mm39_v1_chr5_+_23639432_23639478	0.1640970726145513	AAUGCCC	ENSMUST00000094962.9|Kmt2e|ENSMUSG00000029004.16|lysine (K)-specific methyltransferase 2E	ENSMUST00000115128.8|Kmt2e|ENSMUSG00000029004.16|lysine (K)-specific methyltransferase 2E
mm39_v1_chr8_-_123768759_123768834	0.1548373503298275	AAUGCCC	ENSMUST00000098334.13|Ankrd11|ENSMUSG00000035569.18|ankyrin repeat domain 11
mm39_v1_chr6_-_38853097_38853167	0.13984701148055856	AAUGCCC	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr11_+_33913013_33913013	0.11790359598069156	AAUGCCC	ENSMUST00000020362.3|Kcnmb1|ENSMUSG00000020155.3|potassium large conductance calcium-activated channel, subfamily M, beta member 1
mm39_v1_chr13_+_45543208_45543226	0.10587941621356471	AAUGCCC	ENSMUST00000038275.11|Mylip|ENSMUSG00000038175.11|myosin regulatory light chain interacting protein
mm39_v1_chr17_+_87061117_87061137	0.10285338717388581	AAUGCCC	ENSMUST00000024954.11|Epas1|ENSMUSG00000024140.11|endothelial PAS domain protein 1
mm39_v1_chr11_+_77107006_77107113	0.10235073043217181	AAUGCCC	ENSMUST00000156488.8|Ssh2|ENSMUSG00000037926.16|slingshot protein phosphatase 2	ENSMUST00000037912.12|Ssh2|ENSMUSG00000037926.16|slingshot protein phosphatase 2
mm39_v1_chr2_+_71811526_71811631	0.09547408463074601	AAUGCCC	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr5_-_106844685_106844707	0.093076889468037	AAUGCCC	ENSMUST00000127434.8|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644	ENSMUST00000112696.8|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644	ENSMUST00000112698.8|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644
mm39_v1_chr19_+_43678109_43678133	0.09299288767997628	AAUGCCC	ENSMUST00000081079.6|Entpd7|ENSMUSG00000025192.14|ectonucleoside triphosphate diphosphohydrolase 7
mm39_v1_chr1_-_105284383_105284402	0.09182912237707173	AAUGCCC	ENSMUST00000058688.7|Rnf152|ENSMUSG00000047496.7|ring finger protein 152
mm39_v1_chr5_-_90514360_90514469	0.09163768932801557	AAUGCCC	ENSMUST00000168058.7|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17	ENSMUST00000014421.15|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17
mm39_v1_chr2_-_12306722_12306734	0.08481832109371629	AAUGCCC	ENSMUST00000028106.11|Itga8|ENSMUSG00000026768.11|integrin alpha 8
mm39_v1_chr12_+_38830081_38830116	0.08375566800281453	AAUGCCC	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr8_+_89247976_89247999	0.0802929481129707	AAUGCCC	ENSMUST00000034086.13|Nkd1|ENSMUSG00000031661.13|naked cuticle 1
mm39_v1_chr4_-_19708910_19709004	0.0767080803749339	AAUGCCC	ENSMUST00000108246.9|Wwp1|ENSMUSG00000041058.16|WW domain containing E3 ubiquitin protein ligase 1
mm39_v1_chr8_-_116434517_116434533	0.07667577182956399	AAUGCCC	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr1_-_64776890_64776915	0.07563235925092468	AAUGCCC	ENSMUST00000116133.4|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5	ENSMUST00000063982.7|Fzd5|ENSMUSG00000045005.10|frizzled class receptor 5
mm39_v1_chr9_-_62888156_62888184	0.07421734067133873	AAUGCCC	ENSMUST00000098651.6|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1	ENSMUST00000214830.2|Pias1|ENSMUSG00000032405.11|protein inhibitor of activated STAT 1
mm39_v1_chr19_-_31742427_31742480	0.07341041659464818	AAUGCCC	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr1_-_92107971_92108063	0.07227435365892446	AAUGCCC	ENSMUST00000186002.3|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4	ENSMUST00000097644.9|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4
mm39_v1_chr5_+_64960705_64960731	0.0639985934391272	AAUGCCC	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr14_-_70837253_70837327	0.06394404984215094	AAUGCCC	ENSMUST00000022690.10|Fam160b2|ENSMUSG00000022095.10|family with sequence similarity 160, member B2
mm39_v1_chr13_+_81031512_81031543	0.06336470864912562	AAUGCCC	ENSMUST00000099356.10|Arrdc3|ENSMUSG00000074794.11|arrestin domain containing 3
mm39_v1_chr12_+_40495951_40496015	0.06323372931123734	AAUGCCC	ENSMUST00000037488.8|Dock4|ENSMUSG00000035954.11|dedicator of cytokinesis 4
mm39_v1_chr9_-_101128976_101129003	0.06267195498641558	AAUGCCC	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr4_-_126323291_126323349	0.05406599847432878	AAUGCCC	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr10_-_120312374_120312388	0.05358463618606274	AAUGCCC	ENSMUST00000072777.14|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2	ENSMUST00000159699.2|Hmga2|ENSMUSG00000056758.15|high mobility group AT-hook 2
mm39_v1_chr15_-_98769056_98769085	0.05156773247756533	AAUGCCC	ENSMUST00000178486.9|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D	ENSMUST00000023741.16|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D
mm39_v1_chr11_+_77873535_77873649	0.0513114636979725	AAUGCCC	ENSMUST00000108360.8|Phf12|ENSMUSG00000037791.16|PHD finger protein 12	ENSMUST00000049167.14|Phf12|ENSMUSG00000037791.16|PHD finger protein 12
mm39_v1_chr1_-_57011595_57011661	0.051101093636386374	AAUGCCC	ENSMUST00000042857.14|Satb2|ENSMUSG00000038331.16|special AT-rich sequence binding protein 2
mm39_v1_chr6_-_116170389_116170462	0.05105105399601627	AAUGCCC	ENSMUST00000088896.10|Tmcc1|ENSMUSG00000030126.18|transmembrane and coiled coil domains 1
mm39_v1_chr17_+_3376827_3376871	0.050690117974243415	AAUGCCC	ENSMUST00000169838.9|Tiam2|ENSMUSG00000023800.16|T cell lymphoma invasion and metastasis 2
mm39_v1_chr13_+_47276132_47276191	0.050522940068197485	AAUGCCC	ENSMUST00000068891.12|Rnf144b|ENSMUSG00000038068.16|ring finger protein 144B
mm39_v1_chr4_-_3938352_3938401	0.049196839175368774	AAUGCCC	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr8_+_26092252_26092335	0.04892991607902116	AAUGCCC	ENSMUST00000136107.9|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000146919.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000139966.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000142395.8|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3	ENSMUST00000143445.2|Nsd3|ENSMUSG00000054823.18|nuclear receptor binding SET domain protein 3
mm39_v1_chr11_-_62348115_62348159	0.04876927903676466	AAUGCCC	ENSMUST00000069456.11|Ncor1|ENSMUSG00000018501.18|nuclear receptor co-repressor 1	ENSMUST00000018645.13|Ncor1|ENSMUSG00000018501.18|nuclear receptor co-repressor 1
mm39_v1_chr3_-_119576911_119577037	0.047592215907502296	AAUGCCC	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr16_+_34605282_34605305	0.043438804563756664	AAUGCCC	ENSMUST00000023538.9|Mylk|ENSMUSG00000022836.12|myosin, light polypeptide kinase
mm39_v1_chr19_-_7319157_7319195	0.04165027142757659	AAUGCCC	ENSMUST00000164205.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000165286.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000168324.2|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000032557.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr8_-_17585263_17585335	0.04132306668981527	AAUGCCC	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr10_+_84412490_84412490	0.03965930312762162	AAUGCCC	ENSMUST00000020223.8|Tcp11l2|ENSMUSG00000020034.8|t-complex 11 (mouse) like 2
mm39_v1_chr4_-_155306992_155307049	0.03958485505926384	AAUGCCC	ENSMUST00000084103.10|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)	ENSMUST00000030917.6|Ski|ENSMUSG00000029050.16|ski sarcoma viral oncogene homolog (avian)
mm39_v1_chr16_-_90807983_90808001	0.03729110861711338	AAUGCCC	ENSMUST00000170853.8|Synj1|ENSMUSG00000022973.19|synaptojanin 1	ENSMUST00000130813.3|Synj1|ENSMUSG00000022973.19|synaptojanin 1	ENSMUST00000118390.10|Synj1|ENSMUSG00000022973.19|synaptojanin 1
mm39_v1_chr3_+_135144202_135144241	0.03382254761259567	AAUGCCC	ENSMUST00000166033.6|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3
mm39_v1_chr17_+_26934617_26934698	0.03261087804628506	AAUGCCC	ENSMUST00000062519.14|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000144221.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000142539.8|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000151681.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor
mm39_v1_chr10_+_86136236_86136467	0.03181478748175147	AAUGCCC	ENSMUST00000020234.14|Timp3|ENSMUSG00000020044.14|tissue inhibitor of metalloproteinase 3
mm39_v1_chr4_+_132366298_132366430	0.030917647199899687	AAUGCCC	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr9_+_108569315_108569392	0.02777234140293037	AAUGCCC	ENSMUST00000035220.12|Prkar2a|ENSMUSG00000032601.14|protein kinase, cAMP dependent regulatory, type II alpha
mm39_v1_chr10_-_121422635_121422708	0.027215981533734248	AAUGCCC	ENSMUST00000219493.2|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1	ENSMUST00000020316.4|Tbk1|ENSMUSG00000020115.4|TANK-binding kinase 1
mm39_v1_chr5_-_120726721_120726743	0.027169279573494683	AAUGCCC	ENSMUST00000046426.10|Tpcn1|ENSMUSG00000032741.10|two pore channel 1
mm39_v1_chr8_+_91555449_91555470	0.02691435559118824	AAUGCCC	ENSMUST00000109614.9|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr14_-_39194782_39195045	0.026571001428133012	AAUGCCC	ENSMUST00000168810.9|Nrg3|ENSMUSG00000041014.18|neuregulin 3	ENSMUST00000173780.2|Nrg3|ENSMUSG00000041014.18|neuregulin 3	ENSMUST00000166968.9|Nrg3|ENSMUSG00000041014.18|neuregulin 3
mm39_v1_chr11_+_70323452_70323533	0.025979099071631716	AAUGCCC	ENSMUST00000084954.13|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000108568.10|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000079056.9|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102564.11|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000124943.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000150076.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102563.2|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2
mm39_v1_chr11_-_119119287_119119330	0.02569781893969303	AAUGCCC	ENSMUST00000207655.2|Tbc1d16|ENSMUSG00000039976.5|TBC1 domain family, member 16	ENSMUST00000036113.4|Tbc1d16|ENSMUSG00000039976.5|TBC1 domain family, member 16
mm39_v1_chr19_-_47452840_47452894	0.02451261620320114	AAUGCCC	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr17_-_80787398_80787398	0.02446507855858044	AAUGCCC	ENSMUST00000068714.7|Sos1|ENSMUSG00000024241.8|SOS Ras/Rac guanine nucleotide exchange factor 1
mm39_v1_chr8_-_70495335_70495384	0.02439030836382135	AAUGCCC	ENSMUST00000168013.3|Mau2|ENSMUSG00000031858.17|MAU2 sister chromatid cohesion factor	ENSMUST00000212308.2|Mau2|ENSMUSG00000031858.17|MAU2 sister chromatid cohesion factor	ENSMUST00000050561.13|Mau2|ENSMUSG00000031858.17|MAU2 sister chromatid cohesion factor	ENSMUST00000212451.2|Mau2|ENSMUSG00000031858.17|MAU2 sister chromatid cohesion factor
mm39_v1_chr7_+_5083212_5083300	0.02349717125478536	AAUGCCC	ENSMUST00000098845.10|Epn1|ENSMUSG00000035203.17|epsin 1	ENSMUST00000146317.8|Epn1|ENSMUSG00000035203.17|epsin 1	ENSMUST00000153169.2|Epn1|ENSMUSG00000035203.17|epsin 1	ENSMUST00000045277.7|Epn1|ENSMUSG00000035203.17|epsin 1
mm39_v1_chr6_-_56774622_56774741	0.02115695864475906	AAUGCCC	ENSMUST00000114323.8|Kbtbd2|ENSMUSG00000059486.12|kelch repeat and BTB (POZ) domain containing 2
mm39_v1_chr19_-_29783389_29783389	0.020203365644732105	AAUGCCC	ENSMUST00000177155.8|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr12_-_56581823_56581891	0.020182016008864323	AAUGCCC	ENSMUST00000178477.9|Nkx2-1|ENSMUSG00000001496.16|NK2 homeobox 1
mm39_v1_chr2_-_57004933_57005050	0.020011303193155465	AAUGCCC	ENSMUST00000028166.9|Nr4a2|ENSMUSG00000026826.14|nuclear receptor subfamily 4, group A, member 2
mm39_v1_chr14_+_4230569_4230642	0.018283208008747234	AAUGCCC	ENSMUST00000090543.6|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr7_+_110226857_110226873	0.017776122765453088	AAUGCCC	ENSMUST00000033054.10|Adm|ENSMUSG00000030790.16|adrenomedullin
mm39_v1_chr11_-_104333059_104333117	0.017758539311413333	AAUGCCC	ENSMUST00000106977.8|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1	ENSMUST00000106972.8|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1
mm39_v1_chr11_+_77576981_77577005	0.017472965616249503	AAUGCCC	ENSMUST00000100802.11|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2	ENSMUST00000181023.2|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2
mm39_v1_chr10_-_128481833_128481881	0.015329805613391064	AAUGCCC	ENSMUST00000133342.10|Ikzf4|ENSMUSG00000002578.19|IKAROS family zinc finger 4
mm39_v1_chr13_-_64422693_64422761	0.014647188849564681	AAUGCCC	ENSMUST00000109770.2|Cdc14b|ENSMUSG00000033102.16|CDC14 cell division cycle 14B
mm39_v1_chr4_+_135899678_135899738	0.013992292351692142	AAUGCCC	ENSMUST00000061721.6|E2f2|ENSMUSG00000018983.10|E2F transcription factor 2
mm39_v1_chr9_+_72439496_72439553	0.012868250337532068	AAUGCCC	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr19_-_56996617_56996660	0.012596865642553813	AAUGCCC	ENSMUST00000118800.8|Afap1l2|ENSMUSG00000025083.19|actin filament associated protein 1-like 2	ENSMUST00000111584.9|Afap1l2|ENSMUSG00000025083.19|actin filament associated protein 1-like 2	ENSMUST00000122359.8|Afap1l2|ENSMUSG00000025083.19|actin filament associated protein 1-like 2	ENSMUST00000148049.8|Afap1l2|ENSMUSG00000025083.19|actin filament associated protein 1-like 2
mm39_v1_chr3_+_88439616_88439703	0.01188772808250858	AAUGCCC	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chr10_+_98943999_98944068	0.010418133593176173	AAUGCCC	ENSMUST00000161240.4|Galnt4|ENSMUSG00000090035.4|polypeptide N-acetylgalactosaminyltransferase 4
mm39_v1_chr11_-_53313950_53313997	0.010298395561416455	AAUGCCC	ENSMUST00000036045.6|Leap2|ENSMUSG00000036216.6|liver-expressed antimicrobial peptide 2
mm39_v1_chr3_-_27764571_27764616	0.010034116901619438	AAUGCCC	ENSMUST00000046157.10|Fndc3b|ENSMUSG00000039286.13|fibronectin type III domain containing 3B
mm39_v1_chr1_-_134006847_134006862	0.008290547203551294	AAUGCCC	ENSMUST00000020692.7|Btg2|ENSMUSG00000020423.7|BTG anti-proliferation factor 2
mm39_v1_chr9_+_113760002_113760055	0.007680444468584135	AAUGCCC	ENSMUST00000084885.12|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1	ENSMUST00000009885.14|Ubp1|ENSMUSG00000009741.16|upstream binding protein 1
mm39_v1_chr15_+_6737853_6737883	0.00711498801303026	AAUGCCC	ENSMUST00000061656.8|Rictor|ENSMUSG00000050310.10|RPTOR independent companion of MTOR, complex 2
mm39_v1_chr5_+_144037171_144037254	0.0064948853174312164	AAUGCCC	ENSMUST00000041804.8|Lmtk2|ENSMUSG00000038970.8|lemur tyrosine kinase 2
mm39_v1_chr2_+_173501553_173501664	0.006289272216397268	AAUGCCC	ENSMUST00000029024.10|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family	ENSMUST00000109110.4|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family
mm39_v1_chr8_-_89770790_89770823	0.005533129199717988	AAUGCCC	ENSMUST00000034090.8|Sall1|ENSMUSG00000031665.8|spalt like transcription factor 1
mm39_v1_chr15_-_73056713_73056822	0.005476709334199977	AAUGCCC	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr7_-_70010341_70010494	0.00487016631394915	AAUGCCC	ENSMUST00000032768.15|Nr2f2|ENSMUSG00000030551.15|nuclear receptor subfamily 2, group F, member 2
mm39_v1_chr15_-_98505508_98505519	0.004770970525967935	AAUGCCC	ENSMUST00000096224.6|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr6_-_99643723_99643784	0.004280102303991416	AAUGCCC	ENSMUST00000032151.3|Eif4e3|ENSMUSG00000093661.2|eukaryotic translation initiation factor 4E member 3
mm39_v1_chr17_+_28128307_28128532	0.004235139839130436	AAUGCCC	ENSMUST00000233525.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000025058.15|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000233866.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1
mm39_v1_chr11_+_85202058_85202113	0.004135848648994428	AAUGCCC	ENSMUST00000020835.16|Ppm1d|ENSMUSG00000020525.18|protein phosphatase 1D magnesium-dependent, delta isoform
mm39_v1_chr18_-_77801624_77801673	0.003863368463265955	AAUGCCC	ENSMUST00000074653.6|8030462N17Rik|ENSMUSG00000047466.11|RIKEN cDNA 8030462N17 gene
mm39_v1_chr4_+_137321451_137321585	0.0038615683615560096	AAUGCCC	ENSMUST00000105840.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105839.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000055131.13|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105838.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48
mm39_v1_chr5_+_63806451_63806451	0.003412947428390242	AAUGCCC	ENSMUST00000159584.3|Nwd2|ENSMUSG00000090061.10|NACHT and WD repeat domain containing 2
mm39_v1_chr2_-_139908615_139908725	0.002850725776591784	AAUGCCC	ENSMUST00000046656.9|Tasp1|ENSMUSG00000039033.12|taspase, threonine aspartase 1	ENSMUST00000099304.4|Tasp1|ENSMUSG00000039033.12|taspase, threonine aspartase 1	ENSMUST00000110079.9|Tasp1|ENSMUSG00000039033.12|taspase, threonine aspartase 1
mm39_v1_chr13_-_34529157_34529257	0.0024590377942511512	AAUGCCC	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr11_+_104077153_104077185	0.0018195153669262572	AAUGCCC	ENSMUST00000107000.2|Sppl2c|ENSMUSG00000049506.8|signal peptide peptidase 2C	ENSMUST00000059448.8|Sppl2c|ENSMUSG00000049506.8|signal peptide peptidase 2C
mm39_v1_chr15_-_93173032_93173060	0.0016328048436718842	AAUGCCC	ENSMUST00000057896.5|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000049484.13|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000230063.2|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1
mm39_v1_chrX_-_102865546_102865598	0.00147867763104775	AAUGCCC	ENSMUST00000042664.10|Slc16a2|ENSMUSG00000033965.11|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm39_v1_chr2_-_103133524_103133623	0.0013820680591642434	AAUGCCC	ENSMUST00000090475.10|Ehf|ENSMUSG00000012350.16|ets homologous factor
mm39_v1_chr16_+_33201164_33201206	0.0005297611274795564	AAUGCCC	ENSMUST00000165418.9|Zfp148|ENSMUSG00000022811.18|zinc finger protein 148
mm39_v1_chr16_-_60425608_60425616	0.0005064950635106413	AAUGCCC	ENSMUST00000068860.13|Epha6|ENSMUSG00000055540.16|Eph receptor A6
mm39_v1_chr8_+_105067159_105067255	0.0004942516869652427	AAUGCCC	ENSMUST00000212948.2|Cmtm3|ENSMUSG00000031875.8|CKLF-like MARVEL transmembrane domain containing 3	ENSMUST00000034343.5|Cmtm3|ENSMUSG00000031875.8|CKLF-like MARVEL transmembrane domain containing 3
mm39_v1_chr6_-_39702381_39702413	0.00024086469459930435	AAUGCCC	ENSMUST00000002487.15|Braf|ENSMUSG00000002413.16|Braf transforming gene
