mm39_v1_chr6_-_149003171_149003184	0.023561375573405152	GAUAUGU	ENSMUST00000111557.8|Dennd5b|ENSMUSG00000030313.16|DENN/MADD domain containing 5B
mm39_v1_chr10_-_115087309_115087384	0.010818072999437291	GAUAUGU	ENSMUST00000020339.10|Tbc1d15|ENSMUSG00000020130.10|TBC1 domain family, member 15
mm39_v1_chr1_-_22031718_22031805	0.010444725403846522	GAUAUGU	ENSMUST00000029667.13|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173058.8|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5	ENSMUST00000173404.2|Kcnq5|ENSMUSG00000028033.17|potassium voltage-gated channel, subfamily Q, member 5
mm39_v1_chr6_+_114620054_114620066	0.008716334829130985	GAUAUGU	ENSMUST00000032457.17|Atg7|ENSMUSG00000030314.17|autophagy related 7
mm39_v1_chr17_-_56769193_56769243	0.00857547816245331	GAUAUGU	ENSMUST00000086828.10|Ptprs|ENSMUSG00000013236.18|protein tyrosine phosphatase, receptor type, S
mm39_v1_chr2_+_115412148_115412225	0.007495140888712554	GAUAUGU	ENSMUST00000166472.8|Cdin1|ENSMUSG00000040282.14|CDAN1 interacting nuclease 1	ENSMUST00000110918.3|Cdin1|ENSMUSG00000040282.14|CDAN1 interacting nuclease 1
mm39_v1_chr9_-_108141105_108141161	0.007329272440974101	GAUAUGU	ENSMUST00000166905.8|Dag1|ENSMUSG00000039952.16|dystroglycan 1	ENSMUST00000191899.6|Dag1|ENSMUSG00000039952.16|dystroglycan 1
mm39_v1_chr15_+_80595486_80595541	0.006714405451792408	GAUAUGU	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chr1_+_106099482_106099598	0.006634202912409214	GAUAUGU	ENSMUST00000061047.7|Phlpp1|ENSMUSG00000044340.8|PH domain and leucine rich repeat protein phosphatase 1
mm39_v1_chr2_+_49341498_49341571	0.004693060309307165	GAUAUGU	ENSMUST00000092123.11|Epc2|ENSMUSG00000069495.13|enhancer of polycomb homolog 2
mm39_v1_chr13_+_117738972_117739018	0.0037794773527012318	GAUAUGU	ENSMUST00000006991.9|Hcn1|ENSMUSG00000021730.9|hyperpolarization activated cyclic nucleotide gated potassium channel 1
mm39_v1_chr18_-_25886750_25886807	0.003146390264583717	GAUAUGU	ENSMUST00000224553.2|Celf4|ENSMUSG00000024268.17|CUGBP, Elav-like family member 4	ENSMUST00000025117.14|Celf4|ENSMUSG00000024268.17|CUGBP, Elav-like family member 4
mm39_v1_chr3_-_26187883_26187883	0.003041440722512774	GAUAUGU	ENSMUST00000108308.10|Nlgn1|ENSMUSG00000063887.14|neuroligin 1	ENSMUST00000075054.10|Nlgn1|ENSMUSG00000063887.14|neuroligin 1
mm39_v1_chr4_+_11156411_11156453	0.002311477518824259	GAUAUGU	ENSMUST00000029865.4|Trp53inp1|ENSMUSG00000028211.12|transformation related protein 53 inducible nuclear protein 1
mm39_v1_chr15_-_56557920_56557950	0.002309955793820072	GAUAUGU	ENSMUST00000050544.8|Has2|ENSMUSG00000022367.8|hyaluronan synthase 2
mm39_v1_chr11_+_117545618_117545655	0.0022630245650361843	GAUAUGU	ENSMUST00000106344.8|Tnrc6c|ENSMUSG00000025571.14|trinucleotide repeat containing 6C
mm39_v1_chr6_+_14901343_14901363	0.0022486783526328834	GAUAUGU	ENSMUST00000115477.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr2_-_167032068_167032093	0.0020932934025383364	GAUAUGU	ENSMUST00000059826.10|Kcnb1|ENSMUSG00000050556.10|potassium voltage gated channel, Shab-related subfamily, member 1
mm39_v1_chr5_-_76452365_76452398	0.0018024007135471838	GAUAUGU	ENSMUST00000075159.5|Clock|ENSMUSG00000029238.12|circadian locomotor output cycles kaput
mm39_v1_chr6_-_51446752_51446834	0.0015570996343402532	GAUAUGU	ENSMUST00000204188.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000203220.3|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000114459.8|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1	ENSMUST00000090002.10|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr19_+_29499671_29499682	0.0014101025512542437	GAUAUGU	ENSMUST00000043610.13|Ric1|ENSMUSG00000038658.16|RAB6A GEF complex partner 1
mm39_v1_chrX_+_81992467_81992521	0.0013156417993997731	GAUAUGU	ENSMUST00000114000.8|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy
mm39_v1_chr14_-_124914516_124914539	0.001312819135926758	GAUAUGU	ENSMUST00000095529.10|Fgf14|ENSMUSG00000025551.14|fibroblast growth factor 14
mm39_v1_chr14_+_47120311_47120446	0.0013018140737358253	GAUAUGU	ENSMUST00000022386.15|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4	ENSMUST00000228404.2|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4	ENSMUST00000100672.11|Samd4|ENSMUSG00000021838.18|sterile alpha motif domain containing 4
mm39_v1_chr4_+_8691303_8691381	0.001239008835694595	GAUAUGU	ENSMUST00000051558.10|Chd7|ENSMUSG00000041235.13|chromodomain helicase DNA binding protein 7
mm39_v1_chrX_-_140508177_140508259	0.0010432876883005168	GAUAUGU	ENSMUST00000067841.8|Irs4|ENSMUSG00000054667.8|insulin receptor substrate 4
mm39_v1_chr1_-_156131155_156131234	0.0009568710148712834	GAUAUGU	ENSMUST00000141760.4|Tdrd5|ENSMUSG00000060985.16|tudor domain containing 5	ENSMUST00000121146.10|Tdrd5|ENSMUSG00000060985.16|tudor domain containing 5
mm39_v1_chr18_-_79152504_79152606	0.0008508194356601933	GAUAUGU	ENSMUST00000025430.11|Setbp1|ENSMUSG00000024548.12|SET binding protein 1
mm39_v1_chr2_+_105499233_105499259	0.0008377174451745897	GAUAUGU	ENSMUST00000111086.11|Pax6|ENSMUSG00000027168.22|paired box 6	ENSMUST00000111087.10|Pax6|ENSMUSG00000027168.22|paired box 6
mm39_v1_chr1_-_25267894_25267916	0.0006114496728699981	GAUAUGU	ENSMUST00000126626.8|Adgrb3|ENSMUSG00000033569.18|adhesion G protein-coupled receptor B3
mm39_v1_chr7_+_51271742_51271762	0.0004951878711716832	GAUAUGU	ENSMUST00000032710.7|Slc17a6|ENSMUSG00000030500.7|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
mm39_v1_chr9_+_3532778_3532778	3.282922298853466e-05	GAUAUGU	ENSMUST00000115733.3|Gucy1a2|ENSMUSG00000041624.11|guanylate cyclase 1, soluble, alpha 2
