ISMARA results: UAAGACG

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GFI1 WT vs 36n/n vs KD

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Results for UAAGACG

Z-value: 0.05

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miRNA associated with seed UAAGACG

Name	miRBASE accession
mmu-miR-208a-3p miRBase	MIMAT0000520
mmu-miR-208b-3p miRBase	MIMAT0004939

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr12_-_73093953 Show fit	0.03	ENSMUST00000050029.8	Six1 Ensembl NCBI MGI UniProt Show fit	sine oculis-related homeobox 1
chr13_-_111626562 Show fit	0.02	ENSMUST00000091236.11 ENSMUST00000047627.14	Gpbp1 Ensembl NCBI MGI UniProt Show fit	GC-rich promoter binding protein 1
chr3_+_41510160 Show fit	0.02	ENSMUST00000026865.15 ENSMUST00000194181.6 ENSMUST00000195846.6	Jade1 Ensembl NCBI MGI UniProt Show fit	jade family PHD finger 1
chr10_+_39245746 Show fit	0.01	ENSMUST00000063091.13 ENSMUST00000099967.10 ENSMUST00000126486.8	Fyn Ensembl NCBI MGI UniProt Show fit	Fyn proto-oncogene
chr17_+_6869070 Show fit	0.01	ENSMUST00000092966.5	Dynlt1c Ensembl NCBI MGI UniProt Show fit	dynein light chain Tctex-type 1C
chr14_-_31299275 Show fit	0.01	ENSMUST00000112027.9	Colq Ensembl NCBI MGI UniProt Show fit	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr12_-_107969853 Show fit	0.01	ENSMUST00000066060.11	Bcl11b Ensembl NCBI MGI UniProt Show fit	B cell leukemia/lymphoma 11B
chr17_+_29312737 Show fit	0.01	ENSMUST00000023829.8 ENSMUST00000233296.2	Cdkn1a Ensembl NCBI MGI UniProt Show fit	cyclin-dependent kinase inhibitor 1A (P21)
chr9_-_78389006 Show fit	0.01	ENSMUST00000042235.15	Eef1a1 Ensembl NCBI MGI UniProt Show fit	eukaryotic translation elongation factor 1 alpha 1
chr19_-_32717166 Show fit	0.01	ENSMUST00000235142.2 ENSMUST00000070210.6 ENSMUST00000236011.2	Atad1 Ensembl NCBI MGI UniProt Show fit	ATPase family, AAA domain containing 1

Showing 1 to 10 of 82 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

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Gene Ontology Analysis