mm39_v1_chr8_+_106786190_106786265	2.3559207020682154	GGAAUGU	ENSMUST00000109308.3|Nfatc3|ENSMUSG00000031902.11|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm39_v1_chr7_-_144493560_144493606	1.9550307294639533	GGAAUGU	ENSMUST00000093962.5|Ccnd1|ENSMUSG00000070348.6|cyclin D1
mm39_v1_chr3_+_121220146_121220188	1.927270169467399	GGAAUGU	ENSMUST00000029773.13|Cnn3|ENSMUSG00000053931.12|calponin 3, acidic
mm39_v1_chr6_-_127128007_127128023	1.513686539771206	GGAAUGU	ENSMUST00000000188.12|Ccnd2|ENSMUSG00000000184.13|cyclin D2
mm39_v1_chr4_+_102617495_102617722	1.2883495101164246	GGAAUGU	ENSMUST00000072481.12|Sgip1|ENSMUSG00000028524.22|SH3-domain GRB2-like (endophilin) interacting protein 1	ENSMUST00000156596.8|Sgip1|ENSMUSG00000028524.22|SH3-domain GRB2-like (endophilin) interacting protein 1	ENSMUST00000080728.13|Sgip1|ENSMUSG00000028524.22|SH3-domain GRB2-like (endophilin) interacting protein 1	ENSMUST00000106882.9|Sgip1|ENSMUSG00000028524.22|SH3-domain GRB2-like (endophilin) interacting protein 1
mm39_v1_chr2_+_116951855_116951880	1.221107007699852	GGAAUGU	ENSMUST00000028829.13|Spred1|ENSMUSG00000027351.15|sprouty protein with EVH-1 domain 1, related sequence
mm39_v1_chr15_-_79571977_79572120	1.0945344185770107	GGAAUGU	ENSMUST00000023061.7|Josd1|ENSMUSG00000022426.7|Josephin domain containing 1
mm39_v1_chr5_+_115465205_115465258	1.0723565278611955	GGAAUGU	ENSMUST00000031513.14|Srsf9|ENSMUSG00000029538.15|serine and arginine-rich splicing factor 9
mm39_v1_chr13_-_99027544_99027571	1.0367859786334293	GGAAUGU	ENSMUST00000109399.9|Tnpo1|ENSMUSG00000009470.18|transportin 1
mm39_v1_chr11_+_90140294_90140312	1.0245963814120855	GGAAUGU	ENSMUST00000004050.7|Mmd|ENSMUSG00000003948.18|monocyte to macrophage differentiation-associated
mm39_v1_chr13_-_96807346_96807444	1.0244732201115967	GGAAUGU	ENSMUST00000022176.15|Hmgcr|ENSMUSG00000021670.15|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm39_v1_chr19_+_42158995_42159096	1.0237705160702602	GGAAUGU	ENSMUST00000169536.8|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27	ENSMUST00000099443.11|Zfyve27|ENSMUSG00000018820.14|zinc finger, FYVE domain containing 27
mm39_v1_chr11_-_31320065_31320081	1.0079584614916262	GGAAUGU	ENSMUST00000020546.3|Stc2|ENSMUSG00000020303.3|stanniocalcin 2
mm39_v1_chr2_-_157408239_157408281	1.0007702340379574	GGAAUGU	ENSMUST00000109528.9|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein	ENSMUST00000088494.3|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein
mm39_v1_chr2_-_32321116_32321186	0.9923959739077143	GGAAUGU	ENSMUST00000127961.3|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	ENSMUST00000136361.8|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	ENSMUST00000052119.14|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm39_v1_chrX_+_158155171_158155285	0.9567684492430327	GGAAUGU	ENSMUST00000087143.7|Eif1ax|ENSMUSG00000067194.7|eukaryotic translation initiation factor 1A, X-linked
mm39_v1_chr9_+_69360902_69360998	0.9539264248022585	GGAAUGU	ENSMUST00000034756.15|Anxa2|ENSMUSG00000032231.15|annexin A2	ENSMUST00000123470.8|Anxa2|ENSMUSG00000032231.15|annexin A2
mm39_v1_chr18_+_73706115_73706115	0.9464244028361297	GGAAUGU	ENSMUST00000091852.5|Mex3c|ENSMUSG00000037253.9|mex3 RNA binding family member C
mm39_v1_chr12_+_32870334_32870360	0.9419634906367762	GGAAUGU	ENSMUST00000020886.9|Nampt|ENSMUSG00000020572.9|nicotinamide phosphoribosyltransferase
mm39_v1_chrX_+_12454031_12454085	0.9217995670000096	GGAAUGU	ENSMUST00000033313.3|Atp6ap2|ENSMUSG00000031007.3|ATPase, H+ transporting, lysosomal accessory protein 2
mm39_v1_chr17_+_29251602_29251655	0.9103410846966603	GGAAUGU	ENSMUST00000130216.3|Srsf3|ENSMUSG00000071172.14|serine and arginine-rich splicing factor 3
mm39_v1_chr5_-_143951671_143951737	0.908706885007119	GGAAUGU	ENSMUST00000031621.11|Ccz1|ENSMUSG00000029617.11|CCZ1 vacuolar protein trafficking and biogenesis associated
mm39_v1_chr5_-_4154681_4154802	0.9046255244099672	GGAAUGU	ENSMUST00000001507.5|Cyp51|ENSMUSG00000001467.6|cytochrome P450, family 51
mm39_v1_chr1_+_43484895_43484994	0.8993803051772005	GGAAUGU	ENSMUST00000086421.9|Nck2|ENSMUSG00000066877.12|non-catalytic region of tyrosine kinase adaptor protein 2
mm39_v1_chr2_-_84481058_84481093	0.8854919435055209	GGAAUGU	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr12_+_3857001_3857064	0.8782944804000602	GGAAUGU	ENSMUST00000020991.15|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A	ENSMUST00000172509.8|Dnmt3a|ENSMUSG00000020661.16|DNA methyltransferase 3A
mm39_v1_chr7_+_141055135_141055153	0.845843211818501	GGAAUGU	ENSMUST00000026585.14|Tspan4|ENSMUSG00000025511.16|tetraspanin 4
mm39_v1_chr11_+_120839879_120839940	0.8249335296392697	GGAAUGU	ENSMUST00000154187.8|Slc16a3|ENSMUSG00000025161.17|solute carrier family 16 (monocarboxylic acid transporters), member 3	ENSMUST00000100130.10|Slc16a3|ENSMUSG00000025161.17|solute carrier family 16 (monocarboxylic acid transporters), member 3	ENSMUST00000129473.8|Slc16a3|ENSMUSG00000025161.17|solute carrier family 16 (monocarboxylic acid transporters), member 3	ENSMUST00000168579.8|Slc16a3|ENSMUSG00000025161.17|solute carrier family 16 (monocarboxylic acid transporters), member 3
mm39_v1_chr1_-_37580084_37580128	0.8033466992529971	GGAAUGU	ENSMUST00000151952.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr1_+_162398256_162398406	0.7846817028270427	GGAAUGU	ENSMUST00000194810.6|Vamp4|ENSMUSG00000026696.16|vesicle-associated membrane protein 4	ENSMUST00000050010.11|Vamp4|ENSMUSG00000026696.16|vesicle-associated membrane protein 4	ENSMUST00000150040.8|Vamp4|ENSMUSG00000026696.16|vesicle-associated membrane protein 4
mm39_v1_chr10_-_117681864_117681940	0.7738155590894414	GGAAUGU	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr2_+_62494622_62494644	0.7507693787928873	GGAAUGU	ENSMUST00000028257.3|Gca|ENSMUSG00000026893.5|grancalcin
mm39_v1_chr16_-_95928804_95928939	0.7318421206625486	GGAAUGU	ENSMUST00000233292.2|Hmgn1|ENSMUSG00000040681.17|high mobility group nucleosomal binding domain 1	ENSMUST00000050884.16|Hmgn1|ENSMUSG00000040681.17|high mobility group nucleosomal binding domain 1
mm39_v1_chr2_+_75489596_75489662	0.7242794846877525	GGAAUGU	ENSMUST00000111964.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000111962.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000111961.8|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000164947.9|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3	ENSMUST00000090792.11|Hnrnpa3|ENSMUSG00000059005.14|heterogeneous nuclear ribonucleoprotein A3
mm39_v1_chr11_+_87938519_87938554	0.7133477818860209	GGAAUGU	ENSMUST00000079866.11|Srsf1|ENSMUSG00000018379.18|serine and arginine-rich splicing factor 1
mm39_v1_chr1_-_170042947_170042989	0.7130073709448203	GGAAUGU	ENSMUST00000027979.14|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1	ENSMUST00000123399.2|Uhmk1|ENSMUSG00000026667.15|U2AF homology motif (UHM) kinase 1
mm39_v1_chr14_-_45626237_45626418	0.6931132818523815	GGAAUGU	ENSMUST00000227865.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000226856.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000226276.2|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1	ENSMUST00000046191.9|Gnpnat1|ENSMUSG00000037722.9|glucosamine-phosphate N-acetyltransferase 1
mm39_v1_chr2_-_127363251_127363295	0.692748497642341	GGAAUGU	ENSMUST00000028850.15|Kcnip3|ENSMUSG00000079056.13|Kv channel interacting protein 3, calsenilin	ENSMUST00000103215.11|Kcnip3|ENSMUSG00000079056.13|Kv channel interacting protein 3, calsenilin
mm39_v1_chr13_+_34346936_34347016	0.6886091815309799	GGAAUGU	ENSMUST00000124996.8|Psmg4|ENSMUSG00000071451.11|proteasome (prosome, macropain) assembly chaperone 4	ENSMUST00000147632.3|Psmg4|ENSMUSG00000071451.11|proteasome (prosome, macropain) assembly chaperone 4
mm39_v1_chr4_+_6365650_6365688	0.6866879595639667	GGAAUGU	ENSMUST00000029912.11|Sdcbp|ENSMUSG00000028249.16|syndecan binding protein	ENSMUST00000103008.12|Sdcbp|ENSMUSG00000028249.16|syndecan binding protein
mm39_v1_chr6_-_4086914_4086972	0.6546297181450905	GGAAUGU	ENSMUST00000049166.5|Bet1|ENSMUSG00000032757.7|Bet1 golgi vesicular membrane trafficking protein
mm39_v1_chr7_+_81508741_81508752	0.6387999104181822	GGAAUGU	ENSMUST00000041890.8|Tm6sf1|ENSMUSG00000038623.10|transmembrane 6 superfamily member 1
mm39_v1_chr11_-_74615496_74615530	0.6351622993235136	GGAAUGU	ENSMUST00000021091.15|Pafah1b1|ENSMUSG00000020745.16|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm39_v1_chr2_+_127112127_127112191	0.6339108919985066	GGAAUGU	ENSMUST00000110375.9|Stard7|ENSMUSG00000027367.17|START domain containing 7
mm39_v1_chr8_-_46605196_46605196	0.6248885623509729	GGAAUGU	ENSMUST00000110378.9|Snx25|ENSMUSG00000038291.17|sorting nexin 25
mm39_v1_chr12_+_100165694_100165773	0.5904864126665709	GGAAUGU	ENSMUST00000110082.11|Calm1|ENSMUSG00000001175.17|calmodulin 1
mm39_v1_chr11_-_115918784_115918826	0.581088703719463	GGAAUGU	ENSMUST00000106454.8|H3f3b|ENSMUSG00000016559.15|H3.3 histone B
mm39_v1_chr19_+_36811615_36811698	0.5802397326279175	GGAAUGU	ENSMUST00000025729.12|Tnks2|ENSMUSG00000024811.12|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm39_v1_chr3_-_105708632_105708694	0.5493410546315527	GGAAUGU	ENSMUST00000090678.11|Rap1a|ENSMUSG00000068798.11|RAS-related protein 1a
mm39_v1_chr6_+_52690714_52690785	0.5337597659876433	GGAAUGU	ENSMUST00000080723.11|Tax1bp1|ENSMUSG00000004535.13|Tax1 (human T cell leukemia virus type I) binding protein 1	ENSMUST00000149588.8|Tax1bp1|ENSMUSG00000004535.13|Tax1 (human T cell leukemia virus type I) binding protein 1
mm39_v1_chr14_-_54815000_54815015	0.5292654480520654	GGAAUGU	ENSMUST00000054487.10|Ajuba|ENSMUSG00000022178.12|ajuba LIM protein
mm39_v1_chr8_-_124586159_124586269	0.5283992886240189	GGAAUGU	ENSMUST00000034452.12|Ccsap|ENSMUSG00000031971.16|centriole, cilia and spindle associated protein
mm39_v1_chr5_+_3393893_3393945	0.5212502877489612	GGAAUGU	ENSMUST00000165117.8|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6	ENSMUST00000197385.2|Cdk6|ENSMUSG00000040274.12|cyclin-dependent kinase 6
mm39_v1_chr8_-_61436249_61436353	0.511815756266567	GGAAUGU	ENSMUST00000004430.14|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000110301.2|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3	ENSMUST00000093490.9|Clcn3|ENSMUSG00000004319.16|chloride channel, voltage-sensitive 3
mm39_v1_chr15_+_81629258_81629333	0.5089714673591706	GGAAUGU	ENSMUST00000109554.3|Zc3h7b|ENSMUSG00000022390.12|zinc finger CCCH type containing 7B	ENSMUST00000230946.2|Zc3h7b|ENSMUSG00000022390.12|zinc finger CCCH type containing 7B
mm39_v1_chr6_-_148732946_148732992	0.5053614674195078	GGAAUGU	ENSMUST00000048418.14|Ipo8|ENSMUSG00000040029.16|importin 8
mm39_v1_chr9_+_32607301_32607417	0.49949122960432796	GGAAUGU	ENSMUST00000034534.13|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000050797.14|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000184887.2|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain
mm39_v1_chr1_-_36574801_36574846	0.49600762060157405	GGAAUGU	ENSMUST00000054665.10|Ankrd23|ENSMUSG00000067653.13|ankyrin repeat domain 23	ENSMUST00000194853.3|Ankrd23|ENSMUSG00000067653.13|ankyrin repeat domain 23
mm39_v1_chr15_-_79430942_79430986	0.49571006525123285	GGAAUGU	ENSMUST00000054014.9|Ddx17|ENSMUSG00000055065.8|DEAD box helicase 17	ENSMUST00000229877.2|Ddx17|ENSMUSG00000055065.8|DEAD box helicase 17
mm39_v1_chr14_-_76024471_76024482	0.49499102885306195	GGAAUGU	ENSMUST00000022580.8|Slc25a30|ENSMUSG00000022003.8|solute carrier family 25, member 30
mm39_v1_chr6_+_100810566_100810624	0.4928191890920439	GGAAUGU	ENSMUST00000063854.7|Ppp4r2|ENSMUSG00000052144.9|protein phosphatase 4, regulatory subunit 2
mm39_v1_chr15_+_58287305_58287361	0.49071600728435	GGAAUGU	ENSMUST00000037270.5|Fam91a1|ENSMUSG00000037119.5|family with sequence similarity 91, member A1
mm39_v1_chr18_-_77652820_77652858	0.47826336780390066	GGAAUGU	ENSMUST00000026494.14|Rnf165|ENSMUSG00000025427.16|ring finger protein 165	ENSMUST00000182024.2|Rnf165|ENSMUSG00000025427.16|ring finger protein 165
mm39_v1_chr11_+_96941420_96941456	0.47687314675481657	GGAAUGU	ENSMUST00000090020.13|Osbpl7|ENSMUSG00000038534.20|oxysterol binding protein-like 7
mm39_v1_chr2_-_156921135_156921196	0.47531366547069565	GGAAUGU	ENSMUST00000069098.7|Soga1|ENSMUSG00000055485.7|suppressor of glucose, autophagy associated 1
mm39_v1_chr5_-_52347826_52347869	0.47189668058518425	GGAAUGU	ENSMUST00000199321.5|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15	ENSMUST00000195922.2|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15	ENSMUST00000031061.12|Dhx15|ENSMUSG00000029169.12|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm39_v1_chr1_+_59521583_59521583	0.47125832643358834	GGAAUGU	ENSMUST00000114246.4|Fzd7|ENSMUSG00000041075.9|frizzled class receptor 7
mm39_v1_chr5_+_67464284_67464318	0.4705893808008294	GGAAUGU	ENSMUST00000113676.6|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9	ENSMUST00000162372.8|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9
mm39_v1_chr2_-_94268426_94268506	0.45874951930213514	GGAAUGU	ENSMUST00000028617.7|Api5|ENSMUSG00000027193.13|apoptosis inhibitor 5
mm39_v1_chr7_-_141014477_141014517	0.4494255425451866	GGAAUGU	ENSMUST00000106007.10|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000150026.2|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000202840.4|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000133206.9|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm39_v1_chr5_-_137074880_137074989	0.4456890263418849	GGAAUGU	ENSMUST00000144303.2|Ap1s1|ENSMUSG00000004849.15|adaptor protein complex AP-1, sigma 1	ENSMUST00000111080.8|Ap1s1|ENSMUSG00000004849.15|adaptor protein complex AP-1, sigma 1
mm39_v1_chr11_-_93859064_93859119	0.43814205664734784	GGAAUGU	ENSMUST00000107844.3|Nme1|ENSMUSG00000037601.12|NME/NM23 nucleoside diphosphate kinase 1	ENSMUST00000170303.2|Gm20390|ENSMUSG00000091228.2|predicted gene 20390
mm39_v1_chr8_-_94739469_94739479	0.4226246945304672	GGAAUGU	ENSMUST00000053766.14|Amfr|ENSMUSG00000031751.15|autocrine motility factor receptor
mm39_v1_chr6_+_134807097_134807146	0.4204641067170686	GGAAUGU	ENSMUST00000046303.12|Crebl2|ENSMUSG00000032652.14|cAMP responsive element binding protein-like 2
mm39_v1_chr16_+_56942050_56942066	0.4203502445240318	GGAAUGU	ENSMUST00000166897.3|Tomm70a|ENSMUSG00000022752.10|translocase of outer mitochondrial membrane 70A
mm39_v1_chr1_+_37469220_37469303	0.4187681985123111	GGAAUGU	ENSMUST00000114925.10|Unc50|ENSMUSG00000026111.16|unc-50 homolog	ENSMUST00000027285.13|Unc50|ENSMUSG00000026111.16|unc-50 homolog	ENSMUST00000144617.8|Unc50|ENSMUSG00000026111.16|unc-50 homolog	ENSMUST00000193979.6|Unc50|ENSMUSG00000026111.16|unc-50 homolog	ENSMUST00000118059.3|Unc50|ENSMUSG00000026111.16|unc-50 homolog	ENSMUST00000193713.2|Unc50|ENSMUSG00000026111.16|unc-50 homolog
mm39_v1_chr17_-_46342739_46342789	0.4152058443964743	GGAAUGU	ENSMUST00000024747.14|Vegfa|ENSMUSG00000023951.19|vascular endothelial growth factor A
mm39_v1_chr5_-_24235646_24235705	0.414196933347493	GGAAUGU	ENSMUST00000197617.5|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A	ENSMUST00000030849.13|Fam126a|ENSMUSG00000028995.15|family with sequence similarity 126, member A
mm39_v1_chr9_-_44679136_44679147	0.4058391390718599	GGAAUGU	ENSMUST00000034607.10|Arcn1|ENSMUSG00000032096.17|archain 1
mm39_v1_chr4_-_134014525_134014575	0.40566444713487654	GGAAUGU	ENSMUST00000145006.8|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105877.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000127857.2|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like	ENSMUST00000105876.9|Pdik1l|ENSMUSG00000050890.16|PDLIM1 interacting kinase 1 like
mm39_v1_chr4_-_126362372_126362446	0.4055419273997057	GGAAUGU	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr16_-_43959559_43959668	0.40479770008213245	GGAAUGU	ENSMUST00000063661.13|Atp6v1a|ENSMUSG00000052459.14|ATPase, H+ transporting, lysosomal V1 subunit A	ENSMUST00000114666.9|Atp6v1a|ENSMUSG00000052459.14|ATPase, H+ transporting, lysosomal V1 subunit A
mm39_v1_chr1_+_185064339_185064413	0.40413025581033024	GGAAUGU	ENSMUST00000027916.13|Bpnt1|ENSMUSG00000026617.17|3'(2'), 5'-bisphosphate nucleotidase 1	ENSMUST00000210277.2|Bpnt1|ENSMUSG00000026617.17|3'(2'), 5'-bisphosphate nucleotidase 1	ENSMUST00000151769.2|Bpnt1|ENSMUSG00000026617.17|3'(2'), 5'-bisphosphate nucleotidase 1	ENSMUST00000110965.2|Bpnt1|ENSMUSG00000026617.17|3'(2'), 5'-bisphosphate nucleotidase 1
mm39_v1_chr9_+_59198829_59198896	0.40085908498975176	GGAAUGU	ENSMUST00000217570.2|Adpgk|ENSMUSG00000025236.12|ADP-dependent glucokinase	ENSMUST00000026266.9|Adpgk|ENSMUSG00000025236.12|ADP-dependent glucokinase
mm39_v1_chr2_+_3285240_3285257	0.39780723276836066	GGAAUGU	ENSMUST00000081932.13|Nmt2|ENSMUSG00000026643.17|N-myristoyltransferase 2
mm39_v1_chr15_-_38079089_38079100	0.39541510839462957	GGAAUGU	ENSMUST00000110336.4|Ubr5|ENSMUSG00000037487.8|ubiquitin protein ligase E3 component n-recognin 5
mm39_v1_chr13_-_85437118_85437178	0.3949735725735437	GGAAUGU	ENSMUST00000109552.3|Rasa1|ENSMUSG00000021549.15|RAS p21 protein activator 1
mm39_v1_chr9_-_62029877_62029900	0.3946742314197142	GGAAUGU	ENSMUST00000185675.7|Glce|ENSMUSG00000032252.15|glucuronyl C5-epimerase
mm39_v1_chrX_-_103457431_103457463	0.39304638944116527	GGAAUGU	ENSMUST00000033695.6|Abcb7|ENSMUSG00000031333.8|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm39_v1_chr12_+_80690985_80691023	0.3891781335940831	GGAAUGU	ENSMUST00000219405.2|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9	ENSMUST00000085245.7|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9
mm39_v1_chr3_-_104960437_104960467	0.38459214041069023	GGAAUGU	ENSMUST00000077548.12|Cttnbp2nl|ENSMUSG00000062127.12|CTTNBP2 N-terminal like
mm39_v1_chr1_+_86454431_86454459	0.3837785033337501	GGAAUGU	ENSMUST00000045897.15|Ptma|ENSMUSG00000026238.15|prothymosin alpha	ENSMUST00000186255.7|Ptma|ENSMUSG00000026238.15|prothymosin alpha	ENSMUST00000188699.7|Ptma|ENSMUSG00000026238.15|prothymosin alpha
mm39_v1_chr7_-_19043955_19043976	0.38357583598947576	GGAAUGU	ENSMUST00000207334.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000208505.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000207716.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000208326.2|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B	ENSMUST00000003640.4|Fosb|ENSMUSG00000003545.4|FBJ osteosarcoma oncogene B
mm39_v1_chr11_-_106679312_106679358	0.3782115728796643	GGAAUGU	ENSMUST00000021062.12|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chrX_-_56438380_56438400	0.3767199488898673	GGAAUGU	ENSMUST00000143310.2|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000098470.9|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome	ENSMUST00000114726.8|Rbmx|ENSMUSG00000031134.17|RNA binding motif protein, X chromosome
mm39_v1_chr11_+_79883885_79883963	0.37431478283649416	GGAAUGU	ENSMUST00000163272.2|Suz12|ENSMUSG00000017548.16|SUZ12 polycomb repressive complex 2 subunit	ENSMUST00000017692.15|Suz12|ENSMUSG00000017548.16|SUZ12 polycomb repressive complex 2 subunit
mm39_v1_chr19_+_36903471_36903541	0.3740978227388198	GGAAUGU	ENSMUST00000099494.4|Btaf1|ENSMUSG00000040565.9|B-TFIID TATA-box binding protein associated factor 1
mm39_v1_chr3_+_129326004_129326089	0.3707863040853554	GGAAUGU	ENSMUST00000199910.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000197070.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000071402.7|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr9_+_65967477_65967554	0.3704117821391192	GGAAUGU	ENSMUST00000034947.7|Ppib|ENSMUSG00000032383.8|peptidylprolyl isomerase B
mm39_v1_chr3_+_151916059_151916102	0.366431638346767	GGAAUGU	ENSMUST00000166984.8|Fubp1|ENSMUSG00000028034.16|far upstream element (FUSE) binding protein 1
mm39_v1_chr15_-_96597610_96597617	0.36573845586234394	GGAAUGU	ENSMUST00000023099.8|Slc38a2|ENSMUSG00000022462.8|solute carrier family 38, member 2
mm39_v1_chr17_+_81251997_81252073	0.36466000261346043	GGAAUGU	ENSMUST00000025092.5|Tmem178|ENSMUSG00000024245.5|transmembrane protein 178
mm39_v1_chr5_-_114518566_114518581	0.35917223317598623	GGAAUGU	ENSMUST00000102581.11|Kctd10|ENSMUSG00000001098.16|potassium channel tetramerisation domain containing 10
mm39_v1_chr9_-_64928927_64928999	0.3550310500529402	GGAAUGU	ENSMUST00000036615.7|Hacd3|ENSMUSG00000033629.7|3-hydroxyacyl-CoA dehydratase 3
mm39_v1_chr7_+_65759198_65759263	0.35323304112170095	GGAAUGU	ENSMUST00000036372.8|Chsy1|ENSMUSG00000032640.11|chondroitin sulfate synthase 1
mm39_v1_chr14_+_113552034_113552040	0.35102013770168544	GGAAUGU	ENSMUST00000072359.8|Tpm3-rs7|ENSMUSG00000058126.8|tropomyosin 3, related sequence 7
mm39_v1_chr10_+_45453907_45454009	0.35100578831477386	GGAAUGU	ENSMUST00000037044.13|Hace1|ENSMUSG00000038822.16|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
mm39_v1_chr7_+_127187910_127188091	0.35041890769047473	GGAAUGU	ENSMUST00000205694.2|Rnf40|ENSMUSG00000030816.9|ring finger protein 40	ENSMUST00000033088.8|Rnf40|ENSMUSG00000030816.9|ring finger protein 40	ENSMUST00000206914.2|Rnf40|ENSMUSG00000030816.9|ring finger protein 40
mm39_v1_chr18_+_21134302_21134398	0.33223571810787506	GGAAUGU	ENSMUST00000234107.2|Rnf138|ENSMUSG00000024317.16|ring finger protein 138	ENSMUST00000072847.12|Rnf138|ENSMUSG00000024317.16|ring finger protein 138
mm39_v1_chr12_+_57277192_57277289	0.3303366953123135	GGAAUGU	ENSMUST00000139049.2|Prps1l3|ENSMUSG00000079104.5|phosphoribosyl pyrophosphate synthetase 1-like 3	ENSMUST00000145003.8|Mipol1|ENSMUSG00000047022.19|mirror-image polydactyly 1	ENSMUST00000123498.8|Mipol1|ENSMUSG00000047022.19|mirror-image polydactyly 1
mm39_v1_chr14_-_72947422_72947467	0.32256973558283103	GGAAUGU	ENSMUST00000089017.12|Fndc3a|ENSMUSG00000033487.15|fibronectin type III domain containing 3A
mm39_v1_chr18_+_35695199_35695313	0.3217400567615405	GGAAUGU	ENSMUST00000236860.2|Matr3|ENSMUSG00000037236.17|matrin 3	ENSMUST00000166793.10|Matr3|ENSMUSG00000037236.17|matrin 3	ENSMUST00000237780.2|Matr3|ENSMUSG00000037236.17|matrin 3	ENSMUST00000236507.2|Matr3|ENSMUSG00000037236.17|matrin 3	ENSMUST00000235960.2|Matr3|ENSMUSG00000037236.17|matrin 3	ENSMUST00000237061.2|Matr3|ENSMUSG00000037236.17|matrin 3
mm39_v1_chr1_+_127132712_127132788	0.3212039760515139	GGAAUGU	ENSMUST00000038361.11|Mgat5|ENSMUSG00000036155.14|mannoside acetylglucosaminyltransferase 5
mm39_v1_chr10_-_86541349_86541373	0.3148259334496686	GGAAUGU	ENSMUST00000020238.14|Hsp90b1|ENSMUSG00000020048.14|heat shock protein 90, beta (Grp94), member 1
mm39_v1_chr2_-_103627937_103628009	0.3143678560926821	GGAAUGU	ENSMUST00000028607.13|Caprin1|ENSMUSG00000027184.15|cell cycle associated protein 1
mm39_v1_chr1_-_55127183_55127276	0.31433001393714427	GGAAUGU	ENSMUST00000027123.15|Hspd1|ENSMUSG00000025980.15|heat shock protein 1 (chaperonin)
mm39_v1_chr5_+_129970882_129970968	0.3141445721879143	GGAAUGU	ENSMUST00000201855.2|Vkorc1l1|ENSMUSG00000066735.9|vitamin K epoxide reductase complex, subunit 1-like 1	ENSMUST00000073945.6|Vkorc1l1|ENSMUSG00000066735.9|vitamin K epoxide reductase complex, subunit 1-like 1
mm39_v1_chrX_+_13147209_13147270	0.31133483988340427	GGAAUGU	ENSMUST00000000804.7|Ddx3x|ENSMUSG00000000787.13|DEAD box helicase 3, X-linked
mm39_v1_chr13_-_53531391_53531433	0.311126009804626	GGAAUGU	ENSMUST00000021920.8|Sptlc1|ENSMUSG00000021468.9|serine palmitoyltransferase, long chain base subunit 1
mm39_v1_chr9_-_59393893_59393919	0.3068120684051083	GGAAUGU	ENSMUST00000171975.8|Arih1|ENSMUSG00000025234.12|ariadne RBR E3 ubiquitin protein ligase 1
mm39_v1_chr15_-_83033508_83033551	0.3058046073039376	GGAAUGU	ENSMUST00000100375.11|Poldip3|ENSMUSG00000041815.15|polymerase (DNA-directed), delta interacting protein 3
mm39_v1_chr13_-_9814407_9814464	0.29843092113136277	GGAAUGU	ENSMUST00000146059.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11	ENSMUST00000110637.8|Zmynd11|ENSMUSG00000021156.18|zinc finger, MYND domain containing 11
mm39_v1_chr6_-_114898739_114898798	0.29664588614759463	GGAAUGU	ENSMUST00000032459.14|Vgll4|ENSMUSG00000030315.16|vestigial like family member 4
mm39_v1_chr2_-_68302612_68302660	0.2953990195961228	GGAAUGU	ENSMUST00000102715.4|Stk39|ENSMUSG00000027030.16|serine/threonine kinase 39
mm39_v1_chr13_+_76532470_76532654	0.2944118315039996	GGAAUGU	ENSMUST00000125209.8|Mctp1|ENSMUSG00000021596.17|multiple C2 domains, transmembrane 1
mm39_v1_chr8_-_26330783_26330822	0.28714438512216967	GGAAUGU	ENSMUST00000110608.3|Ash2l|ENSMUSG00000031575.19|ASH2 like histone lysine methyltransferase complex subunit	ENSMUST00000068892.15|Ash2l|ENSMUSG00000031575.19|ASH2 like histone lysine methyltransferase complex subunit
mm39_v1_chr2_+_31462780_31462841	0.28631595047201314	GGAAUGU	ENSMUST00000137889.7|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000194386.6|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3	ENSMUST00000055244.13|Fubp3|ENSMUSG00000026843.16|far upstream element (FUSE) binding protein 3
mm39_v1_chr5_+_8096074_8096081	0.28263818163622817	GGAAUGU	ENSMUST00000088786.11|Sri|ENSMUSG00000003161.16|sorcin
mm39_v1_chr9_-_44318823_44318897	0.2809318555436458	GGAAUGU	ENSMUST00000034623.8|Trappc4|ENSMUSG00000032112.11|trafficking protein particle complex 4
mm39_v1_chr11_-_78056347_78056415	0.2800380758628453	GGAAUGU	ENSMUST00000017530.4|Traf4|ENSMUSG00000017386.11|TNF receptor associated factor 4
mm39_v1_chr11_-_86648309_86648399	0.2797102215500972	GGAAUGU	ENSMUST00000060766.16|Cltc|ENSMUSG00000047126.18|clathrin, heavy polypeptide (Hc)	ENSMUST00000103186.11|Cltc|ENSMUSG00000047126.18|clathrin, heavy polypeptide (Hc)
mm39_v1_chr4_+_137943603_137943636	0.27404486427886293	GGAAUGU	ENSMUST00000105827.8|Hp1bp3|ENSMUSG00000028759.14|heterochromatin protein 1, binding protein 3
mm39_v1_chr11_-_63813083_63813119	0.26815600596937567	GGAAUGU	ENSMUST00000094103.4|Hs3st3b1|ENSMUSG00000070407.6|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
mm39_v1_chr12_+_78795763_78795793	0.26572400051877043	GGAAUGU	ENSMUST00000082024.7|Mpp5|ENSMUSG00000021112.10|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm39_v1_chr19_+_8906916_8906945	0.264466022388416	GGAAUGU	ENSMUST00000096241.6|Eml3|ENSMUSG00000071647.6|echinoderm microtubule associated protein like 3
mm39_v1_chr12_-_59266511_59266563	0.26317339548262914	GGAAUGU	ENSMUST00000043204.8|Fbxo33|ENSMUSG00000035329.8|F-box protein 33
mm39_v1_chr1_-_178165223_178165362	0.26242795717624257	GGAAUGU	ENSMUST00000037748.9|Hnrnpu|ENSMUSG00000039630.11|heterogeneous nuclear ribonucleoprotein U
mm39_v1_chr5_-_92231314_92231416	0.26048804205890996	GGAAUGU	ENSMUST00000169094.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2	ENSMUST00000167918.8|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2
mm39_v1_chr9_+_108673171_108673330	0.2583072181255256	GGAAUGU	ENSMUST00000195514.6|Ip6k2|ENSMUSG00000032599.13|inositol hexaphosphate kinase 2	ENSMUST00000085018.6|Ip6k2|ENSMUSG00000032599.13|inositol hexaphosphate kinase 2	ENSMUST00000192028.6|Ip6k2|ENSMUSG00000032599.13|inositol hexaphosphate kinase 2
mm39_v1_chr2_+_109721189_109721226	0.25827178944273954	GGAAUGU	ENSMUST00000028583.8|Lin7c|ENSMUSG00000027162.8|lin-7 homolog C (C. elegans)
mm39_v1_chr3_+_14643669_14643756	0.2551951262801732	GGAAUGU	ENSMUST00000029069.13|E2f5|ENSMUSG00000027552.15|E2F transcription factor 5	ENSMUST00000165922.3|E2f5|ENSMUSG00000027552.15|E2F transcription factor 5
mm39_v1_chr3_-_58433313_58433318	0.2507980338945205	GGAAUGU	ENSMUST00000029385.9|Serp1|ENSMUSG00000027808.9|stress-associated endoplasmic reticulum protein 1
mm39_v1_chr18_+_56705894_56705894	0.25007311292531487	GGAAUGU	ENSMUST00000008445.7|Phax|ENSMUSG00000008301.12|phosphorylated adaptor for RNA export
mm39_v1_chr15_-_98661076_98661101	0.23448195189203236	GGAAUGU	ENSMUST00000053183.12|Arf3|ENSMUSG00000051853.11|ADP-ribosylation factor 3
mm39_v1_chr18_-_61919707_61919773	0.23410893128171534	GGAAUGU	ENSMUST00000120472.2|Afap1l1|ENSMUSG00000033032.16|actin filament associated protein 1-like 1
mm39_v1_chr3_-_84489783_84489841	0.22689928861383535	GGAAUGU	ENSMUST00000107687.9|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1	ENSMUST00000098990.10|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1
mm39_v1_chr6_+_7844759_7844859	0.22403465514171855	GGAAUGU	ENSMUST00000040159.6|C1galt1|ENSMUSG00000042460.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm39_v1_chr19_+_41900360_41900371	0.22387382908261413	GGAAUGU	ENSMUST00000011896.8|Pgam1|ENSMUSG00000011752.8|phosphoglycerate mutase 1
mm39_v1_chr4_+_141028539_141028561	0.21975017063795477	GGAAUGU	ENSMUST00000006614.3|Epha2|ENSMUSG00000006445.4|Eph receptor A2
mm39_v1_chr8_-_8711211_8711250	0.21679972466794326	GGAAUGU	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr5_-_33940053_33940161	0.211951824540371	GGAAUGU	ENSMUST00000148451.2|Letm1|ENSMUSG00000005299.7|leucine zipper-EF-hand containing transmembrane protein 1	ENSMUST00000005431.6|Letm1|ENSMUSG00000005299.7|leucine zipper-EF-hand containing transmembrane protein 1
mm39_v1_chr5_+_125518609_125518678	0.21124498719116475	GGAAUGU	ENSMUST00000049040.14|Bri3bp|ENSMUSG00000037905.14|Bri3 binding protein
mm39_v1_chr7_-_113853894_113853974	0.2100018274872907	GGAAUGU	ENSMUST00000033012.9|Copb1|ENSMUSG00000030754.10|coatomer protein complex, subunit beta 1
mm39_v1_chr10_+_34173426_34173509	0.20285397364702554	GGAAUGU	ENSMUST00000047935.8|Tspyl4|ENSMUSG00000039485.9|TSPY-like 4
mm39_v1_chr15_-_79718423_79718447	0.20128066270152636	GGAAUGU	ENSMUST00000109623.8|Cbx6|ENSMUSG00000089715.13|chromobox 6	ENSMUST00000023060.13|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000089299.6|Npcd|ENSMUSG00000089837.10|neuronal pentraxin chromo domain	ENSMUST00000109625.8|Cbx6|ENSMUSG00000089715.13|chromobox 6
mm39_v1_chr12_-_69245191_69245203	0.198526472323903	GGAAUGU	ENSMUST00000021356.6|Dnaaf2|ENSMUSG00000020973.8|dynein, axonemal assembly factor 2
mm39_v1_chr17_-_71158052_71158064	0.19829212761653542	GGAAUGU	ENSMUST00000186358.6|Tgif1|ENSMUSG00000047407.18|TGFB-induced factor homeobox 1
mm39_v1_chr2_-_173118315_173118336	0.1948979867915171	GGAAUGU	ENSMUST00000036248.13|Pmepa1|ENSMUSG00000038400.16|prostate transmembrane protein, androgen induced 1
mm39_v1_chr5_-_21156766_21156824	0.19463201751104003	GGAAUGU	ENSMUST00000036489.10|Rsbn1l|ENSMUSG00000039968.10|round spermatid basic protein 1-like
mm39_v1_chr9_+_77661808_77661823	0.19344213106608396	GGAAUGU	ENSMUST00000034905.9|Gclc|ENSMUSG00000032350.10|glutamate-cysteine ligase, catalytic subunit
mm39_v1_chr12_-_21467437_21467638	0.19266487976283134	GGAAUGU	ENSMUST00000103002.8|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	ENSMUST00000155480.9|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	ENSMUST00000135088.9|Ywhaq|ENSMUSG00000076432.14|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
mm39_v1_chrX_-_100312629_100312629	0.18626456475879874	GGAAUGU	ENSMUST00000117736.2|Gm20489|ENSMUSG00000092463.2|predicted gene 20489
mm39_v1_chr14_+_79718604_79718634	0.18244776077282282	GGAAUGU	ENSMUST00000040131.13|Elf1|ENSMUSG00000036461.17|E74-like factor 1
mm39_v1_chr7_-_125799644_125799673	0.18128974570345824	GGAAUGU	ENSMUST00000168189.8|Xpo6|ENSMUSG00000000131.16|exportin 6
mm39_v1_chr15_-_36794741_36794791	0.18056681190232338	GGAAUGU	ENSMUST00000110361.8|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000022894.14|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	ENSMUST00000110359.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr19_+_46587523_46587617	0.1800775983907197	GGAAUGU	ENSMUST00000138302.9|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like	ENSMUST00000099376.11|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like
mm39_v1_chr8_+_85763534_85763566	0.17982180304037285	GGAAUGU	ENSMUST00000093360.12|Tnpo2|ENSMUSG00000031691.15|transportin 2 (importin 3, karyopherin beta 2b)
mm39_v1_chr16_-_91485591_91485663	0.1787485023664474	GGAAUGU	ENSMUST00000138560.2|Donson|ENSMUSG00000022960.14|downstream neighbor of SON	ENSMUST00000117159.8|Donson|ENSMUSG00000022960.14|downstream neighbor of SON	ENSMUST00000114031.8|Donson|ENSMUSG00000022960.14|downstream neighbor of SON	ENSMUST00000023682.12|Donson|ENSMUSG00000022960.14|downstream neighbor of SON
mm39_v1_chr1_-_149836974_149837058	0.1787423470865825	GGAAUGU	ENSMUST00000190507.2|Pla2g4a|ENSMUSG00000056220.15|phospholipase A2, group IVA (cytosolic, calcium-dependent)	ENSMUST00000070200.15|Pla2g4a|ENSMUSG00000056220.15|phospholipase A2, group IVA (cytosolic, calcium-dependent)
mm39_v1_chr17_-_81035453_81035522	0.1770269846137448	GGAAUGU	ENSMUST00000234133.2|Map4k3|ENSMUSG00000024242.16|mitogen-activated protein kinase kinase kinase kinase 3	ENSMUST00000112389.9|Map4k3|ENSMUSG00000024242.16|mitogen-activated protein kinase kinase kinase kinase 3	ENSMUST00000025089.9|Map4k3|ENSMUSG00000024242.16|mitogen-activated protein kinase kinase kinase kinase 3
mm39_v1_chr3_+_89622323_89622388	0.17492085322954568	GGAAUGU	ENSMUST00000098924.9|Adar|ENSMUSG00000027951.17|adenosine deaminase, RNA-specific
mm39_v1_chr10_-_75757393_75757461	0.16584541115348528	GGAAUGU	ENSMUST00000121304.2|Smarcb1|ENSMUSG00000000902.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	ENSMUST00000000925.10|Smarcb1|ENSMUSG00000000902.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
mm39_v1_chr4_+_102112189_102112200	0.1653765039140105	GGAAUGU	ENSMUST00000106908.9|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr5_+_69714279_69714437	0.16247955051713447	GGAAUGU	ENSMUST00000087228.11|Guf1|ENSMUSG00000029208.17|GUF1 homolog, GTPase	ENSMUST00000031113.13|Guf1|ENSMUSG00000029208.17|GUF1 homolog, GTPase	ENSMUST00000173205.3|Guf1|ENSMUSG00000029208.17|GUF1 homolog, GTPase
mm39_v1_chr8_+_107877252_107877322	0.16104641569717323	GGAAUGU	ENSMUST00000034400.5|Cyb5b|ENSMUSG00000031924.5|cytochrome b5 type B
mm39_v1_chr16_-_31019967_31020064	0.15964118399070795	GGAAUGU	ENSMUST00000230614.2|Acap2|ENSMUSG00000049076.13|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	ENSMUST00000058033.9|Acap2|ENSMUSG00000049076.13|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
mm39_v1_chr15_+_12321502_12321552	0.15828610726183667	GGAAUGU	ENSMUST00000059680.7|Golph3|ENSMUSG00000022200.9|golgi phosphoprotein 3
mm39_v1_chr17_-_84495364_84495381	0.15240090341690832	GGAAUGU	ENSMUST00000060366.7|Zfp36l2|ENSMUSG00000045817.9|zinc finger protein 36, C3H type-like 2
mm39_v1_chr3_+_152052102_152052172	0.15221389358549847	GGAAUGU	ENSMUST00000117492.9|Usp33|ENSMUSG00000025437.16|ubiquitin specific peptidase 33	ENSMUST00000026507.13|Usp33|ENSMUSG00000025437.16|ubiquitin specific peptidase 33	ENSMUST00000197748.5|Usp33|ENSMUSG00000025437.16|ubiquitin specific peptidase 33
mm39_v1_chr3_+_142470806_142470806	0.15125668116199945	GGAAUGU	ENSMUST00000029938.10|Gtf2b|ENSMUSG00000028271.10|general transcription factor IIB
mm39_v1_chr9_-_96993169_96993214	0.14973911388388453	GGAAUGU	ENSMUST00000085206.11|Slc25a36|ENSMUSG00000032449.14|solute carrier family 25, member 36
mm39_v1_chr11_+_44409775_44409827	0.1491723507116034	GGAAUGU	ENSMUST00000019333.10|Rnf145|ENSMUSG00000019189.14|ring finger protein 145
mm39_v1_chr18_-_14815807_14815971	0.14899630772487218	GGAAUGU	ENSMUST00000040964.13|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit	ENSMUST00000234524.2|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit	ENSMUST00000092041.11|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit	ENSMUST00000040924.9|Ss18|ENSMUSG00000037013.18|SS18, nBAF chromatin remodeling complex subunit
mm39_v1_chr2_+_57127665_57127741	0.1477662890226363	GGAAUGU	ENSMUST00000169687.8|Gpd2|ENSMUSG00000026827.13|glycerol phosphate dehydrogenase 2, mitochondrial
mm39_v1_chr4_+_46450892_46450903	0.14703742187307148	GGAAUGU	ENSMUST00000102926.5|Anp32b|ENSMUSG00000028333.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm39_v1_chr2_-_84508385_84508462	0.14544509606254832	GGAAUGU	ENSMUST00000189772.2|Gm28635|ENSMUSG00000101645.2|predicted gene 28635	ENSMUST00000053664.9|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2	ENSMUST00000111664.8|Tmx2|ENSMUSG00000050043.17|thioredoxin-related transmembrane protein 2
mm39_v1_chr16_-_22084700_22084755	0.14509767999730883	GGAAUGU	ENSMUST00000161286.8|Tra2b|ENSMUSG00000022858.17|transformer 2 beta
mm39_v1_chr8_+_71151581_71151599	0.14373557555656594	GGAAUGU	ENSMUST00000095267.8|Jund|ENSMUSG00000071076.9|jun D proto-oncogene
mm39_v1_chr9_+_32027335_32027432	0.1395485567556395	GGAAUGU	ENSMUST00000174641.8|Arhgap32|ENSMUSG00000041444.15|Rho GTPase activating protein 32
mm39_v1_chr3_+_152101618_152101697	0.13837548582433673	GGAAUGU	ENSMUST00000106100.9|Zzz3|ENSMUSG00000039068.17|zinc finger, ZZ domain containing 3
mm39_v1_chr18_+_44513547_44513644	0.1381192284737995	GGAAUGU	ENSMUST00000202306.2|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2	ENSMUST00000025350.10|Dcp2|ENSMUSG00000024472.10|decapping mRNA 2
mm39_v1_chr9_+_68561042_68561068	0.13388853240540555	GGAAUGU	ENSMUST00000034766.14|Rora|ENSMUSG00000032238.18|RAR-related orphan receptor alpha
mm39_v1_chr4_-_57143437_57143626	0.13063849376782957	GGAAUGU	ENSMUST00000095076.10|Epb41l4b|ENSMUSG00000028434.13|erythrocyte membrane protein band 4.1 like 4b	ENSMUST00000030142.4|Epb41l4b|ENSMUSG00000028434.13|erythrocyte membrane protein band 4.1 like 4b
mm39_v1_chrX_+_35861851_35861870	0.1293280994952184	GGAAUGU	ENSMUST00000073339.7|Pgrmc1|ENSMUSG00000006373.11|progesterone receptor membrane component 1
mm39_v1_chr9_+_37400577_37400622	0.1288323892225727	GGAAUGU	ENSMUST00000211060.2|Msantd2|ENSMUSG00000042138.10|Myb/SANT-like DNA-binding domain containing 2	ENSMUST00000239463.2|Msantd2|ENSMUSG00000042138.10|Myb/SANT-like DNA-binding domain containing 2	ENSMUST00000048604.8|Msantd2|ENSMUSG00000042138.10|Myb/SANT-like DNA-binding domain containing 2
mm39_v1_chr16_-_17745999_17746083	0.1278386016507657	GGAAUGU	ENSMUST00000003622.16|Slc25a1|ENSMUSG00000003528.16|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm39_v1_chr9_-_56151334_56151382	0.1274792520398154	GGAAUGU	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr11_+_96209093_96209093	0.1266428658977324	GGAAUGU	ENSMUST00000049241.9|Hoxb4|ENSMUSG00000038692.9|homeobox B4
mm39_v1_chr16_+_31482745_31482857	0.12476056956657598	GGAAUGU	ENSMUST00000100001.10|Dlg1|ENSMUSG00000022770.18|discs large MAGUK scaffold protein 1	ENSMUST00000064477.14|Dlg1|ENSMUSG00000022770.18|discs large MAGUK scaffold protein 1
mm39_v1_chr6_-_86742847_86742902	0.1197221605351279	GGAAUGU	ENSMUST00000113675.8|Anxa4|ENSMUSG00000029994.18|annexin A4
mm39_v1_chr14_-_4808744_4808823	0.1185598215518408	GGAAUGU	ENSMUST00000022303.17|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta	ENSMUST00000091471.12|Thrb|ENSMUSG00000021779.20|thyroid hormone receptor beta
mm39_v1_chrX_+_151016224_151016268	0.11779796870994842	GGAAUGU	ENSMUST00000112588.9|Kdm5c|ENSMUSG00000025332.15|lysine (K)-specific demethylase 5C	ENSMUST00000082177.13|Kdm5c|ENSMUSG00000025332.15|lysine (K)-specific demethylase 5C
mm39_v1_chr3_+_69224189_69224202	0.11643821169864885	GGAAUGU	ENSMUST00000029355.9|Ppm1l|ENSMUSG00000027784.11|protein phosphatase 1 (formerly 2C)-like
mm39_v1_chr4_+_53440516_53440684	0.11435691205637928	GGAAUGU	ENSMUST00000107651.9|Slc44a1|ENSMUSG00000028412.18|solute carrier family 44, member 1	ENSMUST00000107647.8|Slc44a1|ENSMUSG00000028412.18|solute carrier family 44, member 1
mm39_v1_chr18_-_7626808_7626878	0.1142407062694035	GGAAUGU	ENSMUST00000234812.2|Mpp7|ENSMUSG00000057440.9|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	ENSMUST00000235093.2|Mpp7|ENSMUSG00000057440.9|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	ENSMUST00000234571.2|Mpp7|ENSMUSG00000057440.9|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	ENSMUST00000115869.4|Mpp7|ENSMUSG00000057440.9|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
mm39_v1_chr7_-_132616977_132617058	0.11333547544328612	GGAAUGU	ENSMUST00000169570.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr2_-_153371861_153371907	0.11147108818400923	GGAAUGU	ENSMUST00000035346.14|Nol4l|ENSMUSG00000061411.13|nucleolar protein 4-like
mm39_v1_chr7_-_81584081_81584221	0.10916664243588677	GGAAUGU	ENSMUST00000026094.6|Hdgfl3|ENSMUSG00000025104.14|HDGF like 3	ENSMUST00000107305.8|Hdgfl3|ENSMUSG00000025104.14|HDGF like 3
mm39_v1_chr5_-_34345014_34345083	0.10765129801496018	GGAAUGU	ENSMUST00000042701.13|Mxd4|ENSMUSG00000037235.14|Max dimerization protein 4	ENSMUST00000119171.2|Mxd4|ENSMUSG00000037235.14|Max dimerization protein 4
mm39_v1_chr11_+_29122890_29122926	0.10564812752958089	GGAAUGU	ENSMUST00000102856.9|Ppp4r3b|ENSMUSG00000020463.16|protein phosphatase 4 regulatory subunit 3B	ENSMUST00000020755.12|Ppp4r3b|ENSMUSG00000020463.16|protein phosphatase 4 regulatory subunit 3B
mm39_v1_chr3_-_68911835_68911879	0.10554860225203888	GGAAUGU	ENSMUST00000107812.8|Ift80|ENSMUSG00000027778.16|intraflagellar transport 80
mm39_v1_chr3_-_146518706_146518768	0.10297299876522155	GGAAUGU	ENSMUST00000102515.10|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr18_+_57487800_57487869	0.10282676265408695	GGAAUGU	ENSMUST00000025490.10|Prrc1|ENSMUSG00000024594.10|proline-rich coiled-coil 1
mm39_v1_chr2_-_91540864_91540927	0.10178262191096053	GGAAUGU	ENSMUST00000028678.9|Atg13|ENSMUSG00000027244.15|autophagy related 13	ENSMUST00000076803.12|Atg13|ENSMUSG00000027244.15|autophagy related 13
mm39_v1_chr11_+_110956980_110957000	0.09951695615465972	GGAAUGU	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr5_-_3852857_3852925	0.09917778273886543	GGAAUGU	ENSMUST00000043551.11|Ankib1|ENSMUSG00000040351.12|ankyrin repeat and IBR domain containing 1
mm39_v1_chr11_-_99383938_99383963	0.09883543412292506	GGAAUGU	ENSMUST00000006969.8|Krt23|ENSMUSG00000006777.8|keratin 23
mm39_v1_chr6_-_100264439_100264461	0.0978528732076256	GGAAUGU	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr5_+_20112500_20112549	0.0967656097459264	GGAAUGU	ENSMUST00000101558.10|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr13_+_16189041_16189060	0.09494219876947428	GGAAUGU	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
mm39_v1_chr8_+_79235946_79236030	0.0926658757071473	GGAAUGU	ENSMUST00000209490.2|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	ENSMUST00000034111.10|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm39_v1_chr8_+_69541298_69541379	0.09031362775104074	GGAAUGU	ENSMUST00000006435.8|Atp6v1b2|ENSMUSG00000006273.15|ATPase, H+ transporting, lysosomal V1 subunit B2
mm39_v1_chr3_-_116456292_116456326	0.09013487506335371	GGAAUGU	ENSMUST00000029570.9|Mfsd14a|ENSMUSG00000089911.5|major facilitator superfamily domain containing 14A
mm39_v1_chrX_+_52001108_52001238	0.0896542431259549	GGAAUGU	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr14_+_5894220_5894254	0.08800270148664698	GGAAUGU	ENSMUST00000063750.8|Rarb|ENSMUSG00000017491.10|retinoic acid receptor, beta
mm39_v1_chr1_+_155034452_155034522	0.08715472016105008	GGAAUGU	ENSMUST00000027743.13|Stx6|ENSMUSG00000026470.15|syntaxin 6	ENSMUST00000195302.6|Stx6|ENSMUSG00000026470.15|syntaxin 6
mm39_v1_chr5_-_108134869_108134951	0.08644488941231589	GGAAUGU	ENSMUST00000145239.2|Dipk1a|ENSMUSG00000029270.11|divergent protein kinase domain 1A	ENSMUST00000031198.11|Dipk1a|ENSMUSG00000029270.11|divergent protein kinase domain 1A
mm39_v1_chr11_+_75239259_75239386	0.0850022994227896	GGAAUGU	ENSMUST00000044530.3|Smyd4|ENSMUSG00000018809.3|SET and MYND domain containing 4
mm39_v1_chr6_-_119825081_119825129	0.08368507036749939	GGAAUGU	ENSMUST00000183703.8|Erc1|ENSMUSG00000030172.16|ELKS/RAB6-interacting/CAST family member 1	ENSMUST00000183911.8|Erc1|ENSMUSG00000030172.16|ELKS/RAB6-interacting/CAST family member 1
mm39_v1_chr16_+_17051423_17051528	0.08344154877471557	GGAAUGU	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr15_+_103148824_103148921	0.08313654753899465	GGAAUGU	ENSMUST00000036004.16|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000087351.9|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000231141.2|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1
mm39_v1_chr6_+_56691875_56691937	0.07877638851204712	GGAAUGU	ENSMUST00000031805.11|Avl9|ENSMUSG00000029787.11|AVL9 cell migration associated	ENSMUST00000177249.3|Avl9|ENSMUSG00000029787.11|AVL9 cell migration associated
mm39_v1_chr11_+_97690391_97690423	0.07833481346539768	GGAAUGU	ENSMUST00000043843.12|Lasp1|ENSMUSG00000038366.16|LIM and SH3 protein 1
mm39_v1_chr3_-_107667499_107667572	0.07723391867778441	GGAAUGU	ENSMUST00000153114.2|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)	ENSMUST00000118593.8|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)	ENSMUST00000120243.8|Csf1|ENSMUSG00000014599.11|colony stimulating factor 1 (macrophage)
mm39_v1_chr4_+_86792633_86792676	0.07620220696622432	GGAAUGU	ENSMUST00000045224.14|Acer2|ENSMUSG00000038007.15|alkaline ceramidase 2	ENSMUST00000084433.5|Acer2|ENSMUSG00000038007.15|alkaline ceramidase 2
mm39_v1_chr17_+_74702601_74702634	0.07255720095159099	GGAAUGU	ENSMUST00000024870.9|Slc30a6|ENSMUSG00000024069.15|solute carrier family 30 (zinc transporter), member 6	ENSMUST00000179074.9|Slc30a6|ENSMUSG00000024069.15|solute carrier family 30 (zinc transporter), member 6	ENSMUST00000233799.2|Slc30a6|ENSMUSG00000024069.15|solute carrier family 30 (zinc transporter), member 6	ENSMUST00000233042.2|Slc30a6|ENSMUSG00000024069.15|solute carrier family 30 (zinc transporter), member 6
mm39_v1_chrX_+_41238193_41238289	0.07045756981207311	GGAAUGU	ENSMUST00000115073.9|Stag2|ENSMUSG00000025862.15|stromal antigen 2	ENSMUST00000115072.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr8_+_110595216_110595243	0.07007857709710823	GGAAUGU	ENSMUST00000179721.8|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2	ENSMUST00000034175.5|Phlpp2|ENSMUSG00000031732.13|PH domain and leucine rich repeat protein phosphatase 2
mm39_v1_chr2_-_32602740_32602801	0.06974709492508795	GGAAUGU	ENSMUST00000009699.16|Cdk9|ENSMUSG00000009555.17|cyclin-dependent kinase 9 (CDC2-related kinase)
mm39_v1_chr9_-_106666329_106666408	0.06902522361108941	GGAAUGU	ENSMUST00000046502.7|Rad54l2|ENSMUSG00000040661.7|RAD54 like 2 (S. cerevisiae)
mm39_v1_chr1_-_46893206_46893240	0.06739071598722082	GGAAUGU	ENSMUST00000027131.6|Slc39a10|ENSMUSG00000025986.7|solute carrier family 39 (zinc transporter), member 10
mm39_v1_chr6_-_13839914_13839941	0.06706265713536413	GGAAUGU	ENSMUST00000060442.14|Gpr85|ENSMUSG00000048216.14|G protein-coupled receptor 85
mm39_v1_chr10_-_122912272_122912410	0.06668511223773242	GGAAUGU	ENSMUST00000219203.2|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking	ENSMUST00000073792.11|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking
mm39_v1_chrX_+_149981074_149981136	0.06666751102172082	GGAAUGU	ENSMUST00000184730.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000184392.8|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3	ENSMUST00000096285.5|Wnk3|ENSMUSG00000041245.14|WNK lysine deficient protein kinase 3
mm39_v1_chrX_-_103244784_103244810	0.0642257123165906	GGAAUGU	ENSMUST00000118314.8|Nexmif|ENSMUSG00000046449.16|neurite extension and migration factor
mm39_v1_chr16_+_38167352_38167412	0.06350113907702322	GGAAUGU	ENSMUST00000050273.9|Cox17|ENSMUSG00000046516.11|cytochrome c oxidase assembly protein 17, copper chaperone	ENSMUST00000120495.2|Cox17|ENSMUSG00000046516.11|cytochrome c oxidase assembly protein 17, copper chaperone	ENSMUST00000119704.2|Gm21987|ENSMUSG00000095464.2|predicted gene 21987
mm39_v1_chr2_-_180883813_180883836	0.06270529518922771	GGAAUGU	ENSMUST00000094203.11|Helz2|ENSMUSG00000027580.18|helicase with zinc finger 2, transcriptional coactivator	ENSMUST00000108831.8|Helz2|ENSMUSG00000027580.18|helicase with zinc finger 2, transcriptional coactivator
mm39_v1_chr6_-_88495835_88495887	0.06257320443119788	GGAAUGU	ENSMUST00000032168.7|Sec61a1|ENSMUSG00000030082.15|Sec61 alpha 1 subunit (S. cerevisiae)
mm39_v1_chr17_+_83658354_83658453	0.0619031956460124	GGAAUGU	ENSMUST00000096766.12|Eml4|ENSMUSG00000032624.17|echinoderm microtubule associated protein like 4	ENSMUST00000049503.10|Eml4|ENSMUSG00000032624.17|echinoderm microtubule associated protein like 4	ENSMUST00000112363.10|Eml4|ENSMUSG00000032624.17|echinoderm microtubule associated protein like 4	ENSMUST00000234460.2|Eml4|ENSMUSG00000032624.17|echinoderm microtubule associated protein like 4
mm39_v1_chr4_-_94444975_94445040	0.061057310011303496	GGAAUGU	ENSMUST00000030313.9|Caap1|ENSMUSG00000028578.9|caspase activity and apoptosis inhibitor 1
mm39_v1_chr5_-_38719025_38719149	0.05951775788286543	GGAAUGU	ENSMUST00000005234.13|Wdr1|ENSMUSG00000005103.13|WD repeat domain 1
mm39_v1_chr6_-_87788753_87788784	0.05893585128155276	GGAAUGU	ENSMUST00000078647.11|Rab43|ENSMUSG00000030055.17|RAB43, member RAS oncogene family	ENSMUST00000032135.6|Rab43|ENSMUSG00000030055.17|RAB43, member RAS oncogene family
mm39_v1_chrX_+_93768175_93768175	0.058371059036798977	GGAAUGU	ENSMUST00000101388.4|Zxdb|ENSMUSG00000073062.4|zinc finger, X-linked, duplicated B
mm39_v1_chr6_+_125044876_125044905	0.05753645044924888	GGAAUGU	ENSMUST00000088292.7|Lpar5|ENSMUSG00000067714.14|lysophosphatidic acid receptor 5
mm39_v1_chr7_-_81104423_81104512	0.05143015521972154	GGAAUGU	ENSMUST00000178892.3|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1	ENSMUST00000098331.10|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1
mm39_v1_chr4_-_135161044_135161180	0.05078946354040681	GGAAUGU	ENSMUST00000156635.2|Rcan3|ENSMUSG00000059713.13|regulator of calcineurin 3	ENSMUST00000030606.14|Rcan3|ENSMUSG00000059713.13|regulator of calcineurin 3
mm39_v1_chr5_-_115272964_115273034	0.050607883511800136	GGAAUGU	ENSMUST00000060798.6|Unc119b|ENSMUSG00000046562.6|unc-119 lipid binding chaperone B
mm39_v1_chr6_-_34153955_34154046	0.0502010821224333	GGAAUGU	ENSMUST00000019143.9|Slc35b4|ENSMUSG00000018999.15|solute carrier family 35, member B4
mm39_v1_chr3_-_32419609_32419840	0.05008090319758201	GGAAUGU	ENSMUST00000139660.2|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3	ENSMUST00000168566.3|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3	ENSMUST00000029199.11|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3
mm39_v1_chr1_-_40829801_40829850	0.04886162690659514	GGAAUGU	ENSMUST00000039672.6|Mfsd9|ENSMUSG00000041945.13|major facilitator superfamily domain containing 9
mm39_v1_chr7_-_88987917_88988003	0.04855882400033474	GGAAUGU	ENSMUST00000137723.2|Tmem135|ENSMUSG00000039428.12|transmembrane protein 135	ENSMUST00000117852.8|Tmem135|ENSMUSG00000039428.12|transmembrane protein 135	ENSMUST00000041968.11|Tmem135|ENSMUSG00000039428.12|transmembrane protein 135
mm39_v1_chr9_-_96771433_96771527	0.04727457465537535	GGAAUGU	ENSMUST00000112951.9|Pxylp1|ENSMUSG00000043587.16|2-phosphoxylose phosphatase 1	ENSMUST00000126411.8|Pxylp1|ENSMUSG00000043587.16|2-phosphoxylose phosphatase 1	ENSMUST00000078478.8|Pxylp1|ENSMUSG00000043587.16|2-phosphoxylose phosphatase 1	ENSMUST00000119141.8|Pxylp1|ENSMUSG00000043587.16|2-phosphoxylose phosphatase 1	ENSMUST00000120101.8|Pxylp1|ENSMUSG00000043587.16|2-phosphoxylose phosphatase 1
mm39_v1_chr8_-_9821021_9821161	0.047217417998729964	GGAAUGU	ENSMUST00000208933.2|Fam155a|ENSMUSG00000079157.5|family with sequence similarity 155, member A	ENSMUST00000110969.5|Fam155a|ENSMUSG00000079157.5|family with sequence similarity 155, member A
mm39_v1_chr1_-_54233207_54233207	0.04572341888481494	GGAAUGU	ENSMUST00000120904.8|Hecw2|ENSMUSG00000042807.16|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr11_+_119283887_119283926	0.0440861090205286	GGAAUGU	ENSMUST00000093902.12|Rnf213|ENSMUSG00000070327.15|ring finger protein 213	ENSMUST00000131035.10|Rnf213|ENSMUSG00000070327.15|ring finger protein 213
mm39_v1_chr3_+_129974531_129974548	0.04308113803289921	GGAAUGU	ENSMUST00000080335.11|Col25a1|ENSMUSG00000058897.19|collagen, type XXV, alpha 1	ENSMUST00000106353.2|Col25a1|ENSMUSG00000058897.19|collagen, type XXV, alpha 1
mm39_v1_chr10_+_87695117_87695128	0.042986465179039625	GGAAUGU	ENSMUST00000105300.9|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr16_-_3690243_3690275	0.038977687659123815	GGAAUGU	ENSMUST00000090522.5|Zfp597|ENSMUSG00000039789.8|zinc finger protein 597
mm39_v1_chr10_-_8394546_8394616	0.03865384668601559	GGAAUGU	ENSMUST00000061601.9|Ust|ENSMUSG00000047712.9|uronyl-2-sulfotransferase
mm39_v1_chr7_+_89779564_89779724	0.03776639021754187	GGAAUGU	ENSMUST00000208742.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein	ENSMUST00000049537.9|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chr7_-_115637970_115637985	0.03731016330178392	GGAAUGU	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr15_+_6737853_6737883	0.03713955119488963	GGAAUGU	ENSMUST00000061656.8|Rictor|ENSMUSG00000050310.10|RPTOR independent companion of MTOR, complex 2
mm39_v1_chr10_+_86136236_86136467	0.0361106626226604	GGAAUGU	ENSMUST00000020234.14|Timp3|ENSMUSG00000020044.14|tissue inhibitor of metalloproteinase 3
mm39_v1_chr4_+_33310306_33310374	0.03587176336611567	GGAAUGU	ENSMUST00000108153.9|Rngtt|ENSMUSG00000028274.18|RNA guanylyltransferase and 5'-phosphatase	ENSMUST00000029942.8|Rngtt|ENSMUSG00000028274.18|RNA guanylyltransferase and 5'-phosphatase
mm39_v1_chr10_+_42637479_42637492	0.03554595933586357	GGAAUGU	ENSMUST00000019937.5|Sec63|ENSMUSG00000019802.14|SEC63-like (S. cerevisiae)
mm39_v1_chr18_+_22478146_22478146	0.033795717318902734	GGAAUGU	ENSMUST00000120223.8|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3	ENSMUST00000097655.4|Asxl3|ENSMUSG00000045215.18|ASXL transcriptional regulator 3
mm39_v1_chrX_-_87159237_87159281	0.03235327590135875	GGAAUGU	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr11_+_93776965_93777045	0.032287648986933	GGAAUGU	ENSMUST00000063718.11|Mbtd1|ENSMUSG00000059474.14|mbt domain containing 1	ENSMUST00000107854.9|Mbtd1|ENSMUSG00000059474.14|mbt domain containing 1
mm39_v1_chr3_-_116217579_116217681	0.032272105024306545	GGAAUGU	ENSMUST00000106491.7|Cdc14a|ENSMUSG00000033502.16|CDC14 cell division cycle 14A	ENSMUST00000090464.7|Cdc14a|ENSMUSG00000033502.16|CDC14 cell division cycle 14A
mm39_v1_chr18_-_82710859_82711058	0.031689683876540545	GGAAUGU	ENSMUST00000182122.8|Zfp236|ENSMUSG00000041258.19|zinc finger protein 236	ENSMUST00000171071.9|Zfp236|ENSMUSG00000041258.19|zinc finger protein 236
mm39_v1_chr9_-_104140099_104140149	0.03117238765083848	GGAAUGU	ENSMUST00000035170.13|Dnajc13|ENSMUSG00000032560.15|DnaJ heat shock protein family (Hsp40) member C13
mm39_v1_chr12_-_14202041_14202070	0.030581305252078417	GGAAUGU	ENSMUST00000020926.8|Lratd1|ENSMUSG00000020607.8|LRAT domain containing 1
mm39_v1_chr2_-_169973076_169973140	0.028267584633486335	GGAAUGU	ENSMUST00000063710.13|Zfp217|ENSMUSG00000052056.15|zinc finger protein 217
mm39_v1_chr5_-_138980690_138980792	0.027978790858632162	GGAAUGU	ENSMUST00000046901.14|Pdgfa|ENSMUSG00000025856.16|platelet derived growth factor, alpha	ENSMUST00000076095.14|Pdgfa|ENSMUSG00000025856.16|platelet derived growth factor, alpha
mm39_v1_chr3_+_105359641_105359688	0.024740238551596468	GGAAUGU	ENSMUST00000098761.10|Kcnd3|ENSMUSG00000040896.17|potassium voltage-gated channel, Shal-related family, member 3
mm39_v1_chr3_+_55689921_55689940	0.024528409065641597	GGAAUGU	ENSMUST00000075422.6|Mab21l1|ENSMUSG00000056947.6|mab-21-like 1
mm39_v1_chr7_+_90739904_90739959	0.02446379843739248	GGAAUGU	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chrX_-_100307592_100307608	0.022483357570452295	GGAAUGU	ENSMUST00000101358.3|Gm614|ENSMUSG00000090141.2|predicted gene 614
mm39_v1_chr15_-_4025190_4025253	0.02062141788059811	GGAAUGU	ENSMUST00000046633.10|AW549877|ENSMUSG00000041935.11|expressed sequence AW549877
mm39_v1_chr3_+_97808506_97808567	0.01860329997627123	GGAAUGU	ENSMUST00000029476.9|Sec22b|ENSMUSG00000027879.10|SEC22 homolog B, vesicle trafficking protein	ENSMUST00000130620.2|Sec22b|ENSMUSG00000027879.10|SEC22 homolog B, vesicle trafficking protein	ENSMUST00000122288.2|Sec22b|ENSMUSG00000027879.10|SEC22 homolog B, vesicle trafficking protein
mm39_v1_chr4_+_101353742_101353845	0.018470866722156074	GGAAUGU	ENSMUST00000154120.9|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6	ENSMUST00000106930.8|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6
mm39_v1_chr11_-_118931731_118931795	0.01726032312499141	GGAAUGU	ENSMUST00000026663.8|Cbx8|ENSMUSG00000025578.10|chromobox 8
mm39_v1_chr17_+_78507669_78507687	0.01614775146823222	GGAAUGU	ENSMUST00000112498.3|Crim1|ENSMUSG00000024074.9|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm39_v1_chr4_-_129121676_129121717	0.01452221500746835	GGAAUGU	ENSMUST00000106051.8|C77080|ENSMUSG00000050390.13|expressed sequence C77080
mm39_v1_chr15_-_93173032_93173060	0.014433473845538383	GGAAUGU	ENSMUST00000057896.5|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000049484.13|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1	ENSMUST00000230063.2|Gxylt1|ENSMUSG00000036197.17|glucoside xylosyltransferase 1
mm39_v1_chr3_-_87081939_87082054	0.013388176228123671	GGAAUGU	ENSMUST00000159976.8|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1	ENSMUST00000107618.9|Kirrel|ENSMUSG00000041734.16|kirre like nephrin family adhesion molecule 1
mm39_v1_chr2_+_157266175_157266243	0.011019598133576187	GGAAUGU	ENSMUST00000029175.14|Src|ENSMUSG00000027646.16|Rous sarcoma oncogene	ENSMUST00000092576.11|Src|ENSMUSG00000027646.16|Rous sarcoma oncogene
mm39_v1_chr4_+_126180585_126180596	0.010648485563665428	GGAAUGU	ENSMUST00000070132.7|Col8a2|ENSMUSG00000056174.9|collagen, type VIII, alpha 2
mm39_v1_chr14_-_48902555_48902572	0.00901321497017912	GGAAUGU	ENSMUST00000118578.9|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr8_+_110505184_110505193	0.008952961032820063	GGAAUGU	ENSMUST00000093157.13|Ap1g1|ENSMUSG00000031731.17|adaptor protein complex AP-1, gamma 1 subunit
mm39_v1_chr18_+_60659257_60659306	0.008265081520785648	GGAAUGU	ENSMUST00000223984.2|Dctn4|ENSMUSG00000024603.9|dynactin 4	ENSMUST00000025505.7|Dctn4|ENSMUSG00000024603.9|dynactin 4	ENSMUST00000223590.2|Dctn4|ENSMUSG00000024603.9|dynactin 4
mm39_v1_chr15_+_102314809_102314833	0.00769352425097329	GGAAUGU	ENSMUST00000001326.7|Sp1|ENSMUSG00000001280.14|trans-acting transcription factor 1
mm39_v1_chr9_+_119723931_119723979	0.007607092886664539	GGAAUGU	ENSMUST00000036561.8|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48	ENSMUST00000217472.2|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48	ENSMUST00000215307.2|Wdr48|ENSMUSG00000032512.8|WD repeat domain 48
mm39_v1_chr8_+_57774010_57774027	0.006567692910754398	GGAAUGU	ENSMUST00000040104.5|Hand2|ENSMUSG00000038193.5|heart and neural crest derivatives expressed 2
mm39_v1_chr7_+_18817767_18817884	0.005182881544095252	GGAAUGU	ENSMUST00000032568.14|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000122999.8|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000108473.10|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000108474.2|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase	ENSMUST00000238982.2|Dmpk|ENSMUSG00000030409.17|dystrophia myotonica-protein kinase
mm39_v1_chr6_+_21985902_21985971	0.004608768351805211	GGAAUGU	ENSMUST00000115383.9|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr10_-_108846816_108846844	0.004578645001881043	GGAAUGU	ENSMUST00000105276.8|Syt1|ENSMUSG00000035864.15|synaptotagmin I	ENSMUST00000064054.14|Syt1|ENSMUSG00000035864.15|synaptotagmin I
mm39_v1_chr6_+_126916919_126916951	0.004310122476486066	GGAAUGU	ENSMUST00000032497.7|D6Wsu163e|ENSMUSG00000030347.7|DNA segment, Chr 6, Wayne State University 163, expressed
mm39_v1_chr14_-_51168260_51168335	0.004163615929678703	GGAAUGU	ENSMUST00000160538.2|Pip4p1|ENSMUSG00000035953.15|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1	ENSMUST00000162957.8|Pip4p1|ENSMUSG00000035953.15|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1	ENSMUST00000161166.8|Pip4p1|ENSMUSG00000035953.15|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1	ENSMUST00000160835.9|Pip4p1|ENSMUSG00000035953.15|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1	ENSMUST00000049312.14|Pip4p1|ENSMUSG00000035953.15|phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
mm39_v1_chr6_+_92793440_92793465	0.003407114058387596	GGAAUGU	ENSMUST00000057977.4|A730049H05Rik|ENSMUSG00000048636.8|RIKEN cDNA A730049H05 gene
mm39_v1_chr19_+_59446804_59446883	0.0032834394150821067	GGAAUGU	ENSMUST00000062216.4|Emx2|ENSMUSG00000043969.5|empty spiracles homeobox 2
mm39_v1_chr5_+_119808890_119808927	0.002665444928780501	GGAAUGU	ENSMUST00000121021.8|Tbx3|ENSMUSG00000018604.19|T-box 3
mm39_v1_chr5_+_32768515_32768589	0.0022011387057069105	GGAAUGU	ENSMUST00000202543.4|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase	ENSMUST00000072311.13|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase
mm39_v1_chr1_+_164624200_164624218	0.001736456690460723	GGAAUGU	ENSMUST00000027861.6|Dpt|ENSMUSG00000026574.6|dermatopontin
mm39_v1_chr3_-_19365431_19365486	0.001473569233905169	GGAAUGU	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr8_+_96078886_96078957	0.0010676764920099211	GGAAUGU	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr4_+_155648157_155648200	0.000887978383305714	GGAAUGU	ENSMUST00000105613.10|Nadk|ENSMUSG00000029063.17|NAD kinase
mm39_v1_chr3_+_8574420_8574620	0.0004694816604905174	GGAAUGU	ENSMUST00000029002.9|Stmn2|ENSMUSG00000027500.11|stathmin-like 2
