ISMARA results: GAGAACU

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GFI1 WT vs 36n/n vs KD

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Results for GAGAACU

Z-value: 0.05

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miRNA associated with seed GAGAACU

Name	miRBASE accession
mmu-miR-146a-5p miRBase	MIMAT0000158
mmu-miR-146b-5p miRBase	MIMAT0003475

Activity profile of GAGAACU motif

Sorted Z-values of GAGAACU motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_40554513 Show fit	0.01	ENSMUST00000027237.12	Il18rap Ensembl NCBI MGI UniProt Show fit	interleukin 18 receptor accessory protein
chr17_+_24689366 Show fit	0.01	ENSMUST00000053024.8	Pgp Ensembl NCBI MGI UniProt Show fit	phosphoglycolate phosphatase
chr1_+_156386414 Show fit	0.01	ENSMUST00000166172.9 ENSMUST00000027888.13	Abl2 Ensembl NCBI MGI UniProt Show fit	v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
chr18_+_11972277 Show fit	0.01	ENSMUST00000171109.9 ENSMUST00000046948.10	Cables1 Ensembl NCBI MGI UniProt Show fit	CDK5 and Abl enzyme substrate 1
chr13_-_111626562 Show fit	0.01	ENSMUST00000091236.11 ENSMUST00000047627.14	Gpbp1 Ensembl NCBI MGI UniProt Show fit	GC-rich promoter binding protein 1
chr3_-_61273228 Show fit	0.00	ENSMUST00000066298.3	B430305J03Rik Ensembl NCBI MGI UniProt Show fit	RIKEN cDNA B430305J03 gene
chr19_+_18690556 Show fit	0.00	ENSMUST00000062753.3	D030056L22Rik Ensembl NCBI MGI UniProt Show fit	RIKEN cDNA D030056L22 gene
chr16_+_4457805 Show fit	0.00	ENSMUST00000038770.4	Vasn Ensembl NCBI MGI UniProt Show fit	vasorin
chr11_-_5492175 Show fit	0.00	ENSMUST00000020776.5	Ccdc117 Ensembl NCBI MGI UniProt Show fit	coiled-coil domain containing 117
chr5_-_123038329 Show fit	0.00	ENSMUST00000031435.14	Kdm2b Ensembl NCBI MGI UniProt Show fit	lysine (K)-specific demethylase 2B

Showing 1 to 10 of 48 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAACU

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Gene Ontology Analysis