mm39_v1_chr7_+_18910340_18910365	0.14660474656730701	Foxq1	ENSMUST00000117338.8|Eml2|ENSMUSG00000040811.16|echinoderm microtubule associated protein like 2
mm39_v1_chr18_+_13107535_13107731	0.14617902865898863	Foxq1	ENSMUST00000234035.2|Impact|ENSMUSG00000024423.7|impact, RWD domain protein	ENSMUST00000235053.2|Impact|ENSMUSG00000024423.7|impact, RWD domain protein
mm39_v1_chr5_-_121025645_121025675	0.14234113517862718	Foxq1	ENSMUST00000086368.12|Oas1g|ENSMUSG00000066861.15|2'-5' oligoadenylate synthetase 1G
mm39_v1_chr3_+_129326004_129326089	0.1288679176056203	Foxq1	ENSMUST00000199910.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000197070.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000071402.7|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr4_-_87724533_87724562	0.12102588554792075	Foxq1	ENSMUST00000126353.8|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3	ENSMUST00000149357.8|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr19_+_43770619_43770632	0.11535145796518811	Foxq1	ENSMUST00000026208.6|Abcc2|ENSMUSG00000025194.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm39_v1_chr12_-_73160181_73160230	0.10768908362814228	Foxq1	ENSMUST00000043208.8|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4	ENSMUST00000175693.3|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4
mm39_v1_chrX_+_138464065_138464088	0.10649077920508625	Foxq1	ENSMUST00000113027.8|Rnf128|ENSMUSG00000031438.12|ring finger protein 128
mm39_v1_chr15_-_55411560_55411560	0.10263793664566313	Foxq1	ENSMUST00000165356.2|Mrpl13|ENSMUSG00000022370.14|mitochondrial ribosomal protein L13
mm39_v1_chr2_+_156681991_156682062	0.09855467496702053	Foxq1	ENSMUST00000073352.10|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr10_+_34173426_34173509	0.0982746525849648	Foxq1	ENSMUST00000047935.8|Tspyl4|ENSMUSG00000039485.9|TSPY-like 4
mm39_v1_chr6_+_38895902_38895964	0.09459970984998484	Foxq1	ENSMUST00000003017.13|Tbxas1|ENSMUSG00000029925.14|thromboxane A synthase 1, platelet
mm39_v1_chr3_+_31150982_31151003	0.09099844858303181	Foxq1	ENSMUST00000118204.2|Skil|ENSMUSG00000027660.17|SKI-like
mm39_v1_chr4_-_87724512_87724531	0.0906646366338405	Foxq1	ENSMUST00000148059.2|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr2_+_173579285_173579304	0.08883276427751181	Foxq1	ENSMUST00000067530.6|Vapb|ENSMUSG00000054455.6|vesicle-associated membrane protein, associated protein B and C
mm39_v1_chr5_-_115236354_115236354	0.08862625229952617	Foxq1	ENSMUST00000100848.3|Gm10401|ENSMUSG00000072693.3|predicted gene 10401
mm39_v1_chr3_+_96552895_96552924	0.0879545223448358	Foxq1	ENSMUST00000119365.8|Itga10|ENSMUSG00000090210.8|integrin, alpha 10	ENSMUST00000029744.6|Itga10|ENSMUSG00000090210.8|integrin, alpha 10
mm39_v1_chr17_+_30845909_30845965	0.08615775052990818	Foxq1	ENSMUST00000236140.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000236118.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000235390.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr9_-_105398346_105398464	0.08364766036843738	Foxq1	ENSMUST00000176770.8|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering	ENSMUST00000085133.13|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering
mm39_v1_chr19_+_45433899_45433982	0.08262532391179872	Foxq1	ENSMUST00000224478.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein
mm39_v1_chr19_-_36896999_36897023	0.08242102202212233	Foxq1	ENSMUST00000238948.2|Fgfbp3|ENSMUSG00000047632.12|fibroblast growth factor binding protein 3	ENSMUST00000057337.9|Fgfbp3|ENSMUSG00000047632.12|fibroblast growth factor binding protein 3
mm39_v1_chr2_+_156681927_156681952	0.0809954787040376	Foxq1	ENSMUST00000081335.13|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr13_+_28441511_28441583	0.07971786305035432	Foxq1	ENSMUST00000223428.2|Rps18-ps5|ENSMUSG00000113061.2|ribosomal protein S18, pseudogene 5
mm39_v1_chrX_+_37689503_37689568	0.07921281602342276	Foxq1	ENSMUST00000000365.3|Mcts1|ENSMUSG00000000355.14|malignant T cell amplified sequence 1
mm39_v1_chr9_-_100388857_100388909	0.07714712949026795	Foxq1	ENSMUST00000112874.4|Nck1|ENSMUSG00000032475.16|non-catalytic region of tyrosine kinase adaptor protein 1
mm39_v1_chr18_+_69477541_69477601	0.0761525998647031	Foxq1	ENSMUST00000114985.10|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000128706.8|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201781.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202674.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr7_+_16807965_16808014	0.07537984271797693	Foxq1	ENSMUST00000071399.13|Psg16|ENSMUSG00000066760.13|pregnancy specific glycoprotein 16	ENSMUST00000118367.3|Psg16|ENSMUSG00000066760.13|pregnancy specific glycoprotein 16
mm39_v1_chr15_-_102097466_102097493	0.07131273016970854	Foxq1	ENSMUST00000023805.3|Csad|ENSMUSG00000023044.3|cysteine sulfinic acid decarboxylase
mm39_v1_chr11_+_96920751_96920826	0.07085138444426721	Foxq1	ENSMUST00000021249.11|Scrn2|ENSMUSG00000020877.12|secernin 2
mm39_v1_chr11_-_82719850_82719869	0.07038931668725389	Foxq1	ENSMUST00000021036.13|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000074515.11|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000103218.3|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein
mm39_v1_chr8_-_54091980_54092100	0.06966139531577417	Foxq1	ENSMUST00000047768.11|Neil3|ENSMUSG00000039396.12|nei like 3 (E. coli)
mm39_v1_chr5_-_92496730_92496748	0.06942550520626964	Foxq1	ENSMUST00000038816.13|Cxcl10|ENSMUSG00000034855.14|chemokine (C-X-C motif) ligand 10	ENSMUST00000118006.3|Cxcl10|ENSMUSG00000034855.14|chemokine (C-X-C motif) ligand 10
mm39_v1_chr18_+_11790409_11790561	0.06848570563798088	Foxq1	ENSMUST00000047322.8|Rbbp8|ENSMUSG00000041238.17|retinoblastoma binding protein 8, endonuclease
mm39_v1_chr4_-_15945359_15945507	0.06647537531727325	Foxq1	ENSMUST00000029877.9|Decr1|ENSMUSG00000028223.9|2,4-dienoyl CoA reductase 1, mitochondrial
mm39_v1_chr2_-_25498459_25498533	0.0656781482003733	Foxq1	ENSMUST00000058137.9|Rabl6|ENSMUSG00000015087.15|RAB, member RAS oncogene family-like 6
mm39_v1_chr3_+_135531409_135531425	0.06543975287994962	Foxq1	ENSMUST00000180196.8|Slc39a8|ENSMUSG00000053897.16|solute carrier family 39 (metal ion transporter), member 8
mm39_v1_chr5_+_104447037_104447162	0.06358481875586985	Foxq1	ENSMUST00000031246.9|Ibsp|ENSMUSG00000029306.9|integrin binding sialoprotein
mm39_v1_chr7_+_79836581_79836651	0.06285680137917943	Foxq1	ENSMUST00000032754.9|Sema4b|ENSMUSG00000030539.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm39_v1_chr9_+_108437485_108437650	0.06269278669661596	Foxq1	ENSMUST00000081111.14|Impdh2|ENSMUSG00000062867.14|inosine monophosphate dehydrogenase 2	ENSMUST00000193421.2|Impdh2|ENSMUSG00000062867.14|inosine monophosphate dehydrogenase 2
mm39_v1_chr19_-_29721012_29721012	0.05959244939811216	Foxq1	ENSMUST00000175764.9|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr8_+_79236051_79236204	0.05906216186810645	Foxq1	ENSMUST00000209992.2|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm39_v1_chr11_-_107238956_107239005	0.05875245608551786	Foxq1	ENSMUST00000134763.2|Pitpnc1|ENSMUSG00000040430.19|phosphatidylinositol transfer protein, cytoplasmic 1
mm39_v1_chr1_+_43137852_43137871	0.057261606172263314	Foxq1	ENSMUST00000010434.8|AI597479|ENSMUSG00000010290.8|expressed sequence AI597479
mm39_v1_chr6_+_123149847_123149855	0.05636089835700883	Foxq1	ENSMUST00000088455.6|Clec4b2|ENSMUSG00000067767.6|C-type lectin domain family 4, member b2
mm39_v1_chr12_-_83643883_83643895	0.05543212125755734	Foxq1	ENSMUST00000221919.2|Zfyve1|ENSMUSG00000042628.9|zinc finger, FYVE domain containing 1
mm39_v1_chr5_-_138169253_138169296	0.05470199171757003	Foxq1	ENSMUST00000139983.8|Mcm7|ENSMUSG00000029730.17|minichromosome maintenance complex component 7
mm39_v1_chr17_+_19724994_19725062	0.052548216608415896	Foxq1	ENSMUST00000166081.3|Vmn2r100|ENSMUSG00000091859.3|vomeronasal 2, receptor 100	ENSMUST00000231465.2|Vmn2r100|ENSMUSG00000091859.3|vomeronasal 2, receptor 100
mm39_v1_chr19_-_47452840_47452894	0.05251603423228368	Foxq1	ENSMUST00000081619.10|Sh3pxd2a|ENSMUSG00000053617.13|SH3 and PX domains 2A
mm39_v1_chr1_+_87332638_87332686	0.05249119392034209	Foxq1	ENSMUST00000173152.2|Gigyf2|ENSMUSG00000048000.16|GRB10 interacting GYF protein 2	ENSMUST00000173663.2|Gigyf2|ENSMUSG00000048000.16|GRB10 interacting GYF protein 2
mm39_v1_chr16_-_92196954_92196971	0.052103922137424256	Foxq1	ENSMUST00000023672.10|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1
mm39_v1_chr19_-_43663282_43663350	0.05170628933469651	Foxq1	ENSMUST00000046038.9|Slc25a28|ENSMUSG00000040414.9|solute carrier family 25, member 28	ENSMUST00000236433.2|Slc25a28|ENSMUSG00000040414.9|solute carrier family 25, member 28
mm39_v1_chr13_-_32967937_32967955	0.05125095669807883	Foxq1	ENSMUST00000238977.3|Mylk4|ENSMUSG00000044951.18|myosin light chain kinase family, member 4
mm39_v1_chr3_+_129326285_129326376	0.05086686287729614	Foxq1	ENSMUST00000197235.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chrX_-_156351979_156351987	0.050254948323901046	Foxq1	ENSMUST00000065806.5|Yy2|ENSMUSG00000091736.4|Yy2 transcription factor
mm39_v1_chr17_-_35265702_35265739	0.04981014068005136	Foxq1	ENSMUST00000097338.11|Msh5|ENSMUSG00000007035.16|mutS homolog 5
mm39_v1_chr17_-_30845845_30845879	0.048465028966907395	Foxq1	ENSMUST00000235547.2|Glo1|ENSMUSG00000024026.14|glyoxalase 1	ENSMUST00000188852.2|1700097N02Rik|ENSMUSG00000099474.2|RIKEN cDNA 1700097N02 gene
mm39_v1_chr4_+_139350152_139350213	0.045904819512852184	Foxq1	ENSMUST00000039818.10|Aldh4a1|ENSMUSG00000028737.16|aldehyde dehydrogenase 4 family, member A1
mm39_v1_chr9_-_56151334_56151382	0.04572625176340344	Foxq1	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr5_+_24679154_24679212	0.04431784735396105	Foxq1	ENSMUST00000199856.2|Agap3|ENSMUSG00000023353.15|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
mm39_v1_chr14_-_54651442_54651542	0.042637358350827666	Foxq1	ENSMUST00000227334.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr1_-_45542442_45542442	0.04102626493776092	Foxq1	ENSMUST00000086430.5|Col5a2|ENSMUSG00000026042.17|collagen, type V, alpha 2
mm39_v1_chr4_+_132366298_132366430	0.040255037208094625	Foxq1	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr5_-_124717146_124717194	0.039072043251683675	Foxq1	ENSMUST00000031334.15|Eif2b1|ENSMUSG00000029388.15|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm39_v1_chr1_-_44140820_44140833	0.03884183517092042	Foxq1	ENSMUST00000152239.8|Tex30|ENSMUSG00000026049.12|testis expressed 30
mm39_v1_chr9_+_109865810_109865893	0.036128767810358293	Foxq1	ENSMUST00000163190.8|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr1_-_169938060_169938130	0.03440095313616401	Foxq1	ENSMUST00000027985.8|Ddr2|ENSMUSG00000026674.10|discoidin domain receptor family, member 2	ENSMUST00000194690.6|Ddr2|ENSMUSG00000026674.10|discoidin domain receptor family, member 2
mm39_v1_chr13_-_59930059_59930059	0.034384895250386086	Foxq1	ENSMUST00000225581.2|Gm49354|ENSMUSG00000114763.2|predicted gene, 49354
mm39_v1_chr1_-_136273811_136273884	0.03266649927923854	Foxq1	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr13_+_22534534_22534534	0.03160656744662026	Foxq1	ENSMUST00000226909.2|Vmn1r198|ENSMUSG00000095125.3|vomeronasal 1 receptor 198	ENSMUST00000227167.2|Vmn1r198|ENSMUSG00000095125.3|vomeronasal 1 receptor 198	ENSMUST00000226786.2|Vmn1r198|ENSMUSG00000095125.3|vomeronasal 1 receptor 198
mm39_v1_chr13_+_92442488_92442488	0.02941383576021554	Foxq1	ENSMUST00000188317.2|Gm20379|ENSMUSG00000100622.2|predicted gene, 20379
mm39_v1_chr13_+_83723743_83723796	0.02836842288213024	Foxq1	ENSMUST00000198217.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000199210.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr10_+_80591030_80591073	0.0281391698101242	Foxq1	ENSMUST00000105336.9|Dot1l|ENSMUSG00000061589.15|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm39_v1_chr13_+_41071077_41071133	0.027868862021375514	Foxq1	ENSMUST00000067778.8|Gcnt2|ENSMUSG00000021360.17|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	ENSMUST00000225759.2|Gcnt2|ENSMUSG00000021360.17|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm39_v1_chr9_-_39486831_39486865	0.02786482771433325	Foxq1	ENSMUST00000216298.2|Olfr959|ENSMUSG00000059366.4|olfactory receptor 959	ENSMUST00000215194.2|Olfr959|ENSMUSG00000059366.4|olfactory receptor 959
mm39_v1_chr11_-_62283431_62283485	0.027844975082753836	Foxq1	ENSMUST00000151498.9|Ncor1|ENSMUSG00000018501.18|nuclear receptor co-repressor 1
mm39_v1_chr17_-_29162794_29162814	0.027776726487037835	Foxq1	ENSMUST00000232977.2|Pxt1|ENSMUSG00000045378.6|peroxisomal, testis specific 1
mm39_v1_chr6_+_128376729_128376788	0.02697193089063174	Foxq1	ENSMUST00000001561.12|Nrip2|ENSMUSG00000001520.13|nuclear receptor interacting protein 2
mm39_v1_chr2_+_120807498_120807588	0.02691520609829273	Foxq1	ENSMUST00000067582.14|Tmem62|ENSMUSG00000054484.15|transmembrane protein 62
mm39_v1_chr7_+_23833572_23833667	0.02635888169687778	Foxq1	ENSMUST00000205680.2|Zfp235|ENSMUSG00000047603.10|zinc finger protein 235	ENSMUST00000056549.9|Zfp235|ENSMUSG00000047603.10|zinc finger protein 235
mm39_v1_chr4_-_43584386_43584494	0.026301262395642785	Foxq1	ENSMUST00000107884.3|Msmp|ENSMUSG00000078719.3|microseminoprotein, prostate associated
mm39_v1_chr12_-_101924407_101924505	0.026291242578431413	Foxq1	ENSMUST00000159883.2|Atxn3|ENSMUSG00000021189.12|ataxin 3	ENSMUST00000160251.8|Atxn3|ENSMUSG00000021189.12|ataxin 3	ENSMUST00000161011.8|Atxn3|ENSMUSG00000021189.12|ataxin 3	ENSMUST00000021606.12|Atxn3|ENSMUSG00000021189.12|ataxin 3
mm39_v1_chr8_+_79235946_79236030	0.0257929702280944	Foxq1	ENSMUST00000209490.2|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	ENSMUST00000034111.10|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm39_v1_chr10_+_59942274_59942290	0.02498113214402222	Foxq1	ENSMUST00000165024.3|Spock2|ENSMUSG00000058297.17|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm39_v1_chr5_+_130284431_130284471	0.024780261900334066	Foxq1	ENSMUST00000044204.12|Tyw1|ENSMUSG00000056310.15|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm39_v1_chr10_-_115197775_115197867	0.024461652609646625	Foxq1	ENSMUST00000217848.2|Tmem19|ENSMUSG00000069520.7|transmembrane protein 19
mm39_v1_chr1_+_45350698_45350798	0.023312118940796378	Foxq1	ENSMUST00000087883.13|Col3a1|ENSMUSG00000026043.19|collagen, type III, alpha 1
mm39_v1_chr2_-_86061745_86061745	0.022774729692736657	Foxq1	ENSMUST00000216056.2|Olfr1047|ENSMUSG00000075196.4|olfactory receptor 1047
mm39_v1_chr3_+_68491487_68491514	0.022617272975067666	Foxq1	ENSMUST00000182997.3|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr5_-_130284366_130284379	0.02115493598905974	Foxq1	ENSMUST00000026387.11|Sbds|ENSMUSG00000025337.11|SBDS ribosome maturation factor
mm39_v1_chr13_+_94954202_94954242	0.020991909845848606	Foxq1	ENSMUST00000220825.2|Tbca|ENSMUSG00000042043.7|tubulin cofactor A
mm39_v1_chr4_+_134042423_134042437	0.020953319068852103	Foxq1	ENSMUST00000105875.8|Trim63|ENSMUSG00000028834.14|tripartite motif-containing 63	ENSMUST00000030638.7|Trim63|ENSMUSG00000028834.14|tripartite motif-containing 63
mm39_v1_chr10_+_115653152_115653229	0.020835269615608068	Foxq1	ENSMUST00000080630.11|Tspan8|ENSMUSG00000034127.16|tetraspanin 8	ENSMUST00000179196.3|Tspan8|ENSMUSG00000034127.16|tetraspanin 8	ENSMUST00000035563.15|Tspan8|ENSMUSG00000034127.16|tetraspanin 8
mm39_v1_chr3_-_130503041_130503100	0.02072058862596392	Foxq1	ENSMUST00000043937.9|Ostc|ENSMUSG00000041084.9|oligosaccharyltransferase complex subunit (non-catalytic)
mm39_v1_chr7_+_23969822_23969895	0.020074558941068486	Foxq1	ENSMUST00000108438.10|Zfp93|ENSMUSG00000055305.16|zinc finger protein 93
mm39_v1_chr1_+_51328265_51328301	0.019984597951998122	Foxq1	ENSMUST00000051572.8|Cavin2|ENSMUSG00000045954.8|caveolae associated 2
mm39_v1_chr12_-_83643964_83644020	0.019052709428258183	Foxq1	ENSMUST00000048319.6|Zfyve1|ENSMUSG00000042628.9|zinc finger, FYVE domain containing 1
mm39_v1_chr12_+_25024913_25024992	0.01858156648592855	Foxq1	ENSMUST00000066652.7|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000220459.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000222941.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220
mm39_v1_chr1_-_43137768_43137847	0.01838727498238311	Foxq1	ENSMUST00000190427.7|Tgfbrap1|ENSMUSG00000070939.10|transforming growth factor, beta receptor associated protein 1	ENSMUST00000095014.8|Tgfbrap1|ENSMUSG00000070939.10|transforming growth factor, beta receptor associated protein 1
mm39_v1_chr4_+_108704982_108705092	0.01759606644964575	Foxq1	ENSMUST00000102738.4|Kti12|ENSMUSG00000073775.5|KTI12 homolog, chromatin associated
mm39_v1_chr2_-_6726998_6727060	0.017428989742423257	Foxq1	ENSMUST00000182657.2|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr2_+_109522781_109522889	0.017200700459908038	Foxq1	ENSMUST00000111050.10|Bdnf|ENSMUSG00000048482.15|brain derived neurotrophic factor
mm39_v1_chr2_+_76236870_76236936	0.017025941686464725	Foxq1	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr9_+_38259893_38259893	0.01641842861822625	Foxq1	ENSMUST00000216304.2|Olfr898|ENSMUSG00000094588.3|olfactory receptor 898
mm39_v1_chr2_-_181223787_181223801	0.015646943619017896	Foxq1	ENSMUST00000057816.15|Uckl1|ENSMUSG00000089917.8|uridine-cytidine kinase 1-like 1
mm39_v1_chr2_-_7400690_7400735	0.015248074472067745	Foxq1	ENSMUST00000182404.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr7_-_133384449_133384492	0.01491309768538723	Foxq1	ENSMUST00000063669.8|Dhx32|ENSMUSG00000030986.14|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm39_v1_chr9_+_38259707_38259707	0.014418143476062796	Foxq1	ENSMUST00000217063.2|Olfr898|ENSMUSG00000094588.3|olfactory receptor 898
mm39_v1_chr8_+_47439916_47439946	0.013856069847567036	Foxq1	ENSMUST00000039840.15|Enpp6|ENSMUSG00000038173.16|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm39_v1_chr6_+_58573656_58573695	0.013637258203155127	Foxq1	ENSMUST00000031822.13|Abcg2|ENSMUSG00000029802.14|ATP binding cassette subfamily G member 2 (Junior blood group)
mm39_v1_chr2_-_37537224_37537297	0.013003097481720707	Foxq1	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr18_+_37827413_37827444	0.012508351298295927	Foxq1	ENSMUST00000193414.2|Pcdhga5|ENSMUSG00000103567.2|protocadherin gamma subfamily A, 5
mm39_v1_chr2_+_87853118_87853118	0.012426570108888285	Foxq1	ENSMUST00000214438.2|Olfr1161|ENSMUSG00000045150.6|olfactory receptor 1161
mm39_v1_chr10_+_42736771_42736806	0.012402374680805127	Foxq1	ENSMUST00000105494.8|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr19_-_8700728_8700737	0.011541847523846887	Foxq1	ENSMUST00000170157.8|Slc3a2|ENSMUSG00000010095.14|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm39_v1_chrX_+_162694397_162694435	0.011185068382580862	Foxq1	ENSMUST00000140845.2|Ap1s2|ENSMUSG00000031367.16|adaptor-related protein complex 1, sigma 2 subunit
mm39_v1_chr12_-_85317359_85317430	0.011128033431462698	Foxq1	ENSMUST00000166821.8|Mlh3|ENSMUSG00000021245.16|mutL homolog 3	ENSMUST00000019378.8|Mlh3|ENSMUSG00000021245.16|mutL homolog 3	ENSMUST00000220854.2|Mlh3|ENSMUSG00000021245.16|mutL homolog 3
mm39_v1_chr11_-_99383938_99383963	0.010367657820126452	Foxq1	ENSMUST00000006969.8|Krt23|ENSMUSG00000006777.8|keratin 23
mm39_v1_chr10_+_87926932_87926939	0.010133536912415269	Foxq1	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr10_-_116385007_116385068	0.009512361957981412	Foxq1	ENSMUST00000164088.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr14_-_50380137_50380137	0.009417333978925274	Foxq1	ENSMUST00000213685.2|Olfr728|ENSMUSG00000050030.6|olfactory receptor 728
mm39_v1_chrX_-_140979913_140979927	0.00867907051474844	Foxq1	ENSMUST00000042530.4|Gucy2f|ENSMUSG00000042282.5|guanylate cyclase 2f
mm39_v1_chr2_+_89708781_89708781	0.008262198732868004	Foxq1	ENSMUST00000111519.3|Olfr1257|ENSMUSG00000049057.5|olfactory receptor 1257
mm39_v1_chr12_+_69954506_69954519	0.007904562338625742	Foxq1	ENSMUST00000223456.2|Atl1|ENSMUSG00000021066.10|atlastin GTPase 1
mm39_v1_chr19_-_45619559_45619597	0.007579734190268033	Foxq1	ENSMUST00000160718.9|Fbxw4|ENSMUSG00000040913.12|F-box and WD-40 domain protein 4
mm39_v1_chr3_-_57209357_57209440	0.007465679416747537	Foxq1	ENSMUST00000196979.5|Tm4sf1|ENSMUSG00000027800.15|transmembrane 4 superfamily member 1	ENSMUST00000029376.13|Tm4sf1|ENSMUSG00000027800.15|transmembrane 4 superfamily member 1
mm39_v1_chr4_+_34893772_34893788	0.006754546723720763	Foxq1	ENSMUST00000029975.10|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit	ENSMUST00000135871.8|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit	ENSMUST00000108130.2|Cga|ENSMUSG00000028298.11|glycoprotein hormones, alpha subunit
mm39_v1_chr6_-_130258891_130258891	0.006697281634775628	Foxq1	ENSMUST00000112020.2|Klra10|ENSMUSG00000072718.7|killer cell lectin-like receptor subfamily A, member 10
mm39_v1_chr2_-_86059313_86059313	0.0066779507156622415	Foxq1	ENSMUST00000099901.2|Olfr1047|ENSMUSG00000075196.4|olfactory receptor 1047
mm39_v1_chr17_-_34337446_34337475	0.006478636697604588	Foxq1	ENSMUST00000095347.13|Brd2|ENSMUSG00000024335.21|bromodomain containing 2
mm39_v1_chr4_-_45532470_45532470	0.0063415166983129935	Foxq1	ENSMUST00000147448.2|Shb|ENSMUSG00000044813.16|src homology 2 domain-containing transforming protein B
mm39_v1_chr18_-_3280999_3281088	0.006172389961665357	Foxq1	ENSMUST00000049942.13|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr16_+_43184191_43184251	0.006071032888253676	Foxq1	ENSMUST00000156367.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr2_-_51039112_51039127	0.005922644843630813	Foxq1	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chr1_+_156666485_156666548	0.00591984665342406	Foxq1	ENSMUST00000111720.2|Angptl1|ENSMUSG00000033544.7|angiopoietin-like 1
mm39_v1_chr4_+_97660971_97661090	0.0058356298548863945	Foxq1	ENSMUST00000152023.8|Nfia|ENSMUSG00000028565.19|nuclear factor I/A
mm39_v1_chr2_+_110551685_110551836	0.005778274755822452	Foxq1	ENSMUST00000111016.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr12_+_71936500_71936514	0.005691322154969458	Foxq1	ENSMUST00000221317.2|Daam1|ENSMUSG00000034574.11|dishevelled associated activator of morphogenesis 1
mm39_v1_chr18_+_37580692_37580728	0.005457788453814411	Foxq1	ENSMUST00000052387.5|Pcdhb14|ENSMUSG00000044043.5|protocadherin beta 14
mm39_v1_chr12_-_4957212_4957274	0.00545392067434336	Foxq1	ENSMUST00000142867.8|Ubxn2a|ENSMUSG00000020634.13|UBX domain protein 2A
mm39_v1_chrX_+_94942639_94942639	0.005170487552334827	Foxq1	ENSMUST00000082183.8|Zc3h12b|ENSMUSG00000035045.18|zinc finger CCCH-type containing 12B
mm39_v1_chr1_-_82746169_82746186	0.005139021780898429	Foxq1	ENSMUST00000027331.3|Tm4sf20|ENSMUSG00000026149.3|transmembrane 4 L six family member 20
mm39_v1_chr11_+_96920956_96920999	0.004694921722065254	Foxq1	ENSMUST00000153482.2|Scrn2|ENSMUSG00000020877.12|secernin 2
mm39_v1_chr6_-_23655130_23655140	0.003610928353591574	Foxq1	ENSMUST00000104979.2|Rnf148|ENSMUSG00000078179.2|ring finger protein 148
mm39_v1_chr2_+_110551927_110551973	0.0035570397693392296	Foxq1	ENSMUST00000111017.9|Muc15|ENSMUSG00000050808.14|mucin 15
mm39_v1_chr6_+_42241916_42241968	0.003372731564764398	Foxq1	ENSMUST00000031895.13|Casp2|ENSMUSG00000029863.14|caspase 2
mm39_v1_chr5_+_4073343_4073415	0.0032184856176562786	Foxq1	ENSMUST00000238634.2|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr1_-_82748964_82749031	0.0032118343312760754	Foxq1	ENSMUST00000223838.2|Gm47791|ENSMUSG00000114299.2|predicted gene, 47791
mm39_v1_chr5_+_104350475_104350490	0.003192597359400811	Foxq1	ENSMUST00000066708.7|Dmp1|ENSMUSG00000029307.8|dentin matrix protein 1
mm39_v1_chr11_-_99689758_99689758	0.002873520980265649	Foxq1	ENSMUST00000105057.2|Gm11569|ENSMUSG00000078260.2|predicted gene 11569
mm39_v1_chr10_-_107321938_107321995	0.0027520829963190337	Foxq1	ENSMUST00000000445.2|Myf5|ENSMUSG00000000435.2|myogenic factor 5
mm39_v1_chr3_+_20011251_20011296	0.0025233963112858537	Foxq1	ENSMUST00000108328.8|Cp|ENSMUSG00000003617.17|ceruloplasmin
mm39_v1_chr1_+_24717722_24717756	0.0021161133452859975	Foxq1	ENSMUST00000186096.7|Lmbrd1|ENSMUSG00000073725.9|LMBR1 domain containing 1
mm39_v1_chr18_-_60881679_60881768	0.0019087786120208364	Foxq1	ENSMUST00000237783.2|Ndst1|ENSMUSG00000054008.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm39_v1_chr5_-_73787646_73787691	0.0013681298452340829	Foxq1	ENSMUST00000152215.3|Lrrc66|ENSMUSG00000067206.4|leucine rich repeat containing 66
mm39_v1_chr15_-_12549350_12549369	0.0011981443723348682	Foxq1	ENSMUST00000190929.2|Pdzd2|ENSMUSG00000022197.17|PDZ domain containing 2
mm39_v1_chr4_+_107171547_107171594	0.001169853602885255	Foxq1	ENSMUST00000075693.12|Yipf1|ENSMUSG00000057375.14|Yip1 domain family, member 1	ENSMUST00000139527.8|Yipf1|ENSMUSG00000057375.14|Yip1 domain family, member 1
mm39_v1_chr2_-_88963396_88963398	0.000978898722905437	Foxq1	ENSMUST00000214027.2|Olfr1222|ENSMUSG00000075101.5|olfactory receptor 1222	ENSMUST00000215816.3|Olfr1222|ENSMUSG00000075101.5|olfactory receptor 1222
mm39_v1_chr13_-_67442285_67442285	0.0003740319310801122	Foxq1	ENSMUST00000224325.2|Zfp457|ENSMUSG00000055341.11|zinc finger protein 457
mm39_v1_chr19_+_23881821_23882000	0.00025559907210834264	Foxq1	ENSMUST00000237688.2|Apba1|ENSMUSG00000024897.10|amyloid beta (A4) precursor protein binding, family  A, member 1
mm39_v1_chrX_-_74423647_74423647	0.0002536211313508034	Foxq1	ENSMUST00000114085.9|F8|ENSMUSG00000031196.14|coagulation factor VIII
mm39_v1_chr14_+_50630215_50630215	0.00014454045665041688	Foxq1	ENSMUST00000058965.4|Olfr736|ENSMUSG00000047716.5|olfactory receptor 736
mm39_v1_chr18_+_37622518_37622518	0.0001391157295074231	Foxq1	ENSMUST00000055949.4|Pcdhb18|ENSMUSG00000048347.6|protocadherin beta 18
mm39_v1_chr2_+_110551976_110551993	3.797306985532085e-05	Foxq1	ENSMUST00000090332.5|Muc15|ENSMUSG00000050808.14|mucin 15
