00000036309.15|S-phase kinase-associated protein 1	ENSMUST00000166537.8|Skp1|ENSMUSG00000036309.15|S-phase kinase-associated protein 1
mm39_v1_chr8_-_85573489_85573563	0.25872661094456184	CAGUGCA	ENSMUST00000003912.7|Calr|ENSMUSG00000003814.9|calreticulin
mm39_v1_chr13_-_46118433_46118477	0.24990311351480027	CAGUGCA	ENSMUST00000167708.4|Atxn1|ENSMUSG00000046876.17|ataxin 1	ENSMUST00000091628.11|Atxn1|ENSMUSG00000046876.17|ataxin 1	ENSMUST00000180110.9|Atxn1|ENSMUSG00000046876.17|ataxin 1
mm39_v1_chr6_+_145692439_145692504	0.23748599980584575	CAGUGCA	ENSMUST00000111704.8|Rassf8|ENSMUSG00000030259.13|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm39_v1_chr11_-_87878301_87878364	0.23117925226907532	CAGUGCA	ENSMUST00000020775.9|Dynll2|ENSMUSG00000020483.15|dynein light chain LC8-type 2
mm39_v1_chr4_+_140427799_140427855	0.19879574143952375	CAGUGCA	ENSMUST00000071169.9|Rcc2|ENSMUSG00000040945.14|regulator of chromosome condensation 2
mm39_v1_chr1_-_16689660_16689713	0.189642619381674	CAGUGCA	ENSMUST00000117146.9|Ube2w|ENSMUSG00000025939.20|ubiquitin-conjugating enzyme E2W (putative)
mm39_v1_chr11_+_80367839_80367910	0.18791402703508395	CAGUGCA	ENSMUST00000053413.12|Cdk5r1|ENSMUSG00000048895.14|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	ENSMUST00000147694.2|Cdk5r1|ENSMUSG00000048895.14|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
mm39_v1_chr2_+_121244256_121244256	0.18280995493881144	CAGUGCA	ENSMUST00000028683.14|Pdia3|ENSMUSG00000027248.14|protein disulfide isomerase associated 3
mm39_v1_chr3_-_122413361_122413372	0.1818712163744882	CAGUGCA	ENSMUST00000239148.2|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162409.8|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like	ENSMUST00000162947.3|Fnbp1l|ENSMUSG00000039735.17|formin binding protein 1-like
mm39_v1_chrX_+_12454031_12454085	0.16706206915148844	CAGUGCA	ENSMUST00000033313.3|Atp6ap2|ENSMUSG00000031007.3|ATPase, H+ transporting, lysosomal accessory protein 2
mm39_v1_chr16_+_10884156_10884247	0.16551492665535553	CAGUGCA	ENSMUST00000089011.6|Snn|ENSMUSG00000037972.8|stannin
mm39_v1_chr2_+_91287846_91287894	0.1607213198171029	CAGUGCA	ENSMUST00000028689.4|Lrp4|ENSMUSG00000027253.16|low density lipoprotein receptor-related protein 4
mm39_v1_chr11_-_88742285_88742349	0.15952583482596877	CAGUGCA	ENSMUST00000107903.8|Akap1|ENSMUSG00000018428.16|A kinase (PRKA) anchor protein 1
mm39_v1_chr13_-_99027544_99027571	0.15782353197975377	CAGUGCA	ENSMUST00000109399.9|Tnpo1|ENSMUSG00000009470.18|transportin 1
mm39_v1_chr18_+_78392969_78392969	0.15537068927415454	CAGUGCA	ENSMUST00000164064.2|Gm6133|ENSMUSG00000090451.2|predicted gene 6133
mm39_v1_chr18_-_61533434_61533520	0.15493920934196806	CAGUGCA	ENSMUST00000063307.6|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta	ENSMUST00000075299.13|Ppargc1b|ENSMUSG00000033871.15|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm39_v1_chr11_-_76737794_76737871	0.1518743063305061	CAGUGCA	ENSMUST00000021201.6|Cpd|ENSMUSG00000020841.6|carboxypeptidase D
mm39_v1_chr1_+_127132712_127132788	0.1506956341164558	CAGUGCA	ENSMUST00000038361.11|Mgat5|ENSMUSG00000036155.14|mannoside acetylglucosaminyltransferase 5
mm39_v1_chr6_+_7844759_7844859	0.15041046611961162	CAGUGCA	ENSMUST00000040159.6|C1galt1|ENSMUSG00000042460.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm39_v1_chr16_+_30418535_30418552	0.14961862627204528	CAGUGCA	ENSMUST00000059078.4|Fam43a|ENSMUSG00000046546.4|family with sequence similarity 43, member A
mm39_v1_chr6_-_56878854_56878876	0.1478940634451248	CAGUGCA	ENSMUST00000101367.9|Nt5c3|ENSMUSG00000029780.15|5'-nucleotidase, cytosolic III
mm39_v1_chr2_+_131028861_131028891	0.14158599314461007	CAGUGCA	ENSMUST00000028804.15|Cdc25b|ENSMUSG00000027330.17|cell division cycle 25B	ENSMUST00000079857.9|Cdc25b|ENSMUSG00000027330.17|cell division cycle 25B
mm39_v1_chr8_-_48128164_48128201	0.13982251372535598	CAGUGCA	ENSMUST00000080353.3|Ing2|ENSMUSG00000063049.5|inhibitor of growth family, member 2
mm39_v1_chr19_+_8849000_8849054	0.13821774790009395	CAGUGCA	ENSMUST00000096255.7|Ubxn1|ENSMUSG00000071655.13|UBX domain protein 1
mm39_v1_chr18_+_73706115_73706115	0.1347721354473386	CAGUGCA	ENSMUST00000091852.5|Mex3c|ENSMUSG00000037253.9|mex3 RNA binding family member C
mm39_v1_chr13_-_56283331_56283444	0.13450602675420956	CAGUGCA	ENSMUST00000045788.9|Macroh2a1|ENSMUSG00000015937.16|macroH2A.1 histone	ENSMUST00000016081.13|Macroh2a1|ENSMUSG00000015937.16|macroH2A.1 histone
mm39_v1_chr10_-_119075910_119076002	0.13329412729272166	CAGUGCA	ENSMUST00000020315.13|Cand1|ENSMUSG00000020114.13|cullin associated and neddylation disassociated 1
mm39_v1_chr4_-_133746138_133746152	0.132315750658766	CAGUGCA	ENSMUST00000051674.3|Lin28a|ENSMUSG00000050966.10|lin-28 homolog A (C. elegans)
mm39_v1_chrX_-_141749704_141749730	0.13162084464108803	CAGUGCA	ENSMUST00000041317.3|Ammecr1|ENSMUSG00000042225.4|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm39_v1_chr2_+_163836880_163836880	0.13158188659828435	CAGUGCA	ENSMUST00000018470.10|Ywhab|ENSMUSG00000018326.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm39_v1_chr13_+_24985640_24985640	0.12646923259362855	CAGUGCA	ENSMUST00000019276.12|BC005537|ENSMUSG00000019132.12|cDNA sequence BC005537
mm39_v1_chrX_+_67722147_67722159	0.12503932809747603	CAGUGCA	ENSMUST00000088546.12|Fmr1|ENSMUSG00000000838.18|FMRP translational regulator 1
mm39_v1_chr5_+_32616187_32616312	0.12460645087895406	CAGUGCA	ENSMUST00000015100.15|Ppp1cb|ENSMUSG00000014956.16|protein phosphatase 1 catalytic subunit beta
mm39_v1_chr7_-_19043955_19043976	0.11984110749770438	CAGUGCA	ENSMUST00000207334.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000208505.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000207716.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000208326.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000003640.4|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B
mm39_v1_chrX_-_156275231_156275283	0.11754767596865923	CAGUGCA	ENSMUST00000112529.8|Sms|ENSMUSG00000071708.12|spermine synthase
mm39_v1_chrX_-_103457431_103457463	0.10988644134239792	CAGUGCA	ENSMUST00000033695.6|Abcb7|ENSMUSG00000031333.8|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm39_v1_chr15_-_79626719_79626763	0.1081898862562862	CAGUGCA	ENSMUST00000089311.11|Sun2|ENSMUSG00000042524.15|Sad1 and UNC84 domain containing 2	ENSMUST00000046259.14|Sun2|ENSMUSG00000042524.15|Sad1 and UNC84 domain containing 2
mm39_v1_chr5_-_123038329_123038438	0.1014474551130693	CAGUGCA	ENSMUST00000031435.14|Kdm2b|ENSMUSG00000029475.18|lysine (K)-specific demethylase 2B
mm39_v1_chr19_+_36903471_36903541	0.10113710976812801	CAGUGCA	ENSMUST00000099494.4|Btaf1|ENSMUSG00000040565.9|B-TFIID TATA-box binding protein associated factor 1
mm39_v1_chr11_+_69792642_69792720	0.10001119725487476	CAGUGCA	ENSMUST00000177138.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000108617.10|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000177476.8|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4	ENSMUST00000061837.11|Neurl4|ENSMUSG00000047284.15|neuralized E3 ubiquitin protein ligase 4
mm39_v1_chr14_-_45626237_45626418	0.09832891737675802	CAGUGCA	ENSMUST00000227865.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000226856.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000226276.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000046191.9|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1
mm39_v1_chr19_+_32734884_32734900	0.09755362606767813	CAGUGCA	ENSMUST00000013807.8|Pten|ENSMUSG00000013663.8|phosphatase and tensin homolog
mm39_v1_chr9_-_82857528_82857569	0.09749831148252985	CAGUGCA	ENSMUST00000034787.12|Phip|ENSMUSG00000032253.14|pleckstrin homology domain interacting protein
mm39_v1_chr4_+_150938376_150938525	0.0957394430806587	CAGUGCA	ENSMUST00000073600.9|Errfi1|ENSMUSG00000028967.11|ERBB receptor feedback inhibitor 1
mm39_v1_chr9_-_48747232_48747262	0.09566622510166496	CAGUGCA	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr5_+_76331727_76331817	0.09554402674156773	CAGUGCA	ENSMUST00000031144.14|Tmem165|ENSMUSG00000029234.14|transmembrane protein 165
mm39_v1_chr2_+_25070749_25070776	0.09457589237909418	CAGUGCA	ENSMUST00000104999.4|Nrarp|ENSMUSG00000078202.4|Notch-regulated ankyrin repeat protein
mm39_v1_chr3_+_51323383_51323465	0.09415151238394309	CAGUGCA	ENSMUST00000029303.13|Naa15|ENSMUSG00000063273.12|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm39_v1_chr9_-_36678868_36678975	0.09348721180331292	CAGUGCA	ENSMUST00000217599.2|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	ENSMUST00000120381.9|Stt3a|ENSMUSG00000032116.19|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm39_v1_chr18_+_44960813_44960813	0.09177804318334588	CAGUGCA	ENSMUST00000037763.11|Ythdc2|ENSMUSG00000034653.12|YTH domain containing 2
mm39_v1_chr8_-_47805383_47805401	0.09146334467740756	CAGUGCA	ENSMUST00000110367.10|Stox2|ENSMUSG00000038143.17|storkhead box 2
mm39_v1_chr9_+_86904067_86904134	0.09073178744699295	CAGUGCA	ENSMUST00000168529.9|Cyb5r4|ENSMUSG00000032872.17|cytochrome b5 reductase 4
mm39_v1_chr13_-_30170031_30170048	0.08943319707192499	CAGUGCA	ENSMUST00000102948.11|E2f3|ENSMUSG00000016477.19|E2F transcription factor 3
mm39_v1_chr6_+_108760025_108760096	0.08891874744503281	CAGUGCA	ENSMUST00000032196.9|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr11_-_49603501_49603555	0.08774084588346424	CAGUGCA	ENSMUST00000020624.7|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6	ENSMUST00000145353.8|Cnot6|ENSMUSG00000020362.14|CCR4-NOT transcription complex, subunit 6
mm39_v1_chr1_+_53336229_53336254	0.08665221449704018	CAGUGCA	ENSMUST00000027266.4|Ormdl1|ENSMUSG00000026097.10|ORM1-like 1 (S. cerevisiae)
mm39_v1_chr9_+_70586232_70586292	0.08631802276506001	CAGUGCA	ENSMUST00000067880.13|Adam10|ENSMUSG00000054693.15|a disintegrin and metallopeptidase domain 10
mm39_v1_chr15_+_76235503_76235537	0.08431030929687347	CAGUGCA	ENSMUST00000023212.15|Maf1|ENSMUSG00000022553.17|MAF1 homolog, negative regulator of RNA polymerase III	ENSMUST00000160172.8|Maf1|ENSMUSG00000022553.17|MAF1 homolog, negative regulator of RNA polymerase III
mm39_v1_chr11_-_20781009_20781056	0.08293579033097234	CAGUGCA	ENSMUST00000047028.9|Lgalsl|ENSMUSG00000042363.15|lectin, galactoside binding-like
mm39_v1_chr9_+_44516140_44516218	0.08184659688048594	CAGUGCA	ENSMUST00000170489.2|Ddx6|ENSMUSG00000032097.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	ENSMUST00000217034.2|Ddx6|ENSMUSG00000032097.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm39_v1_chr1_-_181669891_181669949	0.08171205558211365	CAGUGCA	ENSMUST00000193028.2|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000191878.6|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000005003.12|Lbr|ENSMUSG00000004880.12|lamin B receptor
mm39_v1_chr8_+_80366247_80366333	0.0811575779228017	CAGUGCA	ENSMUST00000173078.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4	ENSMUST00000173286.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4
mm39_v1_chr18_+_14916295_14916316	0.08114923472707089	CAGUGCA	ENSMUST00000234789.2|Taf4b|ENSMUSG00000054321.8|TATA-box binding protein associated factor 4b	ENSMUST00000169862.2|Taf4b|ENSMUSG00000054321.8|TATA-box binding protein associated factor 4b
mm39_v1_chr9_+_74944896_74944983	0.08083715423115839	CAGUGCA	ENSMUST00000168166.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000169492.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19	ENSMUST00000170308.8|Arpp19|ENSMUSG00000007656.14|cAMP-regulated phosphoprotein 19
mm39_v1_chr7_-_117728815_117728885	0.08060492830192284	CAGUGCA	ENSMUST00000032888.10|Arl6ip1|ENSMUSG00000030654.10|ADP-ribosylation factor-like 6 interacting protein 1
mm39_v1_chr2_+_156038562_156038695	0.08053747772944246	CAGUGCA	ENSMUST00000037401.10|Phf20|ENSMUSG00000038116.17|PHD finger protein 20
mm39_v1_chr17_-_66756710_66756753	0.08012608298070956	CAGUGCA	ENSMUST00000086693.12|Mtcl1|ENSMUSG00000052105.18|microtubule crosslinking factor 1	ENSMUST00000097291.10|Mtcl1|ENSMUSG00000052105.18|microtubule crosslinking factor 1
mm39_v1_chr5_-_52347826_52347869	0.07871273970434699	CAGUGCA	ENSMUST00000199321.5|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15	ENSMUST00000195922.2|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15	ENSMUST00000031061.12|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm39_v1_chr1_-_182169150_182169190	0.07796781169758539	CAGUGCA	ENSMUST00000051431.10|Fbxo28|ENSMUSG00000047539.10|F-box protein 28
mm39_v1_chr1_-_37580084_37580128	0.07719836294183205	CAGUGCA	ENSMUST00000151952.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr2_+_14078896_14078954	0.07682840413457856	CAGUGCA	ENSMUST00000102960.11|Stam|ENSMUSG00000026718.18|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm39_v1_chr4_+_118965908_118965955	0.07637729126473734	CAGUGCA	ENSMUST00000030398.10|Slc2a1|ENSMUSG00000028645.12|solute carrier family 2 (facilitated glucose transporter), member 1
mm39_v1_chr18_+_69478790_69478882	0.07607356588732678	CAGUGCA	ENSMUST00000202116.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114982.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000078486.13|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202772.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201288.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr1_+_82817170_82817239	0.07567819968241615	CAGUGCA	ENSMUST00000189220.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000113444.8|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr11_-_61470462_61470533	0.07566239213178998	CAGUGCA	ENSMUST00000147501.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000146455.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000108711.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000108712.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000001063.15|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000108713.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000179936.8|Epn2|ENSMUSG00000001036.18|epsin 2	ENSMUST00000178202.8|Epn2|ENSMUSG00000001036.18|epsin 2
mm39_v1_chr7_+_120276801_120276868	0.07553692364593252	CAGUGCA	ENSMUST00000208454.2|Mosmo|ENSMUSG00000046096.8|modulator of smoothened	ENSMUST00000060175.8|Mosmo|ENSMUSG00000046096.8|modulator of smoothened
mm39_v1_chr19_-_11796282_11796329	0.07454388041137307	CAGUGCA	ENSMUST00000069285.6|Stx3|ENSMUSG00000041488.17|syntaxin 3
mm39_v1_chr4_-_129271909_129271909	0.07373054225306003	CAGUGCA	ENSMUST00000030610.3|Zbtb8a|ENSMUSG00000028807.3|zinc finger and BTB domain containing 8a
mm39_v1_chr9_-_20871081_20871184	0.07255065290969175	CAGUGCA	ENSMUST00000177754.9|Dnmt1|ENSMUSG00000004099.17|DNA methyltransferase (cytosine-5) 1
mm39_v1_chr6_-_71417607_71417630	0.07157622307717895	CAGUGCA	ENSMUST00000002292.15|Rmnd5a|ENSMUSG00000002222.15|required for meiotic nuclear division 5 homolog A
mm39_v1_chr14_-_47805861_47805896	0.07055788476540047	CAGUGCA	ENSMUST00000228784.2|Atg14|ENSMUSG00000037526.8|autophagy related 14	ENSMUST00000042988.7|Atg14|ENSMUSG00000037526.8|autophagy related 14
mm39_v1_chr11_+_90140294_90140312	0.07016493607097556	CAGUGCA	ENSMUST00000004050.7|Mmd|ENSMUSG00000003948.18|monocyte to macrophage differentiation-associated
mm39_v1_chr17_-_26727437_26727493	0.06887576522921943	CAGUGCA	ENSMUST00000236661.2|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1	ENSMUST00000025025.7|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1
mm39_v1_chr6_+_143112936_143113026	0.06829777920807864	CAGUGCA	ENSMUST00000204947.3|Etnk1|ENSMUSG00000030275.7|ethanolamine kinase 1	ENSMUST00000032413.7|Etnk1|ENSMUSG00000030275.7|ethanolamine kinase 1	ENSMUST00000205256.2|Etnk1|ENSMUSG00000030275.7|ethanolamine kinase 1
mm39_v1_chr8_+_122457302_122457329	0.06737854053532659	CAGUGCA	ENSMUST00000026357.12|Jph3|ENSMUSG00000025318.14|junctophilin 3
mm39_v1_chr10_-_86541349_86541373	0.0671092737113689	CAGUGCA	ENSMUST00000020238.14|Hsp90b1|ENSMUSG00000020048.14|heat shock protein 90, beta (Grp94), member 1
mm39_v1_chr19_+_42078859_42078939	0.06637992440615507	CAGUGCA	ENSMUST00000235932.2|Pi4k2a|ENSMUSG00000025178.10|phosphatidylinositol 4-kinase type 2 alpha	ENSMUST00000066778.6|Pi4k2a|ENSMUSG00000025178.10|phosphatidylinositol 4-kinase type 2 alpha
mm39_v1_chr8_+_3565377_3565397	0.06511674688255571	CAGUGCA	ENSMUST00000111070.4|Pnpla6|ENSMUSG00000004565.16|patatin-like phospholipase domain containing 6	ENSMUST00000004681.14|Pnpla6|ENSMUSG00000004565.16|patatin-like phospholipase domain containing 6	ENSMUST00000208310.2|Pnpla6|ENSMUSG00000004565.16|patatin-like phospholipase domain containing 6
mm39_v1_chr10_+_4561974_4562075	0.06488182270580592	CAGUGCA	ENSMUST00000105590.8|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)	ENSMUST00000067086.14|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)
mm39_v1_chr10_-_128425519_128425542	0.06452819163075313	CAGUGCA	ENSMUST00000082059.7|Erbb3|ENSMUSG00000018166.9|erb-b2 receptor tyrosine kinase 3
mm39_v1_chr6_-_97125817_97125896	0.06319556591936376	CAGUGCA	ENSMUST00000204331.3|Eogt|ENSMUSG00000035245.13|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase	ENSMUST00000142116.2|Eogt|ENSMUSG00000035245.13|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase	ENSMUST00000113387.8|Eogt|ENSMUSG00000035245.13|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
mm39_v1_chr13_-_38178059_38178193	0.060961888611330596	CAGUGCA	ENSMUST00000225319.2|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha	ENSMUST00000225246.2|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha	ENSMUST00000021864.8|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha
mm39_v1_chr19_-_44095840_44095941	0.06001675760363124	CAGUGCA	ENSMUST00000119591.2|Chuk|ENSMUSG00000025199.17|conserved helix-loop-helix ubiquitous kinase	ENSMUST00000026217.11|Chuk|ENSMUSG00000025199.17|conserved helix-loop-helix ubiquitous kinase
mm39_v1_chr11_-_90281721_90281753	0.05977924193665237	CAGUGCA	ENSMUST00000004051.8|Hlf|ENSMUSG00000003949.17|hepatic leukemia factor
mm39_v1_chr14_-_63781381_63781440	0.05928807243603761	CAGUGCA	ENSMUST00000058679.7|Mtmr9|ENSMUSG00000035078.7|myotubularin related protein 9
mm39_v1_chr4_-_126427234_126427272	0.05895816883454277	CAGUGCA	ENSMUST00000084289.5|Ago4|ENSMUSG00000042500.12|argonaute RISC catalytic subunit 4
mm39_v1_chr7_+_46445512_46445558	0.058584689348960946	CAGUGCA	ENSMUST00000006774.11|Gtf2h1|ENSMUSG00000006599.14|general transcription factor II H, polypeptide 1	ENSMUST00000165031.8|Gtf2h1|ENSMUSG00000006599.14|general transcription factor II H, polypeptide 1
mm39_v1_chr11_-_50216426_50216500	0.05858317006443772	CAGUGCA	ENSMUST00000179865.8|Canx|ENSMUSG00000020368.16|calnexin	ENSMUST00000020637.9|Canx|ENSMUSG00000020368.16|calnexin
mm39_v1_chr16_+_56942050_56942066	0.05852368913747107	CAGUGCA	ENSMUST00000166897.3|Tomm70a|ENSMUSG00000022752.10|translocase of outer mitochondrial membrane 70A
mm39_v1_chr2_+_152068729_152068828	0.057662262498091935	CAGUGCA	ENSMUST00000099224.10|Csnk2a1|ENSMUSG00000074698.11|casein kinase 2, alpha 1 polypeptide	ENSMUST00000124791.8|Csnk2a1|ENSMUSG00000074698.11|casein kinase 2, alpha 1 polypeptide	ENSMUST00000133119.2|Csnk2a1|ENSMUSG00000074698.11|casein kinase 2, alpha 1 polypeptide
mm39_v1_chr11_+_120123727_120123779	0.05611845832464374	CAGUGCA	ENSMUST00000122148.8|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1	ENSMUST00000044985.14|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1
mm39_v1_chr15_+_5173342_5173379	0.055131058679428344	CAGUGCA	ENSMUST00000051186.9|Prkaa1|ENSMUSG00000050697.10|protein kinase, AMP-activated, alpha 1 catalytic subunit	ENSMUST00000228218.2|Prkaa1|ENSMUSG00000050697.10|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm39_v1_chr6_+_97783975_97784028	0.05500669756993491	CAGUGCA	ENSMUST00000203884.3|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000043637.14|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr17_-_66826661_66826724	0.054965751018680634	CAGUGCA	ENSMUST00000167962.2|Rab12|ENSMUSG00000023460.14|RAB12, member RAS oncogene family	ENSMUST00000070538.12|Rab12|ENSMUSG00000023460.14|RAB12, member RAS oncogene family
mm39_v1_chr5_-_73805063_73805133	0.05491194340943068	CAGUGCA	ENSMUST00000081170.9|Sgcb|ENSMUSG00000029156.12|sarcoglycan, beta (dystrophin-associated glycoprotein)
mm39_v1_chr1_+_6557455_6557563	0.05258939374029246	CAGUGCA	ENSMUST00000140079.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000131494.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr11_+_78079243_78079311	0.050863042490372025	CAGUGCA	ENSMUST00000002128.14|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family	ENSMUST00000150941.8|Rab34|ENSMUSG00000002059.19|RAB34, member RAS oncogene family
mm39_v1_chr3_+_34074048_34074092	0.04827109778360066	CAGUGCA	ENSMUST00000001620.13|Fxr1|ENSMUSG00000027680.16|fragile X mental retardation gene 1, autosomal homolog
mm39_v1_chr10_+_127919142_127919183	0.046602308967627085	CAGUGCA	ENSMUST00000026459.6|Atp5b|ENSMUSG00000025393.13|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm39_v1_chr12_-_27392356_27392573	0.04376364932020696	CAGUGCA	ENSMUST00000079063.7|Sox11|ENSMUSG00000063632.7|SRY (sex determining region Y)-box 11
mm39_v1_chr16_-_85698679_85698716	0.04312641639032832	CAGUGCA	ENSMUST00000023611.7|Adamts5|ENSMUSG00000022894.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm39_v1_chr16_+_64672334_64672437	0.04293830015901283	CAGUGCA	ENSMUST00000067744.8|Cggbp1|ENSMUSG00000054604.8|CGG triplet repeat binding protein 1
mm39_v1_chr4_+_14864076_14864147	0.042776646502563596	CAGUGCA	ENSMUST00000029875.4|Pip4p2|ENSMUSG00000028221.4|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2
mm39_v1_chr1_-_119349969_119350021	0.04274767168858178	CAGUGCA	ENSMUST00000038765.6|Inhbb|ENSMUSG00000037035.6|inhibin beta-B
mm39_v1_chr4_+_116078830_116078872	0.04274317897001903	CAGUGCA	ENSMUST00000030464.14|Pik3r3|ENSMUSG00000028698.14|phosphoinositide-3-kinase regulatory subunit 3
mm39_v1_chr3_-_107667499_107667572	0.041940485448467076	CAGUGCA	ENSMUST00000153114.2|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)	ENSMUST00000118593.8|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)	ENSMUST00000120243.8|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)
mm39_v1_chr7_-_109351399_109351497	0.04092474313903559	CAGUGCA	ENSMUST00000128043.2|Tmem9b|ENSMUSG00000031021.14|TMEM9 domain family, member B	ENSMUST00000033333.13|Tmem9b|ENSMUSG00000031021.14|TMEM9 domain family, member B
mm39_v1_chr19_-_44058175_44058226	0.04007100619733444	CAGUGCA	ENSMUST00000172041.8|Erlin1|ENSMUSG00000025198.17|ER lipid raft associated 1	ENSMUST00000071698.13|Erlin1|ENSMUSG00000025198.17|ER lipid raft associated 1	ENSMUST00000112028.10|Erlin1|ENSMUSG00000025198.17|ER lipid raft associated 1
mm39_v1_chr10_+_67373691_67373760	0.039500282744656334	CAGUGCA	ENSMUST00000048289.14|Egr2|ENSMUSG00000037868.16|early growth response 2	ENSMUST00000130933.2|Egr2|ENSMUSG00000037868.16|early growth response 2	ENSMUST00000105438.9|Egr2|ENSMUSG00000037868.16|early growth response 2	ENSMUST00000146986.2|Egr2|ENSMUSG00000037868.16|early growth response 2
mm39_v1_chr9_+_58536386_58536393	0.03927538449597396	CAGUGCA	ENSMUST00000176250.2|Nptn|ENSMUSG00000032336.18|neuroplastin
mm39_v1_chr19_-_18609118_18609190	0.03887325811749067	CAGUGCA	ENSMUST00000025631.7|Ostf1|ENSMUSG00000024725.14|osteoclast stimulating factor 1	ENSMUST00000236615.2|Ostf1|ENSMUSG00000024725.14|osteoclast stimulating factor 1
mm39_v1_chr9_-_119151428_119151517	0.038410423504699906	CAGUGCA	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr9_+_57615816_57615891	0.03834661471802551	CAGUGCA	ENSMUST00000043990.14|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3	ENSMUST00000142807.2|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3
mm39_v1_chr8_+_111448092_111448118	0.037326584709819345	CAGUGCA	ENSMUST00000052457.15|Mtss2|ENSMUSG00000033763.15|MTSS I-BAR domain containing 2
mm39_v1_chr15_-_77191079_77191128	0.036978069001137384	CAGUGCA	ENSMUST00000171751.10|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr1_-_54233207_54233207	0.036768062092919385	CAGUGCA	ENSMUST00000120904.8|Hecw2|ENSMUSG00000042807.16|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr5_-_124563969_124564011	0.03644607255850539	CAGUGCA	ENSMUST00000065263.12|Sbno1|ENSMUSG00000038095.16|strawberry notch 1
mm39_v1_chrX_-_52459347_52459379	0.035488903857652875	CAGUGCA	ENSMUST00000096447.9|Mospd1|ENSMUSG00000023074.12|motile sperm domain containing 1	ENSMUST00000023836.4|Mospd1|ENSMUSG00000023074.12|motile sperm domain containing 1
mm39_v1_chr11_-_109364424_109364504	0.0346056032358719	CAGUGCA	ENSMUST00000070152.12|Slc16a6|ENSMUSG00000041920.15|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm39_v1_chr9_+_106048116_106048153	0.034480280049103265	CAGUGCA	ENSMUST00000020490.13|Wdr82|ENSMUSG00000020257.14|WD repeat domain containing 82
mm39_v1_chr12_-_119202527_119202599	0.034260981288166896	CAGUGCA	ENSMUST00000026360.9|Itgb8|ENSMUSG00000025321.15|integrin beta 8
mm39_v1_chr3_-_9675130_9675146	0.03348117538372872	CAGUGCA	ENSMUST00000041124.13|Zfp704|ENSMUSG00000040209.13|zinc finger protein 704
mm39_v1_chr5_+_101912939_101913014	0.03317219441853085	CAGUGCA	ENSMUST00000031273.9|Cds1|ENSMUSG00000029330.9|CDP-diacylglycerol synthase 1
mm39_v1_chr8_-_11362731_11362826	0.03314188166738962	CAGUGCA	ENSMUST00000033898.10|Col4a1|ENSMUSG00000031502.12|collagen, type IV, alpha 1
mm39_v1_chr10_+_106306122_106306228	0.032746376459015535	CAGUGCA	ENSMUST00000029404.17|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	ENSMUST00000217854.2|Ppfia2|ENSMUSG00000053825.16|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm39_v1_chr4_+_8691303_8691381	0.032701421499208225	CAGUGCA	ENSMUST00000051558.10|Chd7|ENSMUSG00000041235.13|chromodomain helicase DNA binding protein 7
mm39_v1_chr7_-_37806912_37806959	0.03249749600549892	CAGUGCA	ENSMUST00000108023.10|Ccne1|ENSMUSG00000002068.17|cyclin E1
mm39_v1_chr4_-_126362372_126362446	0.03234952735193319	CAGUGCA	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr18_+_76374651_76374804	0.03197043232918004	CAGUGCA	ENSMUST00000168423.9|Smad2|ENSMUSG00000024563.17|SMAD family member 2	ENSMUST00000091831.13|Smad2|ENSMUSG00000024563.17|SMAD family member 2
mm39_v1_chrX_-_160942713_160942728	0.03161433865003976	CAGUGCA	ENSMUST00000087085.10|Nhs|ENSMUSG00000059493.14|NHS actin remodeling regulator
mm39_v1_chr6_-_13677928_13677974	0.031291173374183336	CAGUGCA	ENSMUST00000203078.2|Bmt2|ENSMUSG00000042742.8|base methyltransferase of 25S rRNA 2	ENSMUST00000045235.8|Bmt2|ENSMUSG00000042742.8|base methyltransferase of 25S rRNA 2
mm39_v1_chr16_-_50252703_50252772	0.0311075391584448	CAGUGCA	ENSMUST00000066037.13|Bbx|ENSMUSG00000022641.16|bobby sox HMG box containing	ENSMUST00000089399.11|Bbx|ENSMUSG00000022641.16|bobby sox HMG box containing	ENSMUST00000089404.10|Bbx|ENSMUSG00000022641.16|bobby sox HMG box containing	ENSMUST00000138166.8|Bbx|ENSMUSG00000022641.16|bobby sox HMG box containing
mm39_v1_chr7_+_73025243_73025299	0.03059606679611434	CAGUGCA	ENSMUST00000119206.3|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A	ENSMUST00000094312.12|Rgma|ENSMUSG00000070509.16|repulsive guidance molecule family member A
mm39_v1_chr2_-_104324745_104324809	0.0302663655665884	CAGUGCA	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr14_-_47059694_47059743	0.030069333806204045	CAGUGCA	ENSMUST00000111817.8|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta	ENSMUST00000079314.12|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta
mm39_v1_chr7_-_4661980_4662031	0.030023669947032282	CAGUGCA	ENSMUST00000205374.2|Ppp6r1|ENSMUSG00000052296.8|protein phosphatase 6, regulatory subunit 1	ENSMUST00000064099.8|Ppp6r1|ENSMUSG00000052296.8|protein phosphatase 6, regulatory subunit 1
mm39_v1_chr6_-_72593983_72593983	0.0297549780226868	CAGUGCA	ENSMUST00000070524.5|Tgoln1|ENSMUSG00000056429.5|trans-golgi network protein
mm39_v1_chr7_-_34089109_34089120	0.029334659695974197	CAGUGCA	ENSMUST00000085585.12|Lsm14a|ENSMUSG00000066568.13|LSM14A mRNA processing body assembly factor
mm39_v1_chr11_-_120515799_120515840	0.029085479780313745	CAGUGCA	ENSMUST00000106183.3|Sirt7|ENSMUSG00000025138.15|sirtuin 7	ENSMUST00000080202.12|Sirt7|ENSMUSG00000025138.15|sirtuin 7
mm39_v1_chr16_+_35803674_35803765	0.028877648763147752	CAGUGCA	ENSMUST00000004054.13|Kpna1|ENSMUSG00000022905.13|karyopherin (importin) alpha 1
mm39_v1_chr7_+_18659787_18659826	0.028622188463182856	CAGUGCA	ENSMUST00000032571.10|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2	ENSMUST00000220302.2|Nova2|ENSMUSG00000030411.17|NOVA alternative splicing regulator 2
mm39_v1_chr1_+_187730018_187730031	0.028251703614028817	CAGUGCA	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr17_-_31877703_31877866	0.028060785929315248	CAGUGCA	ENSMUST00000236475.2|U2af1|ENSMUSG00000061613.14|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	ENSMUST00000166526.9|U2af1|ENSMUSG00000061613.14|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	ENSMUST00000014684.6|U2af1|ENSMUSG00000061613.14|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
mm39_v1_chr6_-_92683136_92683277	0.026811148016819508	CAGUGCA	ENSMUST00000032093.12|Prickle2|ENSMUSG00000030020.14|prickle planar cell polarity protein 2
mm39_v1_chr12_-_73160181_73160230	0.026679134494053226	CAGUGCA	ENSMUST00000043208.8|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4	ENSMUST00000175693.3|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4
mm39_v1_chr3_-_104960437_104960467	0.02629661419968274	CAGUGCA	ENSMUST00000077548.12|Cttnbp2nl|ENSMUSG00000062127.12|CTTNBP2 N-terminal like
mm39_v1_chr8_+_121811091_121811125	0.026005150302457855	CAGUGCA	ENSMUST00000181504.2|Foxf1|ENSMUSG00000042812.6|forkhead box F1
mm39_v1_chr1_+_156386414_156386619	0.025732176862477883	CAGUGCA	ENSMUST00000166172.9|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	ENSMUST00000027888.13|Abl2|ENSMUSG00000026596.14|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm39_v1_chr1_-_170042947_170042989	0.02568646439946935	CAGUGCA	ENSMUST00000027979.14|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1	ENSMUST00000123399.2|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1
mm39_v1_chr5_+_124045238_124045260	0.025252778038128948	CAGUGCA	ENSMUST00000023869.15|Denr|ENSMUSG00000023106.16|density-regulated protein
mm39_v1_chr4_-_110144676_110144731	0.02524798271084688	CAGUGCA	ENSMUST00000106598.8|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4	ENSMUST00000102723.11|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4	ENSMUST00000153906.2|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4
mm39_v1_chr7_+_111622675_111622775	0.02480751129480508	CAGUGCA	ENSMUST00000106653.4|Usp47|ENSMUSG00000059263.10|ubiquitin specific peptidase 47	ENSMUST00000215510.2|Usp47|ENSMUSG00000059263.10|ubiquitin specific peptidase 47	ENSMUST00000210309.2|Usp47|ENSMUSG00000059263.10|ubiquitin specific peptidase 47
mm39_v1_chr3_-_36626101_36626299	0.024805614318050888	CAGUGCA	ENSMUST00000029270.10|Ccna2|ENSMUSG00000027715.10|cyclin A2
mm39_v1_chr13_-_69147639_69147684	0.024785663838101102	CAGUGCA	ENSMUST00000022013.8|Adcy2|ENSMUSG00000021536.8|adenylate cyclase 2
mm39_v1_chr3_+_89344006_89344068	0.024728311168902208	CAGUGCA	ENSMUST00000038942.10|Pbxip1|ENSMUSG00000042613.10|pre B cell leukemia transcription factor interacting protein 1	ENSMUST00000130858.8|Pbxip1|ENSMUSG00000042613.10|pre B cell leukemia transcription factor interacting protein 1	ENSMUST00000146630.8|Pbxip1|ENSMUSG00000042613.10|pre B cell leukemia transcription factor interacting protein 1	ENSMUST00000145753.2|Pbxip1|ENSMUSG00000042613.10|pre B cell leukemia transcription factor interacting protein 1
mm39_v1_chr3_-_84489783_84489841	0.024439955873668925	CAGUGCA	ENSMUST00000107687.9|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1	ENSMUST00000098990.10|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1
mm39_v1_chr1_-_97589675_97589799	0.024070935294215893	CAGUGCA	ENSMUST00000053033.14|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator	ENSMUST00000149927.2|Macir|ENSMUSG00000044768.17|macrophage immunometabolism regulator
mm39_v1_chr11_-_106050927_106050994	0.023155405433986743	CAGUGCA	ENSMUST00000045923.10|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr2_+_145009625_145009693	0.023010350512163477	CAGUGCA	ENSMUST00000110007.8|Slc24a3|ENSMUSG00000063873.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm39_v1_chrX_-_103024847_103024893	0.022679326743873938	CAGUGCA	ENSMUST00000121153.8|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting	ENSMUST00000070705.6|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting
mm39_v1_chr18_-_46730547_46730610	0.02167655408954174	CAGUGCA	ENSMUST00000151189.2|Tmed7|ENSMUSG00000033184.15|transmembrane p24 trafficking protein 7
mm39_v1_chr15_-_98676007_98676031	0.021656124751951996	CAGUGCA	ENSMUST00000226655.2|Wnt10b|ENSMUSG00000022996.16|wingless-type MMTV integration site family, member 10B	ENSMUST00000228546.2|Wnt10b|ENSMUSG00000022996.16|wingless-type MMTV integration site family, member 10B	ENSMUST00000023732.12|Wnt10b|ENSMUSG00000022996.16|wingless-type MMTV integration site family, member 10B	ENSMUST00000226610.2|Wnt10b|ENSMUSG00000022996.16|wingless-type MMTV integration site family, member 10B
mm39_v1_chr17_+_75312520_75312563	0.02117009588681105	CAGUGCA	ENSMUST00000234490.2|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1	ENSMUST00000001927.12|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr1_-_22031718_22031805	0.020066138115329334	CAGUGCA	ENSMUST00000029667.13|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173058.8|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173404.2|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5
mm39_v1_chr7_-_112968533_112968602	0.020035598046936477	CAGUGCA	ENSMUST00000047091.14|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10	ENSMUST00000119278.8|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10
mm39_v1_chr19_-_7460600_7460651	0.01983768439875748	CAGUGCA	ENSMUST00000235593.2|Rtn3|ENSMUSG00000024758.16|reticulon 3	ENSMUST00000088171.12|Rtn3|ENSMUSG00000024758.16|reticulon 3	ENSMUST00000065304.13|Rtn3|ENSMUSG00000024758.16|reticulon 3	ENSMUST00000025667.14|Rtn3|ENSMUSG00000024758.16|reticulon 3
mm39_v1_chr16_-_74208180_74208314	0.019056761419375196	CAGUGCA	ENSMUST00000117200.8|Robo2|ENSMUSG00000052516.20|roundabout guidance receptor 2
mm39_v1_chr2_+_106523532_106523624	0.0181995693931792	CAGUGCA	ENSMUST00000111063.8|Mpped2|ENSMUSG00000016386.16|metallophosphoesterase domain containing 2
mm39_v1_chr13_+_20274708_20274803	0.01813975380625017	CAGUGCA	ENSMUST00000072519.7|Elmo1|ENSMUSG00000041112.18|engulfment and cell motility 1
mm39_v1_chr7_-_33929708_33929761	0.017462032582846707	CAGUGCA	ENSMUST00000038027.6|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chr11_-_4696778_4696778	0.017064584151703553	CAGUGCA	ENSMUST00000009219.3|Cabp7|ENSMUSG00000009075.3|calcium binding protein 7
mm39_v1_chr13_+_46571910_46571986	0.017002901515887226	CAGUGCA	ENSMUST00000037923.5|Rbm24|ENSMUSG00000038132.7|RNA binding motif protein 24
mm39_v1_chr3_-_116217579_116217681	0.016437471092320848	CAGUGCA	ENSMUST00000106491.7|Cdc14a|ENSMUSG00000033502.16|CDC14 cell division cycle 14A	ENSMUST00000090464.7|Cdc14a|ENSMUSG00000033502.16|CDC14 cell division cycle 14A
mm39_v1_chrX_-_165992311_165992475	0.01620255720727569	CAGUGCA	ENSMUST00000112172.4|Tmsb4x|ENSMUSG00000049775.17|thymosin, beta 4, X chromosome
mm39_v1_chr8_-_8711211_8711250	0.01587425643003029	CAGUGCA	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr19_+_59446804_59446883	0.015845914188149186	CAGUGCA	ENSMUST00000062216.4|Emx2|ENSMUSG00000043969.5|empty spiracles homeobox 2
mm39_v1_chr4_+_138700195_138700231	0.01564890496123425	CAGUGCA	ENSMUST00000123636.8|Tmco4|ENSMUSG00000041143.17|transmembrane and coiled-coil domains 4	ENSMUST00000043042.10|Tmco4|ENSMUSG00000041143.17|transmembrane and coiled-coil domains 4	ENSMUST00000050949.9|Tmco4|ENSMUSG00000041143.17|transmembrane and coiled-coil domains 4
mm39_v1_chr10_-_43050516_43050565	0.015169929956195875	CAGUGCA	ENSMUST00000040275.9|Sobp|ENSMUSG00000038248.9|sine oculis binding protein
mm39_v1_chr11_+_115714853_115714923	0.015164251016201039	CAGUGCA	ENSMUST00000103032.11|Llgl2|ENSMUSG00000020782.19|LLGL2 scribble cell polarity complex component	ENSMUST00000133250.8|Llgl2|ENSMUSG00000020782.19|LLGL2 scribble cell polarity complex component	ENSMUST00000177736.8|Llgl2|ENSMUSG00000020782.19|LLGL2 scribble cell polarity complex component
mm39_v1_chr3_+_151916059_151916102	0.015140354193550599	CAGUGCA	ENSMUST00000166984.8|Fubp1|ENSMUSG00000028034.16|far upstream element (FUSE) binding protein 1
mm39_v1_chr15_+_40518414_40518450	0.01513161328954774	CAGUGCA	ENSMUST00000053467.6|Zfpm2|ENSMUSG00000022306.10|zinc finger protein, multitype 2
mm39_v1_chr11_+_97554192_97554240	0.015098219644757754	CAGUGCA	ENSMUST00000044730.12|Mllt6|ENSMUSG00000038437.12|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
mm39_v1_chr5_-_24745436_24745590	0.014861033623384482	CAGUGCA	ENSMUST00000048302.13|Asb10|ENSMUSG00000038204.14|ankyrin repeat and SOCS box-containing 10	ENSMUST00000119657.2|Asb10|ENSMUSG00000038204.14|ankyrin repeat and SOCS box-containing 10
mm39_v1_chr6_-_72357398_72357472	0.014809743587710445	CAGUGCA	ENSMUST00000101285.10|Vamp5|ENSMUSG00000073002.10|vesicle-associated membrane protein 5	ENSMUST00000074231.6|Vamp5|ENSMUSG00000073002.10|vesicle-associated membrane protein 5
mm39_v1_chr16_-_8610165_8610190	0.014661506851742855	CAGUGCA	ENSMUST00000160405.8|Usp7|ENSMUSG00000022710.18|ubiquitin specific peptidase 7
mm39_v1_chr8_+_112263255_112263272	0.014284562629717334	CAGUGCA	ENSMUST00000171182.8|Znrf1|ENSMUSG00000033545.15|zinc and ring finger 1	ENSMUST00000168428.8|Znrf1|ENSMUSG00000033545.15|zinc and ring finger 1
mm39_v1_chr8_-_114575247_114575406	0.014274375466021054	CAGUGCA	ENSMUST00000093113.5|Adamts18|ENSMUSG00000053399.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm39_v1_chr3_-_72965136_72965136	0.01415464697121443	CAGUGCA	ENSMUST00000059407.9|Slitrk3|ENSMUSG00000048304.9|SLIT and NTRK-like family, member 3
mm39_v1_chr3_-_115508680_115508721	0.01409407266282224	CAGUGCA	ENSMUST00000055676.4|S1pr1|ENSMUSG00000045092.9|sphingosine-1-phosphate receptor 1
mm39_v1_chr2_-_59955995_59956119	0.01396225065372625	CAGUGCA	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr7_-_46658144_46658169	0.0137707394481532	CAGUGCA	ENSMUST00000061639.10|Spty2d1|ENSMUSG00000049516.10|SPT2 chromatin protein domain containing 1
mm39_v1_chr3_+_152052102_152052172	0.012812281178365071	CAGUGCA	ENSMUST00000117492.9|Usp33|ENSMUSG00000025437.16|ubiquitin specific peptidase 33	ENSMUST00000026507.13|Usp33|ENSMUSG00000025437.16|ubiquitin specific peptidase 33	ENSMUST00000197748.5|Usp33|ENSMUSG00000025437.16|ubiquitin specific peptidase 33
mm39_v1_chr1_+_132345293_132345348	0.012695019309439958	CAGUGCA	ENSMUST00000045110.14|Dstyk|ENSMUSG00000042046.16|dual serine/threonine and tyrosine protein kinase	ENSMUST00000188389.2|Dstyk|ENSMUSG00000042046.16|dual serine/threonine and tyrosine protein kinase
mm39_v1_chr16_-_9812410_9812446	0.012616453449273288	CAGUGCA	ENSMUST00000115835.8|Grin2a|ENSMUSG00000059003.13|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm39_v1_chr3_-_95189387_95189387	0.012516803462868747	CAGUGCA	ENSMUST00000015855.8|Prune1|ENSMUSG00000015711.9|prune exopolyphosphatase
mm39_v1_chr12_+_76417040_76417040	0.012406899117189812	CAGUGCA	ENSMUST00000042779.4|Zbtb1|ENSMUSG00000033454.7|zinc finger and BTB domain containing 1
mm39_v1_chr7_-_132454332_132454402	0.012212856945544963	CAGUGCA	ENSMUST00000120425.8|Eef1akmt2|ENSMUSG00000030960.17|EEF1A lysine methyltransferase 2	ENSMUST00000033257.15|Eef1akmt2|ENSMUSG00000030960.17|EEF1A lysine methyltransferase 2
mm39_v1_chr3_+_105359641_105359688	0.012047306672986086	CAGUGCA	ENSMUST00000098761.10|Kcnd3|ENSMUSG00000040896.17|potassium voltage-gated channel, Shal-related family, member 3
mm39_v1_chr4_-_91260265_91260306	0.012037658508412059	CAGUGCA	ENSMUST00000107110.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000008633.15|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000107118.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr10_-_118705029_118705091	0.011742374642386593	CAGUGCA	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr19_+_11889752_11889839	0.01109203972413459	CAGUGCA	ENSMUST00000061618.9|Patl1|ENSMUSG00000046139.9|protein associated with topoisomerase II homolog 1 (yeast)
mm39_v1_chr11_-_89193158_89193158	0.010658063934989224	CAGUGCA	ENSMUST00000061728.5|Nog|ENSMUSG00000048616.5|noggin
mm39_v1_chr17_-_78725510_78725581	0.010499582093862349	CAGUGCA	ENSMUST00000234029.2|Fez2|ENSMUSG00000056121.17|fasciculation and elongation protein zeta 2 (zygin II)	ENSMUST00000234530.2|Fez2|ENSMUSG00000056121.17|fasciculation and elongation protein zeta 2 (zygin II)	ENSMUST00000234052.2|Fez2|ENSMUSG00000056121.17|fasciculation and elongation protein zeta 2 (zygin II)	ENSMUST00000070039.14|Fez2|ENSMUSG00000056121.17|fasciculation and elongation protein zeta 2 (zygin II)	ENSMUST00000112487.3|Fez2|ENSMUSG00000056121.17|fasciculation and elongation protein zeta 2 (zygin II)
mm39_v1_chr2_+_138098454_138098499	0.010314850866870461	CAGUGCA	ENSMUST00000091556.12|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr11_+_105956867_105956926	0.010117354832570593	CAGUGCA	ENSMUST00000002048.8|Taco1|ENSMUSG00000001983.8|translational activator of mitochondrially encoded cytochrome c oxidase I
mm39_v1_chr1_+_171156568_171156713	0.010021845765016614	CAGUGCA	ENSMUST00000111300.8|Dedd|ENSMUSG00000013973.13|death effector domain-containing
mm39_v1_chr14_-_32907023_32907057	0.009869075963399481	CAGUGCA	ENSMUST00000130509.10|Wdfy4|ENSMUSG00000051506.18|WD repeat and FYVE domain containing 4	ENSMUST00000061753.15|Wdfy4|ENSMUSG00000051506.18|WD repeat and FYVE domain containing 4
mm39_v1_chr12_+_102095260_102095433	0.009774294622610695	CAGUGCA	ENSMUST00000079020.12|Slc24a4|ENSMUSG00000041771.15|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm39_v1_chr15_-_97902576_97902589	0.009280499704137038	CAGUGCA	ENSMUST00000023123.15|Col2a1|ENSMUSG00000022483.18|collagen, type II, alpha 1
mm39_v1_chr2_+_20742115_20742152	0.009257092705663765	CAGUGCA	ENSMUST00000114606.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4	ENSMUST00000114608.3|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr6_+_105654729_105654756	0.008921836718643076	CAGUGCA	ENSMUST00000089208.9|Cntn4|ENSMUSG00000064293.15|contactin 4
mm39_v1_chr2_-_132420074_132420153	0.008902962496639008	CAGUGCA	ENSMUST00000110136.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1	ENSMUST00000124107.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1	ENSMUST00000060955.12|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1
mm39_v1_chr8_+_55407872_55407889	0.008756663522460233	CAGUGCA	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr10_+_21171878_21171957	0.008708773322055573	CAGUGCA	ENSMUST00000020153.10|Hbs1l|ENSMUSG00000019977.17|Hbs1-like (S. cerevisiae)	ENSMUST00000218032.2|Hbs1l|ENSMUSG00000019977.17|Hbs1-like (S. cerevisiae)	ENSMUST00000061324.6|Hbs1l|ENSMUSG00000019977.17|Hbs1-like (S. cerevisiae)	ENSMUST00000219915.2|Hbs1l|ENSMUSG00000019977.17|Hbs1-like (S. cerevisiae)	ENSMUST00000092674.14|Hbs1l|ENSMUSG00000019977.17|Hbs1-like (S. cerevisiae)	ENSMUST00000218714.2|Hbs1l|ENSMUSG00000019977.17|Hbs1-like (S. cerevisiae)
mm39_v1_chr15_-_99670276_99670343	0.008452542287061774	CAGUGCA	ENSMUST00000109035.11|Cers5|ENSMUSG00000023021.16|ceramide synthase 5
mm39_v1_chr2_+_103254401_103254421	0.00834844533814699	CAGUGCA	ENSMUST00000028609.14|Elf5|ENSMUSG00000027186.16|E74-like factor 5
mm39_v1_chr4_+_59189239_59189257	0.007651153951587779	CAGUGCA	ENSMUST00000030074.8|Ugcg|ENSMUSG00000028381.9|UDP-glucose ceramide glucosyltransferase
mm39_v1_chr4_+_33924632_33924651	0.007436806163857091	CAGUGCA	ENSMUST00000057188.7|Cnr1|ENSMUSG00000044288.7|cannabinoid receptor 1 (brain)
mm39_v1_chr9_-_30833748_30833861	0.00715347973363495	CAGUGCA	ENSMUST00000065112.7|Adamts15|ENSMUSG00000033453.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm39_v1_chr5_-_151113619_151113734	0.007090324067780075	CAGUGCA	ENSMUST00000062015.15|Stard13|ENSMUSG00000016128.15|StAR-related lipid transfer (START) domain containing 13	ENSMUST00000110483.9|Stard13|ENSMUSG00000016128.15|StAR-related lipid transfer (START) domain containing 13
mm39_v1_chr16_+_29398149_29398160	0.006874171859100677	CAGUGCA	ENSMUST00000160597.8|Opa1|ENSMUSG00000038084.17|OPA1, mitochondrial dynamin like GTPase
mm39_v1_chr17_-_88372671_88372719	0.006693875208644421	CAGUGCA	ENSMUST00000235112.2|Fbxo11|ENSMUSG00000005371.16|F-box protein 11	ENSMUST00000005504.15|Fbxo11|ENSMUSG00000005371.16|F-box protein 11
mm39_v1_chr2_+_81883566_81883655	0.006612470749295453	CAGUGCA	ENSMUST00000047527.8|Zfp804a|ENSMUSG00000070866.5|zinc finger protein 804A
mm39_v1_chr7_+_24335969_24335989	0.006239376469489601	CAGUGCA	ENSMUST00000080718.6|Lypd3|ENSMUSG00000057454.6|Ly6/Plaur domain containing 3
mm39_v1_chr6_-_143892814_143892837	0.00618714447315015	CAGUGCA	ENSMUST00000124233.7|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000144289.4|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111748.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr1_+_92838479_92838505	0.0061685983015574335	CAGUGCA	ENSMUST00000027487.15|Rnpepl1|ENSMUSG00000026269.15|arginyl aminopeptidase (aminopeptidase B)-like 1
mm39_v1_chr3_-_94490023_94490077	0.006121694035112544	CAGUGCA	ENSMUST00000029783.16|Snx27|ENSMUSG00000028136.16|sorting nexin family member 27
mm39_v1_chr8_+_112667328_112667341	0.0060040783668542895	CAGUGCA	ENSMUST00000034428.8|Gabarapl2|ENSMUSG00000031950.8|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm39_v1_chr6_+_113284098_113284390	0.005980411373279311	CAGUGCA	ENSMUST00000113122.8|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000204198.3|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000113121.8|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000113119.8|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000113117.4|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000204626.3|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000203577.2|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1
mm39_v1_chr5_+_33978035_33978173	0.005779362564765551	CAGUGCA	ENSMUST00000075812.11|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2	ENSMUST00000114397.9|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2	ENSMUST00000155880.8|Nsd2|ENSMUSG00000057406.17|nuclear receptor binding SET domain protein 2
mm39_v1_chr1_-_172034354_172034371	0.005763660967301612	CAGUGCA	ENSMUST00000013842.12|Pea15a|ENSMUSG00000013698.13|phosphoprotein enriched in astrocytes 15A	ENSMUST00000111247.8|Pea15a|ENSMUSG00000013698.13|phosphoprotein enriched in astrocytes 15A
mm39_v1_chr10_-_108846816_108846844	0.005598209431097993	CAGUGCA	ENSMUST00000105276.8|Syt1|ENSMUSG00000035864.15|synaptotagmin I	ENSMUST00000064054.14|Syt1|ENSMUSG00000035864.15|synaptotagmin I
mm39_v1_chr18_-_10610048_10610146	0.005237468624646823	CAGUGCA	ENSMUST00000115864.8|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1	ENSMUST00000145320.2|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1	ENSMUST00000097670.10|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1
mm39_v1_chr4_+_9844349_9844372	0.005158318915178746	CAGUGCA	ENSMUST00000057613.3|Gdf6|ENSMUSG00000051279.3|growth differentiation factor 6
mm39_v1_chr18_-_77801624_77801673	0.005120919373559743	CAGUGCA	ENSMUST00000074653.6|8030462N17Rik|ENSMUSG00000047466.11|RIKEN cDNA 8030462N17 gene
mm39_v1_chr1_+_159871943_159872024	0.005089775084190634	CAGUGCA	ENSMUST00000163892.8|4930523C07Rik|ENSMUSG00000090394.9|RIKEN cDNA 4930523C07 gene
mm39_v1_chr19_+_8797330_8797398	0.004807536518363256	CAGUGCA	ENSMUST00000096753.5|Hnrnpul2|ENSMUSG00000071659.5|heterogeneous nuclear ribonucleoprotein U-like 2
mm39_v1_chr18_-_23174698_23174729	0.004795320726724001	CAGUGCA	ENSMUST00000097651.10|Nol4|ENSMUSG00000041923.16|nucleolar protein 4
mm39_v1_chr17_-_24470356_24470383	0.004519905102849208	CAGUGCA	ENSMUST00000115390.5|Ccnf|ENSMUSG00000072082.8|cyclin F
mm39_v1_chr12_-_104718159_104718211	0.004483333263685444	CAGUGCA	ENSMUST00000041987.7|Dicer1|ENSMUSG00000041415.11|dicer 1, ribonuclease type III
mm39_v1_chr12_-_100691251_100691287	0.004301791575091879	CAGUGCA	ENSMUST00000043599.7|Rps6ka5|ENSMUSG00000021180.10|ribosomal protein S6 kinase, polypeptide 5
mm39_v1_chr8_+_105951777_105951827	0.0040042135742608415	CAGUGCA	ENSMUST00000034361.10|D230025D16Rik|ENSMUSG00000031889.10|RIKEN cDNA D230025D16 gene
mm39_v1_chr15_-_103275190_103275225	0.003895601467829455	CAGUGCA	ENSMUST00000023128.8|Itga5|ENSMUSG00000000555.9|integrin alpha 5 (fibronectin receptor alpha)
mm39_v1_chr13_-_21625214_21625238	0.0038921268254807693	CAGUGCA	ENSMUST00000151743.9|Pgbd1|ENSMUSG00000055313.16|piggyBac transposable element derived 1	ENSMUST00000122872.9|Pgbd1|ENSMUSG00000055313.16|piggyBac transposable element derived 1
mm39_v1_chr11_-_75686874_75686907	0.003874423762545154	CAGUGCA	ENSMUST00000021209.8|Doc2b|ENSMUSG00000020848.8|double C2, beta
mm39_v1_chr3_+_117368876_117368889	0.0037675244688065335	CAGUGCA	ENSMUST00000106473.5|Plppr5|ENSMUSG00000033342.16|phospholipid phosphatase related 5
mm39_v1_chr16_+_72460029_72460077	0.0034463139741114823	CAGUGCA	ENSMUST00000023600.8|Robo1|ENSMUSG00000022883.12|roundabout guidance receptor 1
mm39_v1_chr16_-_18107046_18107135	0.003377188853077885	CAGUGCA	ENSMUST00000232424.2|Dgcr8|ENSMUSG00000022718.13|DGCR8, microprocessor complex subunit	ENSMUST00000009321.11|Dgcr8|ENSMUSG00000022718.13|DGCR8, microprocessor complex subunit
mm39_v1_chr10_-_53627201_53627219	0.0033476671541769988	CAGUGCA	ENSMUST00000020003.15|Fam184a|ENSMUSG00000019856.15|family with sequence similarity 184, member A
mm39_v1_chr5_+_115769960_115769992	0.003011662112813505	CAGUGCA	ENSMUST00000031492.15|Rab35|ENSMUSG00000029518.16|RAB35, member RAS oncogene family
mm39_v1_chr18_+_36414122_36414204	0.0028320574053111247	CAGUGCA	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr3_+_133942244_133942261	0.002467719036914435	CAGUGCA	ENSMUST00000181904.3|Cxxc4|ENSMUSG00000044365.16|CXXC finger 4
mm39_v1_chr4_-_132237804_132237820	0.0024154879601731715	CAGUGCA	ENSMUST00000030724.9|Sesn2|ENSMUSG00000028893.9|sestrin 2
mm39_v1_chr2_+_14609063_14609117	0.0023911272892028126	CAGUGCA	ENSMUST00000114723.9|Cacnb2|ENSMUSG00000057914.16|calcium channel, voltage-dependent, beta 2 subunit
mm39_v1_chr7_+_18915086_18915131	0.0023223621130833835	CAGUGCA	ENSMUST00000120595.8|Eml2|ENSMUSG00000040811.16|echinoderm microtubule associated protein like 2	ENSMUST00000048502.10|Eml2|ENSMUSG00000040811.16|echinoderm microtubule associated protein like 2
mm39_v1_chr11_-_101979297_101979359	0.002079463354213526	CAGUGCA	ENSMUST00000017458.11|Mpp2|ENSMUSG00000017314.13|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm39_v1_chr5_+_149942140_149942264	0.002053353806173906	CAGUGCA	ENSMUST00000065745.10|Rxfp2|ENSMUSG00000053368.14|relaxin/insulin-like family peptide receptor 2	ENSMUST00000110496.5|Rxfp2|ENSMUSG00000053368.14|relaxin/insulin-like family peptide receptor 2	ENSMUST00000201612.2|Rxfp2|ENSMUSG00000053368.14|relaxin/insulin-like family peptide receptor 2
mm39_v1_chr6_-_126621751_126621768	0.0019371817672473853	CAGUGCA	ENSMUST00000055168.5|Kcna1|ENSMUSG00000047976.5|potassium voltage-gated channel, shaker-related subfamily, member 1
mm39_v1_chr4_-_130032344_130032344	0.0017534099301194958	CAGUGCA	ENSMUST00000120154.9|Hcrtr1|ENSMUSG00000028778.16|hypocretin (orexin) receptor 1
mm39_v1_chr2_-_151474391_151474519	0.0016546357182904473	CAGUGCA	ENSMUST00000137936.2|Snph|ENSMUSG00000027457.16|syntaphilin	ENSMUST00000146172.8|Snph|ENSMUSG00000027457.16|syntaphilin	ENSMUST00000094456.10|Snph|ENSMUSG00000027457.16|syntaphilin	ENSMUST00000148755.8|Snph|ENSMUSG00000027457.16|syntaphilin	ENSMUST00000109875.8|Snph|ENSMUSG00000027457.16|syntaphilin	ENSMUST00000028951.14|Snph|ENSMUSG00000027457.16|syntaphilin	ENSMUST00000109877.10|Snph|ENSMUSG00000027457.16|syntaphilin
mm39_v1_chr8_-_120828211_120828246	0.0014292748909224833	CAGUGCA	ENSMUST00000034280.9|Zdhhc7|ENSMUSG00000031823.15|zinc finger, DHHC domain containing 7
mm39_v1_chr6_+_86172196_86172224	0.0013202173928809032	CAGUGCA	ENSMUST00000032066.13|Tgfa|ENSMUSG00000029999.15|transforming growth factor alpha
mm39_v1_chr11_+_94881861_94881916	0.0011892765580619152	CAGUGCA	ENSMUST00000038696.12|Ppp1r9b|ENSMUSG00000038976.13|protein phosphatase 1, regulatory subunit 9B
mm39_v1_chr5_-_115296222_115296241	0.0011562630879091663	CAGUGCA	ENSMUST00000112121.6|Mlec|ENSMUSG00000048578.12|malectin
mm39_v1_chr2_-_113844100_113844116	0.0009957742030432216	CAGUGCA	ENSMUST00000090275.5|Gjd2|ENSMUSG00000068615.5|gap junction protein, delta 2
mm39_v1_chr11_-_119438569_119438585	0.0009221078780138793	CAGUGCA	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chr1_-_9770434_9770554	0.0008948020938086385	CAGUGCA	ENSMUST00000088658.11|Mybl1|ENSMUSG00000025912.17|myeloblastosis oncogene-like 1
mm39_v1_chr7_+_105074938_105075210	0.0008918392616349501	CAGUGCA	ENSMUST00000033189.6|Cckbr|ENSMUSG00000030898.16|cholecystokinin B receptor	ENSMUST00000181339.8|Cckbr|ENSMUSG00000030898.16|cholecystokinin B receptor
mm39_v1_chr14_-_65335479_65335555	0.0008170563301008636	CAGUGCA	ENSMUST00000225633.2|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3	ENSMUST00000022550.8|Extl3|ENSMUSG00000021978.10|exostosin-like glycosyltransferase 3
mm39_v1_chr19_+_37423198_37423272	0.0002935280259318265	CAGUGCA	ENSMUST00000025944.9|Hhex|ENSMUSG00000024986.13|hematopoietically expressed homeobox
mm39_v1_chr7_-_105401398_105401442	0.0002807405974309585	CAGUGCA	ENSMUST00000033184.6|Tpp1|ENSMUSG00000030894.6|tripeptidyl peptidase I
mm39_v1_chr8_-_79163269_79163278	0.00025435128534051244	CAGUGCA	ENSMUST00000034115.5|Pou4f2|ENSMUSG00000031688.5|POU domain, class 4, transcription factor 2
mm39_v1_chr15_+_98687720_98687738	4.9299649062882525e-05	CAGUGCA	ENSMUST00000023734.8|Wnt1|ENSMUSG00000022997.10|wingless-type MMTV integration site family, member 1
