mm39_v1_chr19_-_10857734_10857776	0.21706224158065596	Hoxc9	ENSMUST00000133303.8|Tmem109|ENSMUSG00000034659.15|transmembrane protein 109
mm39_v1_chr13_-_96803216_96803236	0.1976414176569457	Hoxc9	ENSMUST00000170287.8|Hmgcr|ENSMUSG00000021670.15|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm39_v1_chr19_+_24853039_24853057	0.1875816860018793	Hoxc9	ENSMUST00000073080.7|Gm10053|ENSMUSG00000058927.7|predicted gene 10053
mm39_v1_chr11_+_3280401_3280541	0.14831561963566528	Hoxc9	ENSMUST00000045153.11|Pik3ip1|ENSMUSG00000034614.15|phosphoinositide-3-kinase interacting protein 1
mm39_v1_chr10_+_96453408_96453419	0.1300647402353026	Hoxc9	ENSMUST00000218953.2|Btg1|ENSMUSG00000036478.9|BTG anti-proliferation factor 1
mm39_v1_chr10_+_43400074_43400110	0.11300614797036178	Hoxc9	ENSMUST00000057649.8|Gm9803|ENSMUSG00000045886.8|predicted gene 9803	ENSMUST00000216543.2|Gm9803|ENSMUSG00000045886.8|predicted gene 9803
mm39_v1_chr5_-_107873883_107873905	0.11240982802405104	Hoxc9	ENSMUST00000159263.3|Gfi1|ENSMUSG00000029275.19|growth factor independent 1 transcription repressor
mm39_v1_chr4_-_150087587_150087607	0.1094939418485835	Hoxc9	ENSMUST00000084117.13|H6pd|ENSMUSG00000028980.15|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm39_v1_chr6_-_119365632_119365734	0.09135627891097174	Hoxc9	ENSMUST00000169744.8|Adipor2|ENSMUSG00000030168.14|adiponectin receptor 2
mm39_v1_chr9_+_121539395_121539489	0.08297085068350758	Hoxc9	ENSMUST00000035113.11|Ss18l2|ENSMUSG00000032526.12|SS18, nBAF chromatin remodeling complex subunit like 2	ENSMUST00000215966.2|Ss18l2|ENSMUSG00000032526.12|SS18, nBAF chromatin remodeling complex subunit like 2	ENSMUST00000215833.2|Ss18l2|ENSMUSG00000032526.12|SS18, nBAF chromatin remodeling complex subunit like 2	ENSMUST00000215104.2|Ss18l2|ENSMUSG00000032526.12|SS18, nBAF chromatin remodeling complex subunit like 2
mm39_v1_chr11_-_72106418_72106418	0.08143850972260179	Hoxc9	ENSMUST00000021157.9|Med31|ENSMUSG00000020801.9|mediator complex subunit 31
mm39_v1_chr2_-_84481058_84481093	0.08089266848636903	Hoxc9	ENSMUST00000111670.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111697.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111696.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111678.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111690.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111695.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111677.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111698.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000099941.9|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111676.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111694.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111675.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111689.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111687.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111692.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111685.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111686.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111688.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111693.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1	ENSMUST00000111684.8|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr6_-_52190299_52190323	0.07914955506937892	Hoxc9	ENSMUST00000128102.4|Gm28308|ENSMUSG00000101298.2|predicted gene 28308
mm39_v1_chrX_+_55655111_55655177	0.07139647181134165	Hoxc9	ENSMUST00000144068.8|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6	ENSMUST00000077741.12|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6	ENSMUST00000114784.4|Slc9a6|ENSMUSG00000060681.16|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm39_v1_chr2_-_84480804_84480889	0.07114449899928343	Hoxc9	ENSMUST00000066177.10|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr2_-_84481020_84481031	0.07098035939287671	Hoxc9	ENSMUST00000067232.10|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr3_+_67799510_67799565	0.06950749127802164	Hoxc9	ENSMUST00000063263.5|Iqcj|ENSMUSG00000051777.7|IQ motif containing J	ENSMUST00000182006.4|Iqschfp|ENSMUSG00000102422.2|Iqcj and Schip1 fusion protein
mm39_v1_chr17_+_64203017_64203059	0.06918800942100932	Hoxc9	ENSMUST00000000129.14|Fer|ENSMUSG00000000127.16|fer (fms/fps related) protein kinase
mm39_v1_chr18_-_57108405_57108452	0.06755311867562418	Hoxc9	ENSMUST00000139243.9|C330018D20Rik|ENSMUSG00000024592.16|RIKEN cDNA C330018D20 gene	ENSMUST00000025488.15|C330018D20Rik|ENSMUSG00000024592.16|RIKEN cDNA C330018D20 gene
mm39_v1_chr17_+_24645615_24645678	0.06742911473698004	Hoxc9	ENSMUST00000234304.2|Eci1|ENSMUSG00000024132.7|enoyl-Coenzyme A delta isomerase 1	ENSMUST00000024946.7|Eci1|ENSMUSG00000024132.7|enoyl-Coenzyme A delta isomerase 1	ENSMUST00000234150.2|Eci1|ENSMUSG00000024132.7|enoyl-Coenzyme A delta isomerase 1
mm39_v1_chr4_+_118217179_118217227	0.06020166152313042	Hoxc9	ENSMUST00000006562.6|Hyi|ENSMUSG00000006395.17|hydroxypyruvate isomerase (putative)
mm39_v1_chr7_+_51537645_51537688	0.05729196634336886	Hoxc9	ENSMUST00000208711.2|Gas2|ENSMUSG00000030498.16|growth arrest specific 2
mm39_v1_chr10_+_128247598_128247627	0.054221773106536086	Hoxc9	ENSMUST00000096386.13|Rnf41|ENSMUSG00000025373.15|ring finger protein 41
mm39_v1_chr3_-_51184730_51184866	0.052575628681330866	Hoxc9	ENSMUST00000195432.2|Elf2|ENSMUSG00000037174.19|E74-like factor 2	ENSMUST00000091144.11|Elf2|ENSMUSG00000037174.19|E74-like factor 2	ENSMUST00000156983.3|Elf2|ENSMUSG00000037174.19|E74-like factor 2
mm39_v1_chr6_+_134373275_134373303	0.05148451834422826	Hoxc9	ENSMUST00000032321.11|Bcl2l14|ENSMUSG00000030200.14|BCL2-like 14 (apoptosis facilitator)
mm39_v1_chr8_-_23295603_23295666	0.0498518933109746	Hoxc9	ENSMUST00000163739.3|Ap3m2|ENSMUSG00000031539.7|adaptor-related protein complex 3, mu 2 subunit	ENSMUST00000210656.2|Ap3m2|ENSMUSG00000031539.7|adaptor-related protein complex 3, mu 2 subunit
mm39_v1_chr13_+_94219934_94220019	0.04817027971058162	Hoxc9	ENSMUST00000156071.2|Lhfpl2|ENSMUSG00000045312.13|lipoma HMGIC fusion partner-like 2
mm39_v1_chr11_-_79971750_79971828	0.04577860501101013	Hoxc9	ENSMUST00000103233.10|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3	ENSMUST00000061283.15|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3
mm39_v1_chr2_-_84481101_84481115	0.045024100543288204	Hoxc9	ENSMUST00000111691.2|Ctnnd1|ENSMUSG00000034101.15|catenin (cadherin associated protein), delta 1
mm39_v1_chr7_+_130633776_130633806	0.03738732013111164	Hoxc9	ENSMUST00000084509.7|Dmbt1|ENSMUSG00000047517.14|deleted in malignant brain tumors 1	ENSMUST00000213064.3|Dmbt1|ENSMUSG00000047517.14|deleted in malignant brain tumors 1	ENSMUST00000208311.4|Dmbt1|ENSMUSG00000047517.14|deleted in malignant brain tumors 1
mm39_v1_chr3_-_33898405_33898472	0.03626594489795671	Hoxc9	ENSMUST00000029222.8|Ccdc39|ENSMUSG00000027676.12|coiled-coil domain containing 39
mm39_v1_chr1_+_85538554_85538592	0.03460935883943595	Hoxc9	ENSMUST00000162925.2|Sp140|ENSMUSG00000070031.12|Sp140 nuclear body protein
mm39_v1_chr9_+_35334878_35334885	0.03445029531679664	Hoxc9	ENSMUST00000154652.8|Cdon|ENSMUSG00000038119.16|cell adhesion molecule-related/down-regulated by oncogenes
mm39_v1_chr8_+_15107646_15107660	0.03297630953485007	Hoxc9	ENSMUST00000033842.4|Myom2|ENSMUSG00000031461.5|myomesin 2
mm39_v1_chr12_-_15866763_15866923	0.03295051834156281	Hoxc9	ENSMUST00000020922.8|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2	ENSMUST00000221215.2|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2	ENSMUST00000221518.2|Trib2|ENSMUSG00000020601.9|tribbles pseudokinase 2
mm39_v1_chr1_+_60948149_60948193	0.03170727325462392	Hoxc9	ENSMUST00000027164.9|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr12_-_8550003_8550017	0.028663865020272197	Hoxc9	ENSMUST00000067384.6|Rhob|ENSMUSG00000054364.6|ras homolog family member B
mm39_v1_chr9_+_53678801_53678830	0.02789907758586362	Hoxc9	ENSMUST00000048670.10|Slc35f2|ENSMUSG00000042195.10|solute carrier family 35, member F2
mm39_v1_chr5_+_67417908_67418054	0.027004472086516365	Hoxc9	ENSMUST00000037918.12|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000162543.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000161233.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33	ENSMUST00000160352.8|Tmem33|ENSMUSG00000037720.17|transmembrane protein 33
mm39_v1_chr3_-_51184895_51184996	0.024966679074532514	Hoxc9	ENSMUST00000108051.8|Elf2|ENSMUSG00000037174.19|E74-like factor 2	ENSMUST00000108053.9|Elf2|ENSMUSG00000037174.19|E74-like factor 2
mm39_v1_chr7_-_4815111_4815146	0.023638769658527358	Hoxc9	ENSMUST00000205885.2|Ube2s|ENSMUSG00000060860.9|ubiquitin-conjugating enzyme E2S
mm39_v1_chr16_+_27126239_27126400	0.023476986628626857	Hoxc9	ENSMUST00000066852.9|Ostn|ENSMUSG00000052276.9|osteocrin
mm39_v1_chr10_+_5543769_5543809	0.023319980963318054	Hoxc9	ENSMUST00000051809.10|Myct1|ENSMUSG00000046916.10|myc target 1
mm39_v1_chr1_-_179572765_179572836	0.022604824221096893	Hoxc9	ENSMUST00000211943.3|Kif28|ENSMUSG00000087236.4|kinesin family member 28	ENSMUST00000131716.4|Kif28|ENSMUSG00000087236.4|kinesin family member 28	ENSMUST00000221136.2|Kif28|ENSMUSG00000087236.4|kinesin family member 28
mm39_v1_chr10_+_119655294_119655430	0.0210373829577864	Hoxc9	ENSMUST00000105262.9|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000147454.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000138410.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000144825.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000148954.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000144959.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1
mm39_v1_chr7_-_30312246_30312305	0.020615124991427775	Hoxc9	ENSMUST00000006476.6|Upk1a|ENSMUSG00000006313.6|uroplakin 1A
mm39_v1_chr5_+_102916637_102916681	0.01766979492407342	Hoxc9	ENSMUST00000112852.8|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24
mm39_v1_chr13_-_96607722_96607775	0.01712077811770726	Hoxc9	ENSMUST00000055607.13|Ankdd1b|ENSMUSG00000047117.14|ankyrin repeat and death domain containing 1B
mm39_v1_chr8_+_120955195_120955217	0.016950085158376735	Hoxc9	ENSMUST00000180448.3|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr6_+_54246120_54246146	0.016488413743123046	Hoxc9	ENSMUST00000114401.8|Chn2|ENSMUSG00000004633.18|chimerin 2
mm39_v1_chr10_+_4660119_4660166	0.015597560852210748	Hoxc9	ENSMUST00000105588.8|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)	ENSMUST00000105589.2|Esr1|ENSMUSG00000019768.17|estrogen receptor 1 (alpha)
mm39_v1_chr3_+_66893031_66893073	0.01541833464691196	Hoxc9	ENSMUST00000046542.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000162693.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr1_+_60948307_60948330	0.015243093745497729	Hoxc9	ENSMUST00000097720.4|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr9_-_13245834_13245834	0.015224373492120514	Hoxc9	ENSMUST00000110582.4|Jrkl|ENSMUSG00000079083.4|Jrk-like
mm39_v1_chr1_+_187730018_187730031	0.014818998928439438	Hoxc9	ENSMUST00000027906.13|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr2_-_177269992_177270003	0.014372109075371304	Hoxc9	ENSMUST00000108945.8|Gm14406|ENSMUSG00000078865.9|predicted gene 14406	ENSMUST00000108943.2|Gm14406|ENSMUSG00000078865.9|predicted gene 14406
mm39_v1_chr10_+_128247492_128247546	0.01384010973059816	Hoxc9	ENSMUST00000171342.3|Rnf41|ENSMUSG00000025373.15|ring finger protein 41
mm39_v1_chr5_-_86437119_86437167	0.012994319774086794	Hoxc9	ENSMUST00000196462.2|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c	ENSMUST00000059424.10|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c
mm39_v1_chr2_-_26406631_26406675	0.012835378232093334	Hoxc9	ENSMUST00000132820.2|Notch1|ENSMUSG00000026923.16|notch 1
mm39_v1_chr10_-_88440996_88441016	0.012367137287319255	Hoxc9	ENSMUST00000121629.8|Mybpc1|ENSMUSG00000020061.19|myosin binding protein C, slow-type
mm39_v1_chr1_+_187730032_187730082	0.0122491068374477	Hoxc9	ENSMUST00000110938.2|Esrrg|ENSMUSG00000026610.14|estrogen-related receptor gamma
mm39_v1_chr3_+_128993568_128993591	0.011223330967969245	Hoxc9	ENSMUST00000029657.16|Pitx2|ENSMUSG00000028023.17|paired-like homeodomain transcription factor 2	ENSMUST00000106382.11|Pitx2|ENSMUSG00000028023.17|paired-like homeodomain transcription factor 2
mm39_v1_chr7_-_115637970_115637985	0.011219789082677921	Hoxc9	ENSMUST00000166877.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr11_-_101785181_101785200	0.010796033686819018	Hoxc9	ENSMUST00000057054.8|Meox1|ENSMUSG00000001493.10|mesenchyme homeobox 1
mm39_v1_chrX_-_142716085_142716149	0.009871768400594491	Hoxc9	ENSMUST00000087313.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr10_+_52267702_52267706	0.009020997376100154	Hoxc9	ENSMUST00000067085.7|Nepn|ENSMUSG00000038624.14|nephrocan
mm39_v1_chr18_+_37822865_37822914	0.00868935710877562	Hoxc9	ENSMUST00000195112.2|Pcdhgb2|ENSMUSG00000102748.2|protocadherin gamma subfamily B, 2
mm39_v1_chr2_+_174852034_174852112	0.008187046955549044	Hoxc9	ENSMUST00000109069.8|Gm14444|ENSMUSG00000078906.10|predicted gene 14444	ENSMUST00000109070.3|Gm14444|ENSMUSG00000078906.10|predicted gene 14444
mm39_v1_chr8_+_119010458_119010477	0.008112526282486503	Hoxc9	ENSMUST00000117160.2|Cdh13|ENSMUSG00000031841.20|cadherin 13
mm39_v1_chr4_-_109059414_109059469	0.007991208645860807	Hoxc9	ENSMUST00000160774.8|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9	ENSMUST00000194478.6|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9	ENSMUST00000030288.14|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9	ENSMUST00000162787.9|Osbpl9|ENSMUSG00000028559.18|oxysterol binding protein-like 9
mm39_v1_chr10_-_88440869_88440914	0.007782645807036573	Hoxc9	ENSMUST00000119185.8|Mybpc1|ENSMUSG00000020061.19|myosin binding protein C, slow-type	ENSMUST00000238199.2|Mybpc1|ENSMUSG00000020061.19|myosin binding protein C, slow-type
mm39_v1_chr2_-_111320501_111320501	0.007605452188899918	Hoxc9	ENSMUST00000099616.2|Olfr1290|ENSMUSG00000095809.4|olfactory receptor 1290
mm39_v1_chr1_+_58249556_58249616	0.0071030808084846415	Hoxc9	ENSMUST00000040442.6|Aox4|ENSMUSG00000038242.13|aldehyde oxidase 4
mm39_v1_chr3_-_110050312_110050326	0.006289423341700678	Hoxc9	ENSMUST00000156177.9|Ntng1|ENSMUSG00000059857.16|netrin G1
mm39_v1_chr13_-_96607619_96607706	0.006061578028457061	Hoxc9	ENSMUST00000239026.2|Ankdd1b|ENSMUSG00000047117.14|ankyrin repeat and death domain containing 1B	ENSMUST00000181613.3|Ankdd1b|ENSMUSG00000047117.14|ankyrin repeat and death domain containing 1B
mm39_v1_chr9_-_39338444_39338444	0.0059704090527226555	Hoxc9	ENSMUST00000073895.4|Olfr952|ENSMUSG00000058856.4|olfactory receptor 952
mm39_v1_chr13_+_113346193_113346311	0.005556330896943787	Hoxc9	ENSMUST00000038144.9|Esm1|ENSMUSG00000042379.9|endothelial cell-specific molecule 1
mm39_v1_chr13_+_23433408_23433408	0.005309515034929556	Hoxc9	ENSMUST00000091719.2|Vmn1r223|ENSMUSG00000069280.3|vomeronasal 1 receptor 223
mm39_v1_chr17_-_57307018_57307018	0.005206643842739274	Hoxc9	ENSMUST00000002740.3|Pspn|ENSMUSG00000002664.3|persephin
mm39_v1_chr14_-_50424675_50424675	0.005185889441293216	Hoxc9	ENSMUST00000051453.2|Olfr730|ENSMUSG00000109835.3|olfactory receptor 730
mm39_v1_chr3_+_128993527_128993563	0.005038504588750998	Hoxc9	ENSMUST00000174661.9|Pitx2|ENSMUSG00000028023.17|paired-like homeodomain transcription factor 2
mm39_v1_chr14_+_53607470_53607534	0.0049463077533732904	Hoxc9	ENSMUST00000103652.5|Trav14n-3|ENSMUSG00000076824.4|T cell receptor alpha variable 14N-3
mm39_v1_chr2_-_76700830_76700955	0.004928904288770747	Hoxc9	ENSMUST00000138542.2|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr1_-_135934080_135934080	0.004922664171654818	Hoxc9	ENSMUST00000166193.9|Igfn1|ENSMUSG00000051985.13|immunoglobulin-like and fibronectin type III domain containing 1
mm39_v1_chr8_-_65489834_65489988	0.004676805763288311	Hoxc9	ENSMUST00000142822.4|Apela|ENSMUSG00000079042.11|apelin receptor early endogenous ligand
mm39_v1_chr10_+_69761784_69761963	0.004496709396015293	Hoxc9	ENSMUST00000181974.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000182795.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000182437.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr16_-_37205277_37205293	0.004270902319654464	Hoxc9	ENSMUST00000114787.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like	ENSMUST00000114782.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like	ENSMUST00000114775.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like
mm39_v1_chr1_+_66360865_66360878	0.004219161997132006	Hoxc9	ENSMUST00000114013.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr4_+_151081538_151081554	0.003964721588285425	Hoxc9	ENSMUST00000030803.2|Uts2|ENSMUSG00000028963.2|urotensin 2
mm39_v1_chrX_+_21350783_21350875	0.003725174989800565	Hoxc9	ENSMUST00000089188.9|Agtr2|ENSMUSG00000068122.11|angiotensin II receptor, type 2
mm39_v1_chr10_-_61814852_61814888	0.003632364235683862	Hoxc9	ENSMUST00000105453.8|Col13a1|ENSMUSG00000058806.16|collagen, type XIII, alpha 1	ENSMUST00000105452.9|Col13a1|ENSMUSG00000058806.16|collagen, type XIII, alpha 1	ENSMUST00000105454.3|Col13a1|ENSMUSG00000058806.16|collagen, type XIII, alpha 1
mm39_v1_chr16_-_37205302_37205341	0.003580995908377905	Hoxc9	ENSMUST00000114781.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like	ENSMUST00000114780.8|Stxbp5l|ENSMUSG00000022829.15|syntaxin binding protein 5-like
mm39_v1_chr2_+_74552322_74552418	0.0034000914441990565	Hoxc9	ENSMUST00000047904.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr4_-_91264727_91264740	0.0029714191981314564	Hoxc9	ENSMUST00000107124.10|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr12_-_113790741_113790824	0.0026798081086643055	Hoxc9	ENSMUST00000103457.3|Ighv5-15|ENSMUSG00000094134.3|immunoglobulin heavy variable 5-15	ENSMUST00000192877.2|Ighv5-15|ENSMUSG00000094134.3|immunoglobulin heavy variable 5-15
mm39_v1_chr9_+_62765362_62765420	0.0026340120871769634	Hoxc9	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr7_-_103289443_103289443	0.0025872239172558538	Hoxc9	ENSMUST00000058744.5|Olfr622|ENSMUSG00000050085.6|olfactory receptor 622
mm39_v1_chr14_+_53315909_53315973	0.002266624116898768	Hoxc9	ENSMUST00000103608.4|Trav14d-3-dv8|ENSMUSG00000094619.3|T cell receptor alpha variable 14D-3-DV8
mm39_v1_chr4_+_33924632_33924651	0.002221169730416801	Hoxc9	ENSMUST00000057188.7|Cnr1|ENSMUSG00000044288.7|cannabinoid receptor 1 (brain)
mm39_v1_chr4_-_91264670_91264714	0.0022167059321103145	Hoxc9	ENSMUST00000107109.9|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000107111.9|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1	ENSMUST00000107120.8|Elavl2|ENSMUSG00000008489.19|ELAV like RNA binding protein 1
mm39_v1_chr13_-_64237036_64237050	0.0021573281595137638	Hoxc9	ENSMUST00000222783.2|Hsd17b3|ENSMUSG00000033122.15|hydroxysteroid (17-beta) dehydrogenase 3
mm39_v1_chr13_-_64237011_64237022	0.0021206222225286175	Hoxc9	ENSMUST00000166224.8|Hsd17b3|ENSMUSG00000033122.15|hydroxysteroid (17-beta) dehydrogenase 3	ENSMUST00000222810.2|Hsd17b3|ENSMUSG00000033122.15|hydroxysteroid (17-beta) dehydrogenase 3
mm39_v1_chr15_-_48655329_48655459	0.0019953011539590067	Hoxc9	ENSMUST00000160658.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000100670.10|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3	ENSMUST00000162830.8|Csmd3|ENSMUSG00000022311.16|CUB and Sushi multiple domains 3
mm39_v1_chr19_+_22425565_22425596	0.0019399030948045245	Hoxc9	ENSMUST00000037901.14|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3
mm39_v1_chr2_-_42543069_42543088	0.0019264144330203249	Hoxc9	ENSMUST00000203080.3|Lrp1b|ENSMUSG00000049252.18|low density lipoprotein-related protein 1B
mm39_v1_chr2_-_42542938_42543005	0.001798798962085235	Hoxc9	ENSMUST00000204204.2|Lrp1b|ENSMUSG00000049252.18|low density lipoprotein-related protein 1B
mm39_v1_chr13_-_64236994_64237006	0.0017349834015558878	Hoxc9	ENSMUST00000039832.7|Hsd17b3|ENSMUSG00000033122.15|hydroxysteroid (17-beta) dehydrogenase 3
mm39_v1_chr13_-_25454058_25454077	0.0016807945032274528	Hoxc9	ENSMUST00000057866.13|Nrsn1|ENSMUSG00000048978.15|neurensin 1
mm39_v1_chr18_+_65715351_65715398	0.0015882723384831282	Hoxc9	ENSMUST00000235669.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000183319.8|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000236523.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000237886.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chrX_-_140257030_140257086	0.0015285643581146406	Hoxc9	ENSMUST00000101205.3|Col4a6|ENSMUSG00000031273.17|collagen, type IV, alpha 6
mm39_v1_chr12_-_46767619_46767642	0.00143540921890667	Hoxc9	ENSMUST00000219886.2|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chr15_-_89263790_89263821	0.0014238689934163945	Hoxc9	ENSMUST00000238996.2|Odf3b|ENSMUSG00000047394.10|outer dense fiber of sperm tails 3B
mm39_v1_chr13_-_78345932_78346049	0.0013942686864144855	Hoxc9	ENSMUST00000127137.3|Nr2f1|ENSMUSG00000069171.15|nuclear receptor subfamily 2, group F, member 1
mm39_v1_chr4_+_135870808_135870808	0.0010795677487239787	Hoxc9	ENSMUST00000008016.3|Id3|ENSMUSG00000007872.4|inhibitor of DNA binding 3
mm39_v1_chr18_+_65715156_65715346	0.0009895470502017582	Hoxc9	ENSMUST00000237553.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000237712.2|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532	ENSMUST00000182684.8|Zfp532|ENSMUSG00000042439.14|zinc finger protein 532
mm39_v1_chr17_-_29768531_29768575	0.0008872928026156418	Hoxc9	ENSMUST00000168339.3|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217	ENSMUST00000114683.10|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217	ENSMUST00000234620.2|Tmem217|ENSMUSG00000079580.10|transmembrane protein 217
mm39_v1_chr19_+_22425534_22425561	0.0008778323878017673	Hoxc9	ENSMUST00000235522.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000236372.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000238066.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000235780.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3	ENSMUST00000236804.2|Trpm3|ENSMUSG00000052387.17|transient receptor potential cation channel, subfamily M, member 3
mm39_v1_chr13_-_40891849_40891862	0.0006002238108437054	Hoxc9	ENSMUST00000223869.2|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr7_+_99384352_99384352	0.0003797369374954227	Hoxc9	ENSMUST00000098264.2|Olfr520|ENSMUSG00000073998.3|olfactory receptor 520
mm39_v1_chr6_-_55109960_55109999	0.00025008640428345313	Hoxc9	ENSMUST00000003568.15|Crhr2|ENSMUSG00000003476.17|corticotropin releasing hormone receptor 2
mm39_v1_chr2_-_38604503_38604554	0.00010285026154111703	Hoxc9	ENSMUST00000028084.5|Nr5a1|ENSMUSG00000026751.15|nuclear receptor subfamily 5, group A, member 1
mm39_v1_chrX_+_48552803_48552850	4.529479671531119e-05	Hoxc9	ENSMUST00000130558.8|Arhgap36|ENSMUSG00000036198.13|Rho GTPase activating protein 36
