mm39_v1_chr10_+_82821304_82821338	0.03457229203507287	ACUGCAU	ENSMUST00000040110.8|Chst11|ENSMUSG00000034612.8|carbohydrate sulfotransferase 11
mm39_v1_chr8_-_4829519_4829557	0.034353244098849545	ACUGCAU	ENSMUST00000022945.9|Shcbp1|ENSMUSG00000022322.9|Shc SH2-domain binding protein 1
mm39_v1_chr16_+_16714333_16714462	0.0337656980096963	ACUGCAU	ENSMUST00000027373.12|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)	ENSMUST00000232247.2|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)
mm39_v1_chr14_+_67953547_67953571	0.03361790736078268	ACUGCAU	ENSMUST00000078053.13|Kctd9|ENSMUSG00000034327.18|potassium channel tetramerisation domain containing 9
mm39_v1_chrX_-_135644424_135644442	0.03296471529218981	ACUGCAU	ENSMUST00000166478.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2	ENSMUST00000113097.8|Morf4l2|ENSMUSG00000031422.17|mortality factor 4 like 2
mm39_v1_chr14_-_123220554_123220695	0.0325146689819592	ACUGCAU	ENSMUST00000126867.8|Tmtc4|ENSMUSG00000041594.19|transmembrane and tetratricopeptide repeat containing 4	ENSMUST00000148661.2|Tmtc4|ENSMUSG00000041594.19|transmembrane and tetratricopeptide repeat containing 4	ENSMUST00000037726.14|Tmtc4|ENSMUSG00000041594.19|transmembrane and tetratricopeptide repeat containing 4
mm39_v1_chr8_-_117459730_117459824	0.0314068266658846	ACUGCAU	ENSMUST00000109102.4|Cdyl2|ENSMUSG00000031758.11|chromodomain protein, Y chromosome-like 2
mm39_v1_chrX_-_50106844_50106910	0.025997345168974614	ACUGCAU	ENSMUST00000053593.8|Rap2c|ENSMUSG00000050029.8|RAP2C, member of RAS oncogene family
mm39_v1_chr1_-_164285914_164285932	0.025928007666341023	ACUGCAU	ENSMUST00000027863.13|Atp1b1|ENSMUSG00000026576.13|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm39_v1_chr5_+_108213608_108213634	0.025316596663042815	ACUGCAU	ENSMUST00000081567.11|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000170319.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000112626.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2
mm39_v1_chr18_-_43610829_43610868	0.023039078248205412	ACUGCAU	ENSMUST00000057110.11|Eif3j2|ENSMUSG00000043424.11|eukaryotic translation initiation factor 3, subunit J2
mm39_v1_chr11_-_82781369_82781452	0.02125332423919268	ACUGCAU	ENSMUST00000092844.13|Rad51d|ENSMUSG00000018841.18|RAD51 paralog D	ENSMUST00000021033.16|Rad51d|ENSMUSG00000018841.18|RAD51 paralog D	ENSMUST00000018985.15|Rad51d|ENSMUSG00000018841.18|RAD51 paralog D
mm39_v1_chr9_+_119170486_119170581	0.02038707310498878	ACUGCAU	ENSMUST00000175743.8|Acaa1a|ENSMUSG00000036138.17|acetyl-Coenzyme A acyltransferase 1A	ENSMUST00000176397.8|Acaa1a|ENSMUSG00000036138.17|acetyl-Coenzyme A acyltransferase 1A
mm39_v1_chr10_-_117681864_117681940	0.020367260386065806	ACUGCAU	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr15_-_96597610_96597617	0.019069397276965376	ACUGCAU	ENSMUST00000023099.8|Slc38a2|ENSMUSG00000022462.8|solute carrier family 38, member 2
mm39_v1_chr13_-_99027544_99027571	0.01900779396244471	ACUGCAU	ENSMUST00000109399.9|Tnpo1|ENSMUSG00000009470.18|transportin 1
mm39_v1_chr13_+_55740948_55740990	0.018994464511092463	ACUGCAU	ENSMUST00000109905.5|Tmed9|ENSMUSG00000058569.9|transmembrane p24 trafficking protein 9
mm39_v1_chr10_+_4561974_4562075	0.01878677870415003	ACUGCAU	ENSMUST00000105590.8|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)	ENSMUST00000067086.14|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)
mm39_v1_chr6_-_148847854_148847995	0.018393560183400944	ACUGCAU	ENSMUST00000139355.8|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000146457.2|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000054080.15|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor
mm39_v1_chr16_-_31821938_31822105	0.01805718211570131	ACUGCAU	ENSMUST00000023457.13|Senp5|ENSMUSG00000022772.13|SUMO/sentrin specific peptidase 5	ENSMUST00000231360.2|Senp5|ENSMUSG00000022772.13|SUMO/sentrin specific peptidase 5
mm39_v1_chr2_-_181007099_181007197	0.017962787845865552	ACUGCAU	ENSMUST00000108808.8|Arfrp1|ENSMUSG00000038671.16|ADP-ribosylation factor related protein 1	ENSMUST00000170190.8|Arfrp1|ENSMUSG00000038671.16|ADP-ribosylation factor related protein 1	ENSMUST00000127988.8|Arfrp1|ENSMUSG00000038671.16|ADP-ribosylation factor related protein 1
mm39_v1_chr19_-_41252370_41252447	0.017446806266333822	ACUGCAU	ENSMUST00000237871.2|Tm9sf3|ENSMUSG00000025016.12|transmembrane 9 superfamily member 3	ENSMUST00000025989.10|Tm9sf3|ENSMUSG00000025016.12|transmembrane 9 superfamily member 3
mm39_v1_chr8_-_105169621_105169679	0.017022440851082416	ACUGCAU	ENSMUST00000041769.8|Dync1li2|ENSMUSG00000035770.9|dynein, cytoplasmic 1 light intermediate chain 2
mm39_v1_chr6_-_92191878_92191906	0.016705002247401617	ACUGCAU	ENSMUST00000014694.11|Rbsn|ENSMUSG00000014550.15|rabenosyn, RAB effector
mm39_v1_chr2_+_121859025_121859137	0.016627636793522894	ACUGCAU	ENSMUST00000028668.8|Eif3j1|ENSMUSG00000027236.9|eukaryotic translation initiation factor 3, subunit J1
mm39_v1_chr1_-_37580084_37580128	0.015334008838156664	ACUGCAU	ENSMUST00000151952.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr2_+_12928852_12928924	0.015118378132054432	ACUGCAU	ENSMUST00000154269.7|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000114796.9|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000134794.8|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000028063.7|Pter|ENSMUSG00000026730.13|phosphotriesterase related
mm39_v1_chr5_-_92231314_92231416	0.013586270341108451	ACUGCAU	ENSMUST00000169094.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2	ENSMUST00000167918.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2
mm39_v1_chr6_-_47571901_47571981	0.01324077439381627	ACUGCAU	ENSMUST00000081721.13|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114618.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114616.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit
mm39_v1_chr4_+_40722911_40723001	0.01257281033384228	ACUGCAU	ENSMUST00000164233.8|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1	ENSMUST00000137246.8|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1	ENSMUST00000125442.8|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1
mm39_v1_chr11_+_80099843_80099884	0.011813586144019252	ACUGCAU	ENSMUST00000077451.14|Rhot1|ENSMUSG00000017686.18|ras homolog family member T1	ENSMUST00000055056.16|Rhot1|ENSMUSG00000017686.18|ras homolog family member T1
mm39_v1_chr3_+_63883527_63883556	0.011728863585251782	ACUGCAU	ENSMUST00000029405.8|Gmps|ENSMUSG00000027823.10|guanine monophosphate synthetase
mm39_v1_chr5_-_24235646_24235705	0.011488705875102924	ACUGCAU	ENSMUST00000197617.5|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A	ENSMUST00000030849.13|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A
mm39_v1_chr4_-_132570421_132570495	0.011416673722641097	ACUGCAU	ENSMUST00000105919.2|Ppp1r8|ENSMUSG00000028882.14|protein phosphatase 1, regulatory subunit 8	ENSMUST00000030702.14|Ppp1r8|ENSMUSG00000028882.14|protein phosphatase 1, regulatory subunit 8
mm39_v1_chr18_-_35087355_35087413	0.01129934170383761	ACUGCAU	ENSMUST00000025217.11|Hspa9|ENSMUSG00000024359.11|heat shock protein 9
mm39_v1_chr11_-_6425877_6425917	0.01086246926953587	ACUGCAU	ENSMUST00000179343.3|Purb|ENSMUSG00000094483.3|purine rich element binding protein B
mm39_v1_chr19_+_18648088_18648213	0.01085162346913602	ACUGCAU	ENSMUST00000025632.11|Carnmt1|ENSMUSG00000024726.11|carnosine N-methyltransferase 1
mm39_v1_chr7_-_90106375_90106437	0.010770243249798195	ACUGCAU	ENSMUST00000032844.7|Tmem126a|ENSMUSG00000030615.13|transmembrane protein 126A
mm39_v1_chr14_-_98406977_98407031	0.010482417150752555	ACUGCAU	ENSMUST00000071533.13|Dach1|ENSMUSG00000055639.17|dachshund family transcription factor 1	ENSMUST00000069334.8|Dach1|ENSMUSG00000055639.17|dachshund family transcription factor 1
mm39_v1_chr3_-_138780937_138781008	0.0104478461157943	ACUGCAU	ENSMUST00000098574.9|Rap1gds1|ENSMUSG00000028149.13|RAP1, GTP-GDP dissociation stimulator 1
mm39_v1_chr7_+_65759198_65759263	0.010270808273324692	ACUGCAU	ENSMUST00000036372.8|Chsy1|ENSMUSG00000032640.11|chondroitin sulfate synthase 1
mm39_v1_chr11_+_32592707_32592875	0.009454002355090344	ACUGCAU	ENSMUST00000109366.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000093205.13|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11	ENSMUST00000076383.8|Fbxw11|ENSMUSG00000020271.18|F-box and WD-40 domain protein 11
mm39_v1_chr14_-_47059694_47059743	0.008967819520648025	ACUGCAU	ENSMUST00000111817.8|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta	ENSMUST00000079314.12|Gmfb|ENSMUSG00000062014.14|glia maturation factor, beta
mm39_v1_chr5_+_32616187_32616312	0.008494692168360634	ACUGCAU	ENSMUST00000015100.15|Ppp1cb|ENSMUSG00000014956.16|protein phosphatase 1 catalytic subunit beta
mm39_v1_chr1_+_59521583_59521583	0.008490988222510876	ACUGCAU	ENSMUST00000114246.4|Fzd7|ENSMUSG00000041075.9|frizzled class receptor 7
mm39_v1_chr1_+_82817170_82817239	0.008475994437829922	ACUGCAU	ENSMUST00000189220.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000113444.8|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr1_-_52539395_52539459	0.008192654039166115	ACUGCAU	ENSMUST00000186764.7|Nab1|ENSMUSG00000002881.15|Ngfi-A binding protein 1
mm39_v1_chr18_-_10610048_10610146	0.008116971610914256	ACUGCAU	ENSMUST00000115864.8|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1	ENSMUST00000145320.2|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1	ENSMUST00000097670.10|Esco1|ENSMUSG00000024293.17|establishment of sister chromatid cohesion N-acetyltransferase 1
mm39_v1_chr1_-_16727067_16727121	0.00775263824331379	ACUGCAU	ENSMUST00000188641.7|Eloc|ENSMUSG00000079658.10|elongin C
mm39_v1_chr12_-_91815855_91815931	0.00744187149574713	ACUGCAU	ENSMUST00000167466.2|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)	ENSMUST00000021347.12|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)	ENSMUST00000178462.8|Sel1l|ENSMUSG00000020964.15|sel-1 suppressor of lin-12-like (C. elegans)
mm39_v1_chr9_-_72019109_72019191	0.007298096182794028	ACUGCAU	ENSMUST00000183404.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12	ENSMUST00000184783.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chr7_+_120276801_120276868	0.007228673556084101	ACUGCAU	ENSMUST00000208454.2|Mosmo|ENSMUSG00000046096.8|modulator of smoothened	ENSMUST00000060175.8|Mosmo|ENSMUSG00000046096.8|modulator of smoothened
mm39_v1_chrX_+_55655111_55655177	0.007162644226782557	ACUGCAU	ENSMUST00000144068.8|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6	ENSMUST00000077741.12|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6	ENSMUST00000114784.4|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm39_v1_chr15_-_36794741_36794791	0.0070132772847411535	ACUGCAU	ENSMUST00000110361.8|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000022894.14|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000110359.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr2_-_23462052_23462124	0.006898455360521302	ACUGCAU	ENSMUST00000132484.7|Spopl|ENSMUSG00000026771.15|speckle-type BTB/POZ protein-like
mm39_v1_chr13_+_3588063_3588150	0.006515232843420027	ACUGCAU	ENSMUST00000223396.2|Gdi2|ENSMUSG00000021218.11|guanosine diphosphate (GDP) dissociation inhibitor 2	ENSMUST00000059515.8|Gdi2|ENSMUSG00000021218.11|guanosine diphosphate (GDP) dissociation inhibitor 2	ENSMUST00000222365.2|Gdi2|ENSMUSG00000021218.11|guanosine diphosphate (GDP) dissociation inhibitor 2
mm39_v1_chr18_+_44513547_44513644	0.00624072484986979	ACUGCAU	ENSMUST00000202306.2|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2	ENSMUST00000025350.10|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2
mm39_v1_chr6_-_131365380_131365451	0.006086632839300612	ACUGCAU	ENSMUST00000032309.13|Ybx3|ENSMUSG00000030189.16|Y box protein 3	ENSMUST00000087865.4|Ybx3|ENSMUSG00000030189.16|Y box protein 3
mm39_v1_chr11_+_52287239_52287300	0.005930665421044234	ACUGCAU	ENSMUST00000036952.5|9530068E07Rik|ENSMUSG00000036275.14|RIKEN cDNA 9530068E07 gene	ENSMUST00000109057.8|9530068E07Rik|ENSMUSG00000036275.14|RIKEN cDNA 9530068E07 gene
mm39_v1_chr16_+_37360245_37360281	0.005437911347374496	ACUGCAU	ENSMUST00000023524.13|Rabl3|ENSMUSG00000022827.15|RAB, member RAS oncogene family-like 3
mm39_v1_chr11_-_85125889_85125963	0.005181291204742626	ACUGCAU	ENSMUST00000018625.10|Appbp2|ENSMUSG00000018481.10|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm39_v1_chr13_+_111822712_111822745	0.005110985687724593	ACUGCAU	ENSMUST00000109272.9|Mier3|ENSMUSG00000032727.15|MIER family member 3
mm39_v1_chr3_+_54600509_54600526	0.00423936599245382	ACUGCAU	ENSMUST00000170552.6|Supt20|ENSMUSG00000027751.14|SPT20 SAGA complex component
mm39_v1_chr3_-_94490023_94490077	0.004080851159999912	ACUGCAU	ENSMUST00000029783.16|Snx27|ENSMUSG00000028136.16|sorting nexin family member 27
mm39_v1_chr3_-_84489783_84489841	0.003924460204757137	ACUGCAU	ENSMUST00000107687.9|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1	ENSMUST00000098990.10|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1
mm39_v1_chr16_-_84532630_84532683	0.003676905041755181	ACUGCAU	ENSMUST00000116584.2|Mrpl39|ENSMUSG00000022889.8|mitochondrial ribosomal protein L39
mm39_v1_chr3_-_69034425_69034446	0.0034347184559863713	ACUGCAU	ENSMUST00000194558.6|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4	ENSMUST00000029353.9|Kpna4|ENSMUSG00000027782.11|karyopherin (importin) alpha 4
mm39_v1_chr9_-_65815958_65816098	0.003425641307138222	ACUGCAU	ENSMUST00000119245.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4	ENSMUST00000134338.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4	ENSMUST00000179395.8|Trip4|ENSMUSG00000032386.16|thyroid hormone receptor interactor 4
mm39_v1_chr1_-_16589511_16589560	0.0033847633342441457	ACUGCAU	ENSMUST00000162751.8|Stau2|ENSMUSG00000025920.20|staufen double-stranded RNA binding protein 2	ENSMUST00000027052.13|Stau2|ENSMUSG00000025920.20|staufen double-stranded RNA binding protein 2	ENSMUST00000149320.9|Stau2|ENSMUSG00000025920.20|staufen double-stranded RNA binding protein 2
mm39_v1_chr11_+_105183463_105183495	0.003315678714299117	ACUGCAU	ENSMUST00000100335.10|Mrc2|ENSMUSG00000020695.15|mannose receptor, C type 2	ENSMUST00000021038.5|Mrc2|ENSMUSG00000020695.15|mannose receptor, C type 2
mm39_v1_chr18_-_46658957_46659078	0.0031400525778633994	ACUGCAU	ENSMUST00000036226.6|Fem1c|ENSMUSG00000033319.6|fem 1 homolog c
mm39_v1_chr2_-_120439764_120439798	0.0030832175681482672	ACUGCAU	ENSMUST00000102496.8|Lrrc57|ENSMUSG00000027286.17|leucine rich repeat containing 57
mm39_v1_chr3_-_41037427_41037481	0.003039272350226971	ACUGCAU	ENSMUST00000058578.8|Pgrmc2|ENSMUSG00000049940.8|progesterone receptor membrane component 2
mm39_v1_chr1_-_189902868_189902942	0.0025612874520231166	ACUGCAU	ENSMUST00000177288.4|Prox1|ENSMUSG00000010175.14|prospero homeobox 1	ENSMUST00000175916.8|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr6_+_34686373_34686381	0.002520543983316957	ACUGCAU	ENSMUST00000115021.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr10_-_123032821_123032868	0.0022968744382555256	ACUGCAU	ENSMUST00000219619.2|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15	ENSMUST00000020334.9|Usp15|ENSMUSG00000020124.11|ubiquitin specific peptidase 15
mm39_v1_chr9_-_107109108_107109117	0.002070281054092433	ACUGCAU	ENSMUST00000044532.11|Dock3|ENSMUSG00000039716.13|dedicator of cyto-kinesis 3
mm39_v1_chr5_+_13449276_13449350	0.0019268035461370806	ACUGCAU	ENSMUST00000030714.9|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	ENSMUST00000141968.2|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr8_-_80784619_80784646	0.0018218824999297468	ACUGCAU	ENSMUST00000079038.4|Hhip|ENSMUSG00000064325.5|Hedgehog-interacting protein
mm39_v1_chr1_-_138547403_138547497	0.001545031572146455	ACUGCAU	ENSMUST00000027642.5|Nek7|ENSMUSG00000026393.11|NIMA (never in mitosis gene a)-related expressed kinase 7	ENSMUST00000186017.7|Nek7|ENSMUSG00000026393.11|NIMA (never in mitosis gene a)-related expressed kinase 7
mm39_v1_chr11_+_83741657_83741681	0.0014023771846331356	ACUGCAU	ENSMUST00000021016.10|Hnf1b|ENSMUSG00000020679.12|HNF1 homeobox B
mm39_v1_chr14_-_80008745_80008758	0.0013706764195027478	ACUGCAU	ENSMUST00000039568.11|Pcdh8|ENSMUSG00000036422.11|protocadherin 8	ENSMUST00000195355.2|Pcdh8|ENSMUSG00000036422.11|protocadherin 8
mm39_v1_chr2_+_65451100_65451170	0.0013251607996879115	ACUGCAU	ENSMUST00000144254.6|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha	ENSMUST00000028377.14|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha
mm39_v1_chr1_+_187730018_187730031	0.0013040867373502723	ACUGCAU	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr14_+_31881822_31881950	0.0012584276090728994	ACUGCAU	ENSMUST00000163336.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4	ENSMUST00000169722.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4	ENSMUST00000168385.8|Ncoa4|ENSMUSG00000056234.16|nuclear receptor coactivator 4
mm39_v1_chr19_-_47452840_47452894	0.001098307892064101	ACUGCAU	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr5_-_148489457_148489498	0.001069173128547456	ACUGCAU	ENSMUST00000079324.14|Ubl3|ENSMUSG00000001687.16|ubiquitin-like 3
mm39_v1_chr16_-_97763780_97763836	0.0009984275313268552	ACUGCAU	ENSMUST00000232187.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000232165.2|C2cd2|ENSMUSG00000045975.9|C2 calcium-dependent domain containing 2	ENSMUST00000231263.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000052089.9|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000063605.15|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000113734.9|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21	ENSMUST00000231560.2|Zbtb21|ENSMUSG00000046962.17|zinc finger and BTB domain containing 21
mm39_v1_chr1_-_128345089_128345121	0.0009761807364885838	ACUGCAU	ENSMUST00000027602.15|Dars|ENSMUSG00000026356.16|aspartyl-tRNA synthetase	ENSMUST00000064309.9|Dars|ENSMUSG00000026356.16|aspartyl-tRNA synthetase
mm39_v1_chr19_-_21449916_21450036	0.0008224636010403418	ACUGCAU	ENSMUST00000087600.10|Gda|ENSMUSG00000058624.14|guanine deaminase
mm39_v1_chr8_+_55407872_55407889	0.000797385952803701	ACUGCAU	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr10_+_102376109_102376142	0.0007313823248419166	ACUGCAU	ENSMUST00000055355.6|Rassf9|ENSMUSG00000044921.6|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
mm39_v1_chr4_-_91260265_91260306	0.0005507449400899957	ACUGCAU	ENSMUST00000107110.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000008633.15|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000107118.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr15_+_11000802_11000823	0.00033937219165836984	ACUGCAU	ENSMUST00000117100.4|Slc45a2|ENSMUSG00000022243.11|solute carrier family 45, member 2
mm39_v1_chr2_+_132688558_132688628	0.0002748604265263533	ACUGCAU	ENSMUST00000028835.13|Crls1|ENSMUSG00000027357.17|cardiolipin synthase 1	ENSMUST00000110122.10|Crls1|ENSMUSG00000027357.17|cardiolipin synthase 1
mm39_v1_chr7_-_105393519_105393568	0.00023480573400289567	ACUGCAU	ENSMUST00000141116.2|Taf10|ENSMUSG00000043866.12|TATA-box binding protein associated factor 10
mm39_v1_chrX_+_111513971_111513971	0.00023373970280174365	ACUGCAU	ENSMUST00000071814.13|Zfp711|ENSMUSG00000025529.15|zinc finger protein 711
mm39_v1_chr16_-_57575070_57575100	9.420404302348916e-05	ACUGCAU	ENSMUST00000089332.5|Col8a1|ENSMUSG00000068196.6|collagen, type VIII, alpha 1
mm39_v1_chr11_-_50732373_50732379	1.4138252959820194e-05	ACUGCAU	ENSMUST00000109133.2|Zfp879|ENSMUSG00000044296.11|zinc finger protein 879	ENSMUST00000109134.8|Zfp879|ENSMUSG00000044296.11|zinc finger protein 879	ENSMUST00000049625.2|Zfp879|ENSMUSG00000044296.11|zinc finger protein 879
mm39_v1_chr10_-_121883196_121883227	1.3880400400634202e-05	ACUGCAU	ENSMUST00000020322.12|Srgap1|ENSMUSG00000020121.16|SLIT-ROBO Rho GTPase activating protein 1	ENSMUST00000081688.13|Srgap1|ENSMUSG00000020121.16|SLIT-ROBO Rho GTPase activating protein 1
