mm39_v1_chr13_+_94954202_94954242	0.6966973598750675	Hoxa6	ENSMUST00000220825.2|Tbca|ENSMUSG00000042043.7|tubulin cofactor A
mm39_v1_chr9_+_120758282_120758335	0.3265635869622385	Hoxa6	ENSMUST00000130466.8|Ctnnb1|ENSMUSG00000006932.18|catenin (cadherin associated protein), beta 1
mm39_v1_chr13_-_29137673_29137696	0.31158946215653294	Hoxa6	ENSMUST00000067230.6|Sox4|ENSMUSG00000076431.5|SRY (sex determining region Y)-box 4
mm39_v1_chr7_-_108769719_108769764	0.2847829379578727	Hoxa6	ENSMUST00000208136.2|Lmo1|ENSMUSG00000036111.9|LIM domain only 1	ENSMUST00000036992.9|Lmo1|ENSMUSG00000036111.9|LIM domain only 1
mm39_v1_chr17_-_24292453_24292464	0.27868720414455445	Hoxa6	ENSMUST00000017090.6|Kctd5|ENSMUSG00000016946.7|potassium channel tetramerisation domain containing 5
mm39_v1_chr3_+_41517790_41517827	0.24788482395227493	Hoxa6	ENSMUST00000163764.8|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr10_-_35587888_35587888	0.2463152382426806	Hoxa6	ENSMUST00000080898.4|Amd2|ENSMUSG00000063953.4|S-adenosylmethionine decarboxylase 2
mm39_v1_chr7_-_108774367_108774414	0.24128701684784362	Hoxa6	ENSMUST00000207178.2|Lmo1|ENSMUSG00000036111.9|LIM domain only 1
mm39_v1_chr14_+_26722319_26722463	0.23694399565398308	Hoxa6	ENSMUST00000035433.10|Hesx1|ENSMUSG00000040726.11|homeobox gene expressed in ES cells
mm39_v1_chr3_+_41517829_41518042	0.23217630687690308	Hoxa6	ENSMUST00000170711.8|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chrM_+_8603_8615	0.22687594316290677	Hoxa6	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm39_v1_chr10_-_40178182_40178196	0.2063760164044171	Hoxa6	ENSMUST00000099945.6|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1	ENSMUST00000238953.2|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1	ENSMUST00000238969.2|Amd1|ENSMUSG00000075232.7|S-adenosylmethionine decarboxylase 1
mm39_v1_chr10_+_99099084_99099106	0.20471980136244414	Hoxa6	ENSMUST00000020118.5|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6	ENSMUST00000220291.2|Dusp6|ENSMUSG00000019960.9|dual specificity phosphatase 6
mm39_v1_chr18_+_69633741_69634029	0.19994554615043297	Hoxa6	ENSMUST00000207214.2|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201094.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000200703.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202765.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr2_+_132689640_132689661	0.1933940202138585	Hoxa6	ENSMUST00000124836.8|Crls1|ENSMUSG00000027357.17|cardiolipin synthase 1	ENSMUST00000154160.2|Crls1|ENSMUSG00000027357.17|cardiolipin synthase 1
mm39_v1_chr1_-_165762469_165762605	0.19113713671446525	Hoxa6	ENSMUST00000069609.12|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111427.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000111426.11|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr12_-_73093953_73093953	0.1764970073886704	Hoxa6	ENSMUST00000050029.8|Six1|ENSMUSG00000051367.9|sine oculis-related homeobox 1
mm39_v1_chr7_-_112946481_112946501	0.17422927749461448	Hoxa6	ENSMUST00000117577.8|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10
mm39_v1_chr6_-_52203146_52203176	0.15025362794770347	Hoxa6	ENSMUST00000114425.3|Hoxa9|ENSMUSG00000038227.16|homeobox A9
mm39_v1_chr19_-_24178000_24178016	0.14945768799092507	Hoxa6	ENSMUST00000233658.3|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chr4_-_87951565_87951610	0.1492876935738568	Hoxa6	ENSMUST00000078090.12|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr16_-_92196954_92196971	0.14430525261586757	Hoxa6	ENSMUST00000023672.10|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1
mm39_v1_chr13_+_83652352_83652374	0.1403280222906022	Hoxa6	ENSMUST00000198916.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000200123.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000005722.14|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000163888.8|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chrM_+_7758_7775	0.13927476699899843	Hoxa6	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.1|mitochondrially encoded ATP synthase 8
mm39_v1_chr6_+_29859372_29859380	0.13804132007748013	Hoxa6	ENSMUST00000115238.10|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr9_+_72600721_72600884	0.13752879218468128	Hoxa6	ENSMUST00000238315.2|Nedd4|ENSMUSG00000032216.16|neural precursor cell expressed, developmentally down-regulated 4
mm39_v1_chr19_+_26727111_26727277	0.12882131818380244	Hoxa6	ENSMUST00000175842.4|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr9_-_105398346_105398464	0.12368685836981545	Hoxa6	ENSMUST00000176770.8|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering	ENSMUST00000085133.13|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering
mm39_v1_chr3_-_146476331_146476536	0.12238854681835759	Hoxa6	ENSMUST00000106138.8|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr6_-_16898440_16898475	0.12173553006269998	Hoxa6	ENSMUST00000031533.11|Tfec|ENSMUSG00000029553.11|transcription factor EC
mm39_v1_chr3_-_146475974_146476016	0.12032093710249829	Hoxa6	ENSMUST00000106137.8|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr9_+_44309727_44309771	0.1197155697472633	Hoxa6	ENSMUST00000213268.2|Slc37a4|ENSMUSG00000032114.10|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm39_v1_chr5_+_115373895_115373895	0.11877489580443855	Hoxa6	ENSMUST00000081497.13|Pop5|ENSMUSG00000060152.15|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm39_v1_chr11_+_23234644_23234669	0.11312692325379967	Hoxa6	ENSMUST00000150750.3|Xpo1|ENSMUSG00000020290.15|exportin 1
mm39_v1_chr6_-_52181393_52181567	0.11054401548529913	Hoxa6	ENSMUST00000048794.7|Hoxa5|ENSMUSG00000038253.7|homeobox A5
mm39_v1_chr7_-_84328553_84328609	0.10988193139571008	Hoxa6	ENSMUST00000069537.3|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000207865.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000178385.9|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000208782.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6
mm39_v1_chr1_+_177272297_177272308	0.1082181209506177	Hoxa6	ENSMUST00000193440.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr2_-_7400690_7400735	0.1067982566822791	Hoxa6	ENSMUST00000182404.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr16_-_95387444_95387454	0.10162972714559118	Hoxa6	ENSMUST00000233269.2|Erg|ENSMUSG00000040732.21|ETS transcription factor
mm39_v1_chr3_+_84859453_84859493	0.10048543046848663	Hoxa6	ENSMUST00000029727.8|Fbxw7|ENSMUSG00000028086.16|F-box and WD-40 domain protein 7
mm39_v1_chr1_+_177273226_177273387	0.10013318740520653	Hoxa6	ENSMUST00000077225.8|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr11_+_90078485_90078516	0.09910106211099491	Hoxa6	ENSMUST00000124877.3|Gm45716|ENSMUSG00000110344.2|predicted gene 45716	ENSMUST00000153734.2|Gm45716|ENSMUSG00000110344.2|predicted gene 45716	ENSMUST00000134929.8|Gm45716|ENSMUSG00000110344.2|predicted gene 45716
mm39_v1_chr11_+_120123727_120123779	0.094887878913275	Hoxa6	ENSMUST00000122148.8|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1	ENSMUST00000044985.14|Bahcc1|ENSMUSG00000039741.16|BAH domain and coiled-coil containing 1
mm39_v1_chr1_+_177272215_177272235	0.09424245805560447	Hoxa6	ENSMUST00000192851.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18	ENSMUST00000193480.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18	ENSMUST00000195388.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr13_-_103901010_103901090	0.09206583336241246	Hoxa6	ENSMUST00000210489.2|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr5_-_23821523_23821596	0.08857652004489519	Hoxa6	ENSMUST00000088392.9|Srpk2|ENSMUSG00000062604.12|serine/arginine-rich protein specific kinase 2
mm39_v1_chr15_-_8740218_8740248	0.08761304555106018	Hoxa6	ENSMUST00000005493.14|Slc1a3|ENSMUSG00000005360.15|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm39_v1_chr12_-_25147139_25147282	0.07860869817934739	Hoxa6	ENSMUST00000221761.2|Id2|ENSMUSG00000020644.10|inhibitor of DNA binding 2
mm39_v1_chr5_+_38233901_38233917	0.07660999342714593	Hoxa6	ENSMUST00000146864.6|Stx18|ENSMUSG00000029125.15|syntaxin 18
mm39_v1_chr10_+_87926932_87926939	0.07534508660058489	Hoxa6	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr2_+_72128239_72128257	0.07464950255401147	Hoxa6	ENSMUST00000144111.2|Map3k20|ENSMUSG00000004085.15|mitogen-activated protein kinase kinase kinase 20
mm39_v1_chr4_-_82768958_82769051	0.07307386855949745	Hoxa6	ENSMUST00000139401.2|Zdhhc21|ENSMUSG00000028403.16|zinc finger, DHHC domain containing 21
mm39_v1_chr15_-_77037972_77038017	0.07179462188561421	Hoxa6	ENSMUST00000111581.4|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2	ENSMUST00000166610.8|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chrM_+_7779_7927	0.06854563391797035	Hoxa6	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm39_v1_chr12_-_55033113_55033128	0.06823715155632223	Hoxa6	ENSMUST00000038926.13|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A
mm39_v1_chr6_-_52141796_52141816	0.06733585969288	Hoxa6	ENSMUST00000014848.11|Hoxa2|ENSMUSG00000014704.11|homeobox A2
mm39_v1_chr18_-_66155651_66155671	0.06653911226061333	Hoxa6	ENSMUST00000143990.2|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1
mm39_v1_chr4_+_11579648_11579674	0.06555723329989883	Hoxa6	ENSMUST00000180239.2|Fsbp|ENSMUSG00000094595.2|fibrinogen silencer binding protein
mm39_v1_chr17_+_34258411_34258455	0.06281909004177474	Hoxa6	ENSMUST00000087497.11|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000131134.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000235819.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114255.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114252.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000237989.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2
mm39_v1_chr4_+_128582519_128582588	0.061873529254900875	Hoxa6	ENSMUST00000106080.8|Phc2|ENSMUSG00000028796.18|polyhomeotic 2
mm39_v1_chr8_-_68427217_68427248	0.06136640515674326	Hoxa6	ENSMUST00000098696.10|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3	ENSMUST00000038959.16|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3	ENSMUST00000093469.11|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr12_-_55033130_55033314	0.060093632702370885	Hoxa6	ENSMUST00000173433.8|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A	ENSMUST00000173803.2|Gm20403|ENSMUSG00000092233.2|predicted gene 20403
mm39_v1_chr3_+_68479578_68479723	0.06000896948467099	Hoxa6	ENSMUST00000170788.9|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr11_+_93935021_93935064	0.059783617145730966	Hoxa6	ENSMUST00000075695.13|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9	ENSMUST00000092777.11|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr11_+_23256883_23256908	0.05873937536245504	Hoxa6	ENSMUST00000180046.8|Usp34|ENSMUSG00000056342.17|ubiquitin specific peptidase 34
mm39_v1_chr11_+_93935066_93935100	0.05834361912578774	Hoxa6	ENSMUST00000103168.10|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr3_-_37180093_37180110	0.05819612577701843	Hoxa6	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr2_-_6889783_6889807	0.05743553950291577	Hoxa6	ENSMUST00000170438.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114924.10|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000114934.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr4_-_92079986_92079986	0.05681076731353519	Hoxa6	ENSMUST00000123179.2|Gm12666|ENSMUSG00000066107.7|predicted gene 12666
mm39_v1_chr6_-_51443602_51443681	0.05630703737998807	Hoxa6	ENSMUST00000203253.2|Hnrnpa2b1|ENSMUSG00000004980.17|heterogeneous nuclear ribonucleoprotein A2/B1
mm39_v1_chr13_+_44994167_44994206	0.05414151333150132	Hoxa6	ENSMUST00000173906.3|Jarid2|ENSMUSG00000038518.16|jumonji, AT rich interactive domain 2
mm39_v1_chr11_+_23256909_23256937	0.05294862197407015	Hoxa6	ENSMUST00000137823.8|Usp34|ENSMUSG00000056342.17|ubiquitin specific peptidase 34
mm39_v1_chr19_+_26728339_26728367	0.0524095702881183	Hoxa6	ENSMUST00000175953.3|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr16_-_56533179_56533339	0.050967445126870146	Hoxa6	ENSMUST00000136394.8|Tfg|ENSMUSG00000022757.20|Trk-fused gene
mm39_v1_chr5_+_35146727_35146750	0.04978601592111995	Hoxa6	ENSMUST00000114284.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr10_+_18345706_18345729	0.049571233828910155	Hoxa6	ENSMUST00000162891.8|Nhsl1|ENSMUSG00000039835.17|NHS-like 1	ENSMUST00000100054.4|Nhsl1|ENSMUSG00000039835.17|NHS-like 1
mm39_v1_chr12_-_34578842_34578903	0.04556691972348706	Hoxa6	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr5_-_123127148_123127194	0.04554862883574057	Hoxa6	ENSMUST00000046073.16|Kdm2b|ENSMUSG00000029475.18|lysine (K)-specific demethylase 2B
mm39_v1_chr14_-_78866714_78866732	0.04543276445182494	Hoxa6	ENSMUST00000228362.2|Dgkh|ENSMUSG00000034731.12|diacylglycerol kinase, eta	ENSMUST00000227767.2|Dgkh|ENSMUSG00000034731.12|diacylglycerol kinase, eta
mm39_v1_chr11_-_30218167_30218196	0.04310605168053978	Hoxa6	ENSMUST00000006629.14|Sptbn1|ENSMUSG00000020315.19|spectrin beta, non-erythrocytic 1
mm39_v1_chr1_+_6800275_6800341	0.042142650026713274	Hoxa6	ENSMUST00000043578.13|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000139756.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000131467.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000150761.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000151281.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr1_-_13061333_13061401	0.04179072409749384	Hoxa6	ENSMUST00000115403.9|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1	ENSMUST00000136197.8|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1	ENSMUST00000115402.8|Slco5a1|ENSMUSG00000025938.17|solute carrier organic anion transporter family, member 5A1
mm39_v1_chr11_+_93935156_93935191	0.04103505050936651	Hoxa6	ENSMUST00000024979.15|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr11_+_31823096_31823275	0.040027806113675124	Hoxa6	ENSMUST00000155278.2|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr19_+_8861096_8861273	0.03999453472780002	Hoxa6	ENSMUST00000187504.7|Lbhd1|ENSMUSG00000096740.9|LBH domain containing 1
mm39_v1_chr5_+_35146880_35146893	0.03924157057268821	Hoxa6	ENSMUST00000114285.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr4_+_5724305_5724357	0.038753633036812236	Hoxa6	ENSMUST00000108380.2|Fam110b|ENSMUSG00000049119.15|family with sequence similarity 110, member B
mm39_v1_chr8_-_47805383_47805401	0.03844365538350723	Hoxa6	ENSMUST00000110367.10|Stox2|ENSMUSG00000038143.17|storkhead box 2
mm39_v1_chr9_+_118307412_118307519	0.03796610166315509	Hoxa6	ENSMUST00000035020.15|Eomes|ENSMUSG00000032446.15|eomesodermin
mm39_v1_chr4_-_120672900_120672959	0.03785856768608274	Hoxa6	ENSMUST00000120779.8|Nfyc|ENSMUSG00000032897.18|nuclear transcription factor-Y gamma
mm39_v1_chr3_-_137837117_137837142	0.03774985953724016	Hoxa6	ENSMUST00000029805.13|Mttp|ENSMUSG00000028158.15|microsomal triglyceride transfer protein
mm39_v1_chr6_+_29859660_29859684	0.03716972585963156	Hoxa6	ENSMUST00000128927.9|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr10_+_42459772_42459834	0.0371529611126937	Hoxa6	ENSMUST00000105497.8|Ostm1|ENSMUSG00000038280.13|osteopetrosis associated transmembrane protein 1	ENSMUST00000144806.8|Ostm1|ENSMUSG00000038280.13|osteopetrosis associated transmembrane protein 1
mm39_v1_chr10_-_116385007_116385068	0.036725806009167895	Hoxa6	ENSMUST00000164088.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr6_+_29859685_29859709	0.03649199243903563	Hoxa6	ENSMUST00000134438.2|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr7_+_51537645_51537688	0.03520226194650434	Hoxa6	ENSMUST00000208711.2|Gas2|ENSMUSG00000030498.16|growth arrest specific 2
mm39_v1_chr18_+_69652880_69652895	0.034939631125854416	Hoxa6	ENSMUST00000200813.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr2_+_109522781_109522889	0.03466558023893304	Hoxa6	ENSMUST00000111050.10|Bdnf|ENSMUSG00000048482.15|brain derived neurotrophic factor
mm39_v1_chr5_-_134485430_134485653	0.03341136410695365	Hoxa6	ENSMUST00000200944.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000202280.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000074114.12|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100654.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100650.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000111245.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000202554.4|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000073161.12|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000100652.10|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000171794.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1	ENSMUST00000167084.9|Gtf2ird1|ENSMUSG00000023079.15|general transcription factor II I repeat domain-containing 1
mm39_v1_chr11_+_93934940_93934947	0.03312875008196181	Hoxa6	ENSMUST00000132079.8|Spag9|ENSMUSG00000020859.17|sperm associated antigen 9
mm39_v1_chr9_-_71803354_71803393	0.03272691541530044	Hoxa6	ENSMUST00000184448.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chr6_+_106095726_106095967	0.032661739526429874	Hoxa6	ENSMUST00000113258.8|Cntn4|ENSMUSG00000064293.15|contactin 4	ENSMUST00000079416.6|Cntn4|ENSMUSG00000064293.15|contactin 4
mm39_v1_chr18_+_35932894_35933005	0.03139406612652247	Hoxa6	ENSMUST00000236484.2|Ube2d2a|ENSMUSG00000091896.9|ubiquitin-conjugating enzyme E2D 2A	ENSMUST00000235919.2|Gm50371|ENSMUSG00000117841.2|predicted gene, 50371	ENSMUST00000236550.2|Ube2d2a|ENSMUSG00000091896.9|ubiquitin-conjugating enzyme E2D 2A
mm39_v1_chr15_-_77037756_77037812	0.03130371716390557	Hoxa6	ENSMUST00000227314.2|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2	ENSMUST00000227930.2|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2	ENSMUST00000227533.2|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr8_-_68270936_68270977	0.030624534884599274	Hoxa6	ENSMUST00000120071.8|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr2_+_120307390_120307457	0.02973625672221963	Hoxa6	ENSMUST00000110716.9|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000028748.14|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000090028.13|Capn3|ENSMUSG00000079110.13|calpain 3	ENSMUST00000110719.4|Capn3|ENSMUSG00000079110.13|calpain 3
mm39_v1_chr6_-_13839914_13839941	0.02967694240938529	Hoxa6	ENSMUST00000060442.14|Gpr85|ENSMUSG00000048216.14|G protein-coupled receptor 85
mm39_v1_chr2_-_168048795_168048842	0.028817572279317357	Hoxa6	ENSMUST00000057793.11|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr2_+_20742115_20742152	0.02832671642429496	Hoxa6	ENSMUST00000114606.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4	ENSMUST00000114608.3|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr19_-_46033353_46033724	0.027239056532831558	Hoxa6	ENSMUST00000026252.14|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000156585.9|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000185355.7|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1	ENSMUST00000152946.8|Ldb1|ENSMUSG00000025223.16|LIM domain binding 1
mm39_v1_chr12_-_101784727_101784800	0.024980285845652983	Hoxa6	ENSMUST00000222587.2|Fbln5|ENSMUSG00000021186.10|fibulin 5
mm39_v1_chr10_-_6930376_6930397	0.024621982034335087	Hoxa6	ENSMUST00000105617.8|Ipcef1|ENSMUSG00000064065.16|interaction protein for cytohesin exchange factors 1
mm39_v1_chr13_+_83723255_83723329	0.024067420785017817	Hoxa6	ENSMUST00000199167.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000195904.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr2_-_7400780_7400842	0.024055069620449152	Hoxa6	ENSMUST00000002176.13|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr15_+_21111428_21111538	0.023804047933230845	Hoxa6	ENSMUST00000075132.8|Cdh12|ENSMUSG00000040452.10|cadherin 12
mm39_v1_chr9_+_32027335_32027432	0.023439407415021762	Hoxa6	ENSMUST00000174641.8|Arhgap32|ENSMUSG00000041444.15|Rho GTPase activating protein 32
mm39_v1_chr10_+_127256192_127256218	0.023332640565761356	Hoxa6	ENSMUST00000171434.8|R3hdm2|ENSMUSG00000025404.16|R3H domain containing 2
mm39_v1_chr2_+_26481435_26481447	0.023317275281496463	Hoxa6	ENSMUST00000152988.9|Egfl7|ENSMUSG00000026921.21|EGF-like domain 7	ENSMUST00000149789.2|Egfl7|ENSMUSG00000026921.21|EGF-like domain 7
mm39_v1_chr9_-_71070506_71070572	0.022365490040783254	Hoxa6	ENSMUST00000074465.9|Aqp9|ENSMUSG00000032204.14|aquaporin 9
mm39_v1_chr7_-_37472979_37473066	0.022312857673793794	Hoxa6	ENSMUST00000176534.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr14_-_121976273_121976372	0.02195136983277333	Hoxa6	ENSMUST00000212376.3|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9	ENSMUST00000239077.2|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9
mm39_v1_chr18_-_84104507_84104529	0.02181493319298728	Hoxa6	ENSMUST00000060303.10|Tshz1|ENSMUSG00000046982.12|teashirt zinc finger family member 1
mm39_v1_chr6_+_15185399_15185519	0.021589052501231196	Hoxa6	ENSMUST00000115474.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2	ENSMUST00000115472.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2	ENSMUST00000031545.14|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr15_-_77037926_77037954	0.021401617427693545	Hoxa6	ENSMUST00000228087.2|Rbfox2|ENSMUSG00000033565.19|RNA binding protein, fox-1 homolog (C. elegans) 2
mm39_v1_chr15_-_100497863_100497920	0.021035035148686085	Hoxa6	ENSMUST00000073837.13|Pou6f1|ENSMUSG00000009739.18|POU domain, class 6, transcription factor 1
mm39_v1_chr11_+_102495189_102495262	0.020469198788853178	Hoxa6	ENSMUST00000057893.7|Fzd2|ENSMUSG00000050288.7|frizzled class receptor 2
mm39_v1_chr18_-_84104574_84104615	0.02004542950036753	Hoxa6	ENSMUST00000175783.3|Tshz1|ENSMUSG00000046982.12|teashirt zinc finger family member 1
mm39_v1_chr12_+_38833501_38833526	0.019991334767920328	Hoxa6	ENSMUST00000159334.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr16_-_95260104_95260243	0.019872439154856508	Hoxa6	ENSMUST00000176345.10|Erg|ENSMUSG00000040732.21|ETS transcription factor	ENSMUST00000121809.11|Erg|ENSMUSG00000040732.21|ETS transcription factor	ENSMUST00000233664.2|Erg|ENSMUSG00000040732.21|ETS transcription factor	ENSMUST00000122199.10|Erg|ENSMUSG00000040732.21|ETS transcription factor
mm39_v1_chr9_-_40257586_40257634	0.01979433100675654	Hoxa6	ENSMUST00000121357.8|Gramd1b|ENSMUSG00000040111.18|GRAM domain containing 1B
mm39_v1_chr4_-_58499398_58499409	0.019496796524408427	Hoxa6	ENSMUST00000107570.2|Lpar1|ENSMUSG00000038668.15|lysophosphatidic acid receptor 1
mm39_v1_chr9_-_13245834_13245834	0.01943139555265744	Hoxa6	ENSMUST00000110582.4|Jrkl|ENSMUSG00000079083.4|Jrk-like
mm39_v1_chr13_+_16189041_16189060	0.01927154652851543	Hoxa6	ENSMUST00000164993.2|Inhba|ENSMUSG00000041324.15|inhibin beta-A
mm39_v1_chr18_+_42669322_42669358	0.01910251669086588	Hoxa6	ENSMUST00000236418.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr5_+_149601688_149601768	0.018695069254399937	Hoxa6	ENSMUST00000100404.6|B3glct|ENSMUSG00000051950.11|beta-3-glucosyltransferase
mm39_v1_chr15_-_8739893_8739983	0.018599089849740947	Hoxa6	ENSMUST00000157065.2|Slc1a3|ENSMUSG00000005360.15|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm39_v1_chr6_+_15196950_15197041	0.018467080946317316	Hoxa6	ENSMUST00000140557.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2	ENSMUST00000131414.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2	ENSMUST00000115469.8|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr11_+_96214078_96214152	0.018328774560760916	Hoxa6	ENSMUST00000093944.10|Hoxb3|ENSMUSG00000048763.12|homeobox B3
mm39_v1_chr12_+_38833454_38833482	0.01816653685734126	Hoxa6	ENSMUST00000161980.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000160701.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr3_-_9029097_9029161	0.017606881555354774	Hoxa6	ENSMUST00000091354.12|Tpd52|ENSMUSG00000027506.16|tumor protein D52	ENSMUST00000094381.11|Tpd52|ENSMUSG00000027506.16|tumor protein D52
mm39_v1_chr11_-_30148230_30148263	0.017048567492816302	Hoxa6	ENSMUST00000102838.10|Sptbn1|ENSMUSG00000020315.19|spectrin beta, non-erythrocytic 1
mm39_v1_chr18_-_81029986_81029986	0.017019474776244266	Hoxa6	ENSMUST00000057950.9|Sall3|ENSMUSG00000024565.11|spalt like transcription factor 3
mm39_v1_chr4_-_110149916_110149929	0.01619436233104046	Hoxa6	ENSMUST00000106601.8|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4
mm39_v1_chr5_+_90666791_90666815	0.015812101891475066	Hoxa6	ENSMUST00000113179.9|Afm|ENSMUSG00000029369.18|afamin	ENSMUST00000128740.2|Afm|ENSMUSG00000029369.18|afamin
mm39_v1_chr19_-_18978463_18978483	0.014788462624253889	Hoxa6	ENSMUST00000040153.15|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta	ENSMUST00000112828.8|Rorb|ENSMUSG00000036192.16|RAR-related orphan receptor beta
mm39_v1_chr8_+_79755194_79755242	0.01474506001959181	Hoxa6	ENSMUST00000119254.8|Zfp827|ENSMUSG00000071064.16|zinc finger protein 827	ENSMUST00000238669.2|Zfp827|ENSMUSG00000071064.16|zinc finger protein 827
mm39_v1_chr4_-_14621805_14621819	0.014657724225104758	Hoxa6	ENSMUST00000042221.14|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr11_+_116547932_116547943	0.014478563276004998	Hoxa6	ENSMUST00000116318.3|Prcd|ENSMUSG00000075410.14|photoreceptor disc component
mm39_v1_chr2_-_168609110_168609126	0.014219690197021734	Hoxa6	ENSMUST00000029061.12|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4	ENSMUST00000103074.2|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chrX_-_87159237_87159281	0.014000171150216699	Hoxa6	ENSMUST00000113966.8|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1	ENSMUST00000113964.2|Il1rapl1|ENSMUSG00000052372.11|interleukin 1 receptor accessory protein-like 1
mm39_v1_chr17_+_3532455_3532483	0.013984910438604378	Hoxa6	ENSMUST00000227604.2|Tiam2|ENSMUSG00000023800.16|T cell lymphoma invasion and metastasis 2
mm39_v1_chr7_+_90739904_90739959	0.013585020080591318	Hoxa6	ENSMUST00000107196.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000074273.10|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr11_-_99265721_99265735	0.013501007302349535	Hoxa6	ENSMUST00000006963.3|Krt28|ENSMUSG00000055937.2|keratin 28
mm39_v1_chr2_+_101455079_101455101	0.013336562355096475	Hoxa6	ENSMUST00000111227.2|Rag2|ENSMUSG00000032864.5|recombination activating gene 2
mm39_v1_chr18_+_23548455_23548511	0.012723773728603015	Hoxa6	ENSMUST00000115832.4|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha
mm39_v1_chr2_-_136958544_136958564	0.012581842357474804	Hoxa6	ENSMUST00000028735.8|Jag1|ENSMUSG00000027276.8|jagged 1
mm39_v1_chr13_-_103042554_103042619	0.012303334212082557	Hoxa6	ENSMUST00000171791.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr1_+_187730018_187730031	0.012260874856183658	Hoxa6	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr4_-_35845204_35845204	0.011809657910002892	Hoxa6	ENSMUST00000164772.8|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2	ENSMUST00000065173.9|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2
mm39_v1_chr3_+_129974531_129974548	0.011733972534845373	Hoxa6	ENSMUST00000080335.11|Col25a1|ENSMUSG00000058897.19|collagen, type XXV, alpha 1	ENSMUST00000106353.2|Col25a1|ENSMUSG00000058897.19|collagen, type XXV, alpha 1
mm39_v1_chr9_-_60048503_60048529	0.011616569209962286	Hoxa6	ENSMUST00000034829.6|Thsd4|ENSMUSG00000032289.16|thrombospondin, type I, domain containing 4
mm39_v1_chr8_-_46747629_46747708	0.011501012437534914	Hoxa6	ENSMUST00000058636.9|Helt|ENSMUSG00000047171.9|helt bHLH transcription factor
mm39_v1_chr12_+_29578354_29578468	0.01117765596363631	Hoxa6	ENSMUST00000218583.2|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like	ENSMUST00000049784.17|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr14_-_52248324_52248369	0.01108426190969673	Hoxa6	ENSMUST00000226964.2|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219
mm39_v1_chr18_+_82929037_82929069	0.011008414595767003	Hoxa6	ENSMUST00000236858.2|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr4_-_110144676_110144731	0.01093301517972781	Hoxa6	ENSMUST00000106598.8|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4	ENSMUST00000102723.11|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4	ENSMUST00000153906.2|Elavl4|ENSMUSG00000028546.18|ELAV like RNA binding protein 4
mm39_v1_chr18_-_14105670_14105844	0.010809063054642758	Hoxa6	ENSMUST00000025288.9|Zfp521|ENSMUSG00000024420.10|zinc finger protein 521
mm39_v1_chr7_-_115637970_115637985	0.010753691447251145	Hoxa6	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr1_+_187730032_187730082	0.01073452492130157	Hoxa6	ENSMUST00000110938.2|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr17_-_59298338_59298370	0.010351115177966103	Hoxa6	ENSMUST00000025064.14|Pdzph1|ENSMUSG00000024227.15|PDZ and pleckstrin homology domains 1
mm39_v1_chr5_-_86437119_86437167	0.010106817741115055	Hoxa6	ENSMUST00000196462.2|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c	ENSMUST00000059424.10|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c
mm39_v1_chr6_-_138404076_138404160	0.01003142401733884	Hoxa6	ENSMUST00000203435.3|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr4_-_14621497_14621506	0.009950962219446318	Hoxa6	ENSMUST00000149633.2|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr7_-_115459082_115459098	0.00992667844691541	Hoxa6	ENSMUST00000206123.2|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr15_+_28203872_28203898	0.009616296822217405	Hoxa6	ENSMUST00000067048.8|Dnah5|ENSMUSG00000022262.9|dynein, axonemal, heavy chain 5
mm39_v1_chr10_-_20600442_20600598	0.009580569728389549	Hoxa6	ENSMUST00000170265.8|Pde7b|ENSMUSG00000019990.16|phosphodiesterase 7B
mm39_v1_chr3_+_29568055_29568055	0.00951373673845156	Hoxa6	ENSMUST00000140288.2|Egfem1|ENSMUSG00000063600.15|EGF-like and EMI domain containing 1
mm39_v1_chr19_+_55883924_55883942	0.009507850016920234	Hoxa6	ENSMUST00000111646.8|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr12_-_104439589_104439633	0.009458234780273187	Hoxa6	ENSMUST00000021513.6|Gsc|ENSMUSG00000021095.6|goosecoid homeobox
mm39_v1_chr4_+_101365144_101365229	0.009291319452007792	Hoxa6	ENSMUST00000149047.8|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6	ENSMUST00000106929.10|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6
mm39_v1_chr4_+_19280850_19280908	0.009186297353712352	Hoxa6	ENSMUST00000102999.2|Cngb3|ENSMUSG00000056494.8|cyclic nucleotide gated channel beta 3
mm39_v1_chr7_+_91321500_91321598	0.009109598163973819	Hoxa6	ENSMUST00000238619.2|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2	ENSMUST00000238467.2|Dlg2|ENSMUSG00000052572.20|discs large MAGUK scaffold protein 2
mm39_v1_chr14_-_48900192_48900329	0.009014389351004957	Hoxa6	ENSMUST00000122009.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr2_-_168608949_168608965	0.00900380644949433	Hoxa6	ENSMUST00000075044.10|Sall4|ENSMUSG00000027547.18|spalt like transcription factor 4
mm39_v1_chr18_+_23548534_23548567	0.00877993068053953	Hoxa6	ENSMUST00000221880.2|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha	ENSMUST00000220904.2|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha	ENSMUST00000047954.15|Dtna|ENSMUSG00000024302.17|dystrobrevin alpha
mm39_v1_chr1_+_100025486_100025486	0.008722537743661149	Hoxa6	ENSMUST00000188735.2|Cntnap5b|ENSMUSG00000067028.12|contactin associated protein-like 5B
mm39_v1_chr11_-_99412162_99412166	0.008661228848444332	Hoxa6	ENSMUST00000107445.8|Krt39|ENSMUSG00000064165.9|keratin 39
mm39_v1_chr1_+_70764874_70765082	0.008568286420579501	Hoxa6	ENSMUST00000053922.12|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000161937.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like	ENSMUST00000162182.2|Vwc2l|ENSMUSG00000045648.16|von Willebrand factor C domain-containing protein 2-like
mm39_v1_chr1_-_126758369_126758515	0.008479560830766045	Hoxa6	ENSMUST00000112583.8|Nckap5|ENSMUSG00000049690.16|NCK-associated protein 5	ENSMUST00000094609.10|Nckap5|ENSMUSG00000049690.16|NCK-associated protein 5
mm39_v1_chr6_-_138399896_138399997	0.008348436768711545	Hoxa6	ENSMUST00000161450.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3	ENSMUST00000163024.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3	ENSMUST00000162185.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr1_+_19173246_19173267	0.008267917030447386	Hoxa6	ENSMUST00000037294.8|Tfap2d|ENSMUSG00000042596.8|transcription factor AP-2, delta
mm39_v1_chr3_+_55689921_55689940	0.008207175833903773	Hoxa6	ENSMUST00000075422.6|Mab21l1|ENSMUSG00000056947.6|mab-21-like 1
mm39_v1_chr5_+_20433169_20433220	0.008087765838089142	Hoxa6	ENSMUST00000197553.5|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2	ENSMUST00000208219.2|Magi2|ENSMUSG00000040003.19|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm39_v1_chr6_-_13838423_13838453	0.007962873795858095	Hoxa6	ENSMUST00000115492.2|Gpr85|ENSMUSG00000048216.14|G protein-coupled receptor 85
mm39_v1_chr3_+_75982890_75982890	0.007909817700917808	Hoxa6	ENSMUST00000160261.8|Fstl5|ENSMUSG00000034098.15|follistatin-like 5
mm39_v1_chr13_+_55547498_55547513	0.007797823004929128	Hoxa6	ENSMUST00000057167.9|Slc34a1|ENSMUSG00000021490.12|solute carrier family 34 (sodium phosphate), member 1
mm39_v1_chr5_+_13449276_13449350	0.007749760555803707	Hoxa6	ENSMUST00000030714.9|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	ENSMUST00000141968.2|Sema3a|ENSMUSG00000028883.20|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm39_v1_chr1_+_81054992_81055044	0.007656063165716263	Hoxa6	ENSMUST00000068275.12|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2	ENSMUST00000113494.9|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm39_v1_chr6_+_34686373_34686381	0.007625735774334203	Hoxa6	ENSMUST00000115021.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr11_-_99412084_99412121	0.007588246495671224	Hoxa6	ENSMUST00000076948.2|Krt39|ENSMUSG00000064165.9|keratin 39
mm39_v1_chr14_+_10123804_10123919	0.007455528092468562	Hoxa6	ENSMUST00000022262.6|Fezf2|ENSMUSG00000021743.7|Fez family zinc finger 2	ENSMUST00000224714.2|Fezf2|ENSMUSG00000021743.7|Fez family zinc finger 2
mm39_v1_chr5_+_67125759_67125790	0.0074439679300894995	Hoxa6	ENSMUST00000238993.2|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1	ENSMUST00000038188.14|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr3_+_60436163_60436452	0.0073380666135195215	Hoxa6	ENSMUST00000194201.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000193517.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr6_-_101176147_101176161	0.007324607812103215	Hoxa6	ENSMUST00000239140.2|Pdzrn3|ENSMUSG00000035357.18|PDZ domain containing RING finger 3
mm39_v1_chr2_+_127750978_127750978	0.007307547200625551	Hoxa6	ENSMUST00000110344.2|Acoxl|ENSMUSG00000027380.11|acyl-Coenzyme A oxidase-like
mm39_v1_chr15_-_98507913_98507991	0.007273161548820014	Hoxa6	ENSMUST00000226500.2|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6	ENSMUST00000227501.2|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr10_+_42736644_42736673	0.007230267437892047	Hoxa6	ENSMUST00000105495.8|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr14_-_109151590_109151615	0.007093701995055635	Hoxa6	ENSMUST00000100322.4|Slitrk1|ENSMUSG00000075478.4|SLIT and NTRK-like family, member 1
mm39_v1_chr14_-_118289557_118289597	0.006973615723354128	Hoxa6	ENSMUST00000022725.4|Dct|ENSMUSG00000022129.5|dopachrome tautomerase
mm39_v1_chrX_+_162923474_162923614	0.006966920935920356	Hoxa6	ENSMUST00000073973.11|Ace2|ENSMUSG00000015405.16|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm39_v1_chr14_-_48902555_48902572	0.006832310802417063	Hoxa6	ENSMUST00000118578.9|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr17_+_93506435_93506459	0.006765283011383392	Hoxa6	ENSMUST00000234646.2|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1	ENSMUST00000234081.2|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1
mm39_v1_chr18_-_81029751_81029751	0.00671537619400559	Hoxa6	ENSMUST00000238808.2|Sall3|ENSMUSG00000024565.11|spalt like transcription factor 3
mm39_v1_chr1_+_81054921_81054969	0.006550265267641774	Hoxa6	ENSMUST00000123720.8|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm39_v1_chr5_-_6926523_6926523	0.006279033129435583	Hoxa6	ENSMUST00000164784.2|Zfp804b|ENSMUSG00000092094.6|zinc finger protein 804B
mm39_v1_chr10_+_90412827_90412885	0.006277617892378137	Hoxa6	ENSMUST00000182550.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000099364.12|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr18_+_69652837_69652862	0.0061983715343798765	Hoxa6	ENSMUST00000201410.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000202937.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chrX_-_42363663_42363663	0.006108849986508213	Hoxa6	ENSMUST00000016294.8|Tenm1|ENSMUSG00000016150.16|teneurin transmembrane protein 1
mm39_v1_chr17_+_93506590_93506601	0.005998284005379262	Hoxa6	ENSMUST00000064775.8|Adcyap1|ENSMUSG00000024256.8|adenylate cyclase activating polypeptide 1
mm39_v1_chr8_+_91681898_91682043	0.005983997854945534	Hoxa6	ENSMUST00000209746.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr7_-_37472290_37472316	0.005962586487801419	Hoxa6	ENSMUST00000176205.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr5_+_90608751_90608767	0.005953189257690071	Hoxa6	ENSMUST00000031314.10|Alb|ENSMUSG00000029368.11|albumin
mm39_v1_chr3_+_55369288_55369383	0.005927084955729514	Hoxa6	ENSMUST00000198412.5|Dclk1|ENSMUSG00000027797.16|doublecortin-like kinase 1	ENSMUST00000199169.5|Dclk1|ENSMUSG00000027797.16|doublecortin-like kinase 1	ENSMUST00000199702.5|Dclk1|ENSMUSG00000027797.16|doublecortin-like kinase 1	ENSMUST00000198437.5|Dclk1|ENSMUSG00000027797.16|doublecortin-like kinase 1
mm39_v1_chr6_-_93890520_93890544	0.005875762324825025	Hoxa6	ENSMUST00000203688.3|Magi1|ENSMUSG00000045095.17|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm39_v1_chr5_-_67256578_67256644	0.005783072415261066	Hoxa6	ENSMUST00000012664.11|Phox2b|ENSMUSG00000012520.11|paired-like homeobox 2b
mm39_v1_chr10_+_52267702_52267706	0.005721364301198779	Hoxa6	ENSMUST00000067085.7|Nepn|ENSMUSG00000038624.14|nephrocan
mm39_v1_chr9_-_112016834_112016930	0.005678762401863067	Hoxa6	ENSMUST00000111872.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21	ENSMUST00000164754.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21
mm39_v1_chr3_-_33136153_33136217	0.005645778662866314	Hoxa6	ENSMUST00000108225.10|Pex5l|ENSMUSG00000027674.17|peroxisomal biogenesis factor 5-like
mm39_v1_chr6_-_145811028_145811085	0.00549213668954579	Hoxa6	ENSMUST00000111703.2|Bhlhe41|ENSMUSG00000030256.12|basic helix-loop-helix family, member e41
mm39_v1_chr12_-_101785307_101785321	0.005489301129802111	Hoxa6	ENSMUST00000021603.9|Fbln5|ENSMUSG00000021186.10|fibulin 5
mm39_v1_chr2_+_181408833_181408866	0.005348833720359696	Hoxa6	ENSMUST00000108756.8|Myt1|ENSMUSG00000010505.17|myelin transcription factor 1
mm39_v1_chr13_-_40887444_40887467	0.0052610772349996095	Hoxa6	ENSMUST00000224665.2|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr8_+_55407872_55407889	0.005259446255794182	Hoxa6	ENSMUST00000033915.9|Gpm6a|ENSMUSG00000031517.9|glycoprotein m6a
mm39_v1_chr6_-_136148820_136148887	0.005237025632925861	Hoxa6	ENSMUST00000188999.3|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr13_+_110063364_110063415	0.005173333654759739	Hoxa6	ENSMUST00000117420.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr13_+_27241551_27241567	0.004978786571580072	Hoxa6	ENSMUST00000110369.10|Prl|ENSMUSG00000021342.15|prolactin	ENSMUST00000224228.2|Prl|ENSMUSG00000021342.15|prolactin	ENSMUST00000018061.7|Prl|ENSMUSG00000021342.15|prolactin
mm39_v1_chr11_-_37126709_37126821	0.004978546783179283	Hoxa6	ENSMUST00000102801.8|Tenm2|ENSMUSG00000049336.17|teneurin transmembrane protein 2
mm39_v1_chr19_+_22670134_22670191	0.004867780237109309	Hoxa6	ENSMUST00000237470.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000099564.10|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000099569.10|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000099566.5|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000235712.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3
mm39_v1_chr19_-_53360197_53360197	0.004857927472975605	Hoxa6	ENSMUST00000086887.2|Gm10197|ENSMUSG00000067085.2|predicted gene 10197
mm39_v1_chr10_+_87695117_87695128	0.004816802776056215	Hoxa6	ENSMUST00000105300.9|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr2_-_87805007_87805007	0.0047204564845815394	Hoxa6	ENSMUST00000099840.2|Olfr74|ENSMUSG00000075142.2|olfactory receptor 74
mm39_v1_chr4_+_101365052_101365068	0.004673912330145974	Hoxa6	ENSMUST00000038207.12|Dnajc6|ENSMUSG00000028528.18|DnaJ heat shock protein family (Hsp40) member C6
mm39_v1_chr3_+_125197722_125197780	0.004670344801347072	Hoxa6	ENSMUST00000173932.8|Ndst4|ENSMUSG00000027971.17|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm39_v1_chr1_-_126758520_126758536	0.004600023328194692	Hoxa6	ENSMUST00000162646.8|Nckap5|ENSMUSG00000049690.16|NCK-associated protein 5
mm39_v1_chr4_-_21685781_21685805	0.004577795040421625	Hoxa6	ENSMUST00000076206.11|Prdm13|ENSMUSG00000040478.15|PR domain containing 13
mm39_v1_chr19_+_56276343_56276371	0.0045630211193721185	Hoxa6	ENSMUST00000095948.11|Habp2|ENSMUSG00000025075.15|hyaluronic acid binding protein 2
mm39_v1_chr5_+_88523967_88523967	0.004538879884287942	Hoxa6	ENSMUST00000073363.2|Amtn|ENSMUSG00000029282.4|amelotin
mm39_v1_chr3_-_59127571_59127680	0.0043996694969971285	Hoxa6	ENSMUST00000199675.2|P2ry12|ENSMUSG00000036353.14|purinergic receptor P2Y, G-protein coupled 12	ENSMUST00000170388.6|P2ry12|ENSMUSG00000036353.14|purinergic receptor P2Y, G-protein coupled 12
mm39_v1_chr10_+_116111441_116111481	0.004385828913931604	Hoxa6	ENSMUST00000218553.2|Ptprb|ENSMUSG00000020154.11|protein tyrosine phosphatase, receptor type, B
mm39_v1_chr16_+_6887689_6887710	0.004383594878048715	Hoxa6	ENSMUST00000229741.2|Rbfox1|ENSMUSG00000008658.17|RNA binding protein, fox-1 homolog (C. elegans) 1
mm39_v1_chr6_-_50631418_50631427	0.004246761802096089	Hoxa6	ENSMUST00000031853.8|Npvf|ENSMUSG00000029831.8|neuropeptide VF precursor
mm39_v1_chr2_+_138120401_138120451	0.004237051196498632	Hoxa6	ENSMUST00000075410.5|Btbd3|ENSMUSG00000062098.12|BTB (POZ) domain containing 3
mm39_v1_chr3_+_114874614_114874703	0.004211372312938257	Hoxa6	ENSMUST00000051309.9|Olfm3|ENSMUSG00000027965.16|olfactomedin 3
mm39_v1_chr10_+_101517556_101517607	0.00416640294609015	Hoxa6	ENSMUST00000156751.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr2_-_63014622_63014681	0.004123041039006489	Hoxa6	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr5_+_107656810_107656810	0.004104184994979695	Hoxa6	ENSMUST00000160160.6|Gm42669|ENSMUSG00000106631.3|predicted gene 42669
mm39_v1_chr8_-_37420293_37420314	0.0040357182449933405	Hoxa6	ENSMUST00000179501.2|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr1_-_164988342_164988350	0.003964304048868031	Hoxa6	ENSMUST00000027859.12|Tbx19|ENSMUSG00000026572.12|T-box 19
mm39_v1_chr19_+_27299939_27299991	0.0039496183372136	Hoxa6	ENSMUST00000056708.4|Kcnv2|ENSMUSG00000047298.4|potassium channel, subfamily V, member 2
mm39_v1_chr15_+_92495007_92495051	0.003915329772110266	Hoxa6	ENSMUST00000035399.10|Pdzrn4|ENSMUSG00000036218.17|PDZ domain containing RING finger 4
mm39_v1_chr12_-_46863726_46863743	0.003908111639658372	Hoxa6	ENSMUST00000219330.2|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr2_+_105505772_105505794	0.0039012783185974047	Hoxa6	ENSMUST00000111085.8|Pax6|ENSMUSG00000027168.22|paired box 6
mm39_v1_chr10_-_107555840_107555912	0.003862043948270396	Hoxa6	ENSMUST00000050702.9|Ptprq|ENSMUSG00000035916.9|protein tyrosine phosphatase, receptor type, Q
mm39_v1_chr1_-_25267894_25267916	0.003841277802903005	Hoxa6	ENSMUST00000126626.8|Adgrb3|ENSMUSG00000033569.18|adhesion G protein-coupled receptor B3
mm39_v1_chr11_-_42211868_42211884	0.003824648043290073	Hoxa6	ENSMUST00000020703.13|Gabra6|ENSMUSG00000020428.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	ENSMUST00000155218.9|Gabra6|ENSMUSG00000020428.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm39_v1_chr5_-_147244074_147244091	0.0037895300977732337	Hoxa6	ENSMUST00000031650.4|Cdx2|ENSMUSG00000029646.4|caudal type homeobox 2
mm39_v1_chr11_+_96242422_96242461	0.0037741669589373456	Hoxa6	ENSMUST00000100523.7|Hoxb2|ENSMUSG00000075588.7|homeobox B2
mm39_v1_chr2_+_67004178_67004218	0.003655053871131035	Hoxa6	ENSMUST00000239009.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000238912.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2
mm39_v1_chr13_+_42834989_42835062	0.003577178919255203	Hoxa6	ENSMUST00000149235.8|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1
mm39_v1_chr2_-_76720097_76720269	0.0035616869537930754	Hoxa6	ENSMUST00000148747.8|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr10_+_90412432_90412530	0.0034686030615507907	Hoxa6	ENSMUST00000182786.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182600.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr2_-_74489763_74489901	0.00342057938879196	Hoxa6	ENSMUST00000173623.2|Evx2|ENSMUSG00000001815.16|even-skipped homeobox 2	ENSMUST00000001867.13|Evx2|ENSMUSG00000001815.16|even-skipped homeobox 2
mm39_v1_chr5_+_81169049_81169093	0.003413077110747499	Hoxa6	ENSMUST00000117253.8|Adgrl3|ENSMUSG00000037605.17|adhesion G protein-coupled receptor L3	ENSMUST00000120128.8|Adgrl3|ENSMUSG00000037605.17|adhesion G protein-coupled receptor L3
mm39_v1_chr14_-_110992533_110992584	0.003302735094461243	Hoxa6	ENSMUST00000078386.4|Slitrk6|ENSMUSG00000045871.6|SLIT and NTRK-like family, member 6
mm39_v1_chr10_+_90412570_90412628	0.0032817122175114823	Hoxa6	ENSMUST00000182430.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182960.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182045.2|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182083.2|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr3_+_14011445_14011476	0.003238232192332916	Hoxa6	ENSMUST00000192209.6|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like	ENSMUST00000171075.8|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like	ENSMUST00000108372.4|Ralyl|ENSMUSG00000039717.17|RALY RNA binding protein-like
mm39_v1_chr13_-_103042294_103042318	0.003170277840742427	Hoxa6	ENSMUST00000167462.8|Mast4|ENSMUSG00000034751.18|microtubule associated serine/threonine kinase family member 4
mm39_v1_chr4_-_97666279_97666307	0.003135729000472692	Hoxa6	ENSMUST00000146447.8|E130114P18Rik|ENSMUSG00000048747.15|RIKEN cDNA E130114P18 gene
mm39_v1_chr6_-_144155167_144155195	0.003114779504748843	Hoxa6	ENSMUST00000077160.12|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr2_-_35994819_35994903	0.0030782449635254516	Hoxa6	ENSMUST00000148852.4|Lhx6|ENSMUSG00000026890.20|LIM homeobox protein 6
mm39_v1_chr18_-_14105591_14105611	0.0030599552444188897	Hoxa6	ENSMUST00000234025.2|Zfp521|ENSMUSG00000024420.10|zinc finger protein 521
mm39_v1_chr11_-_99979052_99979096	0.0030505136898891527	Hoxa6	ENSMUST00000107419.2|Krt32|ENSMUSG00000046095.6|keratin 32
mm39_v1_chr15_+_10952418_10952449	0.0029573887922880507	Hoxa6	ENSMUST00000022853.15|C1qtnf3|ENSMUSG00000058914.13|C1q and tumor necrosis factor related protein 3	ENSMUST00000110523.2|C1qtnf3|ENSMUSG00000058914.13|C1q and tumor necrosis factor related protein 3
mm39_v1_chr11_-_41891662_41891715	0.0028479896718169957	Hoxa6	ENSMUST00000070725.11|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr1_+_19282278_19282330	0.0028376515601421116	Hoxa6	ENSMUST00000064976.6|Tfap2b|ENSMUSG00000025927.14|transcription factor AP-2 beta
mm39_v1_chr2_+_74552322_74552418	0.0028314063301379078	Hoxa6	ENSMUST00000047904.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr2_+_105505823_105505872	0.002823477520747507	Hoxa6	ENSMUST00000167211.9|Pax6|ENSMUSG00000027168.22|paired box 6	ENSMUST00000111083.10|Pax6|ENSMUSG00000027168.22|paired box 6
mm39_v1_chr3_+_55369384_55369399	0.0027748999106689655	Hoxa6	ENSMUST00000200352.2|Dclk1|ENSMUSG00000027797.16|doublecortin-like kinase 1
mm39_v1_chr10_+_90412638_90412677	0.002738392476804168	Hoxa6	ENSMUST00000183136.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182595.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr2_-_76700830_76700955	0.0027374919312372283	Hoxa6	ENSMUST00000138542.2|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr6_-_144155197_144155294	0.002715760604186892	Hoxa6	ENSMUST00000038815.14|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111749.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000170367.9|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr5_+_115573055_115573088	0.002692461101882321	Hoxa6	ENSMUST00000136586.6|Msi1|ENSMUSG00000054256.12|musashi RNA-binding protein 1
mm39_v1_chr1_-_160405464_160405544	0.002692441025326477	Hoxa6	ENSMUST00000238289.2|Gpr52|ENSMUSG00000118401.2|G protein-coupled receptor 52
mm39_v1_chr13_-_78344492_78344561	0.0026671829898144684	Hoxa6	ENSMUST00000125176.3|Nr2f1|ENSMUSG00000069171.15|nuclear receptor subfamily 2, group F, member 1
mm39_v1_chr1_-_14374794_14374833	0.002636745430243091	Hoxa6	ENSMUST00000190337.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr15_+_18819033_18819048	0.002634346102621801	Hoxa6	ENSMUST00000166873.9|Cdh10|ENSMUSG00000022321.16|cadherin 10
mm39_v1_chr3_+_93301003_93301006	0.002599939475702098	Hoxa6	ENSMUST00000045912.3|Rptn|ENSMUSG00000041984.3|repetin
mm39_v1_chr16_-_26810402_26810402	0.0025294342009310362	Hoxa6	ENSMUST00000231299.2|Gmnc|ENSMUSG00000068428.8|geminin coiled-coil domain containing
mm39_v1_chr12_+_29584560_29584643	0.0025263657145935675	Hoxa6	ENSMUST00000021009.10|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr15_+_39255185_39255196	0.0025161728694083163	Hoxa6	ENSMUST00000228839.2|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2
mm39_v1_chr11_+_67061837_67061866	0.0024950235624797944	Hoxa6	ENSMUST00000170159.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr4_-_97472844_97472880	0.0024674136617696867	Hoxa6	ENSMUST00000107067.8|E130114P18Rik|ENSMUSG00000048747.15|RIKEN cDNA E130114P18 gene	ENSMUST00000107068.9|E130114P18Rik|ENSMUSG00000048747.15|RIKEN cDNA E130114P18 gene
mm39_v1_chr6_+_104469751_104469926	0.002459391991922703	Hoxa6	ENSMUST00000161446.2|Cntn6|ENSMUSG00000030092.15|contactin 6	ENSMUST00000161070.8|Cntn6|ENSMUSG00000030092.15|contactin 6	ENSMUST00000089215.12|Cntn6|ENSMUSG00000030092.15|contactin 6
mm39_v1_chr13_-_40441487_40441487	0.002414511042357719	Hoxa6	ENSMUST00000054635.8|Ofcc1|ENSMUSG00000047094.10|orofacial cleft 1 candidate 1
mm39_v1_chr11_+_96194333_96194378	0.0024025547859337724	Hoxa6	ENSMUST00000049272.5|Hoxb5|ENSMUSG00000038700.5|homeobox B5
mm39_v1_chr19_+_56276375_56276428	0.0023726430789959172	Hoxa6	ENSMUST00000166049.8|Habp2|ENSMUSG00000025075.15|hyaluronic acid binding protein 2
mm39_v1_chr2_+_177969456_177969585	0.002367411234970177	Hoxa6	ENSMUST00000133267.3|Phactr3|ENSMUSG00000027525.19|phosphatase and actin regulator 3
mm39_v1_chr10_+_90412114_90412379	0.0023592409707269076	Hoxa6	ENSMUST00000182427.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182053.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182113.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr9_-_42311196_42311225	0.0023391253418626394	Hoxa6	ENSMUST00000042190.14|Tecta|ENSMUSG00000037705.14|tectorin alpha
mm39_v1_chr9_-_76953070_76953104	0.0022941159959789298	Hoxa6	ENSMUST00000034911.7|Tinag|ENSMUSG00000032357.13|tubulointerstitial nephritis antigen
mm39_v1_chr6_+_34686543_34686569	0.00224109956505658	Hoxa6	ENSMUST00000031775.13|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr17_+_75485906_75485956	0.0022403159118404505	Hoxa6	ENSMUST00000112514.2|Ltbp1|ENSMUSG00000001870.17|latent transforming growth factor beta binding protein 1
mm39_v1_chr7_+_131144596_131144596	0.0022262764933161086	Hoxa6	ENSMUST00000046093.6|Hmx3|ENSMUSG00000040148.6|H6 homeobox 3
mm39_v1_chr5_-_69699965_69699991	0.0022039766431103096	Hoxa6	ENSMUST00000031045.10|Yipf7|ENSMUSG00000029158.10|Yip1 domain family, member 7
mm39_v1_chr11_-_41891359_41891421	0.00214917432806558	Hoxa6	ENSMUST00000070735.10|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr10_+_90412539_90412553	0.002133653304918298	Hoxa6	ENSMUST00000182284.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr9_+_43222104_43222145	0.002120885690838656	Hoxa6	ENSMUST00000034511.7|Trim29|ENSMUSG00000032013.7|tripartite motif-containing 29
mm39_v1_chr15_+_16728842_16728842	0.002116929158064082	Hoxa6	ENSMUST00000228307.2|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr9_-_42311007_42311023	0.002086119090507566	Hoxa6	ENSMUST00000160940.2|Tecta|ENSMUSG00000037705.14|tectorin alpha
mm39_v1_chr11_+_67061908_67062046	0.002079355939604362	Hoxa6	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr10_+_42736539_42736625	0.0020545337336662023	Hoxa6	ENSMUST00000157071.8|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr18_-_23174698_23174729	0.0020436014926395294	Hoxa6	ENSMUST00000097651.10|Nol4|ENSMUSG00000041923.16|nucleolar protein 4
mm39_v1_chr2_+_74522258_74522284	0.002008873367532766	Hoxa6	ENSMUST00000061745.5|Hoxd10|ENSMUSG00000050368.5|homeobox D10
mm39_v1_chr11_-_42211886_42211899	0.0019969325824826614	Hoxa6	ENSMUST00000109286.4|Gabra6|ENSMUSG00000020428.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm39_v1_chr11_-_33153587_33153612	0.0019588852650480955	Hoxa6	ENSMUST00000037746.8|Tlx3|ENSMUSG00000040610.8|T cell leukemia, homeobox 3
mm39_v1_chr11_-_99213769_99213783	0.0018400820047357516	Hoxa6	ENSMUST00000038004.3|Krt25|ENSMUSG00000035831.3|keratin 25
mm39_v1_chr8_+_57774010_57774027	0.0018032046435084328	Hoxa6	ENSMUST00000040104.5|Hand2|ENSMUSG00000038193.5|heart and neural crest derivatives expressed 2
mm39_v1_chr2_+_181409075_181409117	0.0017730785986091202	Hoxa6	ENSMUST00000108757.9|Myt1|ENSMUSG00000010505.17|myelin transcription factor 1
mm39_v1_chr3_+_127426783_127426789	0.0016970132357760136	Hoxa6	ENSMUST00000029587.9|Neurog2|ENSMUSG00000027967.9|neurogenin 2
mm39_v1_chr17_-_90395568_90395642	0.0016095839128437259	Hoxa6	ENSMUST00000173222.2|Nrxn1|ENSMUSG00000024109.19|neurexin I
mm39_v1_chr5_-_69699932_69699963	0.0016051686664184093	Hoxa6	ENSMUST00000202423.2|Yipf7|ENSMUSG00000029158.10|Yip1 domain family, member 7
mm39_v1_chr3_+_18108313_18108338	0.0014875018631555995	Hoxa6	ENSMUST00000026120.8|Bhlhe22|ENSMUSG00000025128.8|basic helix-loop-helix family, member e22
mm39_v1_chr14_-_124914516_124914539	0.0014506762031498731	Hoxa6	ENSMUST00000095529.10|Fgf14|ENSMUSG00000025551.14|fibroblast growth factor 14
mm39_v1_chr11_-_42073737_42073762	0.0014179682154195445	Hoxa6	ENSMUST00000206085.2|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	ENSMUST00000020707.12|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	ENSMUST00000132971.3|Gabra1|ENSMUSG00000010803.14|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm39_v1_chr17_-_72059865_72059889	0.001367793368901559	Hoxa6	ENSMUST00000057405.9|Pcare|ENSMUSG00000044375.9|photoreceptor cilium actin regulator
mm39_v1_chr5_+_89175815_89175826	0.0012320431169682668	Hoxa6	ENSMUST00000130041.8|Slc4a4|ENSMUSG00000060961.17|solute carrier family 4 (anion exchanger), member 4
mm39_v1_chr11_+_54486925_54487007	0.0011099645658014209	Hoxa6	ENSMUST00000218995.2|Rapgef6|ENSMUSG00000037533.21|Rap guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr4_-_91288221_91288247	0.0009935331666228082	Hoxa6	ENSMUST00000102799.10|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr2_+_61634797_61634890	0.0008870987806493104	Hoxa6	ENSMUST00000048934.15|Tbr1|ENSMUSG00000035033.16|T-box brain transcription factor 1
mm39_v1_chr6_+_104470181_104470209	0.0008352798256696759	Hoxa6	ENSMUST00000162872.2|Cntn6|ENSMUSG00000030092.15|contactin 6
mm39_v1_chr1_-_14374842_14374908	0.0007456245623376671	Hoxa6	ENSMUST00000188857.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000185453.7|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr9_-_37580478_37580531	0.0007404253032428741	Hoxa6	ENSMUST00000011262.4|Panx3|ENSMUSG00000011118.5|pannexin 3
mm39_v1_chr1_+_44022321_44022445	0.0007160324890810632	Hoxa6	ENSMUST00000190207.2|Tpp2|ENSMUSG00000041763.15|tripeptidyl peptidase II
mm39_v1_chr11_-_41891111_41891183	0.0007023759938248197	Hoxa6	ENSMUST00000109290.2|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr2_-_34951443_34951459	0.0006735571666755619	Hoxa6	ENSMUST00000028233.7|Hc|ENSMUSG00000026874.11|hemolytic complement
mm39_v1_chr7_-_37469049_37469102	0.0006598129208376485	Hoxa6	ENSMUST00000175941.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr8_+_59364789_59364789	0.0006260474055590983	Hoxa6	ENSMUST00000062978.7|BC030500|ENSMUSG00000049946.8|cDNA sequence BC030500
mm39_v1_chr5_+_67125902_67125920	0.0006014114180104936	Hoxa6	ENSMUST00000127184.8|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr17_-_3746536_3746536	0.0005402739418163749	Hoxa6	ENSMUST00000115800.2|Nox3|ENSMUSG00000023802.5|NADPH oxidase 3
mm39_v1_chr19_+_55730488_55730501	0.00036324959789762394	Hoxa6	ENSMUST00000111659.9|Tcf7l2|ENSMUSG00000024985.21|transcription factor 7 like 2, T cell specific, HMG box
mm39_v1_chr4_+_114678919_114678919	0.00027753524830043916	Hoxa6	ENSMUST00000137570.2|Gm12830|ENSMUSG00000055198.4|predicted gene 12830
mm39_v1_chr14_-_48904998_48905101	0.0002759990644041746	Hoxa6	ENSMUST00000152018.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr4_-_49408040_49408151	0.0002534760579868042	Hoxa6	ENSMUST00000081541.9|Acnat2|ENSMUSG00000060317.10|acyl-coenzyme A amino acid N-acyltransferase 2
mm39_v1_chr13_-_116446166_116446235	0.0002494868386894894	Hoxa6	ENSMUST00000036060.13|Isl1|ENSMUSG00000042258.14|ISL1 transcription factor, LIM/homeodomain
mm39_v1_chr6_-_135224881_135224963	0.00020956193890603068	Hoxa6	ENSMUST00000087729.12|Gsg1|ENSMUSG00000030206.14|germ cell associated 1
mm39_v1_chr2_+_124994425_124994526	0.00015732509573252097	Hoxa6	ENSMUST00000110494.9|Slc12a1|ENSMUSG00000027202.13|solute carrier family 12, member 1	ENSMUST00000110495.3|Slc12a1|ENSMUSG00000027202.13|solute carrier family 12, member 1	ENSMUST00000028630.9|Slc12a1|ENSMUSG00000027202.13|solute carrier family 12, member 1
mm39_v1_chr2_+_83786742_83786742	0.00012413832916399005	Hoxa6	ENSMUST00000178325.2|Gm13698|ENSMUSG00000094125.2|predicted gene 13698
mm39_v1_chr18_+_42527604_42527640	9.96242464955787e-05	Hoxa6	ENSMUST00000025374.4|Pou4f3|ENSMUSG00000024497.5|POU domain, class 4, transcription factor 3
mm39_v1_chr5_+_88635834_88635841	3.420791237393839e-05	Hoxa6	ENSMUST00000199104.5|Enam|ENSMUSG00000029286.13|enamelin	ENSMUST00000031222.9|Enam|ENSMUSG00000029286.13|enamelin
