mm39_v1_chr8_+_109441276_109441276	0.6392308885147434	ACAGUAU	ENSMUST00000043896.10|Zfhx3|ENSMUSG00000038872.11|zinc finger homeobox 3
mm39_v1_chr4_+_119671688_119671723	0.5789497760638121	ACAGUAU	ENSMUST00000106307.9|Hivep3|ENSMUSG00000028634.18|human immunodeficiency virus type I enhancer binding protein 3
mm39_v1_chr11_-_69304501_69304501	0.5623551465729582	ACAGUAU	ENSMUST00000094077.5|Kdm6b|ENSMUSG00000018476.8|KDM1 lysine (K)-specific demethylase 6B
mm39_v1_chr16_-_10131804_10131832	0.5590097271916953	ACAGUAU	ENSMUST00000078357.5|Emp2|ENSMUSG00000022505.10|epithelial membrane protein 2
mm39_v1_chr8_-_107064615_107064640	0.5578187262308466	ACAGUAU	ENSMUST00000067512.8|Smpd3|ENSMUSG00000031906.10|sphingomyelin phosphodiesterase 3, neutral
mm39_v1_chr7_-_98305737_98305808	0.5451955301115321	ACAGUAU	ENSMUST00000205911.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000038359.6|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000206611.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000206619.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor
mm39_v1_chr1_-_162567919_162568103	0.5337704509311046	ACAGUAU	ENSMUST00000182331.2|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000183011.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182593.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C	ENSMUST00000182149.8|Prrc2c|ENSMUSG00000040225.16|proline-rich coiled-coil 2C
mm39_v1_chr8_-_123768759_123768834	0.5249956537015373	ACAGUAU	ENSMUST00000098334.13|Ankrd11|ENSMUSG00000035569.18|ankyrin repeat domain 11
mm39_v1_chr3_+_53371086_53371102	0.47986341236746577	ACAGUAU	ENSMUST00000058577.5|Proser1|ENSMUSG00000049504.13|proline and serine rich 1
mm39_v1_chrX_+_137815171_137815187	0.4585951578205408	ACAGUAU	ENSMUST00000064937.14|Nrk|ENSMUSG00000052854.16|Nik related kinase	ENSMUST00000113052.8|Nrk|ENSMUSG00000052854.16|Nik related kinase
mm39_v1_chr2_-_12306722_12306734	0.4568570165258376	ACAGUAU	ENSMUST00000028106.11|Itga8|ENSMUSG00000026768.11|integrin alpha 8
mm39_v1_chr18_+_39126178_39126240	0.44718921479880297	ACAGUAU	ENSMUST00000097593.9|Arhgap26|ENSMUSG00000036452.19|Rho GTPase activating protein 26
mm39_v1_chr1_+_132973724_132973820	0.4352912143335605	ACAGUAU	ENSMUST00000077730.7|Pik3c2b|ENSMUSG00000026447.18|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
mm39_v1_chr10_-_71121083_71121094	0.4286461272449874	ACAGUAU	ENSMUST00000020085.7|Ube2d1|ENSMUSG00000019927.7|ubiquitin-conjugating enzyme E2D 1
mm39_v1_chr16_+_37909363_37909426	0.4271293437581547	ACAGUAU	ENSMUST00000023507.13|Gsk3b|ENSMUSG00000022812.15|glycogen synthase kinase 3 beta
mm39_v1_chr15_-_53765869_53765926	0.4245058794022462	ACAGUAU	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr1_-_165830160_165830182	0.42241679230968204	ACAGUAU	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr9_+_59658156_59658205	0.41735758282414	ACAGUAU	ENSMUST00000136740.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000135298.8|Myo9a|ENSMUSG00000039585.16|myosin IXa	ENSMUST00000128341.2|Myo9a|ENSMUSG00000039585.16|myosin IXa
mm39_v1_chr16_+_57173456_57173480	0.3911856891437408	ACAGUAU	ENSMUST00000159816.8|Filip1l|ENSMUSG00000043336.15|filamin A interacting protein 1-like
mm39_v1_chr9_+_72832904_72832955	0.3707743043034144	ACAGUAU	ENSMUST00000038489.6|Pygo1|ENSMUSG00000034910.6|pygopus 1
mm39_v1_chr14_-_30075424_30075492	0.3600745180489754	ACAGUAU	ENSMUST00000224198.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000238675.2|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000112249.10|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit	ENSMUST00000224785.3|Cacna1d|ENSMUSG00000015968.19|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm39_v1_chr3_-_52012462_52012497	0.3513335452128171	ACAGUAU	ENSMUST00000121440.4|Maml3|ENSMUSG00000061143.16|mastermind like transcriptional coactivator 3
mm39_v1_chr10_+_111342147_111342278	0.3492394594232849	ACAGUAU	ENSMUST00000164773.2|Phlda1|ENSMUSG00000020205.9|pleckstrin homology like domain, family A, member 1
mm39_v1_chr1_-_79649683_79649711	0.33788617415569366	ACAGUAU	ENSMUST00000162342.8|Ap1s3|ENSMUSG00000054702.15|adaptor-related protein complex AP-1, sigma 3
mm39_v1_chr1_-_158785937_158785937	0.3284143994236628	ACAGUAU	ENSMUST00000159861.9|Pappa2|ENSMUSG00000073530.12|pappalysin 2
mm39_v1_chr3_-_133250129_133250174	0.32753558062194854	ACAGUAU	ENSMUST00000196398.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2	ENSMUST00000098603.8|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr13_-_54835508_54835623	0.3201919442976426	ACAGUAU	ENSMUST00000177950.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44	ENSMUST00000146931.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44
mm39_v1_chr5_-_114131934_114131964	0.3196932290167105	ACAGUAU	ENSMUST00000159592.8|Ssh1|ENSMUSG00000042121.17|slingshot protein phosphatase 1
mm39_v1_chr11_+_16702203_16702215	0.30462517643573545	ACAGUAU	ENSMUST00000102884.10|Egfr|ENSMUSG00000020122.17|epidermal growth factor receptor	ENSMUST00000020329.13|Egfr|ENSMUSG00000020122.17|epidermal growth factor receptor
mm39_v1_chr16_-_92622972_92623037	0.301827429014631	ACAGUAU	ENSMUST00000023673.14|Runx1|ENSMUSG00000022952.18|runt related transcription factor 1
mm39_v1_chr12_+_38830081_38830116	0.2965607083684464	ACAGUAU	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr17_-_66384017_66384086	0.28486655412476886	ACAGUAU	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr12_-_81827893_81827949	0.28356076414251546	ACAGUAU	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr17_+_26633794_26633939	0.28247387141783714	ACAGUAU	ENSMUST00000182897.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000183077.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000053020.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B
mm39_v1_chr3_+_88857929_88857975	0.2780213430552802	ACAGUAU	ENSMUST00000186583.7|Ash1l|ENSMUSG00000028053.14|ASH1 like histone lysine methyltransferase
mm39_v1_chr11_-_18968979_18968990	0.27477187697877364	ACAGUAU	ENSMUST00000144988.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr12_+_49429574_49429666	0.2728674210601152	ACAGUAU	ENSMUST00000179669.3|Foxg1|ENSMUSG00000020950.11|forkhead box G1
mm39_v1_chr9_+_21077010_21077058	0.2721088838609134	ACAGUAU	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr18_-_4352944_4353015	0.269285235857152	ACAGUAU	ENSMUST00000025078.10|Map3k8|ENSMUSG00000024235.12|mitogen-activated protein kinase kinase kinase 8
mm39_v1_chr8_-_123278054_123278071	0.26400133534033193	ACAGUAU	ENSMUST00000156333.9|Piezo1|ENSMUSG00000014444.18|piezo-type mechanosensitive ion channel component 1	ENSMUST00000067252.14|Piezo1|ENSMUSG00000014444.18|piezo-type mechanosensitive ion channel component 1
mm39_v1_chr5_-_90514360_90514469	0.2606382620811703	ACAGUAU	ENSMUST00000168058.7|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17	ENSMUST00000014421.15|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17
mm39_v1_chr10_+_56253418_56253434	0.2602015368160741	ACAGUAU	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr9_-_70411000_70411092	0.2601936755129014	ACAGUAU	ENSMUST00000034739.12|Rnf111|ENSMUSG00000032217.14|ring finger 111
mm39_v1_chr1_-_30912662_30912738	0.2506857359747919	ACAGUAU	ENSMUST00000186733.7|Phf3|ENSMUSG00000048874.16|PHD finger protein 3
mm39_v1_chr15_+_99936516_99936552	0.24574506306068813	ACAGUAU	ENSMUST00000100203.10|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr5_+_143608194_143608215	0.2416922646403601	ACAGUAU	ENSMUST00000116456.10|Cyth3|ENSMUSG00000018001.19|cytohesin 3
mm39_v1_chr5_-_122917341_122917496	0.24118796109909557	ACAGUAU	ENSMUST00000198257.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000199599.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000196742.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000200109.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000111668.8|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm39_v1_chr15_+_80595486_80595541	0.2311582740971664	ACAGUAU	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr12_+_4967376_4967438	0.2274189063281717	ACAGUAU	ENSMUST00000045664.7|Atad2b|ENSMUSG00000052812.6|ATPase family, AAA domain containing 2B
mm39_v1_chr18_-_16942289_16942384	0.2265030354762193	ACAGUAU	ENSMUST00000025166.14|Cdh2|ENSMUSG00000024304.15|cadherin 2
mm39_v1_chr5_+_64960705_64960731	0.2241162458178121	ACAGUAU	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr7_+_66489500_66489561	0.2222686773117109	ACAGUAU	ENSMUST00000107478.9|Adamts17|ENSMUSG00000058145.17|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm39_v1_chr6_+_83891336_83891393	0.22201754150764408	ACAGUAU	ENSMUST00000204751.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000204202.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000203455.3|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000113836.6|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000113835.10|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638	ENSMUST00000032088.14|Zfp638|ENSMUSG00000030016.15|zinc finger protein 638
mm39_v1_chr14_-_4198510_4198572	0.22139533050553425	ACAGUAU	ENSMUST00000133460.2|Nkiras1|ENSMUSG00000021772.16|NFKB inhibitor interacting Ras-like protein 1	ENSMUST00000132374.9|Nkiras1|ENSMUSG00000021772.16|NFKB inhibitor interacting Ras-like protein 1
mm39_v1_chr10_+_34265969_34265985	0.22096136447718154	ACAGUAU	ENSMUST00000105511.2|Col10a1|ENSMUSG00000039462.5|collagen, type X, alpha 1
mm39_v1_chr14_+_63075127_63075203	0.21977159108056815	ACAGUAU	ENSMUST00000014691.10|Wdfy2|ENSMUSG00000014547.11|WD repeat and FYVE domain containing 2
mm39_v1_chr7_+_100355798_100355909	0.21577376654391056	ACAGUAU	ENSMUST00000107042.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000207564.2|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000049053.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A
mm39_v1_chr8_-_110464345_110464418	0.21442099356734662	ACAGUAU	ENSMUST00000212605.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000093162.4|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like	ENSMUST00000212726.2|Atxn1l|ENSMUSG00000069895.5|ataxin 1-like
mm39_v1_chr11_+_44508137_44508169	0.21382674073098615	ACAGUAU	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chr2_-_33321306_33321359	0.21360701959934844	ACAGUAU	ENSMUST00000113158.8|Zbtb34|ENSMUSG00000068966.11|zinc finger and BTB domain containing 34
mm39_v1_chr3_-_107425316_107425339	0.21104405331267645	ACAGUAU	ENSMUST00000169449.8|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17	ENSMUST00000029499.15|Slc6a17|ENSMUSG00000027894.15|solute carrier family 6 (neurotransmitter transporter), member 17
mm39_v1_chr13_-_103911092_103911139	0.20855944401951543	ACAGUAU	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr8_+_23901506_23901523	0.20700623359769713	ACAGUAU	ENSMUST00000033952.8|Sfrp1|ENSMUSG00000031548.8|secreted frizzled-related protein 1
mm39_v1_chr18_-_73836810_73836877	0.20371815811249533	ACAGUAU	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr13_+_89687915_89687915	0.20258117056236255	ACAGUAU	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr17_+_6157154_6157182	0.20200530685947896	ACAGUAU	ENSMUST00000149756.8|Tulp4|ENSMUSG00000034377.11|tubby like protein 4
mm39_v1_chr13_+_5911481_5911521	0.1992060608691431	ACAGUAU	ENSMUST00000000080.8|Klf6|ENSMUSG00000000078.8|Kruppel-like factor 6
mm39_v1_chr12_+_85043083_85043193	0.19911866227517414	ACAGUAU	ENSMUST00000168977.8|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1	ENSMUST00000021670.15|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1
mm39_v1_chr9_+_56982622_56982727	0.19803621819201178	ACAGUAU	ENSMUST00000167715.8|Sin3a|ENSMUSG00000042557.15|transcriptional regulator, SIN3A (yeast)
mm39_v1_chr6_+_128339882_128340022	0.1960868159589246	ACAGUAU	ENSMUST00000073316.13|Foxm1|ENSMUSG00000001517.15|forkhead box M1
mm39_v1_chr8_-_103512274_103512408	0.18746000535804622	ACAGUAU	ENSMUST00000075190.5|Cdh11|ENSMUSG00000031673.7|cadherin 11
mm39_v1_chr15_-_64184485_64184537	0.18607865845835755	ACAGUAU	ENSMUST00000177083.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000177371.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr5_-_121974913_121974927	0.18559638565593786	ACAGUAU	ENSMUST00000040308.14|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3	ENSMUST00000086310.8|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3
mm39_v1_chr13_-_107158535_107158652	0.18390124750571046	ACAGUAU	ENSMUST00000117539.8|Kif2a|ENSMUSG00000021693.21|kinesin family member 2A	ENSMUST00000122233.8|Kif2a|ENSMUSG00000021693.21|kinesin family member 2A	ENSMUST00000022204.16|Kif2a|ENSMUSG00000021693.21|kinesin family member 2A	ENSMUST00000159772.8|Kif2a|ENSMUSG00000021693.21|kinesin family member 2A
mm39_v1_chr16_+_55895786_55895855	0.1833969842169654	ACAGUAU	ENSMUST00000049128.11|Senp7|ENSMUSG00000052917.16|SUMO1/sentrin specific peptidase 7	ENSMUST00000089362.9|Senp7|ENSMUSG00000052917.16|SUMO1/sentrin specific peptidase 7	ENSMUST00000202799.4|Senp7|ENSMUSG00000052917.16|SUMO1/sentrin specific peptidase 7	ENSMUST00000201011.2|Senp7|ENSMUSG00000052917.16|SUMO1/sentrin specific peptidase 7	ENSMUST00000202000.2|Senp7|ENSMUSG00000052917.16|SUMO1/sentrin specific peptidase 7
mm39_v1_chr4_-_3938352_3938401	0.18191815897329938	ACAGUAU	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr6_+_113054314_113054343	0.18002064835372777	ACAGUAU	ENSMUST00000042889.12|Setd5|ENSMUSG00000034269.13|SET domain containing 5
mm39_v1_chr13_+_81031512_81031543	0.177239654151368	ACAGUAU	ENSMUST00000099356.10|Arrdc3|ENSMUSG00000074794.11|arrestin domain containing 3
mm39_v1_chr2_-_63928339_63928367	0.17583468505768887	ACAGUAU	ENSMUST00000131615.9|Fign|ENSMUSG00000075324.14|fidgetin
mm39_v1_chr8_-_32408864_32408913	0.1746953474591457	ACAGUAU	ENSMUST00000073884.7|Nrg1|ENSMUSG00000062991.10|neuregulin 1	ENSMUST00000238812.2|Nrg1|ENSMUSG00000062991.10|neuregulin 1
mm39_v1_chr11_-_78588194_78588205	0.17207924743681935	ACAGUAU	ENSMUST00000142739.8|Nlk|ENSMUSG00000017376.16|nemo like kinase
mm39_v1_chr15_+_10177709_10177741	0.17080177548642908	ACAGUAU	ENSMUST00000124470.8|Prlr|ENSMUSG00000005268.21|prolactin receptor
mm39_v1_chr2_+_156681927_156681952	0.16954189702088585	ACAGUAU	ENSMUST00000081335.13|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr12_+_83678987_83679099	0.16902240065523233	ACAGUAU	ENSMUST00000048155.16|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182618.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000183154.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182036.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25	ENSMUST00000182347.8|Rbm25|ENSMUSG00000010608.16|RNA binding motif protein 25
mm39_v1_chr1_-_23961379_23961508	0.1673088933854514	ACAGUAU	ENSMUST00000027339.14|Smap1|ENSMUSG00000026155.14|small ArfGAP 1
mm39_v1_chr5_+_134128543_134128635	0.16693013664182743	ACAGUAU	ENSMUST00000016088.9|Castor2|ENSMUSG00000015944.10|cytosolic arginine sensor for mTORC1 subunit 2
mm39_v1_chr13_+_84370405_84370483	0.1669186723640683	ACAGUAU	ENSMUST00000057495.10|Tmem161b|ENSMUSG00000035762.12|transmembrane protein 161B	ENSMUST00000225069.2|Tmem161b|ENSMUSG00000035762.12|transmembrane protein 161B
mm39_v1_chr7_+_64151435_64151454	0.16531966578650065	ACAGUAU	ENSMUST00000032732.15|Apba2|ENSMUSG00000030519.15|amyloid beta (A4) precursor protein-binding, family A, member 2
mm39_v1_chr8_-_37081091_37081102	0.16454424549674454	ACAGUAU	ENSMUST00000033923.14|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr12_+_108145997_108146089	0.1634048421967727	ACAGUAU	ENSMUST00000101055.5|Ccnk|ENSMUSG00000021258.11|cyclin K
mm39_v1_chr1_-_78173744_78173771	0.16200469239564544	ACAGUAU	ENSMUST00000087086.7|Pax3|ENSMUSG00000004872.16|paired box 3
mm39_v1_chr1_+_32211792_32211968	0.16057678442994017	ACAGUAU	ENSMUST00000027226.12|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000189878.2|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000188257.7|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000185666.2|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2
mm39_v1_chr4_-_128699838_128699966	0.15949780252718182	ACAGUAU	ENSMUST00000106072.9|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362	ENSMUST00000170934.3|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362
mm39_v1_chr9_+_21527462_21527473	0.15924793321006697	ACAGUAU	ENSMUST00000034707.15|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	ENSMUST00000098948.10|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm39_v1_chr7_+_16135112_16135158	0.1575573822669588	ACAGUAU	ENSMUST00000098789.5|Zc3h4|ENSMUSG00000059273.10|zinc finger CCCH-type containing 4	ENSMUST00000209289.2|Zc3h4|ENSMUSG00000059273.10|zinc finger CCCH-type containing 4
mm39_v1_chr19_+_28812474_28812541	0.15661698627911122	ACAGUAU	ENSMUST00000025875.5|Slc1a1|ENSMUSG00000024935.12|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm39_v1_chr5_+_16758777_16758795	0.1560795612050483	ACAGUAU	ENSMUST00000030683.8|Hgf|ENSMUSG00000028864.8|hepatocyte growth factor
mm39_v1_chr11_-_5331734_5331745	0.15596468163574434	ACAGUAU	ENSMUST00000172492.8|Znrf3|ENSMUSG00000041961.15|zinc and ring finger 3
mm39_v1_chr15_+_38869415_38869443	0.15240761131491534	ACAGUAU	ENSMUST00000179165.9|Fzd6|ENSMUSG00000022297.16|frizzled class receptor 6
mm39_v1_chr17_-_26727437_26727493	0.15039482213944924	ACAGUAU	ENSMUST00000236661.2|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1	ENSMUST00000025025.7|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1
mm39_v1_chr5_+_43390513_43390580	0.15030031900289098	ACAGUAU	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr10_-_5872386_5872405	0.14982801391979092	ACAGUAU	ENSMUST00000131996.8|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17	ENSMUST00000064225.14|Rgs17|ENSMUSG00000019775.18|regulator of G-protein signaling 17
mm39_v1_chr17_+_15720150_15720222	0.14878834835893692	ACAGUAU	ENSMUST00000159197.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000014911.12|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000162505.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000147081.9|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000118001.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000143924.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000119879.9|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000155051.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein	ENSMUST00000117593.8|Tbp|ENSMUSG00000014767.18|TATA box binding protein
mm39_v1_chr12_-_46865709_46865720	0.14620858074906115	ACAGUAU	ENSMUST00000021438.8|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr3_+_135144202_135144241	0.14478571781146224	ACAGUAU	ENSMUST00000166033.6|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3
mm39_v1_chr11_+_75623695_75623795	0.1418404431511966	ACAGUAU	ENSMUST00000067664.10|Ywhae|ENSMUSG00000020849.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm39_v1_chr6_-_83418656_83418666	0.14021122712614367	ACAGUAU	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr16_+_33504829_33504842	0.13940963936731257	ACAGUAU	ENSMUST00000152782.8|Heg1|ENSMUSG00000075254.13|heart development protein with EGF-like domains 1
mm39_v1_chr16_-_46317318_46317349	0.13922518915580118	ACAGUAU	ENSMUST00000023335.13|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3	ENSMUST00000023334.15|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3
mm39_v1_chr13_+_110039620_110039645	0.13906875458881965	ACAGUAU	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr9_+_100525501_100525594	0.1388044677348074	ACAGUAU	ENSMUST00000146312.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1	ENSMUST00000129269.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr11_-_79037213_79037236	0.1381916410267424	ACAGUAU	ENSMUST00000018478.11|Ksr1|ENSMUSG00000018334.19|kinase suppressor of ras 1	ENSMUST00000108264.8|Ksr1|ENSMUSG00000018334.19|kinase suppressor of ras 1
mm39_v1_chr12_+_16944896_16944904	0.13398070443472487	ACAGUAU	ENSMUST00000020904.8|Rock2|ENSMUSG00000020580.11|Rho-associated coiled-coil containing protein kinase 2
mm39_v1_chr14_+_21549798_21549853	0.1339323402615876	ACAGUAU	ENSMUST00000182855.8|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000182405.9|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000069648.14|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B
mm39_v1_chr16_+_8647959_8647966	0.1338886342014168	ACAGUAU	ENSMUST00000023150.7|1810013L24Rik|ENSMUSG00000022507.7|RIKEN cDNA 1810013L24 gene
mm39_v1_chr17_-_32074754_32074780	0.1328131830381639	ACAGUAU	ENSMUST00000024839.6|Sik1|ENSMUSG00000024042.8|salt inducible kinase 1
mm39_v1_chr19_+_26582450_26582519	0.13252940371061814	ACAGUAU	ENSMUST00000176769.9|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000208163.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000025862.15|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	ENSMUST00000176030.8|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr17_+_86475205_86475223	0.130738964069809	ACAGUAU	ENSMUST00000097275.9|Prkce|ENSMUSG00000045038.15|protein kinase C, epsilon
mm39_v1_chr2_-_75534985_75535023	0.1268331785467924	ACAGUAU	ENSMUST00000102672.5|Nfe2l2|ENSMUSG00000015839.7|nuclear factor, erythroid derived 2, like 2
mm39_v1_chr12_+_4642987_4643091	0.12569533221197363	ACAGUAU	ENSMUST00000062580.8|Itsn2|ENSMUSG00000020640.11|intersectin 2	ENSMUST00000220311.2|Itsn2|ENSMUSG00000020640.11|intersectin 2
mm39_v1_chr4_+_122889737_122889753	0.12558432682056594	ACAGUAU	ENSMUST00000106252.9|Mycl|ENSMUSG00000028654.14|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived
mm39_v1_chr4_-_126323291_126323349	0.1253470986597807	ACAGUAU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr12_-_111874489_111874559	0.12509327262379955	ACAGUAU	ENSMUST00000054815.15|Ppp1r13b|ENSMUSG00000021285.16|protein phosphatase 1, regulatory subunit 13B
mm39_v1_chr6_+_38410848_38410901	0.1233252529482137	ACAGUAU	ENSMUST00000160583.8|Ubn2|ENSMUSG00000038538.18|ubinuclein 2
mm39_v1_chr4_-_134431534_134431605	0.122066242353603	ACAGUAU	ENSMUST00000054096.13|Man1c1|ENSMUSG00000037306.14|mannosidase, alpha, class 1C, member 1	ENSMUST00000038628.4|Man1c1|ENSMUSG00000037306.14|mannosidase, alpha, class 1C, member 1
mm39_v1_chr4_-_53159885_53159900	0.12195461259122427	ACAGUAU	ENSMUST00000030010.4|Abca1|ENSMUSG00000015243.5|ATP-binding cassette, sub-family A (ABC1), member 1
mm39_v1_chr4_-_70453140_70453224	0.12185910783402722	ACAGUAU	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chrX_-_107877909_107877987	0.12088994742726877	ACAGUAU	ENSMUST00000101283.4|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3	ENSMUST00000150434.8|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3
mm39_v1_chr4_-_138641225_138641296	0.12066612218115785	ACAGUAU	ENSMUST00000097830.4|Otud3|ENSMUSG00000041161.9|OTU domain containing 3
mm39_v1_chr16_+_42727926_42728047	0.12054817496825727	ACAGUAU	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr6_-_90787100_90787142	0.12008102411273275	ACAGUAU	ENSMUST00000101151.10|Iqsec1|ENSMUSG00000034312.16|IQ motif and Sec7 domain 1
mm39_v1_chr2_+_154278357_154278455	0.11921989334771241	ACAGUAU	ENSMUST00000109725.8|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2	ENSMUST00000099178.10|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2	ENSMUST00000045270.15|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2	ENSMUST00000109724.2|Cbfa2t2|ENSMUSG00000038533.16|CBFA2/RUNX1 translocation partner 2
mm39_v1_chr1_+_23801007_23801080	0.11859555453158163	ACAGUAU	ENSMUST00000063663.6|B3gat2|ENSMUSG00000026156.9|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm39_v1_chr13_-_103470937_103471007	0.11819907719985619	ACAGUAU	ENSMUST00000167058.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4	ENSMUST00000164111.2|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr3_-_113423774_113423798	0.11720409473383532	ACAGUAU	ENSMUST00000092154.10|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3	ENSMUST00000106536.8|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3	ENSMUST00000106535.2|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3
mm39_v1_chr9_+_118335294_118335357	0.11713144809424082	ACAGUAU	ENSMUST00000084820.6|Golga4|ENSMUSG00000038708.11|golgi autoantigen, golgin subfamily a, 4
mm39_v1_chr16_+_13176238_13176334	0.1157529192359724	ACAGUAU	ENSMUST00000149359.2|Mrtfb|ENSMUSG00000009569.15|myocardin related transcription factor B
mm39_v1_chr9_-_50920236_50920380	0.1155824332240419	ACAGUAU	ENSMUST00000176824.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000176663.8|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2	ENSMUST00000041375.11|Sik2|ENSMUSG00000037112.17|salt inducible kinase 2
mm39_v1_chr4_+_137589548_137589559	0.11538793976708057	ACAGUAU	ENSMUST00000102518.10|Ece1|ENSMUSG00000057530.15|endothelin converting enzyme 1
mm39_v1_chr7_+_116980173_116980249	0.11416222607570548	ACAGUAU	ENSMUST00000032892.7|Xylt1|ENSMUSG00000030657.12|xylosyltransferase 1
mm39_v1_chr4_-_44167509_44167609	0.11379508760723218	ACAGUAU	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr6_-_56774622_56774741	0.1133561046572375	ACAGUAU	ENSMUST00000114323.8|Kbtbd2|ENSMUSG00000059486.12|kelch repeat and BTB (POZ) domain containing 2
mm39_v1_chr7_+_92390811_92390923	0.1104745509090762	ACAGUAU	ENSMUST00000032879.15|Rab30|ENSMUSG00000030643.15|RAB30, member RAS oncogene family
mm39_v1_chr10_+_88215079_88215164	0.1100037978287152	ACAGUAU	ENSMUST00000130301.8|Gnptab|ENSMUSG00000035311.17|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	ENSMUST00000020251.10|Gnptab|ENSMUSG00000035311.17|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm39_v1_chr18_-_47501897_47501945	0.1099408625644893	ACAGUAU	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr15_-_58078274_58078328	0.10641225701333502	ACAGUAU	ENSMUST00000022986.8|Fbxo32|ENSMUSG00000022358.8|F-box protein 32
mm39_v1_chr13_-_93636224_93636333	0.1053674523493803	ACAGUAU	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr19_+_41471067_41471128	0.10303055565489384	ACAGUAU	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr8_+_91796680_91796751	0.10265825646660175	ACAGUAU	ENSMUST00000034091.8|Rbl2|ENSMUSG00000031666.16|RB transcriptional corepressor like 2	ENSMUST00000211136.2|Rbl2|ENSMUSG00000031666.16|RB transcriptional corepressor like 2
mm39_v1_chr2_-_167334746_167334812	0.10221653270763738	ACAGUAU	ENSMUST00000109211.9|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2	ENSMUST00000057627.16|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2
mm39_v1_chr10_-_128481833_128481881	0.10197820845317411	ACAGUAU	ENSMUST00000133342.10|Ikzf4|ENSMUSG00000002578.19|IKAROS family zinc finger 4
mm39_v1_chr4_-_133480922_133480977	0.10052981147187308	ACAGUAU	ENSMUST00000145664.9|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)	ENSMUST00000105897.10|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)
mm39_v1_chrX_-_156381652_156381711	0.10040812582750552	ACAGUAU	ENSMUST00000149249.2|Mbtps2|ENSMUSG00000046873.19|membrane-bound transcription factor peptidase, site 2	ENSMUST00000058098.15|Mbtps2|ENSMUSG00000046873.19|membrane-bound transcription factor peptidase, site 2
mm39_v1_chr2_+_69553141_69553189	0.09824833936786273	ACAGUAU	ENSMUST00000090858.10|Ppig|ENSMUSG00000042133.17|peptidyl-prolyl isomerase G (cyclophilin G)
mm39_v1_chr11_+_77985486_77985504	0.0928051177732182	ACAGUAU	ENSMUST00000073705.12|Fam222b|ENSMUSG00000037750.17|family with sequence similarity 222, member B
mm39_v1_chrX_-_37653396_37653432	0.09257262290438882	ACAGUAU	ENSMUST00000016681.15|Cul4b|ENSMUSG00000031095.16|cullin 4B
mm39_v1_chr6_-_35516700_35516823	0.08826681399102707	ACAGUAU	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr19_-_47452840_47452894	0.08690256288534147	ACAGUAU	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr1_+_127701901_127701975	0.0863706611485161	ACAGUAU	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr11_+_77576981_77577005	0.08616484497026869	ACAGUAU	ENSMUST00000100802.11|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2	ENSMUST00000181023.2|Nufip2|ENSMUSG00000037857.17|nuclear fragile X mental retardation protein interacting protein 2
mm39_v1_chr5_-_136596299_136596390	0.08353921879239659	ACAGUAU	ENSMUST00000004097.16|Cux1|ENSMUSG00000029705.18|cut-like homeobox 1
mm39_v1_chr9_+_72439496_72439553	0.08305564532577182	ACAGUAU	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr3_+_88049633_88049790	0.0819284415033234	ACAGUAU	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr5_+_150183201_150183232	0.08189740110591237	ACAGUAU	ENSMUST00000087204.9|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr17_-_80787398_80787398	0.08175596910667268	ACAGUAU	ENSMUST00000068714.7|Sos1|ENSMUSG00000024241.8|SOS Ras/Rac guanine nucleotide exchange factor 1
mm39_v1_chr2_-_45003270_45003296	0.07996140494977068	ACAGUAU	ENSMUST00000202935.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000068415.11|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000127520.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr13_+_43551851_43551878	0.07973798676833296	ACAGUAU	ENSMUST00000071926.5|Nol7|ENSMUSG00000063200.5|nucleolar protein 7	ENSMUST00000222499.2|Nol7|ENSMUSG00000063200.5|nucleolar protein 7
mm39_v1_chr1_-_63153675_63153826	0.0796389612245218	ACAGUAU	ENSMUST00000097718.9|Ino80d|ENSMUSG00000040865.16|INO80 complex subunit D
mm39_v1_chr1_-_176102840_176102875	0.07956289034053805	ACAGUAU	ENSMUST00000111166.2|Pld5|ENSMUSG00000055214.16|phospholipase D family, member 5	ENSMUST00000065967.14|Pld5|ENSMUSG00000055214.16|phospholipase D family, member 5
mm39_v1_chr1_-_136273811_136273884	0.07953664036498315	ACAGUAU	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr8_-_85414528_85414539	0.07933587287957669	ACAGUAU	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr4_-_99717359_99717428	0.07787452473616492	ACAGUAU	ENSMUST00000146258.2|Itgb3bp|ENSMUSG00000028549.18|integrin beta 3 binding protein (beta3-endonexin)
mm39_v1_chr1_+_65225834_65225881	0.07740378120781294	ACAGUAU	ENSMUST00000081154.14|Pikfyve|ENSMUSG00000025949.17|phosphoinositide kinase, FYVE type zinc finger containing
mm39_v1_chr9_-_121534025_121534107	0.07541345819862606	ACAGUAU	ENSMUST00000078547.12|Sec22c|ENSMUSG00000061536.14|SEC22 homolog C, vesicle trafficking protein	ENSMUST00000111560.10|Sec22c|ENSMUSG00000061536.14|SEC22 homolog C, vesicle trafficking protein
mm39_v1_chr10_-_7831979_7832035	0.07532773309109186	ACAGUAU	ENSMUST00000146444.8|Tab2|ENSMUSG00000015755.17|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm39_v1_chr14_+_33645539_33645560	0.07455829900156706	ACAGUAU	ENSMUST00000168727.3|Gdf10|ENSMUSG00000021943.8|growth differentiation factor 10
mm39_v1_chr18_+_62086122_62086192	0.0745012683795705	ACAGUAU	ENSMUST00000051720.6|Sh3tc2|ENSMUSG00000045629.9|SH3 domain and tetratricopeptide repeats 2	ENSMUST00000235860.2|Sh3tc2|ENSMUSG00000045629.9|SH3 domain and tetratricopeptide repeats 2
mm39_v1_chr13_+_14238361_14238407	0.07383701513637528	ACAGUAU	ENSMUST00000129488.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110536.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110534.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000039538.15|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110533.2|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)
mm39_v1_chr3_+_60408600_60408663	0.07230825252973797	ACAGUAU	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr5_+_107977965_107978041	0.07166195574283475	ACAGUAU	ENSMUST00000072578.8|Ube2d2b|ENSMUSG00000063447.8|ubiquitin-conjugating enzyme E2D 2B
mm39_v1_chr4_+_132738787_132738817	0.07041903804492491	ACAGUAU	ENSMUST00000105915.8|Ahdc1|ENSMUSG00000037692.15|AT hook, DNA binding motif, containing 1	ENSMUST00000105916.8|Ahdc1|ENSMUSG00000037692.15|AT hook, DNA binding motif, containing 1
mm39_v1_chr2_-_24809583_24809628	0.07007674154121436	ACAGUAU	ENSMUST00000046227.12|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000114432.9|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000091348.11|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000102938.10|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000150379.2|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000152161.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000147147.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1
mm39_v1_chr5_+_89034666_89034684	0.06719233421570577	ACAGUAU	ENSMUST00000148750.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr11_-_51647290_51647445	0.06707890287099755	ACAGUAU	ENSMUST00000109097.9|Sec24a|ENSMUSG00000036391.17|Sec24 related gene family, member A (S. cerevisiae)
mm39_v1_chr5_-_73413888_73413979	0.06421332142890429	ACAGUAU	ENSMUST00000101127.12|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr10_-_20600797_20600824	0.06382651788365484	ACAGUAU	ENSMUST00000020165.14|Pde7b|ENSMUSG00000019990.16|phosphodiesterase 7B
mm39_v1_chr10_+_25235696_25235742	0.0637618141955234	ACAGUAU	ENSMUST00000053748.16|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chrX_-_73129195_73129296	0.06375235832078463	ACAGUAU	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chr17_+_26934617_26934698	0.06316868543922442	ACAGUAU	ENSMUST00000062519.14|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000144221.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000142539.8|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000151681.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor
mm39_v1_chr2_-_102231208_102231314	0.06298241623394664	ACAGUAU	ENSMUST00000102573.8|Trim44|ENSMUSG00000027189.17|tripartite motif-containing 44
mm39_v1_chr11_-_86248395_86248442	0.06274765715554424	ACAGUAU	ENSMUST00000043624.9|Med13|ENSMUSG00000034297.15|mediator complex subunit 13
mm39_v1_chr10_-_30531768_30531807	0.06182634416527981	ACAGUAU	ENSMUST00000092610.12|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr7_-_48530777_48530794	0.061495586190074024	ACAGUAU	ENSMUST00000058745.15|E2f8|ENSMUSG00000046179.18|E2F transcription factor 8
mm39_v1_chr8_-_70892204_70892261	0.060795736280267576	ACAGUAU	ENSMUST00000076615.6|Crtc1|ENSMUSG00000003575.14|CREB regulated transcription coactivator 1
mm39_v1_chr17_+_13980764_13980936	0.0604691434843565	ACAGUAU	ENSMUST00000139347.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000156591.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000170827.9|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000139666.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000137708.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000137784.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor	ENSMUST00000150848.8|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor
mm39_v1_chr11_-_23845207_23845280	0.06037286169089893	ACAGUAU	ENSMUST00000102863.3|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma	ENSMUST00000020513.10|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma
mm39_v1_chr10_+_81128795_81128839	0.06029493271231162	ACAGUAU	ENSMUST00000163075.8|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	ENSMUST00000105327.10|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	ENSMUST00000045469.15|Pip5k1c|ENSMUSG00000034902.18|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm39_v1_chr15_-_28025920_28025970	0.05882467296453364	ACAGUAU	ENSMUST00000090247.7|Trio|ENSMUSG00000022263.11|triple functional domain (PTPRF interacting)
mm39_v1_chrX_-_63320543_63320608	0.058612892115890734	ACAGUAU	ENSMUST00000114679.2|Slitrk4|ENSMUSG00000046699.15|SLIT and NTRK-like family, member 4	ENSMUST00000069926.14|Slitrk4|ENSMUSG00000046699.15|SLIT and NTRK-like family, member 4
mm39_v1_chr14_-_122202599_122202610	0.05713591751469459	ACAGUAU	ENSMUST00000049872.9|Gpr183|ENSMUSG00000051212.9|G protein-coupled receptor 183
mm39_v1_chr19_-_37184692_37184907	0.05713056586213536	ACAGUAU	ENSMUST00000132580.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000079754.11|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000136286.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126188.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126781.2|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3
mm39_v1_chr2_+_127967951_127967976	0.05650104364840009	ACAGUAU	ENSMUST00000089634.12|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000019281.14|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000110341.9|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103211.8|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103210.2|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)
mm39_v1_chr2_+_177760768_177760955	0.055361229821380906	ACAGUAU	ENSMUST00000108917.8|Phactr3|ENSMUSG00000027525.19|phosphatase and actin regulator 3
mm39_v1_chr19_-_29783389_29783389	0.05445793706750152	ACAGUAU	ENSMUST00000177155.8|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr7_+_48896560_48896592	0.0544193531811854	ACAGUAU	ENSMUST00000184945.8|Nav2|ENSMUSG00000052512.18|neuron navigator 2
mm39_v1_chr10_+_3690348_3690432	0.054305630715334244	ACAGUAU	ENSMUST00000120274.8|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm39_v1_chr4_+_57434247_57434369	0.05420859853700332	ACAGUAU	ENSMUST00000102905.8|Pakap|ENSMUSG00000090053.10|paralemmin A kinase anchor protein
mm39_v1_chr18_-_35348049_35348092	0.05403566812278107	ACAGUAU	ENSMUST00000091636.5|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2	ENSMUST00000236680.2|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2
mm39_v1_chr3_+_52175757_52175827	0.0538350921985847	ACAGUAU	ENSMUST00000053764.7|Foxo1|ENSMUSG00000044167.7|forkhead box O1
mm39_v1_chr4_-_33248499_33248519	0.05367115789535192	ACAGUAU	ENSMUST00000049357.10|Pnrc1|ENSMUSG00000040128.10|proline-rich nuclear receptor coactivator 1
mm39_v1_chr11_-_28534260_28534325	0.05344404729198655	ACAGUAU	ENSMUST00000093253.10|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000109502.9|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000042534.15|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A
mm39_v1_chr13_+_48414582_48414704	0.0533036003739083	ACAGUAU	ENSMUST00000021810.3|Id4|ENSMUSG00000021379.3|inhibitor of DNA binding 4
mm39_v1_chr14_+_69266566_69266687	0.05275425499872549	ACAGUAU	ENSMUST00000014957.10|Stc1|ENSMUSG00000014813.10|stanniocalcin 1
mm39_v1_chr9_+_13739003_13739075	0.052418537648098784	ACAGUAU	ENSMUST00000059579.12|Fam76b|ENSMUSG00000037808.14|family with sequence similarity 76, member B
mm39_v1_chr4_+_19605451_19605451	0.052011796028016706	ACAGUAU	ENSMUST00000108250.3|Gm12353|ENSMUSG00000078772.3|predicted gene 12353
mm39_v1_chr4_+_62883796_62883854	0.050818313541360564	ACAGUAU	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr1_+_104696235_104696254	0.0504361632993421	ACAGUAU	ENSMUST00000062528.9|Cdh20|ENSMUSG00000050840.9|cadherin 20
mm39_v1_chr2_-_22930188_22930253	0.050218612417289595	ACAGUAU	ENSMUST00000114544.10|Abi1|ENSMUSG00000058835.15|abl interactor 1	ENSMUST00000139038.8|Abi1|ENSMUSG00000058835.15|abl interactor 1	ENSMUST00000126112.8|Abi1|ENSMUSG00000058835.15|abl interactor 1	ENSMUST00000178908.2|Abi1|ENSMUSG00000058835.15|abl interactor 1	ENSMUST00000078977.14|Abi1|ENSMUSG00000058835.15|abl interactor 1	ENSMUST00000140164.8|Abi1|ENSMUSG00000058835.15|abl interactor 1	ENSMUST00000149719.8|Abi1|ENSMUSG00000058835.15|abl interactor 1
mm39_v1_chr17_+_30224003_30224074	0.050171463966293954	ACAGUAU	ENSMUST00000057897.10|Zfand3|ENSMUSG00000044477.13|zinc finger, AN1-type domain 3
mm39_v1_chr2_+_145627900_145628073	0.050086668892882664	ACAGUAU	ENSMUST00000110005.8|Rin2|ENSMUSG00000001768.17|Ras and Rab interactor 2	ENSMUST00000094480.11|Rin2|ENSMUSG00000001768.17|Ras and Rab interactor 2
mm39_v1_chr6_-_28261881_28261942	0.05005319157837418	ACAGUAU	ENSMUST00000115320.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000123098.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000115321.9|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000155494.2|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800
mm39_v1_chrX_-_12628309_12628318	0.049972928492572746	ACAGUAU	ENSMUST00000096495.11|Med14|ENSMUSG00000064127.14|mediator complex subunit 14	ENSMUST00000076016.6|Med14|ENSMUSG00000064127.14|mediator complex subunit 14
mm39_v1_chr5_+_144037171_144037254	0.04996031067451208	ACAGUAU	ENSMUST00000041804.8|Lmtk2|ENSMUSG00000038970.8|lemur tyrosine kinase 2
mm39_v1_chr2_-_9883391_9883418	0.04938273482904007	ACAGUAU	ENSMUST00000102976.4|Gata3|ENSMUSG00000015619.11|GATA binding protein 3
mm39_v1_chr3_+_61269059_61269059	0.04935180581716446	ACAGUAU	ENSMUST00000049064.4|Rap2b|ENSMUSG00000036894.4|RAP2B, member of RAS oncogene family
mm39_v1_chr19_-_17814984_17815006	0.04893510534452076	ACAGUAU	ENSMUST00000025618.16|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5	ENSMUST00000050715.10|Pcsk5|ENSMUSG00000024713.17|proprotein convertase subtilisin/kexin type 5
mm39_v1_chr8_+_23349543_23349570	0.04686964472276507	ACAGUAU	ENSMUST00000238975.2|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000110696.8|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000044331.7|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A
mm39_v1_chr5_-_143717970_143718072	0.04657666004366057	ACAGUAU	ENSMUST00000053287.6|Usp42|ENSMUSG00000051306.8|ubiquitin specific peptidase 42
mm39_v1_chr11_-_95200382_95200428	0.04597967304561583	ACAGUAU	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr10_+_95776543_95776647	0.04505749529548363	ACAGUAU	ENSMUST00000053484.8|Eea1|ENSMUSG00000036499.10|early endosome antigen 1
mm39_v1_chrX_+_18028814_18028897	0.04489408284677358	ACAGUAU	ENSMUST00000044484.13|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A	ENSMUST00000052368.9|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A
mm39_v1_chr14_-_103336990_103337007	0.04487755597831968	ACAGUAU	ENSMUST00000022720.15|Fbxl3|ENSMUSG00000022124.16|F-box and leucine-rich repeat protein 3	ENSMUST00000144141.8|Fbxl3|ENSMUSG00000022124.16|F-box and leucine-rich repeat protein 3
mm39_v1_chr13_-_55718899_55718939	0.04410176266185619	ACAGUAU	ENSMUST00000225240.3|Fam193b|ENSMUSG00000021495.11|family with sequence similarity 193, member B	ENSMUST00000021957.8|Fam193b|ENSMUSG00000021495.11|family with sequence similarity 193, member B
mm39_v1_chr7_-_67022520_67022609	0.044046831189360695	ACAGUAU	ENSMUST00000156690.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000107476.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000076325.12|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000032776.15|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000133074.2|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A
mm39_v1_chr4_-_126150066_126150163	0.0432908847258698	ACAGUAU	ENSMUST00000122129.8|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1	ENSMUST00000061143.15|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1	ENSMUST00000106132.3|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1
mm39_v1_chr10_+_98750978_98751034	0.04279676592544496	ACAGUAU	ENSMUST00000020107.8|Atp2b1|ENSMUSG00000019943.11|ATPase, Ca++ transporting, plasma membrane 1
mm39_v1_chrX_+_98086187_98086220	0.04269273117434481	ACAGUAU	ENSMUST00000036606.14|Stard8|ENSMUSG00000031216.14|START domain containing 8
mm39_v1_chr13_-_64422693_64422761	0.042187695464842905	ACAGUAU	ENSMUST00000109770.2|Cdc14b|ENSMUSG00000033102.16|CDC14 cell division cycle 14B
mm39_v1_chr5_-_134776101_134776177	0.04160293213373723	ACAGUAU	ENSMUST00000015138.13|Eln|ENSMUSG00000029675.13|elastin
mm39_v1_chr5_+_76736514_76736570	0.04081600538748982	ACAGUAU	ENSMUST00000121979.8|Cep135|ENSMUSG00000036403.16|centrosomal protein 135
mm39_v1_chrX_-_13712746_13712826	0.039534918839558904	ACAGUAU	ENSMUST00000115436.9|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000033321.11|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	ENSMUST00000115438.10|Cask|ENSMUSG00000031012.18|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm39_v1_chr10_-_116984386_116984452	0.03860322321164757	ACAGUAU	ENSMUST00000020381.5|Frs2|ENSMUSG00000020170.5|fibroblast growth factor receptor substrate 2
mm39_v1_chr2_-_59955995_59956119	0.038524891401024254	ACAGUAU	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr14_-_24295988_24295988	0.037609119987674834	ACAGUAU	ENSMUST00000073687.13|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5	ENSMUST00000090398.11|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5
mm39_v1_chr14_+_67470884_67471035	0.03749264191554892	ACAGUAU	ENSMUST00000176161.8|Ebf2|ENSMUSG00000022053.14|early B cell factor 2
mm39_v1_chr3_-_32670628_32670734	0.037364046605214564	ACAGUAU	ENSMUST00000193050.2|Gnb4|ENSMUSG00000027669.15|guanine nucleotide binding protein (G protein), beta 4	ENSMUST00000108234.8|Gnb4|ENSMUSG00000027669.15|guanine nucleotide binding protein (G protein), beta 4	ENSMUST00000155737.8|Gnb4|ENSMUSG00000027669.15|guanine nucleotide binding protein (G protein), beta 4
mm39_v1_chr2_-_79287095_79287102	0.034947109830537386	ACAGUAU	ENSMUST00000041099.5|Neurod1|ENSMUSG00000034701.10|neurogenic differentiation 1
mm39_v1_chr19_-_34856853_34856864	0.03475736983669242	ACAGUAU	ENSMUST00000036584.13|Pank1|ENSMUSG00000033610.17|pantothenate kinase 1
mm39_v1_chr3_-_101017594_101017652	0.034631395379974846	ACAGUAU	ENSMUST00000102694.4|Ptgfrn|ENSMUSG00000027864.10|prostaglandin F2 receptor negative regulator
mm39_v1_chr10_+_80972089_80972105	0.03382005652756112	ACAGUAU	ENSMUST00000048128.15|Zbtb7a|ENSMUSG00000035011.16|zinc finger and BTB domain containing 7a
mm39_v1_chr5_-_36853281_36853386	0.03338683964171992	ACAGUAU	ENSMUST00000031091.13|D5Ertd579e|ENSMUSG00000029190.20|DNA segment, Chr 5, ERATO Doi 579, expressed	ENSMUST00000140653.2|D5Ertd579e|ENSMUSG00000029190.20|DNA segment, Chr 5, ERATO Doi 579, expressed
mm39_v1_chr15_-_83989801_83989955	0.03321973575088359	ACAGUAU	ENSMUST00000229826.2|Sult4a1|ENSMUSG00000018865.10|sulfotransferase family 4A, member 1	ENSMUST00000082365.6|Sult4a1|ENSMUSG00000018865.10|sulfotransferase family 4A, member 1
mm39_v1_chr7_-_134539993_134540159	0.03234840756758817	ACAGUAU	ENSMUST00000171394.3|Insyn2a|ENSMUSG00000073805.6|inhibitory synaptic factor 2A
mm39_v1_chr11_+_51153941_51154024	0.03194064842375771	ACAGUAU	ENSMUST00000093132.13|Clk4|ENSMUSG00000020385.17|CDC like kinase 4	ENSMUST00000109113.8|Clk4|ENSMUSG00000020385.17|CDC like kinase 4
mm39_v1_chr6_-_37276885_37276919	0.031220502970756823	ACAGUAU	ENSMUST00000101532.10|Dgki|ENSMUSG00000038665.16|diacylglycerol kinase, iota
mm39_v1_chr1_-_184731672_184731767	0.03113975018708094	ACAGUAU	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr1_-_132953068_132953154	0.030824262879504922	ACAGUAU	ENSMUST00000186617.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067429.10|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067398.13|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000188090.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr11_+_53241561_53241660	0.030752122586452536	ACAGUAU	ENSMUST00000060945.12|Aff4|ENSMUSG00000049470.14|AF4/FMR2 family, member 4
mm39_v1_chr4_+_47353217_47353226	0.02921447547592125	ACAGUAU	ENSMUST00000007757.15|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr1_-_152642032_152642069	0.029175984917525526	ACAGUAU	ENSMUST00000111859.8|Rgl1|ENSMUSG00000026482.14|ral guanine nucleotide dissociation stimulator,-like 1
mm39_v1_chr8_-_81466126_81466126	0.029069678490589647	ACAGUAU	ENSMUST00000043359.9|Smarca5|ENSMUSG00000031715.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm39_v1_chr8_+_88925821_88925852	0.028471327726234428	ACAGUAU	ENSMUST00000066748.10|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000119033.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000118952.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr4_+_130390588_130390632	0.02845849881000867	ACAGUAU	ENSMUST00000030315.13|Pum1|ENSMUSG00000028580.16|pumilio RNA-binding family member 1
mm39_v1_chr2_+_121697398_121697478	0.027602901849624828	ACAGUAU	ENSMUST00000110586.10|Golm2|ENSMUSG00000060227.16|golgi membrane protein 2	ENSMUST00000078752.10|Golm2|ENSMUSG00000060227.16|golgi membrane protein 2
mm39_v1_chr10_+_127478844_127478914	0.027533733237782215	ACAGUAU	ENSMUST00000092074.12|Stat6|ENSMUSG00000002147.19|signal transducer and activator of transcription 6	ENSMUST00000120279.2|Stat6|ENSMUSG00000002147.19|signal transducer and activator of transcription 6
mm39_v1_chr1_+_15382676_15382676	0.026685881563223986	ACAGUAU	ENSMUST00000170146.3|Kcnb2|ENSMUSG00000092083.5|potassium voltage gated channel, Shab-related subfamily, member 2
mm39_v1_chr15_+_85619958_85620010	0.026553521229569443	ACAGUAU	ENSMUST00000109422.8|Ppara|ENSMUSG00000022383.14|peroxisome proliferator activated receptor alpha
mm39_v1_chr4_+_65042411_65042411	0.02628192877019365	ACAGUAU	ENSMUST00000084501.4|Pappa|ENSMUSG00000028370.8|pregnancy-associated plasma protein A
mm39_v1_chr1_+_191058109_191058181	0.025009814264673882	ACAGUAU	ENSMUST00000027940.6|Pacc1|ENSMUSG00000026627.8|proton activated chloride channel 1
mm39_v1_chr2_-_104324745_104324809	0.024904320095358114	ACAGUAU	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr13_+_55840888_55840964	0.024783006788441187	ACAGUAU	ENSMUST00000057844.10|B230219D22Rik|ENSMUSG00000045767.10|RIKEN cDNA B230219D22 gene
mm39_v1_chr14_+_4230569_4230642	0.024716494665392857	ACAGUAU	ENSMUST00000090543.6|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr6_+_17463748_17463808	0.024332493735880187	ACAGUAU	ENSMUST00000115443.8|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr5_+_108416763_108416790	0.02388908979757899	ACAGUAU	ENSMUST00000031190.5|Dr1|ENSMUSG00000029265.5|down-regulator of transcription 1
mm39_v1_chr12_-_14202041_14202070	0.023841395894269767	ACAGUAU	ENSMUST00000020926.8|Lratd1|ENSMUSG00000020607.8|LRAT domain containing 1
mm39_v1_chr3_-_97134680_97134738	0.02371061574272219	ACAGUAU	ENSMUST00000046521.14|Bcl9|ENSMUSG00000038256.16|B cell CLL/lymphoma 9
mm39_v1_chr9_+_35122451_35122520	0.023635971320041655	ACAGUAU	ENSMUST00000034541.12|Srpr|ENSMUSG00000032042.12|signal recognition particle receptor ('docking protein')
mm39_v1_chr9_-_114393406_114393437	0.02361031840791951	ACAGUAU	ENSMUST00000111816.3|Trim71|ENSMUSG00000079259.3|tripartite motif-containing 71
mm39_v1_chr11_+_105480796_105480857	0.022258833801234952	ACAGUAU	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr2_-_34262012_34262056	0.022019386831551746	ACAGUAU	ENSMUST00000113132.9|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3	ENSMUST00000040638.15|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3
mm39_v1_chr8_-_81741495_81741569	0.02198926028304835	ACAGUAU	ENSMUST00000042724.8|Usp38|ENSMUSG00000038250.10|ubiquitin specific peptidase 38
mm39_v1_chr1_-_134260666_134260666	0.021758459766865246	ACAGUAU	ENSMUST00000168515.8|Ppfia4|ENSMUSG00000026458.14|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	ENSMUST00000189361.2|Ppfia4|ENSMUSG00000026458.14|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
mm39_v1_chr14_+_120513076_120513094	0.020987888546997107	ACAGUAU	ENSMUST00000088419.13|Mbnl2|ENSMUSG00000022139.18|muscleblind like splicing factor 2
mm39_v1_chr7_+_122723365_122723446	0.020889324878414738	ACAGUAU	ENSMUST00000205514.2|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a	ENSMUST00000094053.7|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a
mm39_v1_chr9_-_96634874_96634924	0.020001506573560677	ACAGUAU	ENSMUST00000152594.8|Zbtb38|ENSMUSG00000040433.17|zinc finger and BTB domain containing 38
mm39_v1_chr1_+_105918383_105918450	0.019925233250519127	ACAGUAU	ENSMUST00000119166.8|Zcchc2|ENSMUSG00000038866.16|zinc finger, CCHC domain containing 2
mm39_v1_chr4_-_151946219_151946333	0.01975217690087678	ACAGUAU	ENSMUST00000097774.9|Camta1|ENSMUSG00000014592.22|calmodulin binding transcription activator 1
mm39_v1_chr17_+_28128307_28128532	0.019222131943375943	ACAGUAU	ENSMUST00000233525.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000025058.15|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1	ENSMUST00000233866.2|Anks1|ENSMUSG00000024219.17|ankyrin repeat and SAM domain containing 1
mm39_v1_chr7_-_65020955_65021041	0.01873852192704994	ACAGUAU	ENSMUST00000102592.10|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr15_+_96185399_96185487	0.01863992367523764	ACAGUAU	ENSMUST00000134985.9|Arid2|ENSMUSG00000033237.20|AT rich interactive domain 2 (ARID, RFX-like)	ENSMUST00000096250.5|Arid2|ENSMUSG00000033237.20|AT rich interactive domain 2 (ARID, RFX-like)
mm39_v1_chr8_+_96078886_96078957	0.01832065087680498	ACAGUAU	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr15_-_73056713_73056822	0.018297439018088127	ACAGUAU	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr9_+_64142483_64142483	0.017703728627374602	ACAGUAU	ENSMUST00000039011.4|Uchl4|ENSMUSG00000035337.4|ubiquitin carboxyl-terminal esterase L4
mm39_v1_chr2_+_79465696_79465729	0.017436925189731802	ACAGUAU	ENSMUST00000111785.9|Itprid2|ENSMUSG00000027007.17|ITPR interacting domain containing 2
mm39_v1_chr2_-_10053381_10053432	0.01737676555187895	ACAGUAU	ENSMUST00000026888.11|Taf3|ENSMUSG00000025782.13|TATA-box binding protein associated factor 3
mm39_v1_chr2_+_124452493_124452534	0.017204850833829968	ACAGUAU	ENSMUST00000103239.10|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	ENSMUST00000103240.9|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm39_v1_chr2_-_25982160_25982189	0.016984625782593625	ACAGUAU	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chr3_-_84212069_84212116	0.01678605398738494	ACAGUAU	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr7_-_132616977_132617058	0.016319487951520897	ACAGUAU	ENSMUST00000169570.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr5_-_68004743_68004781	0.015586782067999244	ACAGUAU	ENSMUST00000072971.13|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113652.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000113651.8|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	ENSMUST00000037380.15|Atp8a1|ENSMUSG00000037685.16|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm39_v1_chr9_+_78020554_78020659	0.015444971483349841	ACAGUAU	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr16_+_33201164_33201206	0.014144796251991972	ACAGUAU	ENSMUST00000165418.9|Zfp148|ENSMUSG00000022811.18|zinc finger protein 148
mm39_v1_chr2_-_63014622_63014681	0.013935103652668309	ACAGUAU	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chrX_-_104973003_104973014	0.013502668953770324	ACAGUAU	ENSMUST00000130980.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000113573.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr11_-_119438569_119438585	0.013031411646102779	ACAGUAU	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chr8_+_12445287_12445295	0.012186160202811063	ACAGUAU	ENSMUST00000180353.2|Sox1|ENSMUSG00000096014.2|SRY (sex determining region Y)-box 1
mm39_v1_chrX_+_81992467_81992521	0.012055553267281891	ACAGUAU	ENSMUST00000114000.8|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy
mm39_v1_chr7_-_116042674_116042698	0.01189468728948604	ACAGUAU	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr1_-_167070695_167070732	0.01178763480728404	ACAGUAU	ENSMUST00000027839.14|Uck2|ENSMUSG00000026558.14|uridine-cytidine kinase 2
mm39_v1_chr2_+_70392351_70392386	0.01175171700116171	ACAGUAU	ENSMUST00000094934.11|Gad1|ENSMUSG00000070880.11|glutamate decarboxylase 1
mm39_v1_chr1_+_60448703_60448811	0.011633284460369188	ACAGUAU	ENSMUST00000052332.15|Abi2|ENSMUSG00000026782.16|abl interactor 2
mm39_v1_chr3_+_16237371_16237447	0.01113981043321186	ACAGUAU	ENSMUST00000108345.9|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000191774.6|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000108346.5|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3
mm39_v1_chr13_+_55357585_55357602	0.011008520934494639	ACAGUAU	ENSMUST00000224973.2|Nsd1|ENSMUSG00000021488.9|nuclear receptor-binding SET-domain protein 1	ENSMUST00000099490.3|Nsd1|ENSMUSG00000021488.9|nuclear receptor-binding SET-domain protein 1
mm39_v1_chr8_-_89770790_89770823	0.010906679374181365	ACAGUAU	ENSMUST00000034090.8|Sall1|ENSMUSG00000031665.8|spalt like transcription factor 1
mm39_v1_chr7_+_55699883_55700001	0.010301704978248795	ACAGUAU	ENSMUST00000205653.2|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2	ENSMUST00000076226.13|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr3_+_82933383_82933522	0.010036714545290154	ACAGUAU	ENSMUST00000029630.15|Fga|ENSMUSG00000028001.17|fibrinogen alpha chain	ENSMUST00000166581.4|Fga|ENSMUSG00000028001.17|fibrinogen alpha chain
mm39_v1_chr12_+_30934320_30934325	0.009525772651849224	ACAGUAU	ENSMUST00000067087.7|Alkal2|ENSMUSG00000054204.7|ALK and LTK ligand 2
mm39_v1_chr7_-_70010341_70010494	0.009442631584023527	ACAGUAU	ENSMUST00000032768.15|Nr2f2|ENSMUSG00000030551.15|nuclear receptor subfamily 2, group F, member 2
mm39_v1_chr19_+_48194464_48194601	0.009314997426361037	ACAGUAU	ENSMUST00000078880.6|Sorcs3|ENSMUSG00000063434.7|sortilin-related VPS10 domain containing receptor 3
mm39_v1_chr9_-_96993169_96993214	0.00917893394628701	ACAGUAU	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr4_+_108576846_108576846	0.009137113048940026	ACAGUAU	ENSMUST00000178992.2|3110021N24Rik|ENSMUSG00000094958.2|RIKEN cDNA 3110021N24 gene
mm39_v1_chr5_-_69749617_69749683	0.00889961774243805	ACAGUAU	ENSMUST00000173927.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000120789.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000031117.13|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2
mm39_v1_chr6_-_99243455_99243501	0.006993858460655011	ACAGUAU	ENSMUST00000113326.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chrX_+_99019176_99019387	0.006554684756930258	ACAGUAU	ENSMUST00000113781.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113783.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113779.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113776.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113775.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113780.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113778.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113777.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000071453.3|Eda|ENSMUSG00000059327.10|ectodysplasin-A
mm39_v1_chr9_-_30833748_30833861	0.0063859971454852315	ACAGUAU	ENSMUST00000065112.7|Adamts15|ENSMUSG00000033453.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm39_v1_chr2_+_26806372_26806410	0.0062483656427142235	ACAGUAU	ENSMUST00000015017.8|Surf2|ENSMUSG00000014873.16|surfeit gene 2
mm39_v1_chr6_+_113284098_113284390	0.006245184566033551	ACAGUAU	ENSMUST00000113122.8|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000204198.3|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000113121.8|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000113119.8|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000113117.4|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000204626.3|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1	ENSMUST00000203577.2|Brpf1|ENSMUSG00000001632.17|bromodomain and PHD finger containing, 1
mm39_v1_chr2_+_121786444_121786498	0.005855960284394919	ACAGUAU	ENSMUST00000036647.13|Ctdspl2|ENSMUSG00000033411.17|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm39_v1_chr15_-_13173736_13173791	0.005633923165756189	ACAGUAU	ENSMUST00000036439.6|Cdh6|ENSMUSG00000039385.6|cadherin 6
mm39_v1_chr11_-_88609048_88609136	0.005525212153005877	ACAGUAU	ENSMUST00000107909.8|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr16_-_60425608_60425616	0.005118026594325953	ACAGUAU	ENSMUST00000068860.13|Epha6|ENSMUSG00000055540.16|Eph receptor A6
mm39_v1_chr7_-_81584081_81584221	0.004999350517176023	ACAGUAU	ENSMUST00000026094.6|Hdgfl3|ENSMUSG00000025104.14|HDGF like 3	ENSMUST00000107305.8|Hdgfl3|ENSMUSG00000025104.14|HDGF like 3
mm39_v1_chr16_-_67417768_67417810	0.004459917264594115	ACAGUAU	ENSMUST00000114292.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2	ENSMUST00000120898.8|Cadm2|ENSMUSG00000064115.14|cell adhesion molecule 2
mm39_v1_chr6_-_21851827_21852182	0.004454176106619082	ACAGUAU	ENSMUST00000202353.2|Tspan12|ENSMUSG00000029669.15|tetraspanin 12	ENSMUST00000134635.2|Tspan12|ENSMUSG00000029669.15|tetraspanin 12	ENSMUST00000123116.8|Tspan12|ENSMUSG00000029669.15|tetraspanin 12	ENSMUST00000120965.8|Tspan12|ENSMUSG00000029669.15|tetraspanin 12	ENSMUST00000143531.2|Tspan12|ENSMUSG00000029669.15|tetraspanin 12
mm39_v1_chr2_+_138098454_138098499	0.0041400854991377415	ACAGUAU	ENSMUST00000091556.12|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr10_+_40225272_40225385	0.0037977961746574235	ACAGUAU	ENSMUST00000044672.11|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19	ENSMUST00000095743.4|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19
mm39_v1_chr1_-_46893206_46893240	0.0037505448847925523	ACAGUAU	ENSMUST00000027131.6|Slc39a10|ENSMUSG00000025986.7|solute carrier family 39 (zinc transporter), member 10
mm39_v1_chr17_-_64638887_64638951	0.0034033385279100114	ACAGUAU	ENSMUST00000172818.8|Pja2|ENSMUSG00000024083.17|praja ring finger ubiquitin ligase 2
mm39_v1_chr8_+_95113066_95113135	0.0025394045317492114	ACAGUAU	ENSMUST00000161576.8|Herpud1|ENSMUSG00000031770.17|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	ENSMUST00000034220.8|Herpud1|ENSMUSG00000031770.17|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm39_v1_chr10_-_110845860_110845927	0.002299752736210084	ACAGUAU	ENSMUST00000041723.15|Zdhhc17|ENSMUSG00000035798.15|zinc finger, DHHC domain containing 17
mm39_v1_chr6_+_97783975_97784028	0.0019250018880945896	ACAGUAU	ENSMUST00000203884.3|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000043637.14|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr10_-_95252712_95252723	0.0018509442398490822	ACAGUAU	ENSMUST00000020215.16|Socs2|ENSMUSG00000020027.19|suppressor of cytokine signaling 2
mm39_v1_chr17_-_63188139_63188352	0.001248590977040101	ACAGUAU	ENSMUST00000078839.5|Efna5|ENSMUSG00000048915.13|ephrin A5	ENSMUST00000076840.12|Efna5|ENSMUSG00000048915.13|ephrin A5
mm39_v1_chr5_-_37981919_37981933	0.001125308797588285	ACAGUAU	ENSMUST00000063116.10|Msx1|ENSMUSG00000048450.11|msh homeobox 1
mm39_v1_chr5_+_115567644_115567673	0.0011067382959258037	ACAGUAU	ENSMUST00000150779.8|Msi1|ENSMUSG00000054256.12|musashi RNA-binding protein 1
mm39_v1_chr15_-_43034205_43034227	0.0009845695365212747	ACAGUAU	ENSMUST00000063492.8|Rspo2|ENSMUSG00000051920.8|R-spondin 2	ENSMUST00000226810.2|Rspo2|ENSMUSG00000051920.8|R-spondin 2
mm39_v1_chr8_+_26648169_26648282	0.0009672538039325593	ACAGUAU	ENSMUST00000036807.13|Thap1|ENSMUSG00000037214.13|THAP domain containing, apoptosis associated protein 1	ENSMUST00000130231.2|Thap1|ENSMUSG00000037214.13|THAP domain containing, apoptosis associated protein 1
mm39_v1_chr6_+_112436466_112436565	0.000948432543238013	ACAGUAU	ENSMUST00000075477.8|Cav3|ENSMUSG00000062694.8|caveolin 3
mm39_v1_chr7_-_66077215_66077265	0.0005774978706424017	ACAGUAU	ENSMUST00000015278.15|Aldh1a3|ENSMUSG00000015134.16|aldehyde dehydrogenase family 1, subfamily A3
mm39_v1_chr18_-_58343423_58343559	0.0003508751212932417	ACAGUAU	ENSMUST00000025497.8|Fbn2|ENSMUSG00000024598.10|fibrillin 2
mm39_v1_chr16_-_97763780_97763836	0.00013592231770759032	ACAGUAU	ENSMUST00000232187.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000232165.2|C2cd2|ENSMUSG00000045975.9|C2 calcium-dependent domain containing 2	ENSMUST00000231263.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000052089.9|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000063605.15|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000113734.9|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000231560.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21
