mm39_v1_chr8_+_109441276_109441276	0.25007876270416296	GUCAGUU	ENSMUST00000043896.10|Zfhx3|ENSMUSG00000038872.11|zinc finger homeobox 3
mm39_v1_chr2_-_73216743_73216916	0.2455665272984141	GUCAGUU	ENSMUST00000112044.8|Gpr155|ENSMUSG00000041762.17|G protein-coupled receptor 155	ENSMUST00000112043.8|Gpr155|ENSMUSG00000041762.17|G protein-coupled receptor 155	ENSMUST00000076463.12|Gpr155|ENSMUSG00000041762.17|G protein-coupled receptor 155
mm39_v1_chr6_-_149003171_149003184	0.21070954920293247	GUCAGUU	ENSMUST00000111557.8|Dennd5b|ENSMUSG00000030313.16|DENN/MADD domain containing 5B
mm39_v1_chr7_-_98305737_98305808	0.20648647786952334	GUCAGUU	ENSMUST00000205911.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000038359.6|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000206611.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor	ENSMUST00000206619.2|Emsy|ENSMUSG00000035401.10|EMSY, BRCA2-interacting transcriptional repressor
mm39_v1_chrX_+_105070907_105070929	0.18540212210855428	GUCAGUU	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr2_+_28095660_28095684	0.17790292977323968	GUCAGUU	ENSMUST00000102879.4|Olfm1|ENSMUSG00000026833.19|olfactomedin 1	ENSMUST00000028177.11|Olfm1|ENSMUSG00000026833.19|olfactomedin 1
mm39_v1_chr6_-_38853097_38853167	0.1697576989679959	GUCAGUU	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr9_+_109760528_109760554	0.15607232181808084	GUCAGUU	ENSMUST00000035055.15|Map4|ENSMUSG00000032479.16|microtubule-associated protein 4
mm39_v1_chr16_+_14523696_14523722	0.1519878249611172	GUCAGUU	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr13_+_23947641_23947657	0.1441350952920311	GUCAGUU	ENSMUST00000055770.4|H1f1|ENSMUSG00000049539.4|H1.1 linker histone, cluster member
mm39_v1_chr1_-_165830160_165830182	0.1302582703589103	GUCAGUU	ENSMUST00000111429.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000176800.2|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000177358.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr4_-_132149780_132149808	0.12548539930413555	GUCAGUU	ENSMUST00000102568.10|Phactr4|ENSMUSG00000066043.14|phosphatase and actin regulator 4
mm39_v1_chr8_-_116434517_116434533	0.12475204352847521	GUCAGUU	ENSMUST00000109104.2|Maf|ENSMUSG00000055435.7|avian musculoaponeurotic fibrosarcoma oncogene homolog
mm39_v1_chr11_+_68979332_68979380	0.12343568392545186	GUCAGUU	ENSMUST00000117780.2|Vamp2|ENSMUSG00000020894.17|vesicle-associated membrane protein 2
mm39_v1_chr11_-_86574586_86574673	0.12266040996829895	GUCAGUU	ENSMUST00000018315.10|Vmp1|ENSMUSG00000018171.10|vacuole membrane protein 1
mm39_v1_chr7_-_105282751_105282807	0.12256212724306535	GUCAGUU	ENSMUST00000057525.14|Trim3|ENSMUSG00000036989.17|tripartite motif-containing 3
mm39_v1_chr6_+_65648574_65648602	0.12078900104039385	GUCAGUU	ENSMUST00000054351.6|Ndnf|ENSMUSG00000049001.6|neuron-derived neurotrophic factor
mm39_v1_chr7_-_136916123_136916174	0.1185874800018863	GUCAGUU	ENSMUST00000106118.10|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000168203.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000169486.9|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000033378.13|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chr9_+_21458138_21458237	0.11777642723700525	GUCAGUU	ENSMUST00000034703.15|Carm1|ENSMUSG00000032185.16|coactivator-associated arginine methyltransferase 1	ENSMUST00000115395.10|Carm1|ENSMUSG00000032185.16|coactivator-associated arginine methyltransferase 1	ENSMUST00000115394.8|Carm1|ENSMUSG00000032185.16|coactivator-associated arginine methyltransferase 1
mm39_v1_chr18_+_42644552_42644586	0.11552511760230125	GUCAGUU	ENSMUST00000237602.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000236088.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000025375.15|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr1_+_136059101_136059142	0.11509789777695677	GUCAGUU	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr3_-_119576911_119577037	0.11484149777497879	GUCAGUU	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr5_-_25703700_25703841	0.11434657121402395	GUCAGUU	ENSMUST00000173073.8|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000045291.14|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C	ENSMUST00000173174.2|Kmt2c|ENSMUSG00000038056.16|lysine (K)-specific methyltransferase 2C
mm39_v1_chr12_-_31763859_31763946	0.11212107213079585	GUCAGUU	ENSMUST00000057783.6|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000236002.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000174480.3|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000176710.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22
mm39_v1_chr8_+_23349543_23349570	0.10871657044145316	GUCAGUU	ENSMUST00000238975.2|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000110696.8|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A	ENSMUST00000044331.7|Kat6a|ENSMUSG00000031540.15|K(lysine) acetyltransferase 6A
mm39_v1_chr10_+_52566616_52566651	0.10497691815900817	GUCAGUU	ENSMUST00000105473.3|Slc35f1|ENSMUSG00000038602.8|solute carrier family 35, member F1
mm39_v1_chr7_-_29979758_29979851	0.10326246537291192	GUCAGUU	ENSMUST00000108190.8|Wdr62|ENSMUSG00000037020.17|WD repeat domain 62
mm39_v1_chr5_-_90514360_90514469	0.10163509280979513	GUCAGUU	ENSMUST00000168058.7|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17	ENSMUST00000014421.15|Ankrd17|ENSMUSG00000055204.16|ankyrin repeat domain 17
mm39_v1_chr1_+_160733942_160734030	0.10033652575365244	GUCAGUU	ENSMUST00000161609.8|Rc3h1|ENSMUSG00000040423.12|RING CCCH (C3H) domains 1
mm39_v1_chr8_+_108020092_108020118	0.09978361733549267	GUCAGUU	ENSMUST00000169453.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr13_-_103911092_103911139	0.09826692356962749	GUCAGUU	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr14_+_75253453_75253514	0.09551780946284374	GUCAGUU	ENSMUST00000036072.8|Rubcnl|ENSMUSG00000034959.9|RUN and cysteine rich domain containing beclin 1 interacting protein like
mm39_v1_chr14_+_26300693_26300767	0.09216925344580103	GUCAGUU	ENSMUST00000203874.3|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A	ENSMUST00000037585.9|Dennd6a|ENSMUSG00000040818.11|DENN/MADD domain containing 6A
mm39_v1_chr2_-_153083322_153083346	0.08934769196340346	GUCAGUU	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr16_+_32882882_32882919	0.08711345189407266	GUCAGUU	ENSMUST00000023497.3|Lmln|ENSMUSG00000022802.3|leishmanolysin-like (metallopeptidase M8 family)
mm39_v1_chr6_-_24664959_24665039	0.08548875551946501	GUCAGUU	ENSMUST00000041737.8|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor	ENSMUST00000031695.15|Wasl|ENSMUSG00000029684.15|WASP like actin nucleation promoting factor
mm39_v1_chr1_+_37338964_37339022	0.08337104040384505	GUCAGUU	ENSMUST00000027287.11|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I	ENSMUST00000140264.8|Inpp4a|ENSMUSG00000026113.18|inositol polyphosphate-4-phosphatase, type I
mm39_v1_chr19_-_7083094_7083094	0.08287620136574696	GUCAGUU	ENSMUST00000113383.4|Flrt1|ENSMUSG00000047787.9|fibronectin leucine rich transmembrane protein 1
mm39_v1_chr2_+_119727689_119727786	0.08256728591866636	GUCAGUU	ENSMUST00000046717.13|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000079934.12|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110774.8|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110773.9|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000156510.2|Mga|ENSMUSG00000033943.16|MAX gene associated
mm39_v1_chr17_-_43187280_43187368	0.08043313880439619	GUCAGUU	ENSMUST00000024709.9|Cd2ap|ENSMUSG00000061665.8|CD2-associated protein	ENSMUST00000233476.2|Cd2ap|ENSMUSG00000061665.8|CD2-associated protein
mm39_v1_chr1_-_156767123_156767186	0.07884136900470264	GUCAGUU	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr9_-_101128976_101129003	0.07098219390092221	GUCAGUU	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr15_+_80595486_80595541	0.0704170270822919	GUCAGUU	ENSMUST00000067689.9|Tnrc6b|ENSMUSG00000047888.11|trinucleotide repeat containing 6b
mm39_v1_chrX_+_80114242_80114346	0.06948152696803152	GUCAGUU	ENSMUST00000171953.8|Tmem47|ENSMUSG00000025666.17|transmembrane protein 47	ENSMUST00000026760.3|Tmem47|ENSMUSG00000025666.17|transmembrane protein 47
mm39_v1_chr2_-_38955452_38955513	0.06878469840592717	GUCAGUU	ENSMUST00000112850.9|Golga1|ENSMUSG00000026754.17|golgi autoantigen, golgin subfamily a, 1
mm39_v1_chr7_+_100355798_100355909	0.06798821921870608	GUCAGUU	ENSMUST00000107042.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000207564.2|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A	ENSMUST00000049053.9|Fam168a|ENSMUSG00000029461.18|family with sequence similarity 168, member A
mm39_v1_chr5_-_107437427_107437514	0.06649889569582004	GUCAGUU	ENSMUST00000031224.15|Tgfbr3|ENSMUSG00000029287.15|transforming growth factor, beta receptor III
mm39_v1_chr5_-_34093678_34093757	0.06590226868431867	GUCAGUU	ENSMUST00000030993.8|Nelfa|ENSMUSG00000029111.8|negative elongation factor complex member A, Whsc2
mm39_v1_chr4_-_126323291_126323349	0.06365632085364	GUCAGUU	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr11_+_68582731_68582741	0.06298391517339323	GUCAGUU	ENSMUST00000102611.10|Myh10|ENSMUSG00000020900.16|myosin, heavy polypeptide 10, non-muscle
mm39_v1_chr13_-_93636224_93636333	0.06128191112956676	GUCAGUU	ENSMUST00000220513.2|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein	ENSMUST00000065537.9|Jmy|ENSMUSG00000021690.11|junction-mediating and regulatory protein
mm39_v1_chr13_+_110039620_110039645	0.060745696074657685	GUCAGUU	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr11_+_59433508_59433553	0.05937966330756634	GUCAGUU	ENSMUST00000101148.9|Nlrp3|ENSMUSG00000032691.15|NLR family, pyrin domain containing 3
mm39_v1_chr2_+_68691778_68691854	0.05790374650480443	GUCAGUU	ENSMUST00000028426.9|Cers6|ENSMUSG00000027035.11|ceramide synthase 6
mm39_v1_chr19_+_55304703_55304799	0.05741063314942527	GUCAGUU	ENSMUST00000225529.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000223690.2|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A	ENSMUST00000095950.3|Vti1a|ENSMUSG00000024983.11|vesicle transport through interaction with t-SNAREs 1A
mm39_v1_chr6_-_83418656_83418666	0.0573715003201266	GUCAGUU	ENSMUST00000089622.11|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr9_+_62765362_62765420	0.055664117256169335	GUCAGUU	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr9_+_65816206_65816302	0.055369098544513426	GUCAGUU	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr19_+_37423198_37423272	0.05466046216946192	GUCAGUU	ENSMUST00000025944.9|Hhex|ENSMUSG00000024986.13|hematopoietically expressed homeobox
mm39_v1_chr6_-_39354570_39354612	0.05315441180399193	GUCAGUU	ENSMUST00000200771.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202204.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202952.2|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202400.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000200969.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000202749.4|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	ENSMUST00000090243.8|Slc37a3|ENSMUSG00000029924.13|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm39_v1_chr13_+_47196975_47197067	0.05183757818876995	GUCAGUU	ENSMUST00000037025.16|Kdm1b|ENSMUSG00000038080.18|lysine (K)-specific demethylase 1B	ENSMUST00000143868.2|Kdm1b|ENSMUSG00000038080.18|lysine (K)-specific demethylase 1B
mm39_v1_chr17_+_3165232_3165257	0.049956644694931426	GUCAGUU	ENSMUST00000076734.8|Scaf8|ENSMUSG00000046201.10|SR-related CTD-associated factor 8
mm39_v1_chrX_-_20816841_20816852	0.049673698702258705	GUCAGUU	ENSMUST00000009550.14|Elk1|ENSMUSG00000009406.14|ELK1, member of ETS oncogene family
mm39_v1_chr11_-_61745843_61745899	0.04953024434652303	GUCAGUU	ENSMUST00000004920.4|Ulk2|ENSMUSG00000004798.15|unc-51 like kinase 2
mm39_v1_chr19_+_41471067_41471128	0.04409599343435055	GUCAGUU	ENSMUST00000067795.13|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr2_-_160208977_160208993	0.04404241774871896	GUCAGUU	ENSMUST00000099126.5|Mafb|ENSMUSG00000074622.5|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm39_v1_chr5_+_150597204_150597269	0.043183231881617185	GUCAGUU	ENSMUST00000202170.4|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B	ENSMUST00000016569.11|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B
mm39_v1_chr8_+_45388466_45388484	0.043141764630354046	GUCAGUU	ENSMUST00000191428.7|Fat1|ENSMUSG00000070047.15|FAT atypical cadherin 1
mm39_v1_chr6_-_35516700_35516823	0.04270035776850955	GUCAGUU	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr3_-_113423774_113423798	0.04230444235367301	GUCAGUU	ENSMUST00000092154.10|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3	ENSMUST00000106536.8|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3	ENSMUST00000106535.2|Rnpc3|ENSMUSG00000027981.15|RNA-binding region (RNP1, RRM) containing 3
mm39_v1_chr1_+_127701901_127701975	0.041366953805623635	GUCAGUU	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr11_-_86435579_86435631	0.0410893412971694	GUCAGUU	ENSMUST00000138810.3|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000058286.9|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1	ENSMUST00000154617.8|Rps6kb1|ENSMUSG00000020516.16|ribosomal protein S6 kinase, polypeptide 1
mm39_v1_chr6_+_31375670_31375795	0.040949384389251	GUCAGUU	ENSMUST00000026699.15|Mkln1|ENSMUSG00000025609.16|muskelin 1, intracellular mediator containing kelch motifs
mm39_v1_chr10_+_98750978_98751034	0.038545666636482165	GUCAGUU	ENSMUST00000020107.8|Atp2b1|ENSMUSG00000019943.11|ATPase, Ca++ transporting, plasma membrane 1
mm39_v1_chr17_-_35178208_35178214	0.03794547333557833	GUCAGUU	ENSMUST00000172753.2|Hspa1b|ENSMUSG00000090877.4|heat shock protein 1B
mm39_v1_chr11_-_106811507_106811599	0.03783849507762919	GUCAGUU	ENSMUST00000103067.10|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chr6_+_126992549_126992549	0.035779266522481826	GUCAGUU	ENSMUST00000000187.7|Fgf6|ENSMUSG00000000183.7|fibroblast growth factor 6
mm39_v1_chr5_-_136596299_136596390	0.0356244340068608	GUCAGUU	ENSMUST00000004097.16|Cux1|ENSMUSG00000029705.18|cut-like homeobox 1
mm39_v1_chr10_-_42152684_42152759	0.03535829334236145	GUCAGUU	ENSMUST00000175881.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000056974.4|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105502.8|Foxo3|ENSMUSG00000048756.12|forkhead box O3	ENSMUST00000105501.2|Foxo3|ENSMUSG00000048756.12|forkhead box O3
mm39_v1_chr1_-_87936242_87936278	0.0345034383944225	GUCAGUU	ENSMUST00000187758.7|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40	ENSMUST00000040783.11|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40
mm39_v1_chr16_-_58343789_58343883	0.031248763442274213	GUCAGUU	ENSMUST00000137035.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	ENSMUST00000149456.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr17_+_48607405_48607424	0.030505751894379617	GUCAGUU	ENSMUST00000170941.3|Treml2|ENSMUSG00000071068.8|triggering receptor expressed on myeloid cells-like 2
mm39_v1_chr4_-_133480922_133480977	0.02856424892278261	GUCAGUU	ENSMUST00000145664.9|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)	ENSMUST00000105897.10|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)
mm39_v1_chr7_-_116042674_116042698	0.028534557384248975	GUCAGUU	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr1_+_105591595_105591648	0.028206020305537514	GUCAGUU	ENSMUST00000039173.13|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	ENSMUST00000086721.10|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing	ENSMUST00000190501.7|Relch|ENSMUSG00000026319.14|RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
mm39_v1_chr17_+_29020064_29020108	0.026881405273825307	GUCAGUU	ENSMUST00000004985.11|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chrX_+_150127171_150127237	0.026354344796241238	GUCAGUU	ENSMUST00000073364.6|Fam120c|ENSMUSG00000025262.9|family with sequence similarity 120, member C
mm39_v1_chr5_+_93241287_93241310	0.025961391176506914	GUCAGUU	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chr11_+_53410552_53410627	0.025386544759232337	GUCAGUU	ENSMUST00000108987.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000121334.8|Septin8|ENSMUSG00000018398.19|septin 8	ENSMUST00000117061.8|Septin8|ENSMUSG00000018398.19|septin 8
mm39_v1_chr6_-_112924205_112924239	0.024851296797084116	GUCAGUU	ENSMUST00000088373.11|Srgap3|ENSMUSG00000030257.17|SLIT-ROBO Rho GTPase activating protein 3
mm39_v1_chr8_-_112603292_112603382	0.024094126868007854	GUCAGUU	ENSMUST00000034431.3|Tmem170|ENSMUSG00000031953.3|transmembrane protein 170
mm39_v1_chr19_-_37184692_37184907	0.023688402551315824	GUCAGUU	ENSMUST00000132580.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000079754.11|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000136286.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126188.8|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3	ENSMUST00000126781.2|Cpeb3|ENSMUSG00000039652.17|cytoplasmic polyadenylation element binding protein 3
mm39_v1_chr19_+_46587523_46587617	0.023663231267803307	GUCAGUU	ENSMUST00000138302.9|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like	ENSMUST00000099376.11|Wbp1l|ENSMUSG00000047731.18|WW domain binding protein 1 like
mm39_v1_chr2_+_6327431_6327478	0.02323269270527268	GUCAGUU	ENSMUST00000114937.8|Usp6nl|ENSMUSG00000039046.16|USP6 N-terminal like
mm39_v1_chr11_+_44409775_44409827	0.021265604730860428	GUCAGUU	ENSMUST00000019333.10|Rnf145|ENSMUSG00000019189.14|ring finger protein 145
mm39_v1_chr17_+_78507669_78507687	0.02043696840664546	GUCAGUU	ENSMUST00000112498.3|Crim1|ENSMUSG00000024074.9|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm39_v1_chr2_+_90770742_90770888	0.019616471886431203	GUCAGUU	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr5_+_89034666_89034684	0.018987114903043747	GUCAGUU	ENSMUST00000148750.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr8_+_57004125_57004197	0.016931430401205417	GUCAGUU	ENSMUST00000110322.9|Fbxo8|ENSMUSG00000038206.14|F-box protein 8	ENSMUST00000040218.13|Fbxo8|ENSMUSG00000038206.14|F-box protein 8	ENSMUST00000210863.2|Fbxo8|ENSMUSG00000038206.14|F-box protein 8
mm39_v1_chr1_+_106099482_106099598	0.016200915272947734	GUCAGUU	ENSMUST00000061047.7|Phlpp1|ENSMUSG00000044340.8|PH domain and leucine rich repeat protein phosphatase 1
mm39_v1_chr12_+_79075924_79076002	0.015874583705352618	GUCAGUU	ENSMUST00000039928.7|Plekhh1|ENSMUSG00000060716.8|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm39_v1_chr4_+_17853452_17853474	0.015495238043881364	GUCAGUU	ENSMUST00000029881.10|Mmp16|ENSMUSG00000028226.16|matrix metallopeptidase 16
mm39_v1_chr15_+_99599978_99600010	0.015429898291007077	GUCAGUU	ENSMUST00000023759.6|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr12_+_65083093_65083132	0.014905394511178222	GUCAGUU	ENSMUST00000120580.8|Prpf39|ENSMUSG00000035597.20|pre-mRNA processing factor 39
mm39_v1_chr18_+_74575567_74575608	0.014899912066282816	GUCAGUU	ENSMUST00000074157.13|Myo5b|ENSMUSG00000025885.19|myosin VB
mm39_v1_chr14_+_60872167_60872226	0.014121966141130409	GUCAGUU	ENSMUST00000022566.14|Spata13|ENSMUSG00000021990.17|spermatogenesis associated 13	ENSMUST00000159729.2|Spata13|ENSMUSG00000021990.17|spermatogenesis associated 13
mm39_v1_chr17_+_27192135_27192193	0.013766193518738454	GUCAGUU	ENSMUST00000120016.3|Zbtb9|ENSMUSG00000079605.6|zinc finger and BTB domain containing 9
mm39_v1_chr1_-_134883645_134883693	0.013495425807739912	GUCAGUU	ENSMUST00000045665.13|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B	ENSMUST00000086444.6|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B	ENSMUST00000112163.2|Ppp1r12b|ENSMUSG00000073557.13|protein phosphatase 1, regulatory subunit 12B
mm39_v1_chr2_+_173501553_173501664	0.012727433105489887	GUCAGUU	ENSMUST00000029024.10|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family	ENSMUST00000109110.4|Rab22a|ENSMUSG00000027519.11|RAB22A, member RAS oncogene family
mm39_v1_chr6_-_24956296_24956296	0.011423069025915299	GUCAGUU	ENSMUST00000127247.4|Tmem229a|ENSMUSG00000048022.12|transmembrane protein 229A
mm39_v1_chr3_+_9315662_9315662	0.009091524985324496	GUCAGUU	ENSMUST00000155203.2|Zbtb10|ENSMUSG00000069114.9|zinc finger and BTB domain containing 10
mm39_v1_chr11_-_88609048_88609136	0.008470025037808755	GUCAGUU	ENSMUST00000107909.8|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr18_+_34464185_34464251	0.00846640241589191	GUCAGUU	ENSMUST00000072576.10|Srp19|ENSMUSG00000014504.17|signal recognition particle 19	ENSMUST00000119329.8|Srp19|ENSMUSG00000014504.17|signal recognition particle 19
mm39_v1_chr11_+_32297803_32297865	0.007800803925155924	GUCAGUU	ENSMUST00000038753.6|Sh3pxd2b|ENSMUSG00000040711.9|SH3 and PX domains 2B	ENSMUST00000239041.2|Sh3pxd2b|ENSMUSG00000040711.9|SH3 and PX domains 2B
mm39_v1_chr10_+_97315465_97315479	0.006143130293921782	GUCAGUU	ENSMUST00000105287.11|Dcn|ENSMUSG00000019929.17|decorin
mm39_v1_chr18_+_5591864_5591902	0.004652479496116316	GUCAGUU	ENSMUST00000025081.13|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1	ENSMUST00000159390.8|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr7_+_83234118_83234300	0.003173057367271217	GUCAGUU	ENSMUST00000039317.14|Tmc3|ENSMUSG00000038540.15|transmembrane channel-like gene family 3	ENSMUST00000164944.2|Tmc3|ENSMUSG00000038540.15|transmembrane channel-like gene family 3
mm39_v1_chr12_+_24881582_24881657	0.0025938591385954463	GUCAGUU	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr15_-_100952206_100952280	0.002482130535229092	GUCAGUU	ENSMUST00000178140.2|Fignl2|ENSMUSG00000095440.3|fidgetin-like 2
mm39_v1_chrX_+_165021897_165021909	0.0020514500694324964	GUCAGUU	ENSMUST00000112235.8|Gpm6b|ENSMUSG00000031342.18|glycoprotein m6b
mm39_v1_chr3_+_60408600_60408663	0.0015229986890989578	GUCAGUU	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr10_-_122912272_122912410	0.0014122240457054007	GUCAGUU	ENSMUST00000219203.2|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking	ENSMUST00000073792.11|Mon2|ENSMUSG00000034602.16|MON2 homolog, regulator of endosome to Golgi trafficking
mm39_v1_chr3_-_92050043_92050073	0.0013984603961950848	GUCAGUU	ENSMUST00000197811.2|4930511M18Rik|ENSMUSG00000104791.2|RIKEN cDNA 4930511M18 gene	ENSMUST00000029535.6|Lelp1|ENSMUSG00000027927.6|late cornified envelope-like proline-rich 1
mm39_v1_chr12_-_83534482_83534504	0.0008289359511872766	GUCAGUU	ENSMUST00000177959.8|Dpf3|ENSMUSG00000021221.16|D4, zinc and double PHD fingers, family 3	ENSMUST00000178756.8|Dpf3|ENSMUSG00000021221.16|D4, zinc and double PHD fingers, family 3
mm39_v1_chr9_-_66826928_66826992	0.0008191893588597763	GUCAGUU	ENSMUST00000041139.9|Rab8b|ENSMUSG00000036943.10|RAB8B, member RAS oncogene family
mm39_v1_chr10_-_25412010_25412165	0.00038994894766968533	GUCAGUU	ENSMUST00000179685.3|Smlr1|ENSMUSG00000096546.3|small leucine-rich protein 1
mm39_v1_chr11_+_109253598_109253695	0.00033896863656153497	GUCAGUU	ENSMUST00000106702.4|Gna13|ENSMUSG00000020611.15|guanine nucleotide binding protein, alpha 13	ENSMUST00000020930.14|Gna13|ENSMUSG00000020611.15|guanine nucleotide binding protein, alpha 13
mm39_v1_chr3_-_57483175_57483257	8.0672384421296e-05	GUCAGUU	ENSMUST00000029380.14|Wwtr1|ENSMUSG00000027803.15|WW domain containing transcription regulator 1
