mm39_v1_chr11_+_34264757_34264822	0.8139746067794142	AGUGCAA	ENSMUST00000165963.9|Insyn2b|ENSMUSG00000069911.12|inhibitory synaptic factor family member 2B	ENSMUST00000093192.4|Insyn2b|ENSMUSG00000069911.12|inhibitory synaptic factor family member 2B
mm39_v1_chr17_-_32074754_32074780	0.7965828613972993	AGUGCAA	ENSMUST00000024839.6|Sik1|ENSMUSG00000024042.8|salt inducible kinase 1
mm39_v1_chr3_-_152045986_152046055	0.7783618765726975	AGUGCAA	ENSMUST00000199397.2|Miga1|ENSMUSG00000054942.14|mitoguardin 1	ENSMUST00000199334.5|Miga1|ENSMUSG00000054942.14|mitoguardin 1	ENSMUST00000068243.11|Miga1|ENSMUSG00000054942.14|mitoguardin 1	ENSMUST00000073089.13|Miga1|ENSMUSG00000054942.14|mitoguardin 1
mm39_v1_chr4_-_141265745_141265838	0.759336276771121	AGUGCAA	ENSMUST00000078886.10|Spen|ENSMUSG00000040761.17|spen family transcription repressor
mm39_v1_chr14_-_67106037_67106137	0.7066219735520665	AGUGCAA	ENSMUST00000022629.9|Dpysl2|ENSMUSG00000022048.9|dihydropyrimidinase-like 2
mm39_v1_chr8_+_40964818_40964829	0.6618780423531642	AGUGCAA	ENSMUST00000098817.4|Vps37a|ENSMUSG00000031600.12|vacuolar protein sorting 37A
mm39_v1_chr1_+_118555668_118555686	0.5659098414791509	AGUGCAA	ENSMUST00000027629.10|Tfcp2l1|ENSMUSG00000026380.11|transcription factor CP2-like 1
mm39_v1_chrX_+_102400061_102400094	0.5658070414116394	AGUGCAA	ENSMUST00000116547.3|Chic1|ENSMUSG00000031327.11|cysteine-rich hydrophobic domain 1
mm39_v1_chr12_-_72455708_72455828	0.5466815648822857	AGUGCAA	ENSMUST00000078505.14|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr4_-_35157405_35157504	0.5397071124422043	AGUGCAA	ENSMUST00000102975.10|Mob3b|ENSMUSG00000073910.11|MOB kinase activator 3B
mm39_v1_chr2_+_71811526_71811631	0.5259558569232486	AGUGCAA	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr9_+_53448322_53448374	0.5147708732751837	AGUGCAA	ENSMUST00000035850.8|Npat|ENSMUSG00000033054.8|nuclear protein in the AT region
mm39_v1_chr8_-_116434517_116434533	0.5101623414813126	AGUGCAA	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr1_+_59802543_59802559	0.4899914486340333	AGUGCAA	ENSMUST00000087435.7|Bmpr2|ENSMUSG00000067336.7|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm39_v1_chr5_-_62923463_62923615	0.47978133953197144	AGUGCAA	ENSMUST00000076623.8|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	ENSMUST00000159470.3|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm39_v1_chr11_-_102446947_102447025	0.4606697943685159	AGUGCAA	ENSMUST00000143842.2|Gpatch8|ENSMUSG00000034621.15|G patch domain containing 8
mm39_v1_chr4_-_108637979_108638000	0.44920933524165946	AGUGCAA	ENSMUST00000106657.8|Zfyve9|ENSMUSG00000034557.15|zinc finger, FYVE domain containing 9
mm39_v1_chr9_+_109760528_109760554	0.44859671334747325	AGUGCAA	ENSMUST00000035055.15|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr7_-_63588610_63588704	0.44492398236223835	AGUGCAA	ENSMUST00000063694.10|Klf13|ENSMUSG00000052040.11|Kruppel-like factor 13
mm39_v1_chr11_-_50183129_50183191	0.4188024471839237	AGUGCAA	ENSMUST00000059458.5|Maml1|ENSMUSG00000050567.17|mastermind like transcriptional coactivator 1
mm39_v1_chr10_-_71121083_71121094	0.418231348232121	AGUGCAA	ENSMUST00000020085.7|Ube2d1|ENSMUSG00000019927.7|ubiquitin-conjugating enzyme E2D 1
mm39_v1_chr1_-_39517761_39517841	0.416198615476012	AGUGCAA	ENSMUST00000193823.2|Tbc1d8|ENSMUSG00000003134.11|TBC1 domain family, member 8	ENSMUST00000054462.11|Tbc1d8|ENSMUSG00000003134.11|TBC1 domain family, member 8
mm39_v1_chr19_-_31742427_31742480	0.40959505325786855	AGUGCAA	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr2_-_38177359_38177406	0.40709536677388486	AGUGCAA	ENSMUST00000102787.10|Dennd1a|ENSMUSG00000035392.18|DENN/MADD domain containing 1A
mm39_v1_chr16_+_51851588_51851705	0.40617443989678337	AGUGCAA	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr11_+_69656725_69656752	0.37276619794444943	AGUGCAA	ENSMUST00000108640.8|Zbtb4|ENSMUSG00000018750.15|zinc finger and BTB domain containing 4	ENSMUST00000108639.8|Zbtb4|ENSMUSG00000018750.15|zinc finger and BTB domain containing 4
mm39_v1_chr5_-_25703700_25703841	0.36788779735882315	AGUGCAA	ENSMUST00000173073.8|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000045291.14|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000173174.2|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C
mm39_v1_chr3_-_107240989_107240989	0.36182168641307844	AGUGCAA	ENSMUST00000061772.11|Rbm15|ENSMUSG00000048109.11|RNA binding motif protein 15
mm39_v1_chr11_-_103158190_103158298	0.3616877950634007	AGUGCAA	ENSMUST00000021324.3|Map3k14|ENSMUSG00000020941.8|mitogen-activated protein kinase kinase kinase 14
mm39_v1_chr17_-_66384017_66384086	0.35996571434885455	AGUGCAA	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr16_-_17540685_17540800	0.3547100955187682	AGUGCAA	ENSMUST00000232163.2|Med15|ENSMUSG00000012114.18|mediator complex subunit 15	ENSMUST00000232202.2|Med15|ENSMUSG00000012114.18|mediator complex subunit 15	ENSMUST00000080936.14|Med15|ENSMUSG00000012114.18|mediator complex subunit 15	ENSMUST00000232645.2|Med15|ENSMUSG00000012114.18|mediator complex subunit 15	ENSMUST00000232431.2|Med15|ENSMUSG00000012114.18|mediator complex subunit 15
mm39_v1_chr5_+_147367237_147367355	0.3547010885768468	AGUGCAA	ENSMUST00000176600.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr5_+_32293145_32293201	0.3499264362891189	AGUGCAA	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr10_+_56253418_56253434	0.32822279472588556	AGUGCAA	ENSMUST00000068581.9|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1	ENSMUST00000217789.2|Gja1|ENSMUSG00000050953.11|gap junction protein, alpha 1
mm39_v1_chr5_-_33011530_33011600	0.32646351518099237	AGUGCAA	ENSMUST00000130134.3|Prr14l|ENSMUSG00000054280.15|proline rich 14-like	ENSMUST00000120129.9|Prr14l|ENSMUSG00000054280.15|proline rich 14-like
mm39_v1_chr12_-_81827893_81827949	0.3156446677438505	AGUGCAA	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr11_+_117545618_117545655	0.3139351376916858	AGUGCAA	ENSMUST00000106344.8|Tnrc6c|ENSMUSG00000025571.14|trinucleotide repeat containing 6C
mm39_v1_chr6_+_86826470_86826577	0.30970215738830215	AGUGCAA	ENSMUST00000089519.13|Aak1|ENSMUSG00000057230.15|AP2 associated kinase 1	ENSMUST00000204414.3|Aak1|ENSMUSG00000057230.15|AP2 associated kinase 1
mm39_v1_chr9_-_43017249_43017322	0.30830538633572396	AGUGCAA	ENSMUST00000165665.9|Arhgef12|ENSMUSG00000059495.15|Rho guanine nucleotide exchange factor (GEF) 12
mm39_v1_chr4_+_32982981_32983155	0.3075568819714728	AGUGCAA	ENSMUST00000098190.10|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D	ENSMUST00000029946.14|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D
mm39_v1_chr2_-_167191087_167191150	0.30447295007291786	AGUGCAA	ENSMUST00000109221.9|B4galt5|ENSMUSG00000017929.14|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm39_v1_chr17_+_74835290_74835369	0.3026822299489078	AGUGCAA	ENSMUST00000180037.8|Birc6|ENSMUSG00000024073.17|baculoviral IAP repeat-containing 6
mm39_v1_chr16_+_32882882_32882919	0.29777681454342814	AGUGCAA	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chr13_+_31809774_31809799	0.2952494906556814	AGUGCAA	ENSMUST00000042054.3|Foxf2|ENSMUSG00000038402.3|forkhead box F2
mm39_v1_chr5_+_64960705_64960731	0.2944552695754426	AGUGCAA	ENSMUST00000165536.8|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr14_-_78774201_78774292	0.29291303551509534	AGUGCAA	ENSMUST00000123853.9|Akap11|ENSMUSG00000022016.18|A kinase (PRKA) anchor protein 11
mm39_v1_chr1_-_30912662_30912738	0.29151307036525276	AGUGCAA	ENSMUST00000186733.7|Phf3|ENSMUSG00000048874.16|PHD finger protein 3
mm39_v1_chr13_+_42205491_42205548	0.2857774241134319	AGUGCAA	ENSMUST00000060148.6|Hivep1|ENSMUSG00000021366.9|human immunodeficiency virus type I enhancer binding protein 1
mm39_v1_chr4_+_102971581_102971592	0.2815093606511435	AGUGCAA	ENSMUST00000106858.8|Mier1|ENSMUSG00000028522.17|MEIR1 treanscription regulator
mm39_v1_chr10_+_115220826_115220927	0.2806360892751018	AGUGCAA	ENSMUST00000036044.9|Zfc3h1|ENSMUSG00000034163.11|zinc finger, C3H1-type containing
mm39_v1_chr1_-_52766615_52766632	0.2723683198964318	AGUGCAA	ENSMUST00000156876.8|Mfsd6|ENSMUSG00000041439.16|major facilitator superfamily domain containing 6	ENSMUST00000087701.4|Mfsd6|ENSMUSG00000041439.16|major facilitator superfamily domain containing 6
mm39_v1_chr3_-_89294430_89294496	0.26608943354069137	AGUGCAA	ENSMUST00000107433.8|Zbtb7b|ENSMUSG00000028042.16|zinc finger and BTB domain containing 7B
mm39_v1_chr3_+_107008867_107008883	0.2638887322132382	AGUGCAA	ENSMUST00000038695.6|Kcna2|ENSMUSG00000040724.6|potassium voltage-gated channel, shaker-related subfamily, member 2
mm39_v1_chr8_-_17585263_17585335	0.26317207175726676	AGUGCAA	ENSMUST00000082104.7|Csmd1|ENSMUSG00000060924.16|CUB and Sushi multiple domains 1
mm39_v1_chr6_-_24664959_24665039	0.26194884530642	AGUGCAA	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr18_-_35348049_35348092	0.2566390741345522	AGUGCAA	ENSMUST00000091636.5|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2	ENSMUST00000236680.2|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2
mm39_v1_chr3_+_101917455_101917487	0.25409223591667784	AGUGCAA	ENSMUST00000066187.6|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2	ENSMUST00000198675.2|Nhlh2|ENSMUSG00000048540.9|nescient helix loop helix 2
mm39_v1_chr3_-_119576911_119577037	0.25386677170007044	AGUGCAA	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr14_-_75185281_75185324	0.25344397921074746	AGUGCAA	ENSMUST00000088970.7|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1	ENSMUST00000228252.2|Lrch1|ENSMUSG00000068015.9|leucine-rich repeats and calponin homology (CH) domain containing 1
mm39_v1_chr9_-_99022107_99022186	0.2523309503122386	AGUGCAA	ENSMUST00000035037.14|Pik3cb|ENSMUSG00000032462.15|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
mm39_v1_chr15_+_25622611_25622644	0.2501027413229597	AGUGCAA	ENSMUST00000110457.8|Myo10|ENSMUSG00000022272.18|myosin X	ENSMUST00000137601.8|Myo10|ENSMUSG00000022272.18|myosin X
mm39_v1_chr2_-_45003270_45003296	0.2468890827726384	AGUGCAA	ENSMUST00000202935.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000068415.11|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000127520.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr5_-_138153956_138154006	0.2435812752710451	AGUGCAA	ENSMUST00000132318.2|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113	ENSMUST00000049393.15|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113
mm39_v1_chr15_-_50753061_50753118	0.24113557453517906	AGUGCAA	ENSMUST00000165201.9|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1	ENSMUST00000184458.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr15_+_80595486_80595541	0.23415242657014051	AGUGCAA	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr11_-_118246332_118246332	0.23241117742392509	AGUGCAA	ENSMUST00000017610.10|Timp2|ENSMUSG00000017466.10|tissue inhibitor of metalloproteinase 2
mm39_v1_chr4_-_22488296_22488366	0.22649592123932674	AGUGCAA	ENSMUST00000178174.3|Pou3f2|ENSMUSG00000095139.3|POU domain, class 3, transcription factor 2
mm39_v1_chr4_+_134847949_134847973	0.2252129563500644	AGUGCAA	ENSMUST00000056977.14|Runx3|ENSMUSG00000070691.11|runt related transcription factor 3
mm39_v1_chr1_+_39940043_39940123	0.22518888570842494	AGUGCAA	ENSMUST00000168431.7|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000163854.9|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4
mm39_v1_chr19_+_44919585_44919613	0.22270241090131698	AGUGCAA	ENSMUST00000096053.5|Slf2|ENSMUSG00000036097.9|SMC5-SMC6 complex localization factor 2
mm39_v1_chr6_-_120015608_120015660	0.22247400806784398	AGUGCAA	ENSMUST00000177761.8|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1	ENSMUST00000088644.13|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1	ENSMUST00000060043.13|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr10_+_110581293_110581433	0.22075828067762504	AGUGCAA	ENSMUST00000174857.8|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7	ENSMUST00000073781.12|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7	ENSMUST00000173471.8|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7	ENSMUST00000173634.2|E2f7|ENSMUSG00000020185.17|E2F transcription factor 7
mm39_v1_chr6_-_83418656_83418666	0.21961411583285648	AGUGCAA	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr8_+_46924074_46924146	0.21938927455922413	AGUGCAA	ENSMUST00000034046.13|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1	ENSMUST00000211644.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr6_+_108190050_108190065	0.21814884982942181	AGUGCAA	ENSMUST00000032192.9|Itpr1|ENSMUSG00000030102.12|inositol 1,4,5-trisphosphate receptor 1
mm39_v1_chr2_-_63928339_63928367	0.21753605571057016	AGUGCAA	ENSMUST00000131615.9|Fign|ENSMUSG00000075324.14|fidgetin
mm39_v1_chr1_-_156767123_156767186	0.21666829698622478	AGUGCAA	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr19_-_46315543_46315595	0.21665983728582996	AGUGCAA	ENSMUST00000223917.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000224447.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000041391.5|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000096029.12|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing
mm39_v1_chr7_-_132415528_132415635	0.21559209382663994	AGUGCAA	ENSMUST00000097998.9|Fam53b|ENSMUSG00000030956.16|family with sequence similarity 53, member B
mm39_v1_chr10_-_8761777_8761821	0.21332732608320998	AGUGCAA	ENSMUST00000015449.6|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr4_-_53159885_53159900	0.21079711994920253	AGUGCAA	ENSMUST00000030010.4|Abca1|ENSMUSG00000015243.5|ATP-binding cassette, sub-family A (ABC1), member 1
mm39_v1_chr17_-_17845293_17845329	0.20885530982348982	AGUGCAA	ENSMUST00000041047.4|Lnpep|ENSMUSG00000023845.8|leucyl/cystinyl aminopeptidase
mm39_v1_chrX_-_135769285_135769504	0.2084033888619524	AGUGCAA	ENSMUST00000058814.7|Rab9b|ENSMUSG00000043463.7|RAB9B, member RAS oncogene family
mm39_v1_chr5_-_102217770_102217807	0.20644262254025988	AGUGCAA	ENSMUST00000053177.14|Wdfy3|ENSMUSG00000043940.16|WD repeat and FYVE domain containing 3	ENSMUST00000174698.2|Wdfy3|ENSMUSG00000043940.16|WD repeat and FYVE domain containing 3
mm39_v1_chr4_+_152181155_152181176	0.20481047530638952	AGUGCAA	ENSMUST00000105661.10|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	ENSMUST00000084115.4|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm39_v1_chr2_+_136555364_136555412	0.20405565470820067	AGUGCAA	ENSMUST00000028727.11|Snap25|ENSMUSG00000027273.14|synaptosomal-associated protein 25	ENSMUST00000110098.4|Snap25|ENSMUSG00000027273.14|synaptosomal-associated protein 25
mm39_v1_chr11_+_31822211_31822263	0.20287069153984855	AGUGCAA	ENSMUST00000020543.13|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4	ENSMUST00000109412.9|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr12_-_44257109_44257173	0.2001652423360466	AGUGCAA	ENSMUST00000015049.5|Dnajb9|ENSMUSG00000014905.5|DnaJ heat shock protein family (Hsp40) member B9
mm39_v1_chr1_+_176642226_176642226	0.1998896138575984	AGUGCAA	ENSMUST00000056773.15|Sdccag8|ENSMUSG00000026504.18|serologically defined colon cancer antigen 8	ENSMUST00000027785.15|Sdccag8|ENSMUSG00000026504.18|serologically defined colon cancer antigen 8
mm39_v1_chr18_-_73836810_73836877	0.1965868835226948	AGUGCAA	ENSMUST00000025393.14|Smad4|ENSMUSG00000024515.14|SMAD family member 4
mm39_v1_chr9_+_30941924_30941997	0.1947333882626642	AGUGCAA	ENSMUST00000216649.2|Zbtb44|ENSMUSG00000047412.17|zinc finger and BTB domain containing 44	ENSMUST00000115222.10|Zbtb44|ENSMUSG00000047412.17|zinc finger and BTB domain containing 44
mm39_v1_chr2_-_69416365_69416409	0.19384035876163536	AGUGCAA	ENSMUST00000100051.9|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2	ENSMUST00000092551.5|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2	ENSMUST00000080953.12|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2
mm39_v1_chr5_-_143098726_143098749	0.19221630739623322	AGUGCAA	ENSMUST00000200607.5|Rnf216|ENSMUSG00000045078.13|ring finger protein 216	ENSMUST00000053498.13|Rnf216|ENSMUSG00000045078.13|ring finger protein 216
mm39_v1_chr4_-_126323291_126323349	0.1905901639853397	AGUGCAA	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr10_-_13350106_13350185	0.19008254304665664	AGUGCAA	ENSMUST00000105545.12|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr6_+_117145496_117145545	0.18890801671083124	AGUGCAA	ENSMUST00000112866.8|Cxcl12|ENSMUSG00000061353.12|chemokine (C-X-C motif) ligand 12	ENSMUST00000112871.8|Cxcl12|ENSMUSG00000061353.12|chemokine (C-X-C motif) ligand 12	ENSMUST00000073043.5|Cxcl12|ENSMUSG00000061353.12|chemokine (C-X-C motif) ligand 12
mm39_v1_chr13_+_81031512_81031543	0.18435845314097987	AGUGCAA	ENSMUST00000099356.10|Arrdc3|ENSMUSG00000074794.11|arrestin domain containing 3
mm39_v1_chr8_-_37081091_37081102	0.18414788461590503	AGUGCAA	ENSMUST00000033923.14|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr8_+_129085719_129085787	0.1829785225057167	AGUGCAA	ENSMUST00000026917.10|Nrp1|ENSMUSG00000025810.10|neuropilin 1
mm39_v1_chr2_+_76236870_76236936	0.1827835297453353	AGUGCAA	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr2_+_18069375_18069516	0.18226798486985152	AGUGCAA	ENSMUST00000114671.8|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10	ENSMUST00000114680.9|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
mm39_v1_chr11_+_95603494_95603529	0.17947255361242678	AGUGCAA	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr13_+_64309675_64309729	0.17854214597157597	AGUGCAA	ENSMUST00000021929.10|Habp4|ENSMUSG00000021476.10|hyaluronic acid binding protein 4
mm39_v1_chr16_-_46317318_46317349	0.17780600170739702	AGUGCAA	ENSMUST00000023335.13|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3	ENSMUST00000023334.15|Nectin3|ENSMUSG00000022656.16|nectin cell adhesion molecule 3
mm39_v1_chr11_-_115494692_115494877	0.17727177812003966	AGUGCAA	ENSMUST00000125097.2|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3	ENSMUST00000019135.14|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3	ENSMUST00000106508.10|Gga3|ENSMUSG00000020740.14|golgi associated, gamma adaptin ear containing, ARF binding protein 3
mm39_v1_chr2_+_134627987_134628090	0.1767493018909906	AGUGCAA	ENSMUST00000131552.5|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1	ENSMUST00000110116.8|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1
mm39_v1_chr5_-_116162415_116162567	0.17599974283731037	AGUGCAA	ENSMUST00000031486.14|Prkab1|ENSMUSG00000029513.15|protein kinase, AMP-activated, beta 1 non-catalytic subunit	ENSMUST00000111999.8|Prkab1|ENSMUSG00000029513.15|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm39_v1_chr3_-_104869237_104869237	0.17548512828654808	AGUGCAA	ENSMUST00000029429.6|Wnt2b|ENSMUSG00000027840.6|wingless-type MMTV integration site family, member 2B
mm39_v1_chr16_+_42727926_42728047	0.17079910058921105	AGUGCAA	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr5_-_106606032_106606032	0.17039878288083574	AGUGCAA	ENSMUST00000086795.8|Barhl2|ENSMUSG00000034384.12|BarH like homeobox 2
mm39_v1_chr13_+_81805941_81805965	0.17019298296429022	AGUGCAA	ENSMUST00000049055.8|Lysmd3|ENSMUSG00000035840.8|LysM, putative peptidoglycan-binding, domain containing 3
mm39_v1_chr2_+_93472657_93472733	0.1677550806939112	AGUGCAA	ENSMUST00000042078.10|Alx4|ENSMUSG00000040310.13|aristaless-like homeobox 4	ENSMUST00000111254.2|Alx4|ENSMUSG00000040310.13|aristaless-like homeobox 4
mm39_v1_chr13_+_44884740_44884752	0.16658182573281388	AGUGCAA	ENSMUST00000173246.8|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr9_+_65816206_65816302	0.16572667080707934	AGUGCAA	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr5_-_93192881_93192925	0.1650363083675531	AGUGCAA	ENSMUST00000061328.6|Sowahb|ENSMUSG00000045314.6|sosondowah ankyrin repeat domain family member B
mm39_v1_chr13_-_93328719_93328835	0.16482277402344614	AGUGCAA	ENSMUST00000048702.7|Tent2|ENSMUSG00000042167.7|terminal nucleotidyltransferase 2
mm39_v1_chr13_-_93636224_93636333	0.16375143181170806	AGUGCAA	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr2_-_160208977_160208993	0.16372844297095837	AGUGCAA	ENSMUST00000099126.5|Mafb|ENSMUSG00000074622.5|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm39_v1_chr16_+_33504829_33504842	0.1616200427632013	AGUGCAA	ENSMUST00000152782.8|Heg1|ENSMUSG00000075254.13|heart development protein with EGF-like domains 1
mm39_v1_chr1_-_160958998_160959081	0.16094289028378395	AGUGCAA	ENSMUST00000111611.8|Klhl20|ENSMUSG00000026705.17|kelch-like 20
mm39_v1_chr10_-_67748461_67748515	0.16058166492993636	AGUGCAA	ENSMUST00000064656.8|Zfp365|ENSMUSG00000037855.16|zinc finger protein 365
mm39_v1_chr10_+_60113449_60113546	0.1604824390785799	AGUGCAA	ENSMUST00000105465.8|Psap|ENSMUSG00000004207.15|prosaposin	ENSMUST00000179238.8|Psap|ENSMUSG00000004207.15|prosaposin	ENSMUST00000177779.8|Psap|ENSMUSG00000004207.15|prosaposin	ENSMUST00000004316.15|Psap|ENSMUSG00000004207.15|prosaposin
mm39_v1_chr12_+_84161095_84161165	0.1603934410487624	AGUGCAA	ENSMUST00000123491.8|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000046340.9|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000136159.2|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1
mm39_v1_chr15_+_38869415_38869443	0.16021171151102376	AGUGCAA	ENSMUST00000179165.9|Fzd6|ENSMUSG00000022297.16|frizzled class receptor 6
mm39_v1_chr11_-_28534260_28534325	0.15796524781719784	AGUGCAA	ENSMUST00000093253.10|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000109502.9|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000042534.15|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A
mm39_v1_chr4_-_138641225_138641296	0.15485191585430272	AGUGCAA	ENSMUST00000097830.4|Otud3|ENSMUSG00000041161.9|OTU domain containing 3
mm39_v1_chr11_-_85030761_85030864	0.1543399068477913	AGUGCAA	ENSMUST00000108075.9|Usp32|ENSMUSG00000000804.15|ubiquitin specific peptidase 32
mm39_v1_chr5_-_140634773_140634807	0.15279218288724092	AGUGCAA	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr11_-_61745843_61745899	0.15241846111665408	AGUGCAA	ENSMUST00000004920.4|Ulk2|ENSMUSG00000004798.15|unc-51 like kinase 2
mm39_v1_chr11_+_77873535_77873649	0.15201980812281	AGUGCAA	ENSMUST00000108360.8|Phf12|ENSMUSG00000037791.16|PHD finger protein 12	ENSMUST00000049167.14|Phf12|ENSMUSG00000037791.16|PHD finger protein 12
mm39_v1_chrX_-_107877909_107877987	0.15047281419603262	AGUGCAA	ENSMUST00000101283.4|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3	ENSMUST00000150434.8|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3
mm39_v1_chr9_-_116004265_116004333	0.14917342214104384	AGUGCAA	ENSMUST00000061101.12|Tgfbr2|ENSMUSG00000032440.14|transforming growth factor, beta receptor II
mm39_v1_chr11_-_106811507_106811599	0.14885159379220067	AGUGCAA	ENSMUST00000103067.10|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chr5_-_76452365_76452398	0.14832420644700856	AGUGCAA	ENSMUST00000075159.5|Clock|ENSMUSG00000029238.12|circadian locomotor output cycles kaput
mm39_v1_chr10_+_80972089_80972105	0.1478619502962997	AGUGCAA	ENSMUST00000048128.15|Zbtb7a|ENSMUSG00000035011.16|zinc finger and BTB domain containing 7a
mm39_v1_chr7_-_105282751_105282807	0.14519004220443418	AGUGCAA	ENSMUST00000057525.14|Trim3|ENSMUSG00000036989.17|tripartite motif-containing 3
mm39_v1_chr4_-_44167509_44167609	0.14481754894192878	AGUGCAA	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr1_+_172168764_172168785	0.13848438751390374	AGUGCAA	ENSMUST00000056136.4|Kcnj10|ENSMUSG00000044708.6|potassium inwardly-rectifying channel, subfamily J, member 10
mm39_v1_chr12_-_69728572_69728632	0.1365066614690551	AGUGCAA	ENSMUST00000183277.8|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2	ENSMUST00000035773.14|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2
mm39_v1_chr4_+_86666764_86666797	0.1320045995944215	AGUGCAA	ENSMUST00000045512.15|Dennd4c|ENSMUSG00000038024.18|DENN/MADD domain containing 4C	ENSMUST00000082026.14|Dennd4c|ENSMUSG00000038024.18|DENN/MADD domain containing 4C
mm39_v1_chr7_+_92390811_92390923	0.13130046894036956	AGUGCAA	ENSMUST00000032879.15|Rab30|ENSMUSG00000030643.15|RAB30, member RAS oncogene family
mm39_v1_chr7_-_45367382_45367426	0.13056121117092592	AGUGCAA	ENSMUST00000107737.11|Sphk2|ENSMUSG00000057342.16|sphingosine kinase 2
mm39_v1_chr2_+_118493713_118493809	0.13025246099532262	AGUGCAA	ENSMUST00000099557.10|Pak6|ENSMUSG00000074923.11|p21 (RAC1) activated kinase 6
mm39_v1_chr12_-_79343040_79343086	0.12892282499780625	AGUGCAA	ENSMUST00000218377.2|Zfyve26|ENSMUSG00000066440.6|zinc finger, FYVE domain containing 26	ENSMUST00000021547.8|Zfyve26|ENSMUSG00000066440.6|zinc finger, FYVE domain containing 26
mm39_v1_chr2_-_167334746_167334812	0.12612632266139237	AGUGCAA	ENSMUST00000109211.9|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2	ENSMUST00000057627.16|Spata2|ENSMUSG00000047030.16|spermatogenesis associated 2
mm39_v1_chr10_+_42736345_42736373	0.12534619621841148	AGUGCAA	ENSMUST00000063063.14|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr5_+_28522150_28522217	0.12398839220544432	AGUGCAA	ENSMUST00000114884.8|Rbm33|ENSMUSG00000048271.15|RNA binding motif protein 33	ENSMUST00000059644.13|Rbm33|ENSMUSG00000048271.15|RNA binding motif protein 33	ENSMUST00000030920.6|Rbm33|ENSMUSG00000048271.15|RNA binding motif protein 33
mm39_v1_chr11_-_113574981_113575013	0.12325999175102677	AGUGCAA	ENSMUST00000120194.2|Fam104a|ENSMUSG00000041629.8|family with sequence similarity 104, member A
mm39_v1_chr19_+_41471067_41471128	0.12184336580116902	AGUGCAA	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr11_+_74540284_74540346	0.1207325318404139	AGUGCAA	ENSMUST00000117818.2|Cluh|ENSMUSG00000020741.18|clustered mitochondria (cluA/CLU1) homolog	ENSMUST00000092915.12|Cluh|ENSMUSG00000020741.18|clustered mitochondria (cluA/CLU1) homolog
mm39_v1_chr14_-_122703089_122703089	0.11981639727942602	AGUGCAA	ENSMUST00000039118.7|Zic5|ENSMUSG00000041703.8|zinc finger protein of the cerebellum 5
mm39_v1_chr17_-_45860580_45860603	0.11927309644749452	AGUGCAA	ENSMUST00000180252.3|Tmem151b|ENSMUSG00000096847.3|transmembrane protein 151B
mm39_v1_chr7_+_122723365_122723446	0.11885770350585942	AGUGCAA	ENSMUST00000205514.2|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a	ENSMUST00000094053.7|Tnrc6a|ENSMUSG00000052707.9|trinucleotide repeat containing 6a
mm39_v1_chr9_+_118435755_118435823	0.11798335439100403	AGUGCAA	ENSMUST00000044165.14|Itga9|ENSMUSG00000039115.14|integrin alpha 9
mm39_v1_chr14_-_31139617_31139634	0.11702899798738695	AGUGCAA	ENSMUST00000100730.10|Sh3bp5|ENSMUSG00000021892.15|SH3-domain binding protein 5 (BTK-associated)
mm39_v1_chr3_+_94744844_94744884	0.1163374840818566	AGUGCAA	ENSMUST00000107270.9|Pogz|ENSMUSG00000038902.15|pogo transposable element with ZNF domain
mm39_v1_chr1_-_186438177_186438196	0.11239482228183241	AGUGCAA	ENSMUST00000045288.14|Tgfb2|ENSMUSG00000039239.15|transforming growth factor, beta 2
mm39_v1_chr9_+_72439496_72439553	0.1117691133137105	AGUGCAA	ENSMUST00000163401.9|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7	ENSMUST00000093820.10|Rfx7|ENSMUSG00000037674.16|regulatory factor X, 7
mm39_v1_chr11_+_96256565_96256578	0.10930146502172527	AGUGCAA	ENSMUST00000019117.3|Hoxb1|ENSMUSG00000018973.3|homeobox B1
mm39_v1_chr1_+_105591595_105591648	0.10903334510959208	AGUGCAA	ENSMUST00000039173.13|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	ENSMUST00000086721.10|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	ENSMUST00000190501.7|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
mm39_v1_chr17_+_73414977_73415075	0.10821929178985283	AGUGCAA	ENSMUST00000130574.4|Lclat1|ENSMUSG00000054469.15|lysocardiolipin acyltransferase 1	ENSMUST00000149064.9|Lclat1|ENSMUSG00000054469.15|lysocardiolipin acyltransferase 1	ENSMUST00000067545.8|Lclat1|ENSMUSG00000054469.15|lysocardiolipin acyltransferase 1
mm39_v1_chr1_+_115612458_115612486	0.10682903628594781	AGUGCAA	ENSMUST00000043725.9|Cntnap5a|ENSMUSG00000070695.5|contactin associated protein-like 5A
mm39_v1_chr8_-_87611849_87611935	0.10600183997997512	AGUGCAA	ENSMUST00000034074.8|N4bp1|ENSMUSG00000031652.12|NEDD4 binding protein 1
mm39_v1_chr5_+_43390513_43390580	0.10535260058084688	AGUGCAA	ENSMUST00000166713.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000169035.8|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2	ENSMUST00000114065.9|Cpeb2|ENSMUSG00000039782.16|cytoplasmic polyadenylation element binding protein 2
mm39_v1_chr12_-_67269323_67269354	0.10415541490861338	AGUGCAA	ENSMUST00000037181.16|Mdga2|ENSMUSG00000034912.19|MAM domain containing glycosylphosphatidylinositol anchor 2
mm39_v1_chr12_-_46865709_46865720	0.1035174157956538	AGUGCAA	ENSMUST00000021438.8|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr7_+_99876515_99876606	0.10152231400554378	AGUGCAA	ENSMUST00000084935.11|Pgm2l1|ENSMUSG00000030729.18|phosphoglucomutase 2-like 1
mm39_v1_chr15_+_12205095_12205124	0.10044134250127952	AGUGCAA	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr7_+_132460954_132460996	0.09734975729070328	AGUGCAA	ENSMUST00000084497.12|Abraxas2|ENSMUSG00000030965.20|BRISC complex subunit	ENSMUST00000106161.8|Abraxas2|ENSMUSG00000030965.20|BRISC complex subunit
mm39_v1_chr6_-_134543876_134543959	0.09698841024950029	AGUGCAA	ENSMUST00000032322.15|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6	ENSMUST00000126836.4|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6
mm39_v1_chr6_+_136495784_136495808	0.09633172646743675	AGUGCAA	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr7_-_131012202_131012250	0.09465742662215859	AGUGCAA	ENSMUST00000207243.2|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000128432.3|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000121033.8|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5	ENSMUST00000046306.15|Ikzf5|ENSMUSG00000040167.17|IKAROS family zinc finger 5
mm39_v1_chr4_+_6191084_6191122	0.09351062745876586	AGUGCAA	ENSMUST00000029907.6|Ubxn2b|ENSMUSG00000028243.6|UBX domain protein 2B
mm39_v1_chr2_-_180776920_180777023	0.09341276463014497	AGUGCAA	ENSMUST00000197015.5|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2	ENSMUST00000103050.10|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2	ENSMUST00000081528.13|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2	ENSMUST00000049792.15|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2	ENSMUST00000103048.10|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2	ENSMUST00000103047.10|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2	ENSMUST00000149964.9|Kcnq2|ENSMUSG00000016346.18|potassium voltage-gated channel, subfamily Q, member 2
mm39_v1_chr7_-_133826817_133826865	0.09257217651151464	AGUGCAA	ENSMUST00000067680.11|Adam12|ENSMUSG00000054555.12|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm39_v1_chrX_-_73129195_73129296	0.09243536979936595	AGUGCAA	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chr1_-_64160557_64160650	0.08904118310846174	AGUGCAA	ENSMUST00000055001.10|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)	ENSMUST00000114086.8|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr12_+_3476857_3476925	0.08570599618485134	AGUGCAA	ENSMUST00000111215.10|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000092003.12|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000144247.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000153102.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2
mm39_v1_chr3_+_96465265_96465284	0.08568208415365586	AGUGCAA	ENSMUST00000074519.13|Txnip|ENSMUSG00000038393.15|thioredoxin interacting protein	ENSMUST00000049093.8|Txnip|ENSMUSG00000038393.15|thioredoxin interacting protein
mm39_v1_chr4_-_94491473_94491490	0.08414977225854774	AGUGCAA	ENSMUST00000107107.9|Plaa|ENSMUSG00000028577.14|phospholipase A2, activating protein
mm39_v1_chr5_-_124465946_124466035	0.0828682886531566	AGUGCAA	ENSMUST00000031344.13|Mphosph9|ENSMUSG00000038126.18|M-phase phosphoprotein 9
mm39_v1_chr7_+_49559859_49559894	0.08223668395425268	AGUGCAA	ENSMUST00000056442.12|Slc6a5|ENSMUSG00000039728.16|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm39_v1_chr12_+_71877838_71877948	0.08115860195528708	AGUGCAA	ENSMUST00000223272.2|Daam1|ENSMUSG00000034574.11|dishevelled associated activator of morphogenesis 1	ENSMUST00000085299.4|Daam1|ENSMUSG00000034574.11|dishevelled associated activator of morphogenesis 1
mm39_v1_chr4_-_140867038_140867083	0.08046164059017152	AGUGCAA	ENSMUST00000148204.8|Szrd1|ENSMUSG00000040842.18|SUZ RNA binding domain containing 1	ENSMUST00000102487.4|Szrd1|ENSMUSG00000040842.18|SUZ RNA binding domain containing 1
mm39_v1_chr1_-_132953068_132953154	0.08038902480162659	AGUGCAA	ENSMUST00000186617.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067429.10|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000067398.13|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4	ENSMUST00000188090.7|Mdm4|ENSMUSG00000054387.14|transformed mouse 3T3 cell double minute 4
mm39_v1_chr7_-_119494918_119494975	0.07803426279943919	AGUGCAA	ENSMUST00000059851.14|Dcun1d3|ENSMUSG00000048787.14|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm39_v1_chr4_+_109137462_109137513	0.0761069662314145	AGUGCAA	ENSMUST00000102729.10|Eps15|ENSMUSG00000028552.14|epidermal growth factor receptor pathway substrate 15
mm39_v1_chr10_-_25076008_25076076	0.07559765867727576	AGUGCAA	ENSMUST00000100012.3|Akap7|ENSMUSG00000039166.17|A kinase (PRKA) anchor protein 7
mm39_v1_chr6_-_148797648_148797735	0.07546375995143835	AGUGCAA	ENSMUST00000072324.12|Caprin2|ENSMUSG00000030309.17|caprin family member 2	ENSMUST00000111569.9|Caprin2|ENSMUSG00000030309.17|caprin family member 2
mm39_v1_chr2_+_92430043_92430069	0.0752405654958725	AGUGCAA	ENSMUST00000065797.7|Chst1|ENSMUSG00000027221.6|carbohydrate sulfotransferase 1
mm39_v1_chr1_+_60219724_60219797	0.075071978146097	AGUGCAA	ENSMUST00000160834.8|Nbeal1|ENSMUSG00000073664.12|neurobeachin like 1
mm39_v1_chr6_+_38410848_38410901	0.07477705290000376	AGUGCAA	ENSMUST00000160583.8|Ubn2|ENSMUSG00000038538.18|ubinuclein 2
mm39_v1_chr9_-_44792575_44792621	0.07408058403531803	AGUGCAA	ENSMUST00000114689.8|Kmt2a|ENSMUSG00000002028.14|lysine (K)-specific methyltransferase 2A	ENSMUST00000002095.11|Kmt2a|ENSMUSG00000002028.14|lysine (K)-specific methyltransferase 2A	ENSMUST00000128768.3|Kmt2a|ENSMUSG00000002028.14|lysine (K)-specific methyltransferase 2A
mm39_v1_chr5_-_124170305_124170353	0.07052904301414901	AGUGCAA	ENSMUST00000040967.9|Vps37b|ENSMUSG00000066278.7|vacuolar protein sorting 37B
mm39_v1_chr2_-_25982160_25982189	0.07051753836812247	AGUGCAA	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chr3_+_135144202_135144241	0.07000282729372853	AGUGCAA	ENSMUST00000166033.6|Ube2d3|ENSMUSG00000078578.10|ubiquitin-conjugating enzyme E2D 3
mm39_v1_chr4_+_135899678_135899738	0.06708913661157617	AGUGCAA	ENSMUST00000061721.6|E2f2|ENSMUSG00000018983.10|E2F transcription factor 2
mm39_v1_chr19_-_3625698_3625756	0.06374785413970482	AGUGCAA	ENSMUST00000172362.3|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000025846.16|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000226109.2|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3	ENSMUST00000113997.9|Ppp6r3|ENSMUSG00000024908.16|protein phosphatase 6, regulatory subunit 3
mm39_v1_chr17_-_45997132_45997194	0.06349572979469839	AGUGCAA	ENSMUST00000113523.9|Tmem63b|ENSMUSG00000036026.16|transmembrane protein 63b
mm39_v1_chr11_-_106050927_106050994	0.06310617779040921	AGUGCAA	ENSMUST00000045923.10|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr13_+_14238361_14238407	0.06296031527827535	AGUGCAA	ENSMUST00000129488.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110536.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110534.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000039538.15|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110533.2|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)
mm39_v1_chr19_+_3817396_3817523	0.06227097720256924	AGUGCAA	ENSMUST00000052699.13|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113974.11|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113972.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113973.8|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113977.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B	ENSMUST00000113968.9|Kmt5b|ENSMUSG00000045098.20|lysine methyltransferase 5B
mm39_v1_chr10_-_128481833_128481881	0.06203583296669093	AGUGCAA	ENSMUST00000133342.10|Ikzf4|ENSMUSG00000002578.19|IKAROS family zinc finger 4
mm39_v1_chr2_+_127967951_127967976	0.06076574092975053	AGUGCAA	ENSMUST00000089634.12|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000019281.14|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000110341.9|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103211.8|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)	ENSMUST00000103210.2|Bcl2l11|ENSMUSG00000027381.17|BCL2-like 11 (apoptosis facilitator)
mm39_v1_chr12_-_102671154_102671240	0.06033251711179543	AGUGCAA	ENSMUST00000178697.2|Itpk1|ENSMUSG00000057963.10|inositol 1,3,4-triphosphate 5/6 kinase	ENSMUST00000046518.12|Itpk1|ENSMUSG00000057963.10|inositol 1,3,4-triphosphate 5/6 kinase
mm39_v1_chr5_+_76988444_76988484	0.060105584766941285	AGUGCAA	ENSMUST00000120639.9|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin	ENSMUST00000163347.8|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin	ENSMUST00000121851.2|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin
mm39_v1_chr16_-_31094095_31094109	0.06009155718611191	AGUGCAA	ENSMUST00000060188.14|Ppp1r2|ENSMUSG00000047714.15|protein phosphatase 1, regulatory inhibitor subunit 2
mm39_v1_chrX_+_72386220_72386237	0.05655904972039435	AGUGCAA	ENSMUST00000114499.8|Zfp275|ENSMUSG00000031365.14|zinc finger protein 275	ENSMUST00000033731.4|Zfp275|ENSMUSG00000031365.14|zinc finger protein 275
mm39_v1_chr3_+_60408600_60408663	0.05564821294210198	AGUGCAA	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr3_+_157653051_157653148	0.05504366754618366	AGUGCAA	ENSMUST00000164582.4|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c	ENSMUST00000040787.13|Ankrd13c|ENSMUSG00000039988.15|ankyrin repeat domain 13c
mm39_v1_chr18_+_70701260_70701469	0.05475085162302319	AGUGCAA	ENSMUST00000074058.11|Mbd2|ENSMUSG00000024513.17|methyl-CpG binding domain protein 2	ENSMUST00000114946.4|Mbd2|ENSMUSG00000024513.17|methyl-CpG binding domain protein 2
mm39_v1_chr18_+_53309388_53309448	0.05321739951372823	AGUGCAA	ENSMUST00000037850.7|Snx2|ENSMUSG00000034484.9|sorting nexin 2
mm39_v1_chr5_-_100126773_100126833	0.05314524703200316	AGUGCAA	ENSMUST00000112939.10|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000171786.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000072750.13|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000019128.15|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D	ENSMUST00000172361.8|Hnrnpd|ENSMUSG00000000568.16|heterogeneous nuclear ribonucleoprotein D
mm39_v1_chr7_-_105401398_105401442	0.05146484814287573	AGUGCAA	ENSMUST00000033184.6|Tpp1|ENSMUSG00000030894.6|tripeptidyl peptidase I
mm39_v1_chr2_-_119308094_119308186	0.05113646511371214	AGUGCAA	ENSMUST00000110808.2|Ino80|ENSMUSG00000034154.16|INO80 complex subunit	ENSMUST00000049920.14|Ino80|ENSMUSG00000034154.16|INO80 complex subunit
mm39_v1_chr11_-_107022748_107022781	0.04996329152040843	AGUGCAA	ENSMUST00000057892.15|Bptf|ENSMUSG00000040481.18|bromodomain PHD finger transcription factor
mm39_v1_chr4_+_116578117_116578201	0.04718037355075931	AGUGCAA	ENSMUST00000045542.13|Tesk2|ENSMUSG00000033985.18|testis-specific kinase 2	ENSMUST00000106459.8|Tesk2|ENSMUSG00000033985.18|testis-specific kinase 2
mm39_v1_chr2_-_79287095_79287102	0.04623496291031048	AGUGCAA	ENSMUST00000041099.5|Neurod1|ENSMUSG00000034701.10|neurogenic differentiation 1
mm39_v1_chr6_+_141194886_141194995	0.045928308043229386	AGUGCAA	ENSMUST00000043259.10|Pde3a|ENSMUSG00000041741.11|phosphodiesterase 3A, cGMP inhibited
mm39_v1_chr15_-_81742686_81742741	0.04527490516683639	AGUGCAA	ENSMUST00000050467.9|Tob2|ENSMUSG00000048546.9|transducer of ERBB2, 2	ENSMUST00000231000.2|Tob2|ENSMUSG00000048546.9|transducer of ERBB2, 2
mm39_v1_chr5_+_118307754_118307813	0.04524416010521702	AGUGCAA	ENSMUST00000054836.7|Hrk|ENSMUSG00000046607.7|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm39_v1_chr1_+_87683592_87683839	0.04468354645422373	AGUGCAA	ENSMUST00000144047.8|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000027512.13|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000113186.8|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)	ENSMUST00000113190.3|Atg16l1|ENSMUSG00000026289.16|autophagy related 16-like 1 (S. cerevisiae)
mm39_v1_chr5_-_125467063_125467120	0.04427391492184622	AGUGCAA	ENSMUST00000136312.2|Ubc|ENSMUSG00000008348.10|ubiquitin C
mm39_v1_chr5_+_54155814_54155841	0.044182642899394685	AGUGCAA	ENSMUST00000117661.9|Stim2|ENSMUSG00000039156.20|stromal interaction molecule 2
mm39_v1_chr2_+_173952123_173952191	0.043821997954499245	AGUGCAA	ENSMUST00000044415.16|Npepl1|ENSMUSG00000039263.17|aminopeptidase-like 1
mm39_v1_chr15_-_73056713_73056822	0.04269221304153304	AGUGCAA	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chr4_-_144973423_144973453	0.04260623806320241	AGUGCAA	ENSMUST00000030336.11|Tnfrsf1b|ENSMUSG00000028599.11|tumor necrosis factor receptor superfamily, member 1b
mm39_v1_chr18_+_10725532_10725564	0.04181288159289433	AGUGCAA	ENSMUST00000052838.11|Mib1|ENSMUSG00000024294.15|mindbomb E3 ubiquitin protein ligase 1
mm39_v1_chr10_+_40225272_40225385	0.041419398152633465	AGUGCAA	ENSMUST00000044672.11|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19	ENSMUST00000095743.4|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19
mm39_v1_chr8_-_40964704_40964797	0.040064089627142335	AGUGCAA	ENSMUST00000135269.8|Cnot7|ENSMUSG00000031601.17|CCR4-NOT transcription complex, subunit 7	ENSMUST00000034012.10|Cnot7|ENSMUSG00000031601.17|CCR4-NOT transcription complex, subunit 7
mm39_v1_chr13_+_55840888_55840964	0.03873865956515039	AGUGCAA	ENSMUST00000057844.10|B230219D22Rik|ENSMUSG00000045767.10|RIKEN cDNA B230219D22 gene
mm39_v1_chr2_-_20973692_20973768	0.03809856413419314	AGUGCAA	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr6_-_28261881_28261942	0.03712451661645079	AGUGCAA	ENSMUST00000115320.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000123098.8|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000115321.9|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800	ENSMUST00000155494.2|Zfp800|ENSMUSG00000039841.15|zinc finger protein 800
mm39_v1_chr2_-_132420074_132420153	0.036929918706107394	AGUGCAA	ENSMUST00000110136.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1	ENSMUST00000124107.8|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1	ENSMUST00000060955.12|Gpcpd1|ENSMUSG00000027346.16|glycerophosphocholine phosphodiesterase 1
mm39_v1_chr2_-_179618439_179618458	0.032757846450292845	AGUGCAA	ENSMUST00000041618.13|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4	ENSMUST00000227325.2|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4
mm39_v1_chr10_+_128212953_128213024	0.03259504646369043	AGUGCAA	ENSMUST00000014642.10|Ankrd52|ENSMUSG00000014498.10|ankyrin repeat domain 52
mm39_v1_chr11_+_105480796_105480857	0.03242590895660831	AGUGCAA	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr6_-_59001455_59001534	0.02695970293944827	AGUGCAA	ENSMUST00000089860.12|Fam13a|ENSMUSG00000037709.14|family with sequence similarity 13, member A
mm39_v1_chr4_+_137321451_137321585	0.02389060023799941	AGUGCAA	ENSMUST00000105840.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105839.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000055131.13|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105838.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48
mm39_v1_chr8_+_33876353_33876353	0.023756241685380357	AGUGCAA	ENSMUST00000070340.6|Purg|ENSMUSG00000049184.7|purine-rich element binding protein G	ENSMUST00000078058.5|Purg|ENSMUSG00000049184.7|purine-rich element binding protein G
mm39_v1_chr10_+_24025188_24025274	0.02296227510829192	AGUGCAA	ENSMUST00000020174.7|Stx7|ENSMUSG00000019998.7|syntaxin 7	ENSMUST00000220041.2|Stx7|ENSMUSG00000019998.7|syntaxin 7
mm39_v1_chr3_+_32871669_32871726	0.02232168106154301	AGUGCAA	ENSMUST00000072312.12|Usp13|ENSMUSG00000056900.14|ubiquitin specific peptidase 13 (isopeptidase T-3)	ENSMUST00000108228.8|Usp13|ENSMUSG00000056900.14|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm39_v1_chr11_+_44409775_44409827	0.021617806256970528	AGUGCAA	ENSMUST00000019333.10|Rnf145|ENSMUSG00000019189.14|ring finger protein 145
mm39_v1_chr9_-_65734826_65734859	0.021503838337455658	AGUGCAA	ENSMUST00000159109.2|Zfp609|ENSMUSG00000040524.10|zinc finger protein 609
mm39_v1_chr13_-_43457626_43457689	0.021263144866500515	AGUGCAA	ENSMUST00000055341.7|Gfod1|ENSMUSG00000051335.7|glucose-fructose oxidoreductase domain containing 1
mm39_v1_chr18_-_10706701_10706771	0.019950552432273342	AGUGCAA	ENSMUST00000002549.9|Abhd3|ENSMUSG00000002475.17|abhydrolase domain containing 3	ENSMUST00000117726.9|Abhd3|ENSMUSG00000002475.17|abhydrolase domain containing 3	ENSMUST00000117828.9|Abhd3|ENSMUSG00000002475.17|abhydrolase domain containing 3
mm39_v1_chr7_+_100122192_100122205	0.01939420566556058	AGUGCAA	ENSMUST00000032958.14|Ucp3|ENSMUSG00000032942.15|uncoupling protein 3 (mitochondrial, proton carrier)	ENSMUST00000107059.2|Ucp3|ENSMUSG00000032942.15|uncoupling protein 3 (mitochondrial, proton carrier)
mm39_v1_chr18_-_53877579_53877710	0.018767559820017637	AGUGCAA	ENSMUST00000049811.8|Cep120|ENSMUSG00000048799.9|centrosomal protein 120	ENSMUST00000237062.2|Cep120|ENSMUSG00000048799.9|centrosomal protein 120
mm39_v1_chr4_-_151946219_151946333	0.018421861307629503	AGUGCAA	ENSMUST00000097774.9|Camta1|ENSMUSG00000014592.22|calmodulin binding transcription activator 1
mm39_v1_chr11_-_119438569_119438585	0.015845879818570135	AGUGCAA	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chr18_+_77273510_77273575	0.015569918726676303	AGUGCAA	ENSMUST00000075290.8|St8sia5|ENSMUSG00000025425.19|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	ENSMUST00000079618.11|St8sia5|ENSMUSG00000025425.19|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm39_v1_chr12_+_37158532_37158545	0.015481706136850648	AGUGCAA	ENSMUST00000041183.7|Meox2|ENSMUSG00000036144.7|mesenchyme homeobox 2
mm39_v1_chr3_-_84212069_84212116	0.01477768274208503	AGUGCAA	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr13_+_96679233_96679283	0.014451043113464918	AGUGCAA	ENSMUST00000077672.12|Cert1|ENSMUSG00000021669.16|ceramide transporter 1	ENSMUST00000109444.3|Cert1|ENSMUSG00000021669.16|ceramide transporter 1
mm39_v1_chr1_+_132226308_132226370	0.012747452774444038	AGUGCAA	ENSMUST00000046071.5|Klhdc8a|ENSMUSG00000042115.5|kelch domain containing 8A
mm39_v1_chr2_-_104647041_104647138	0.012223965951311462	AGUGCAA	ENSMUST00000117237.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1	ENSMUST00000231375.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1
mm39_v1_chr8_-_36716445_36716670	0.012220140591176957	AGUGCAA	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr2_+_107120934_107121005	0.012154094373912057	AGUGCAA	ENSMUST00000037012.3|Kcna4|ENSMUSG00000042604.6|potassium voltage-gated channel, shaker-related subfamily, member 4
mm39_v1_chr17_-_33937565_33937664	0.009615628673395729	AGUGCAA	ENSMUST00000174040.2|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000173015.8|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000066121.13|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000186022.7|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000173329.8|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000172767.9|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2
mm39_v1_chr2_-_169973076_169973140	0.009030111932752913	AGUGCAA	ENSMUST00000063710.13|Zfp217|ENSMUSG00000052056.15|zinc finger protein 217
mm39_v1_chrX_+_99019176_99019387	0.008878208433500406	AGUGCAA	ENSMUST00000113781.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113783.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113779.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113776.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113775.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113780.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113778.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000113777.8|Eda|ENSMUSG00000059327.10|ectodysplasin-A	ENSMUST00000071453.3|Eda|ENSMUSG00000059327.10|ectodysplasin-A
mm39_v1_chr5_+_91222470_91222487	0.00878591565782747	AGUGCAA	ENSMUST00000031324.6|Ereg|ENSMUSG00000029377.6|epiregulin
mm39_v1_chr12_+_29988035_29988058	0.006753550704613499	AGUGCAA	ENSMUST00000122328.8|Pxdn|ENSMUSG00000020674.18|peroxidasin	ENSMUST00000118321.3|Pxdn|ENSMUSG00000020674.18|peroxidasin
mm39_v1_chr4_+_47353217_47353226	0.006597411822402546	AGUGCAA	ENSMUST00000007757.15|Tgfbr1|ENSMUSG00000007613.16|transforming growth factor, beta receptor I
mm39_v1_chr2_-_104324745_104324809	0.006433691021117109	AGUGCAA	ENSMUST00000028600.14|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr12_-_3359924_3359975	0.005333820523434364	AGUGCAA	ENSMUST00000021001.10|Rab10|ENSMUSG00000020671.10|RAB10, member RAS oncogene family
mm39_v1_chr1_-_46893206_46893240	0.005057607812229523	AGUGCAA	ENSMUST00000027131.6|Slc39a10|ENSMUSG00000025986.7|solute carrier family 39 (zinc transporter), member 10
mm39_v1_chr3_+_55019502_55019592	0.00493113658854865	AGUGCAA	ENSMUST00000044116.14|Spg20|ENSMUSG00000036580.16|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	ENSMUST00000107971.9|Spg20|ENSMUSG00000036580.16|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	ENSMUST00000118118.8|Spg20|ENSMUSG00000036580.16|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm39_v1_chr9_+_21336198_21336272	0.0034340828907389598	AGUGCAA	ENSMUST00000165766.9|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000173397.8|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000072362.14|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000091087.13|Dnm2|ENSMUSG00000033335.18|dynamin 2	ENSMUST00000115404.11|Dnm2|ENSMUSG00000033335.18|dynamin 2
mm39_v1_chr4_+_21931290_21931367	0.0030865215546162306	AGUGCAA	ENSMUST00000029908.8|Faxc|ENSMUSG00000028246.14|failed axon connections homolog
mm39_v1_chr16_+_16801246_16801278	0.002926580754562648	AGUGCAA	ENSMUST00000232611.2|Mapk1|ENSMUSG00000063358.18|mitogen-activated protein kinase 1	ENSMUST00000069107.14|Mapk1|ENSMUSG00000063358.18|mitogen-activated protein kinase 1
mm39_v1_chr10_-_122912272_122912410	0.0023074372065359423	AGUGCAA	ENSMUST00000219203.2|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking	ENSMUST00000073792.11|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking
mm39_v1_chr16_-_91394522_91394688	0.0021567647417442084	AGUGCAA	ENSMUST00000023686.15|Tmem50b|ENSMUSG00000022964.15|transmembrane protein 50B
mm39_v1_chr1_-_172034354_172034371	0.0017325755326953155	AGUGCAA	ENSMUST00000013842.12|Pea15a|ENSMUSG00000013698.13|phosphoprotein enriched in astrocytes 15A	ENSMUST00000111247.8|Pea15a|ENSMUSG00000013698.13|phosphoprotein enriched in astrocytes 15A
mm39_v1_chr10_+_20024724_20024760	0.0016614686675850085	AGUGCAA	ENSMUST00000116259.5|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7	ENSMUST00000214231.2|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7
mm39_v1_chrX_-_121307036_121307145	0.0001681671683283523	AGUGCAA	ENSMUST00000079490.6|Nap1l3|ENSMUSG00000055733.7|nucleosome assembly protein 1-like 3
mm39_v1_chrX_+_160500623_160500653	0.00012402404077986237	AGUGCAA	ENSMUST00000061514.8|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
