mm39_v1_chr10_-_35587888_35587888	0.7198902146611685	Hoxd9	ENSMUST00000080898.4|Amd2|ENSMUSG00000063953.4|S-adenosylmethionine decarboxylase 2
mm39_v1_chr14_+_66043281_66043346	0.631365485072946	Hoxd9	ENSMUST00000022612.10|Pbk|ENSMUSG00000022033.10|PDZ binding kinase
mm39_v1_chr14_+_74973081_74973103	0.5872526666744798	Hoxd9	ENSMUST00000177283.8|Esd|ENSMUSG00000021996.17|esterase D/formylglutathione hydrolase
mm39_v1_chrX_-_133442596_133442649	0.5668586687828047	Hoxd9	ENSMUST00000054213.5|Timm8a1|ENSMUSG00000048007.5|translocase of inner mitochondrial membrane 8A1
mm39_v1_chrX_+_55493325_55493325	0.5434328014463643	Hoxd9	ENSMUST00000079663.7|Gm2174|ENSMUSG00000058932.7|predicted gene 2174
mm39_v1_chr2_-_151586063_151586125	0.4840820737977694	Hoxd9	ENSMUST00000109869.2|Psmf1|ENSMUSG00000032869.16|proteasome (prosome, macropain) inhibitor subunit 1
mm39_v1_chr9_-_64080161_64080201	0.46182390330589895	Hoxd9	ENSMUST00000176299.8|Zwilch|ENSMUSG00000032400.19|zwilch kinetochore protein	ENSMUST00000130127.8|Zwilch|ENSMUSG00000032400.19|zwilch kinetochore protein	ENSMUST00000176794.8|Zwilch|ENSMUSG00000032400.19|zwilch kinetochore protein	ENSMUST00000177045.8|Zwilch|ENSMUSG00000032400.19|zwilch kinetochore protein
mm39_v1_chr5_-_21087023_21087122	0.44174620379149543	Hoxd9	ENSMUST00000118174.8|Phtf2|ENSMUSG00000039987.16|putative homeodomain transcription factor 2
mm39_v1_chr12_+_117807224_117807250	0.4399506155860585	Hoxd9	ENSMUST00000021592.16|Cdca7l|ENSMUSG00000021175.16|cell division cycle associated 7 like
mm39_v1_chrX_+_41241049_41241072	0.4143395730437473	Hoxd9	ENSMUST00000128799.3|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr14_-_54855446_54855479	0.3937754093567997	Hoxd9	ENSMUST00000227257.2|Psmb5|ENSMUSG00000022193.8|proteasome (prosome, macropain) subunit, beta type 5	ENSMUST00000022803.6|Psmb5|ENSMUSG00000022193.8|proteasome (prosome, macropain) subunit, beta type 5
mm39_v1_chr11_+_23234644_23234669	0.3923278294074086	Hoxd9	ENSMUST00000150750.3|Xpo1|ENSMUSG00000020290.15|exportin 1
mm39_v1_chr3_-_115923098_115923113	0.38172613360710606	Hoxd9	ENSMUST00000196449.5|Vcam1|ENSMUSG00000027962.15|vascular cell adhesion molecule 1
mm39_v1_chr1_-_154975376_154975382	0.3768158769161323	Hoxd9	ENSMUST00000055322.6|Ier5|ENSMUSG00000056708.6|immediate early response 5
mm39_v1_chr6_+_18848600_18848692	0.35109185026692785	Hoxd9	ENSMUST00000201141.3|Lsm8|ENSMUSG00000044155.12|LSM8 homolog, U6 small nuclear RNA associated
mm39_v1_chr16_+_4559426_4559452	0.32862190079536296	Hoxd9	ENSMUST00000120232.8|Hmox2|ENSMUSG00000004070.16|heme oxygenase 2
mm39_v1_chr5_-_113458563_113458654	0.32533075536936157	Hoxd9	ENSMUST00000154248.8|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1	ENSMUST00000112325.8|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1	ENSMUST00000048112.13|Sgsm1|ENSMUSG00000042216.14|small G protein signaling modulator 1
mm39_v1_chr14_+_43951187_43951191	0.31969048886719775	Hoxd9	ENSMUST00000094051.6|Gm7324|ENSMUSG00000049235.9|predicted gene 7324
mm39_v1_chr16_-_65359406_65359533	0.3192610292379735	Hoxd9	ENSMUST00000231259.2|Chmp2b|ENSMUSG00000004843.8|charged multivesicular body protein 2B
mm39_v1_chr8_+_85583611_85583665	0.31007867725784805	Hoxd9	ENSMUST00000003906.13|Farsa|ENSMUSG00000003808.19|phenylalanyl-tRNA synthetase, alpha subunit	ENSMUST00000109754.2|Farsa|ENSMUSG00000003808.19|phenylalanyl-tRNA synthetase, alpha subunit
mm39_v1_chr5_-_69748126_69748171	0.2959638939162945	Hoxd9	ENSMUST00000166298.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2
mm39_v1_chr7_-_84328553_84328609	0.2956416786185699	Hoxd9	ENSMUST00000069537.3|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000207865.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000178385.9|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6	ENSMUST00000208782.2|Zfand6|ENSMUSG00000030629.16|zinc finger, AN1-type domain 6
mm39_v1_chr1_-_97689263_97689391	0.2914166603802882	Hoxd9	ENSMUST00000171129.8|Ppip5k2|ENSMUSG00000040648.16|diphosphoinositol pentakisphosphate kinase 2
mm39_v1_chr10_-_93727003_93727064	0.2893346294145416	Hoxd9	ENSMUST00000180840.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2
mm39_v1_chr9_-_60594742_60594955	0.26766873134237257	Hoxd9	ENSMUST00000114032.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000166168.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000132366.2|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49
mm39_v1_chr3_+_5815863_5815866	0.2648051697328399	Hoxd9	ENSMUST00000192045.2|Gm8797|ENSMUSG00000103034.2|predicted pseudogene 8797
mm39_v1_chr15_-_98832403_98832467	0.2595653084591286	Hoxd9	ENSMUST00000077577.8|Tuba1b|ENSMUSG00000023004.9|tubulin, alpha 1B
mm39_v1_chr2_-_84255602_84255755	0.2521123505905017	Hoxd9	ENSMUST00000074262.9|Calcrl|ENSMUSG00000059588.14|calcitonin receptor-like
mm39_v1_chr1_-_138103021_138103049	0.24524155250362473	Hoxd9	ENSMUST00000182755.8|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C	ENSMUST00000193650.2|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C	ENSMUST00000182283.8|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C
mm39_v1_chr6_+_57679621_57679644	0.24509942682194008	Hoxd9	ENSMUST00000050077.15|Lancl2|ENSMUSG00000062190.13|LanC (bacterial lantibiotic synthetase component C)-like 2
mm39_v1_chr11_-_80030735_80030788	0.23142170670139905	Hoxd9	ENSMUST00000136996.2|Tefm|ENSMUSG00000046909.10|transcription elongation factor, mitochondrial
mm39_v1_chrX_-_10083157_10083160	0.2239886459081814	Hoxd9	ENSMUST00000072393.9|Rpgr|ENSMUSG00000031174.18|retinitis pigmentosa GTPase regulator	ENSMUST00000044598.13|Rpgr|ENSMUSG00000031174.18|retinitis pigmentosa GTPase regulator	ENSMUST00000073392.11|Rpgr|ENSMUSG00000031174.18|retinitis pigmentosa GTPase regulator	ENSMUST00000115533.8|Rpgr|ENSMUSG00000031174.18|retinitis pigmentosa GTPase regulator	ENSMUST00000115532.2|Rpgr|ENSMUSG00000031174.18|retinitis pigmentosa GTPase regulator
mm39_v1_chr1_-_138102972_138103012	0.21859891843313806	Hoxd9	ENSMUST00000195533.6|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C	ENSMUST00000183301.8|Ptprc|ENSMUSG00000026395.17|protein tyrosine phosphatase, receptor type, C
mm39_v1_chr3_+_32490300_32490300	0.21695172080058595	Hoxd9	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr7_+_127399776_127399787	0.21558950529179202	Hoxd9	ENSMUST00000046863.12|Hsd3b7|ENSMUSG00000042289.12|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	ENSMUST00000206674.2|Hsd3b7|ENSMUSG00000042289.12|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	ENSMUST00000106272.8|Hsd3b7|ENSMUSG00000042289.12|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm39_v1_chr3_+_35808269_35808288	0.21503669805555975	Hoxd9	ENSMUST00000029257.15|Atp11b|ENSMUSG00000037400.18|ATPase, class VI, type 11B
mm39_v1_chr18_+_31922173_31922224	0.21383064249928982	Hoxd9	ENSMUST00000025106.5|Polr2d|ENSMUSG00000024258.5|polymerase (RNA) II (DNA directed) polypeptide D	ENSMUST00000234146.2|Polr2d|ENSMUSG00000024258.5|polymerase (RNA) II (DNA directed) polypeptide D
mm39_v1_chr3_+_103078971_103079041	0.19190214066492542	Hoxd9	ENSMUST00000005830.15|Bcas2|ENSMUSG00000005687.15|breast carcinoma amplified sequence 2
mm39_v1_chr5_+_136982100_136982260	0.17624668433026927	Hoxd9	ENSMUST00000111094.8|Fis1|ENSMUSG00000019054.14|fission, mitochondrial 1	ENSMUST00000111097.8|Fis1|ENSMUSG00000019054.14|fission, mitochondrial 1
mm39_v1_chr19_+_56536685_56536716	0.17478142395605534	Hoxd9	ENSMUST00000071423.7|Nhlrc2|ENSMUSG00000025078.10|NHL repeat containing 2
mm39_v1_chr7_+_120450406_120450417	0.16921196286895104	Hoxd9	ENSMUST00000143322.9|Eef2k|ENSMUSG00000035064.18|eukaryotic elongation factor-2 kinase	ENSMUST00000106488.3|Eef2k|ENSMUSG00000035064.18|eukaryotic elongation factor-2 kinase
mm39_v1_chr5_-_65650269_65650403	0.16863138139645234	Hoxd9	ENSMUST00000121661.8|Smim14|ENSMUSG00000037822.13|small integral membrane protein 14
mm39_v1_chr5_-_120950570_120950604	0.16343082387860733	Hoxd9	ENSMUST00000117193.8|Oas1c|ENSMUSG00000001166.18|2'-5' oligoadenylate synthetase 1C
mm39_v1_chr1_-_171854818_171854880	0.1626915956636705	Hoxd9	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr19_+_45433899_45433982	0.14880166156668073	Hoxd9	ENSMUST00000224478.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein
mm39_v1_chr13_+_93441447_93441786	0.13906189780750774	Hoxd9	ENSMUST00000109497.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109498.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000060490.11|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109492.9|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109496.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109495.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr7_+_89814713_89814756	0.12615542904827184	Hoxd9	ENSMUST00000207084.2|Picalm|ENSMUSG00000039361.12|phosphatidylinositol binding clathrin assembly protein
mm39_v1_chr19_-_56536443_56536480	0.1219700027469662	Hoxd9	ENSMUST00000182059.2|Dclre1a|ENSMUSG00000025077.14|DNA cross-link repair 1A
mm39_v1_chr9_-_78016302_78016352	0.11956632021854804	Hoxd9	ENSMUST00000001402.14|Fbxo9|ENSMUSG00000001366.15|f-box protein 9
mm39_v1_chrX_-_165992145_165992168	0.11862030923779764	Hoxd9	ENSMUST00000112176.8|Tmsb4x|ENSMUSG00000049775.17|thymosin, beta 4, X chromosome
mm39_v1_chr8_-_41469332_41469360	0.11609027302850156	Hoxd9	ENSMUST00000131965.2|Mtus1|ENSMUSG00000045636.17|mitochondrial tumor suppressor 1
mm39_v1_chr8_-_84976330_84976364	0.11444393957867403	Hoxd9	ENSMUST00000019506.9|D8Ertd738e|ENSMUSG00000019362.9|DNA segment, Chr 8, ERATO Doi 738, expressed
mm39_v1_chr3_+_32490525_32490525	0.1115893361843852	Hoxd9	ENSMUST00000108242.2|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr3_+_67799510_67799565	0.11147379671686182	Hoxd9	ENSMUST00000063263.5|Iqcj|ENSMUSG00000051777.7|IQ motif containing J	ENSMUST00000182006.4|Iqschfp|ENSMUSG00000102422.2|Iqcj and Schip1 fusion protein
mm39_v1_chrX_+_105626790_105626793	0.11123583485417993	Hoxd9	ENSMUST00000101296.9|Gm5127|ENSMUSG00000073010.10|predicted gene 5127	ENSMUST00000101297.4|Gm5127|ENSMUSG00000073010.10|predicted gene 5127
mm39_v1_chr19_-_57185988_57186063	0.1102162310224034	Hoxd9	ENSMUST00000099294.9|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr3_-_116505469_116505496	0.10984408537240511	Hoxd9	ENSMUST00000153108.6|Slc35a3|ENSMUSG00000027957.14|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm39_v1_chr10_-_129107354_129107354	0.10896030434469783	Hoxd9	ENSMUST00000204573.3|Olfr777|ENSMUSG00000062914.4|olfactory receptor 777
mm39_v1_chr1_-_128030148_128030223	0.10172802769214713	Hoxd9	ENSMUST00000086614.12|Zranb3|ENSMUSG00000036086.17|zinc finger, RAN-binding domain containing 3
mm39_v1_chr16_-_50151350_50151380	0.09963788641302869	Hoxd9	ENSMUST00000114488.8|Bbx|ENSMUSG00000022641.16|bobby sox HMG box containing
mm39_v1_chr15_+_6673167_6673187	0.09899015261358346	Hoxd9	ENSMUST00000163073.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr1_+_88128323_88128353	0.09780801887397907	Hoxd9	ENSMUST00000049289.9|Ugt1a2|ENSMUSG00000090171.2|UDP glucuronosyltransferase 1 family, polypeptide A2
mm39_v1_chr11_+_31823096_31823275	0.09763083393874965	Hoxd9	ENSMUST00000155278.2|Cpeb4|ENSMUSG00000020300.15|cytoplasmic polyadenylation element binding protein 4
mm39_v1_chr7_+_30264835_30264858	0.09752754556016023	Hoxd9	ENSMUST00000043850.14|Igflr1|ENSMUSG00000036826.15|IGF-like family receptor 1
mm39_v1_chr1_-_23948764_23948787	0.0966848278670412	Hoxd9	ENSMUST00000129254.8|Smap1|ENSMUSG00000026155.14|small ArfGAP 1
mm39_v1_chr19_-_56536646_56536696	0.09380261136718601	Hoxd9	ENSMUST00000182276.2|Dclre1a|ENSMUSG00000025077.14|DNA cross-link repair 1A
mm39_v1_chr18_+_42669322_42669358	0.09152200793307703	Hoxd9	ENSMUST00000236418.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr13_-_81859056_81859132	0.09105292674816148	Hoxd9	ENSMUST00000161920.2|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G	ENSMUST00000048993.12|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G
mm39_v1_chr1_-_128256048_128256063	0.08939503272195307	Hoxd9	ENSMUST00000073490.7|Lct|ENSMUSG00000026354.9|lactase
mm39_v1_chr1_+_55276336_55276414	0.08402763960771499	Hoxd9	ENSMUST00000061334.10|Mars2|ENSMUSG00000046994.10|methionine-tRNA synthetase 2 (mitochondrial)
mm39_v1_chr5_-_87572060_87572064	0.08082458884343545	Hoxd9	ENSMUST00000072818.6|Ugt2b38|ENSMUSG00000061906.6|UDP glucuronosyltransferase 2 family, polypeptide B38
mm39_v1_chr1_-_4430481_4430537	0.08040266999293914	Hoxd9	ENSMUST00000027032.6|Rp1|ENSMUSG00000025900.14|retinitis pigmentosa 1 (human)
mm39_v1_chr2_+_109522781_109522889	0.07650708785292105	Hoxd9	ENSMUST00000111050.10|Bdnf|ENSMUSG00000048482.15|brain derived neurotrophic factor
mm39_v1_chr5_+_117378510_117378529	0.07544737487187439	Hoxd9	ENSMUST00000111975.3|Taok3|ENSMUSG00000061288.14|TAO kinase 3
mm39_v1_chr4_+_109092459_109092459	0.07478830835010562	Hoxd9	ENSMUST00000106631.9|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr13_-_48746836_48746881	0.07020439901771199	Hoxd9	ENSMUST00000238995.2|Ptpdc1|ENSMUSG00000038042.12|protein tyrosine phosphatase domain containing 1
mm39_v1_chr13_-_21330037_21330037	0.06433950110365527	Hoxd9	ENSMUST00000216039.3|Olfr1368|ENSMUSG00000045474.8|olfactory receptor 1368
mm39_v1_chr7_-_108124272_108124272	0.06267557270852835	Hoxd9	ENSMUST00000216919.2|Olfr502|ENSMUSG00000058014.5|olfactory receptor 502
mm39_v1_chr19_+_34078333_34078399	0.06168690206942778	Hoxd9	ENSMUST00000025685.8|Lipm|ENSMUSG00000056078.7|lipase, family member M
mm39_v1_chr14_-_75991903_75992003	0.06166094859723167	Hoxd9	ENSMUST00000049168.9|Cog3|ENSMUSG00000034893.10|component of oligomeric golgi complex 3
mm39_v1_chr17_-_78991691_78991781	0.06032968073474484	Hoxd9	ENSMUST00000145480.2|Strn|ENSMUSG00000024077.16|striatin, calmodulin binding protein
mm39_v1_chr2_+_91357100_91357112	0.055190617121681974	Hoxd9	ENSMUST00000111338.10|Ckap5|ENSMUSG00000040549.17|cytoskeleton associated protein 5
mm39_v1_chr2_+_11176891_11176942	0.055095492281019356	Hoxd9	ENSMUST00000028118.9|Prkcq|ENSMUSG00000026778.14|protein kinase C, theta
mm39_v1_chrX_+_56257374_56257514	0.05251562392499096	Hoxd9	ENSMUST00000033466.2|Cd40lg|ENSMUSG00000031132.2|CD40 ligand
mm39_v1_chr19_+_46678336_46678382	0.049833490564504486	Hoxd9	ENSMUST00000074912.8|Borcs7|ENSMUSG00000062376.8|BLOC-1 related complex subunit 7
mm39_v1_chr3_-_49711706_49711758	0.046187285019586896	Hoxd9	ENSMUST00000191794.2|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr18_-_20995980_20995980	0.044658825021197134	Hoxd9	ENSMUST00000224530.2|Trappc8|ENSMUSG00000033382.16|trafficking protein particle complex 8
mm39_v1_chr2_+_85648823_85648823	0.043759061191153775	Hoxd9	ENSMUST00000214416.2|Olfr1018|ENSMUSG00000043892.4|olfactory receptor 1018
mm39_v1_chr4_+_109092610_109092610	0.04151529467026206	Hoxd9	ENSMUST00000106628.8|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr1_-_121260298_121260318	0.04114676929685088	Hoxd9	ENSMUST00000071064.13|Insig2|ENSMUSG00000003721.15|insulin induced gene 2
mm39_v1_chr4_+_5724305_5724357	0.04110741651552769	Hoxd9	ENSMUST00000108380.2|Fam110b|ENSMUSG00000049119.15|family with sequence similarity 110, member B
mm39_v1_chr2_-_88559941_88559941	0.04042686083163493	Hoxd9	ENSMUST00000099815.2|Olfr1197|ENSMUSG00000075119.3|olfactory receptor 1197
mm39_v1_chr6_-_131655849_131655849	0.04009634538532851	Hoxd9	ENSMUST00000076756.3|Tas2r106|ENSMUSG00000057754.3|taste receptor, type 2, member 106
mm39_v1_chr7_+_45271229_45271249	0.038733589348283595	Hoxd9	ENSMUST00000033100.5|Izumo1|ENSMUSG00000064158.7|izumo sperm-egg fusion 1
mm39_v1_chr16_-_75706161_75706200	0.0384878525878807	Hoxd9	ENSMUST00000114239.9|Samsn1|ENSMUSG00000022876.19|SAM domain, SH3 domain and nuclear localization signals, 1
mm39_v1_chr8_-_62576140_62576157	0.037943824759554844	Hoxd9	ENSMUST00000034052.14|Anxa10|ENSMUSG00000031635.15|annexin A10	ENSMUST00000034054.9|Anxa10|ENSMUSG00000031635.15|annexin A10
mm39_v1_chr2_-_111452417_111452417	0.0361733481346352	Hoxd9	ENSMUST00000099612.2|Olfr1297|ENSMUSG00000094858.4|olfactory receptor 1297
mm39_v1_chr9_-_16289527_16289527	0.034655352451387386	Hoxd9	ENSMUST00000082170.6|Fat3|ENSMUSG00000074505.7|FAT atypical cadherin 3
mm39_v1_chr5_-_86437119_86437167	0.03454274169922692	Hoxd9	ENSMUST00000196462.2|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c	ENSMUST00000059424.10|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c
mm39_v1_chr3_-_49711765_49711772	0.03439993944103333	Hoxd9	ENSMUST00000035931.13|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr9_-_51240201_51240229	0.03301781353999106	Hoxd9	ENSMUST00000039959.11|1810046K07Rik|ENSMUSG00000036027.14|RIKEN cDNA 1810046K07 gene	ENSMUST00000238450.3|1810046K07Rik|ENSMUSG00000036027.14|RIKEN cDNA 1810046K07 gene
mm39_v1_chr3_-_144555062_144555118	0.03264405339963295	Hoxd9	ENSMUST00000159989.2|Clca3b|ENSMUSG00000037033.10|chloride channel accessory 3B
mm39_v1_chr1_+_180158035_180158058	0.032616307671387484	Hoxd9	ENSMUST00000070181.7|Itpkb|ENSMUSG00000038855.11|inositol 1,4,5-trisphosphate 3-kinase B
mm39_v1_chr7_+_107529653_107529653	0.032355962436516644	Hoxd9	ENSMUST00000217618.3|Olfr473|ENSMUSG00000095212.5|olfactory receptor 473
mm39_v1_chr16_+_41353360_41353429	0.032118615783670604	Hoxd9	ENSMUST00000099761.10|Lsamp|ENSMUSG00000061080.12|limbic system-associated membrane protein
mm39_v1_chr19_-_57185861_57185893	0.03179923148690848	Hoxd9	ENSMUST00000111550.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr4_-_73869071_73869089	0.03162358166096453	Hoxd9	ENSMUST00000095023.2|2310002L09Rik|ENSMUSG00000028396.6|RIKEN cDNA 2310002L09 gene	ENSMUST00000030101.4|2310002L09Rik|ENSMUSG00000028396.6|RIKEN cDNA 2310002L09 gene
mm39_v1_chr7_+_108312527_108312527	0.030410404744885905	Hoxd9	ENSMUST00000209620.4|Olfr512|ENSMUSG00000056946.5|olfactory receptor 512	ENSMUST00000074730.4|Olfr512|ENSMUSG00000056946.5|olfactory receptor 512
mm39_v1_chrX_-_133652140_133652178	0.03032769243905569	Hoxd9	ENSMUST00000052431.12|Armcx6|ENSMUSG00000050394.15|armadillo repeat containing, X-linked 6
mm39_v1_chr12_+_84116099_84116099	0.029687496252284524	Hoxd9	ENSMUST00000046422.11|Acot5|ENSMUSG00000042540.13|acyl-CoA thioesterase 5	ENSMUST00000072505.5|Acot5|ENSMUSG00000042540.13|acyl-CoA thioesterase 5
mm39_v1_chr6_-_131667026_131667026	0.02868035232144261	Hoxd9	ENSMUST00000080619.3|Tas2r114|ENSMUSG00000063478.3|taste receptor, type 2, member 114
mm39_v1_chr2_+_83642910_83642987	0.02849020905350845	Hoxd9	ENSMUST00000051454.4|Fam171b|ENSMUSG00000048388.4|family with sequence similarity 171, member B
mm39_v1_chr2_+_88015223_88015223	0.02770532181903697	Hoxd9	ENSMUST00000079599.4|Olfr1168|ENSMUSG00000061342.6|olfactory receptor 1168
mm39_v1_chr6_+_132844971_132844971	0.027663094502669384	Hoxd9	ENSMUST00000082014.2|Tas2r110|ENSMUSG00000062952.2|taste receptor, type 2, member 110
mm39_v1_chr14_+_50630215_50630215	0.026447468188447523	Hoxd9	ENSMUST00000058965.4|Olfr736|ENSMUSG00000047716.5|olfactory receptor 736
mm39_v1_chr10_+_73782857_73782903	0.026285709147351625	Hoxd9	ENSMUST00000191709.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15	ENSMUST00000193739.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15	ENSMUST00000195531.6|Pcdh15|ENSMUSG00000052613.17|protocadherin 15
mm39_v1_chr16_-_58850641_58850654	0.026041709051925627	Hoxd9	ENSMUST00000216415.2|Olfr186|ENSMUSG00000047960.5|olfactory receptor 186	ENSMUST00000206463.3|Olfr186|ENSMUSG00000047960.5|olfactory receptor 186
mm39_v1_chrX_-_133652080_133652139	0.02590886520193952	Hoxd9	ENSMUST00000113194.8|Armcx6|ENSMUSG00000050394.15|armadillo repeat containing, X-linked 6
mm39_v1_chr2_+_87574098_87574098	0.02575556751996055	Hoxd9	ENSMUST00000214723.2|Olfr1140|ENSMUSG00000068817.6|olfactory receptor 1140
mm39_v1_chrX_+_151909893_151909893	0.025546277603205783	Hoxd9	ENSMUST00000163801.2|Foxr2|ENSMUSG00000071665.11|forkhead box R2
mm39_v1_chr19_-_57185928_57185969	0.025487345264013257	Hoxd9	ENSMUST00000111544.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr16_-_22847808_22847826	0.0254340312159106	Hoxd9	ENSMUST00000115349.9|Kng2|ENSMUSG00000060459.15|kininogen 2
mm39_v1_chrX_+_94942639_94942639	0.025185636272344394	Hoxd9	ENSMUST00000082183.8|Zc3h12b|ENSMUSG00000035045.18|zinc finger CCCH-type containing 12B
mm39_v1_chr6_+_108771840_108771885	0.025008116461724055	Hoxd9	ENSMUST00000204483.2|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr5_-_87288177_87288203	0.024903554355058238	Hoxd9	ENSMUST00000067790.7|Ugt2b5|ENSMUSG00000054630.8|UDP glucuronosyltransferase 2 family, polypeptide B5
mm39_v1_chr10_+_97482946_97482975	0.02473024791987341	Hoxd9	ENSMUST00000105285.4|Epyc|ENSMUSG00000019936.11|epiphycan
mm39_v1_chr2_-_87467879_87467879	0.024269310490563724	Hoxd9	ENSMUST00000216082.2|Olfr1132|ENSMUSG00000068818.6|olfactory receptor 1132
mm39_v1_chr2_-_111927126_111927126	0.024127069109600534	Hoxd9	ENSMUST00000207976.4|Olfr1314|ENSMUSG00000074945.4|olfactory receptor 1314
mm39_v1_chr14_-_50322136_50322136	0.024067292097246968	Hoxd9	ENSMUST00000072370.3|Olfr726|ENSMUSG00000060523.6|olfactory receptor 726
mm39_v1_chr2_-_87570322_87570322	0.02406514335117687	Hoxd9	ENSMUST00000214573.2|Olfr1138|ENSMUSG00000075149.3|olfactory receptor 1138
mm39_v1_chr5_-_3697806_3698008	0.023891815177428184	Hoxd9	ENSMUST00000119783.2|Gatad1|ENSMUSG00000007415.16|GATA zinc finger domain containing 1	ENSMUST00000007559.15|Gatad1|ENSMUSG00000007415.16|GATA zinc finger domain containing 1
mm39_v1_chr5_+_88523967_88523967	0.02375324702385312	Hoxd9	ENSMUST00000073363.2|Amtn|ENSMUSG00000029282.4|amelotin
mm39_v1_chr16_-_19385631_19385631	0.02364696737841794	Hoxd9	ENSMUST00000090062.2|Olfr169|ENSMUSG00000068535.3|olfactory receptor 169
mm39_v1_chrX_+_9751861_9751861	0.023587392014718555	Hoxd9	ENSMUST00000067529.9|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5	ENSMUST00000086165.4|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5
mm39_v1_chr2_-_86216760_86216760	0.023408050576555386	Hoxd9	ENSMUST00000102631.2|Olfr1058|ENSMUSG00000075186.5|olfactory receptor 1058
mm39_v1_chr12_-_41536430_41536430	0.022458967415645528	Hoxd9	ENSMUST00000043884.6|Lrrn3|ENSMUSG00000036295.6|leucine rich repeat protein 3, neuronal
mm39_v1_chr2_-_37537224_37537297	0.022091834824224957	Hoxd9	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr9_-_38577138_38577138	0.02208815133862137	Hoxd9	ENSMUST00000076542.2|Olfr917|ENSMUSG00000063225.2|olfactory receptor 917
mm39_v1_chr10_+_129336682_129336682	0.022007154520912356	Hoxd9	ENSMUST00000056002.5|Olfr790|ENSMUSG00000044025.7|olfactory receptor 790	ENSMUST00000218901.2|Olfr790|ENSMUSG00000044025.7|olfactory receptor 790
mm39_v1_chr2_+_85612365_85612365	0.021995537259056893	Hoxd9	ENSMUST00000215945.2|Olfr1015|ENSMUSG00000033850.6|olfactory receptor 1015
mm39_v1_chr2_+_65499097_65499113	0.021501963315219672	Hoxd9	ENSMUST00000200829.4|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha
mm39_v1_chr2_-_86705146_86705146	0.020839031460179253	Hoxd9	ENSMUST00000130722.3|Olfr1096|ENSMUSG00000086338.3|olfactory receptor 1096
mm39_v1_chr15_+_91722524_91722539	0.020806721529186924	Hoxd9	ENSMUST00000109276.8|Smgc|ENSMUSG00000047295.17|submandibular gland protein C	ENSMUST00000088555.10|Smgc|ENSMUSG00000047295.17|submandibular gland protein C	ENSMUST00000100293.9|Smgc|ENSMUSG00000047295.17|submandibular gland protein C	ENSMUST00000239545.1|ENSMUSG00000118670.1|ENSMUSG00000118670.1|mucin 19	ENSMUST00000126508.8|Smgc|ENSMUSG00000047295.17|submandibular gland protein C
mm39_v1_chr2_-_85590718_85590718	0.020786447034907056	Hoxd9	ENSMUST00000099916.2|Olfr1012|ENSMUSG00000075210.5|olfactory receptor 1012
mm39_v1_chr9_-_39515420_39515699	0.02037989474387828	Hoxd9	ENSMUST00000042485.11|AW551984|ENSMUSG00000038112.16|expressed sequence AW551984	ENSMUST00000141370.8|AW551984|ENSMUSG00000038112.16|expressed sequence AW551984
mm39_v1_chr2_-_88928307_88928307	0.020345540498765368	Hoxd9	ENSMUST00000099789.5|Olfr1220|ENSMUSG00000101480.4|olfactory receptor 1220
mm39_v1_chr19_-_12300427_12300427	0.019472454285914504	Hoxd9	ENSMUST00000052558.4|Olfr1437|ENSMUSG00000096436.4|olfactory receptor 1437
mm39_v1_chr3_-_75177378_75177392	0.01871559640907762	Hoxd9	ENSMUST00000039047.5|Serpini2|ENSMUSG00000034139.5|serine (or cysteine) peptidase inhibitor, clade I, member 2
mm39_v1_chr9_+_38240788_38240788	0.0185642070564298	Hoxd9	ENSMUST00000071449.3|Olfr25|ENSMUSG00000058270.4|olfactory receptor 25
mm39_v1_chr13_-_32960379_32960415	0.018255028424165577	Hoxd9	ENSMUST00000230119.2|Mylk4|ENSMUSG00000044951.18|myosin light chain kinase family, member 4
mm39_v1_chr2_-_87466089_87466089	0.018079459383145365	Hoxd9	ENSMUST00000090711.3|Olfr1132|ENSMUSG00000068818.6|olfactory receptor 1132
mm39_v1_chr7_+_107501834_107501834	0.017812115060761524	Hoxd9	ENSMUST00000210420.2|Olfr472|ENSMUSG00000073893.7|olfactory receptor 472
mm39_v1_chr2_-_76700830_76700955	0.017536704243294572	Hoxd9	ENSMUST00000138542.2|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr12_-_118265103_118265162	0.01719574291429222	Hoxd9	ENSMUST00000222314.2|Sp4|ENSMUSG00000025323.11|trans-acting transcription factor 4	ENSMUST00000026367.11|Sp4|ENSMUSG00000025323.11|trans-acting transcription factor 4
mm39_v1_chr6_+_41095752_41095785	0.017050465561445426	Hoxd9	ENSMUST00000103269.3|Trbv12-2|ENSMUSG00000094525.3|T cell receptor beta, variable 12-2
mm39_v1_chr7_+_107413787_107413787	0.016465618371506258	Hoxd9	ENSMUST00000084756.2|Olfr467|ENSMUSG00000066242.4|olfactory receptor 467
mm39_v1_chr16_+_84312257_84312257	0.016390269994254376	Hoxd9	ENSMUST00000210306.2|A730009L09Rik|ENSMUSG00000110358.2|RIKEN cDNA A730009L09 gene
mm39_v1_chr5_-_120950549_120950560	0.016301368824878888	Hoxd9	ENSMUST00000125547.2|Oas1c|ENSMUSG00000001166.18|2'-5' oligoadenylate synthetase 1C
mm39_v1_chr9_+_38120508_38120508	0.016246646433352042	Hoxd9	ENSMUST00000212815.2|Olfr893|ENSMUSG00000093901.4|olfactory receptor 893
mm39_v1_chr5_-_87402659_87402677	0.01615547065501943	Hoxd9	ENSMUST00000075858.4|Ugt2b37|ENSMUSG00000057425.4|UDP glucuronosyltransferase 2 family, polypeptide B37
mm39_v1_chr3_-_14843512_14843526	0.015826250197149103	Hoxd9	ENSMUST00000094365.11|Car1|ENSMUSG00000027556.16|carbonic anhydrase 1
mm39_v1_chr7_+_107916103_107916103	0.015816931381226744	Hoxd9	ENSMUST00000053179.2|Olfr491|ENSMUSG00000094612.4|olfactory receptor 491
mm39_v1_chr18_+_52748978_52749068	0.015780573345718037	Hoxd9	ENSMUST00000072666.4|Zfp474|ENSMUSG00000046886.7|zinc finger protein 474	ENSMUST00000209270.2|Zfp474|ENSMUSG00000046886.7|zinc finger protein 474
mm39_v1_chr7_-_107724503_107724503	0.0157093895129288	Hoxd9	ENSMUST00000210881.2|Olfr484|ENSMUSG00000110171.3|olfactory receptor 484
mm39_v1_chr7_+_44033520_44033578	0.015407843253455051	Hoxd9	ENSMUST00000118962.8|Syt3|ENSMUSG00000030731.14|synaptotagmin III	ENSMUST00000118831.8|Syt3|ENSMUSG00000030731.14|synaptotagmin III
mm39_v1_chr5_+_18167547_18167547	0.01501391741149428	Hoxd9	ENSMUST00000030561.9|Gnat3|ENSMUSG00000028777.9|guanine nucleotide binding protein, alpha transducing 3
mm39_v1_chr10_-_23869379_23869379	0.014975474690433917	Hoxd9	ENSMUST00000078532.3|Taar7a|ENSMUSG00000095647.2|trace amine-associated receptor 7A
mm39_v1_chr6_-_98319684_98319715	0.0149346933393432	Hoxd9	ENSMUST00000164491.3|Mdfic2|ENSMUSG00000090667.3|MyoD family inhibitor domain containing 2
mm39_v1_chr17_-_40630096_40630099	0.014895135390422068	Hoxd9	ENSMUST00000026498.5|Crisp1|ENSMUSG00000025431.5|cysteine-rich secretory protein 1
mm39_v1_chr11_+_67061908_67062046	0.014792163131080466	Hoxd9	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr17_+_14087827_14087878	0.014653933622382773	Hoxd9	ENSMUST00000239324.2|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor
mm39_v1_chr7_-_106473450_106473450	0.014307947292522268	Hoxd9	ENSMUST00000060879.6|Olfr705|ENSMUSG00000109058.4|olfactory receptor 705
mm39_v1_chr11_-_99996452_99996471	0.014159544310393018	Hoxd9	ENSMUST00000107416.3|Krt36|ENSMUSG00000020916.9|keratin 36
mm39_v1_chr7_+_102576837_102576837	0.013983016486012084	Hoxd9	ENSMUST00000098214.2|Olfr572|ENSMUSG00000073963.4|olfactory receptor 572
mm39_v1_chr16_-_78887971_78887995	0.013969075289966023	Hoxd9	ENSMUST00000023566.11|Tmprss15|ENSMUSG00000022857.14|transmembrane protease, serine 15	ENSMUST00000060402.6|Tmprss15|ENSMUSG00000022857.14|transmembrane protease, serine 15
mm39_v1_chr7_+_11910120_11910120	0.013756326112731275	Hoxd9	ENSMUST00000062811.6|Vmn1r79|ENSMUSG00000096735.4|vomeronasal 1 receptor 79
mm39_v1_chr2_+_111311164_111311164	0.01375418362710433	Hoxd9	ENSMUST00000120021.5|Olfr1289|ENSMUSG00000061195.9|olfactory receptor 1289
mm39_v1_chrX_-_48886577_48886632	0.01363407810274443	Hoxd9	ENSMUST00000033442.14|Igsf1|ENSMUSG00000031111.17|immunoglobulin superfamily, member 1	ENSMUST00000114891.2|Igsf1|ENSMUSG00000031111.17|immunoglobulin superfamily, member 1
mm39_v1_chr9_-_39484610_39484610	0.013619954182297023	Hoxd9	ENSMUST00000079178.3|Olfr959|ENSMUSG00000059366.4|olfactory receptor 959
mm39_v1_chr1_-_28819331_28819333	0.013370234568882285	Hoxd9	ENSMUST00000059937.5|Gm597|ENSMUSG00000048411.5|predicted gene 597
mm39_v1_chr17_+_38082519_38082519	0.012809809759370695	Hoxd9	ENSMUST00000119082.2|Olfr122|ENSMUSG00000083947.6|olfactory receptor 122
mm39_v1_chr12_+_31488208_31488226	0.01279677371032226	Hoxd9	ENSMUST00000001254.6|Slc26a3|ENSMUSG00000001225.13|solute carrier family 26, member 3
mm39_v1_chr10_+_115405891_115405927	0.012736174395353305	Hoxd9	ENSMUST00000173620.2|A930009A15Rik|ENSMUSG00000092210.2|RIKEN cDNA A930009A15 gene
mm39_v1_chr17_+_31652029_31652045	0.012449049520144863	Hoxd9	ENSMUST00000136384.9|Pde9a|ENSMUSG00000041119.13|phosphodiesterase 9A
mm39_v1_chr14_-_123151162_123151176	0.012413041650918484	Hoxd9	ENSMUST00000160401.8|Ggact|ENSMUSG00000041625.16|gamma-glutamylamine cyclotransferase
mm39_v1_chr16_+_14407073_14407073	0.012363292498783745	Hoxd9	ENSMUST00000100165.4|A630010A05Rik|ENSMUSG00000075395.12|RIKEN cDNA A630010A05 gene
mm39_v1_chr19_+_13142380_13142380	0.012275454190163274	Hoxd9	ENSMUST00000053772.4|Olfr1461|ENSMUSG00000045883.6|olfactory receptor 1461
mm39_v1_chr7_+_107702486_107702486	0.012223244877208852	Hoxd9	ENSMUST00000104917.4|Olfr483|ENSMUSG00000078118.6|olfactory receptor 483
mm39_v1_chr3_-_144511566_144511566	0.01187703702061508	Hoxd9	ENSMUST00000199029.2|Clca3a2|ENSMUSG00000028262.14|chloride channel accessory 3A2
mm39_v1_chr6_+_67993691_67993702	0.01159030039177737	Hoxd9	ENSMUST00000103314.3|Igkv1-122|ENSMUSG00000095497.3|immunoglobulin kappa chain variable 1-122
mm39_v1_chr11_-_55498559_55498650	0.011557159850196227	Hoxd9	ENSMUST00000108853.8|Glra1|ENSMUSG00000000263.16|glycine receptor, alpha 1 subunit	ENSMUST00000075603.5|Glra1|ENSMUSG00000000263.16|glycine receptor, alpha 1 subunit
mm39_v1_chr2_-_63014514_63014539	0.011076234511967993	Hoxd9	ENSMUST00000112452.2|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr17_+_31652073_31652131	0.011003754423190825	Hoxd9	ENSMUST00000237363.2|Pde9a|ENSMUSG00000041119.13|phosphodiesterase 9A
mm39_v1_chr2_+_88389795_88389795	0.01086861398643217	Hoxd9	ENSMUST00000090701.5|Olfr1188|ENSMUSG00000068809.5|olfactory receptor 1188
mm39_v1_chr4_-_112291169_112291190	0.010824399015583666	Hoxd9	ENSMUST00000058605.3|Skint9|ENSMUSG00000049972.5|selection and upkeep of intraepithelial T cells 9
mm39_v1_chr16_-_58941421_58941432	0.010773196760953745	Hoxd9	ENSMUST00000213228.2|Olfr194|ENSMUSG00000063020.3|olfactory receptor 194	ENSMUST00000216519.2|Olfr194|ENSMUSG00000063020.3|olfactory receptor 194
mm39_v1_chr9_-_38930915_38930915	0.010577385829953139	Hoxd9	ENSMUST00000073671.3|Olfr146|ENSMUSG00000058820.4|olfactory receptor 146
mm39_v1_chr10_-_18890281_18890337	0.010561041247263744	Hoxd9	ENSMUST00000146388.2|Tnfaip3|ENSMUSG00000019850.12|tumor necrosis factor, alpha-induced protein 3
mm39_v1_chr3_+_113824181_113824220	0.010484581695268322	Hoxd9	ENSMUST00000123619.8|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1	ENSMUST00000092155.12|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1
mm39_v1_chr17_-_37935524_37935524	0.010482912089738828	Hoxd9	ENSMUST00000072265.3|Olfr116|ENSMUSG00000061336.4|olfactory receptor 116
mm39_v1_chr10_+_23875837_23875837	0.010407937875636071	Hoxd9	ENSMUST00000092658.2|Taar7b|ENSMUSG00000095171.2|trace amine-associated receptor 7B
mm39_v1_chr2_-_89983396_89983435	0.010150729375787291	Hoxd9	ENSMUST00000215578.2|Olfr1270|ENSMUSG00000075065.6|olfactory receptor 1270	ENSMUST00000216354.2|Olfr1270|ENSMUSG00000075065.6|olfactory receptor 1270	ENSMUST00000217139.2|Olfr1270|ENSMUSG00000075065.6|olfactory receptor 1270	ENSMUST00000213946.3|Olfr1270|ENSMUSG00000075065.6|olfactory receptor 1270	ENSMUST00000215975.3|Olfr1270|ENSMUSG00000075065.6|olfactory receptor 1270
mm39_v1_chr9_+_38384041_38384041	0.010125498666950138	Hoxd9	ENSMUST00000051111.3|Olfr905|ENSMUSG00000096794.3|olfactory receptor 905
mm39_v1_chr16_+_22739028_22739066	0.010124267015680933	Hoxd9	ENSMUST00000232097.2|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr12_-_118930130_118930156	0.010088884305676648	Hoxd9	ENSMUST00000035515.5|Abcb5|ENSMUSG00000072791.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
mm39_v1_chr15_+_91722458_91722468	0.01001321051327555	Hoxd9	ENSMUST00000109277.8|Smgc|ENSMUSG00000047295.17|submandibular gland protein C
mm39_v1_chr2_-_85269581_85269581	0.010002532231896422	Hoxd9	ENSMUST00000099924.3|Olfr995|ENSMUSG00000075218.4|olfactory receptor 995
mm39_v1_chr15_+_16778187_16778187	0.009975757084100765	Hoxd9	ENSMUST00000026432.8|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr1_+_167426019_167426049	0.009973933766741803	Hoxd9	ENSMUST00000111386.8|Rxrg|ENSMUSG00000015843.11|retinoid X receptor gamma	ENSMUST00000111384.8|Rxrg|ENSMUSG00000015843.11|retinoid X receptor gamma
mm39_v1_chr9_+_43222104_43222145	0.009883603904842792	Hoxd9	ENSMUST00000034511.7|Trim29|ENSMUSG00000032013.7|tripartite motif-containing 29
mm39_v1_chr18_-_84854841_84854841	0.009845179479292981	Hoxd9	ENSMUST00000236689.2|Gm17266|ENSMUSG00000117781.2|predicted gene, 17266
mm39_v1_chr2_+_85698938_85698938	0.009782154843528361	Hoxd9	ENSMUST00000054736.4|Olfr1022|ENSMUSG00000057761.2|olfactory receptor 1022
mm39_v1_chr9_+_39305089_39305089	0.00972060392969385	Hoxd9	ENSMUST00000078531.2|Olfr951|ENSMUSG00000094269.3|olfactory receptor 951
mm39_v1_chr10_+_23952398_23952398	0.009694050007576034	Hoxd9	ENSMUST00000051133.6|Taar8a|ENSMUSG00000096442.2|trace amine-associated receptor 8A
mm39_v1_chr19_+_12238396_12238527	0.009679787323896898	Hoxd9	ENSMUST00000207969.4|Olfr235|ENSMUSG00000060049.6|olfactory receptor 235	ENSMUST00000214638.3|Olfr235|ENSMUSG00000060049.6|olfactory receptor 235	ENSMUST00000215407.3|Olfr235|ENSMUSG00000060049.6|olfactory receptor 235	ENSMUST00000214613.3|Olfr235|ENSMUSG00000060049.6|olfactory receptor 235
mm39_v1_chr8_-_21412072_21412101	0.00931967013613799	Hoxd9	ENSMUST00000095430.4|Gm6040|ENSMUSG00000071165.4|predicted gene 6040
mm39_v1_chr10_+_78711374_78711374	0.009199065521296346	Hoxd9	ENSMUST00000078414.8|Olfr1355|ENSMUSG00000062873.8|olfactory receptor 1355
mm39_v1_chr14_+_50770871_50770871	0.009091600128409151	Hoxd9	ENSMUST00000071294.3|Olfr743|ENSMUSG00000094285.3|olfactory receptor 743
mm39_v1_chr11_+_67061837_67061866	0.009038786820824103	Hoxd9	ENSMUST00000170159.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr7_+_103246525_103246525	0.008630876919191108	Hoxd9	ENSMUST00000098197.2|Olfr618|ENSMUSG00000073945.3|olfactory receptor 618
mm39_v1_chr17_+_37982916_37982916	0.00854328325064973	Hoxd9	ENSMUST00000122036.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr17_+_38646050_38646050	0.008361353355167633	Hoxd9	ENSMUST00000077203.3|Olfr136|ENSMUSG00000096840.4|olfactory receptor 136
mm39_v1_chr4_+_114020581_114020630	0.008043939078980064	Hoxd9	ENSMUST00000079915.10|Skint11|ENSMUSG00000057977.11|selection and upkeep of intraepithelial T cells 11	ENSMUST00000164297.8|Skint11|ENSMUSG00000057977.11|selection and upkeep of intraepithelial T cells 11
mm39_v1_chr12_-_113589576_113589657	0.008021439110700905	Hoxd9	ENSMUST00000103446.2|Ighv5-6|ENSMUSG00000094951.2|immunoglobulin heavy variable 5-6
mm39_v1_chr14_+_53859114_53859201	0.007806869328537705	Hoxd9	ENSMUST00000103657.6|Trav12-3|ENSMUSG00000095958.4|T cell receptor alpha variable 12-3
mm39_v1_chr9_-_19478669_19478678	0.007788898473580143	Hoxd9	ENSMUST00000212872.2|Olfr854|ENSMUSG00000095667.3|olfactory receptor 854	ENSMUST00000072419.3|Olfr854|ENSMUSG00000095667.3|olfactory receptor 854
mm39_v1_chr2_-_86470069_86470069	0.007738549735339452	Hoxd9	ENSMUST00000216851.2|Olfr1084|ENSMUSG00000110804.2|olfactory receptor 1084
mm39_v1_chr17_+_37535982_37535982	0.007728586506033876	Hoxd9	ENSMUST00000078209.4|Olfr96|ENSMUSG00000064121.5|olfactory receptor 96
mm39_v1_chr13_-_99121070_99121079	0.007726733481269608	Hoxd9	ENSMUST00000054425.7|H2bl1|ENSMUSG00000045022.7|H2B.L histone variant 1
mm39_v1_chr13_-_21823691_21823691	0.007644141416406267	Hoxd9	ENSMUST00000043081.3|Olfr11|ENSMUSG00000036658.5|olfactory receptor 11
mm39_v1_chr15_-_37459570_37459650	0.007291018727892016	Hoxd9	ENSMUST00000119730.8|Ncald|ENSMUSG00000051359.16|neurocalcin delta	ENSMUST00000120746.8|Ncald|ENSMUSG00000051359.16|neurocalcin delta
mm39_v1_chr7_+_105053775_105053829	0.007168295784589164	Hoxd9	ENSMUST00000033187.6|Cnga4|ENSMUSG00000030897.6|cyclic nucleotide gated channel alpha 4	ENSMUST00000210344.2|Cnga4|ENSMUSG00000030897.6|cyclic nucleotide gated channel alpha 4
mm39_v1_chr11_-_4390745_4390745	0.007056136963700802	Hoxd9	ENSMUST00000109948.8|Hormad2|ENSMUSG00000020419.12|HORMA domain containing 2
mm39_v1_chr19_-_10582672_10582771	0.006684496961891203	Hoxd9	ENSMUST00000236478.2|Tkfc|ENSMUSG00000034371.10|triokinase, FMN cyclase	ENSMUST00000236950.2|Tkfc|ENSMUSG00000034371.10|triokinase, FMN cyclase
mm39_v1_chr8_-_73188887_73189000	0.006622528906882505	Hoxd9	ENSMUST00000109974.2|Calr3|ENSMUSG00000019732.15|calreticulin 3
mm39_v1_chr11_+_58556387_58556387	0.006500653482179058	Hoxd9	ENSMUST00000072030.4|Olfr322|ENSMUSG00000063549.5|olfactory receptor 322
mm39_v1_chr14_+_52687850_52687850	0.006354658879810478	Hoxd9	ENSMUST00000045066.3|Olfr1509|ENSMUSG00000035626.5|olfactory receptor 1509
mm39_v1_chr5_-_69699932_69699963	0.0062353750213165705	Hoxd9	ENSMUST00000202423.2|Yipf7|ENSMUSG00000029158.10|Yip1 domain family, member 7
mm39_v1_chr15_+_11000802_11000823	0.005976791659540318	Hoxd9	ENSMUST00000117100.4|Slc45a2|ENSMUSG00000022243.11|solute carrier family 45, member 2
mm39_v1_chr7_+_107679062_107679062	0.005958236706052425	Hoxd9	ENSMUST00000213601.2|Olfr481|ENSMUSG00000054236.7|olfactory receptor 481
mm39_v1_chrX_+_113384008_113384051	0.005832681141149526	Hoxd9	ENSMUST00000113371.8|Klhl4|ENSMUSG00000025597.14|kelch-like 4	ENSMUST00000040504.12|Klhl4|ENSMUSG00000025597.14|kelch-like 4
mm39_v1_chr7_+_107966697_107966697	0.005774287015083433	Hoxd9	ENSMUST00000210291.2|Olfr494|ENSMUSG00000109631.2|olfactory receptor 494
mm39_v1_chr4_-_36056726_36056726	0.005749647301295098	Hoxd9	ENSMUST00000108124.4|Lingo2|ENSMUSG00000045083.15|leucine rich repeat and Ig domain containing 2
mm39_v1_chr16_+_29884153_29884169	0.005639447408213866	Hoxd9	ENSMUST00000023171.8|Hes1|ENSMUSG00000022528.9|hes family bHLH transcription factor 1
mm39_v1_chr17_+_38459392_38459392	0.005284298677222346	Hoxd9	ENSMUST00000113636.2|Olfr133|ENSMUSG00000063240.7|olfactory receptor 133
mm39_v1_chr9_+_19719616_19719616	0.005178977370019259	Hoxd9	ENSMUST00000086480.2|Olfr859|ENSMUSG00000095448.4|olfactory receptor 859
mm39_v1_chr6_+_30512285_30512318	0.005019848947826351	Hoxd9	ENSMUST00000031798.14|Ssmem1|ENSMUSG00000029784.14|serine-rich single-pass membrane protein 1
mm39_v1_chr7_-_12370061_12370061	0.0049168108580765766	Hoxd9	ENSMUST00000086210.6|Vmn2r54|ENSMUSG00000096593.3|vomeronasal 2, receptor 54
mm39_v1_chr6_-_41291634_41291649	0.004815540509553788	Hoxd9	ENSMUST00000064324.12|Try5|ENSMUSG00000036938.18|trypsin 5
mm39_v1_chr10_+_90412114_90412379	0.004449035285905725	Hoxd9	ENSMUST00000182427.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182053.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182113.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr8_-_68574179_68574289	0.004447739849974325	Hoxd9	ENSMUST00000178529.2|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr14_-_56137697_56137717	0.004395493242688087	Hoxd9	ENSMUST00000111325.5|Sdr39u1|ENSMUSG00000022223.10|short chain dehydrogenase/reductase family 39U, member 1
mm39_v1_chr7_+_104587735_104587735	0.004377819783677267	Hoxd9	ENSMUST00000098164.2|Olfr669|ENSMUSG00000073916.4|olfactory receptor 669
mm39_v1_chr2_+_111158766_111158766	0.004328315004200247	Hoxd9	ENSMUST00000090326.2|Olfr1281|ENSMUSG00000095156.3|olfactory receptor 1281
mm39_v1_chr5_-_86345729_86345760	0.004227468483396278	Hoxd9	ENSMUST00000031172.9|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor	ENSMUST00000113372.2|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor
mm39_v1_chr2_-_111395856_111395856	0.00403917120484396	Hoxd9	ENSMUST00000207786.3|Olfr1295|ENSMUSG00000108919.4|olfactory receptor 1295
mm39_v1_chr10_-_111996226_111996235	0.004034592979372879	Hoxd9	ENSMUST00000220085.2|Glipr1l3|ENSMUSG00000112611.2|GLI pathogenesis-related 1 like 3
mm39_v1_chr12_-_46767619_46767642	0.003988194017316448	Hoxd9	ENSMUST00000219886.2|Nova1|ENSMUSG00000021047.8|NOVA alternative splicing regulator 1
mm39_v1_chrX_+_111513971_111513971	0.0038075609579412907	Hoxd9	ENSMUST00000071814.13|Zfp711|ENSMUSG00000025529.15|zinc finger protein 711
mm39_v1_chr1_+_106908709_106908715	0.0036485777137840484	Hoxd9	ENSMUST00000027564.8|Serpinb13|ENSMUSG00000048775.11|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 13
mm39_v1_chr7_-_104609937_104609937	0.0035865133039961437	Hoxd9	ENSMUST00000050482.3|Olfr670|ENSMUSG00000044705.4|olfactory receptor 670
mm39_v1_chr5_-_104125192_104125219	0.0034264696580091005	Hoxd9	ENSMUST00000120320.8|Hsd17b13|ENSMUSG00000034528.16|hydroxysteroid (17-beta) dehydrogenase 13
mm39_v1_chr11_+_49170977_49170977	0.003398949989686792	Hoxd9	ENSMUST00000078932.2|Olfr1393|ENSMUSG00000059864.3|olfactory receptor 1393
mm39_v1_chr2_+_111327525_111327525	0.0031945784553359005	Hoxd9	ENSMUST00000121345.4|Olfr1291-ps1|ENSMUSG00000108891.5|olfactory receptor 1291, pseudogene 1
mm39_v1_chr1_+_88139678_88139707	0.0031861449024495137	Hoxd9	ENSMUST00000073049.7|Ugt1a1|ENSMUSG00000089960.2|UDP glucuronosyltransferase 1 family, polypeptide A1
mm39_v1_chr16_+_22739191_22739222	0.003124479418472204	Hoxd9	ENSMUST00000116625.10|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr3_+_93052089_93052106	0.003009781913810907	Hoxd9	ENSMUST00000107300.7|Crnn|ENSMUSG00000078657.7|cornulin	ENSMUST00000195515.2|Crnn|ENSMUSG00000078657.7|cornulin
mm39_v1_chr19_+_13717092_13717092	0.0028309584014216222	Hoxd9	ENSMUST00000207836.3|Olfr1494|ENSMUSG00000050865.6|olfactory receptor 1494
mm39_v1_chr6_+_122530758_122530775	0.0027894214786069785	Hoxd9	ENSMUST00000043301.14|Aicda|ENSMUSG00000040627.15|activation-induced cytidine deaminase
mm39_v1_chr10_+_23796254_23796254	0.0026374978002477066	Hoxd9	ENSMUST00000051532.5|Taar1|ENSMUSG00000056379.4|trace amine-associated receptor 1
mm39_v1_chr1_-_59200718_59200795	0.002481349624253609	Hoxd9	ENSMUST00000078874.14|Mpp4|ENSMUSG00000079550.10|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	ENSMUST00000066374.14|Mpp4|ENSMUSG00000079550.10|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm39_v1_chr10_+_40559249_40559278	0.002173862263084559	Hoxd9	ENSMUST00000058747.4|Mettl24|ENSMUSG00000045555.4|methyltransferase like 24
mm39_v1_chr13_+_4109566_4109600	0.0018838345671638665	Hoxd9	ENSMUST00000041768.7|Akr1c14|ENSMUSG00000033715.16|aldo-keto reductase family 1, member C14
mm39_v1_chr7_+_107166653_107166668	0.001773499827896143	Hoxd9	ENSMUST00000120990.2|Olfml1|ENSMUSG00000051041.9|olfactomedin-like 1
mm39_v1_chr5_-_18054702_18054733	0.0016963902568609922	Hoxd9	ENSMUST00000165232.8|Cd36|ENSMUSG00000002944.16|CD36 molecule
mm39_v1_chr5_-_69499014_69499028	0.0016456761872914512	Hoxd9	ENSMUST00000087231.4|Kctd8|ENSMUSG00000037653.8|potassium channel tetramerisation domain containing 8	ENSMUST00000054095.6|Kctd8|ENSMUSG00000037653.8|potassium channel tetramerisation domain containing 8
mm39_v1_chr2_-_88175071_88175071	0.0014243567268303493	Hoxd9	ENSMUST00000137895.3|Olfr1177-ps|ENSMUSG00000075128.8|olfactory receptor 1177, pseudogene
mm39_v1_chr16_-_22847760_22847775	0.001236518505811798	Hoxd9	ENSMUST00000039338.13|Kng2|ENSMUSG00000060459.15|kininogen 2
mm39_v1_chr16_-_22847829_22847856	0.0009173483239668195	Hoxd9	ENSMUST00000100046.9|Kng2|ENSMUSG00000060459.15|kininogen 2
mm39_v1_chr7_-_107446697_107446697	0.00066913422241688	Hoxd9	ENSMUST00000220193.2|Olfr470|ENSMUSG00000109542.3|olfactory receptor 470
mm39_v1_chr6_+_18866308_18866333	0.0004001562353667176	Hoxd9	ENSMUST00000031489.10|Ankrd7|ENSMUSG00000029517.14|ankyrin repeat domain 7
mm39_v1_chr7_+_106673037_106673037	0.00017753270624694989	Hoxd9	ENSMUST00000054629.7|Olfr714|ENSMUSG00000049674.8|olfactory receptor 714
