mm39_v1_chr18_+_60907698_60907753	0.2613504132976045	Lhx3	ENSMUST00000118551.8|Rps14|ENSMUSG00000024608.12|ribosomal protein S14
mm39_v1_chr18_+_60907668_60907697	0.21762302589632163	Lhx3	ENSMUST00000025511.11|Rps14|ENSMUSG00000024608.12|ribosomal protein S14
mm39_v1_chr3_+_142326363_142326426	0.20110378324135	Lhx3	ENSMUST00000165774.8|Gbp2|ENSMUSG00000028270.13|guanylate binding protein 2
mm39_v1_chr15_+_65682066_65682083	0.17566733969473713	Lhx3	ENSMUST00000211878.2|Efr3a|ENSMUSG00000015002.19|EFR3 homolog A
mm39_v1_chr2_+_36120438_36120557	0.1739756774434434	Lhx3	ENSMUST00000062069.6|Ptgs1|ENSMUSG00000047250.14|prostaglandin-endoperoxide synthase 1
mm39_v1_chr10_-_35587888_35587888	0.16090371720159166	Lhx3	ENSMUST00000080898.4|Amd2|ENSMUSG00000063953.4|S-adenosylmethionine decarboxylase 2
mm39_v1_chr14_+_69585036_69585036	0.15636681772187247	Lhx3	ENSMUST00000064831.6|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4
mm39_v1_chr7_-_45480200_45480368	0.14543538836075048	Lhx3	ENSMUST00000107723.9|Grwd1|ENSMUSG00000053801.19|glutamate-rich WD repeat containing 1	ENSMUST00000131384.3|Grwd1|ENSMUSG00000053801.19|glutamate-rich WD repeat containing 1
mm39_v1_chr19_-_24178000_24178016	0.1158511022678459	Lhx3	ENSMUST00000233658.3|Tjp2|ENSMUSG00000024812.12|tight junction protein 2
mm39_v1_chrM_+_9459_9459	0.11487979454013214	Lhx3	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm39_v1_chr17_-_36343573_36343747	0.10947176254184808	Lhx3	ENSMUST00000102678.5|H2-T23|ENSMUSG00000067212.9|histocompatibility 2, T region locus 23
mm39_v1_chr12_-_84664001_84664203	0.10513269175930637	Lhx3	ENSMUST00000221070.2|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4	ENSMUST00000021666.6|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4	ENSMUST00000223107.2|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4
mm39_v1_chr11_-_4045343_4045445	0.08784361457841286	Lhx3	ENSMUST00000004868.6|Mtfp1|ENSMUSG00000004748.6|mitochondrial fission process 1
mm39_v1_chr11_+_109434519_109434580	0.08631204108638114	Lhx3	ENSMUST00000106696.2|Arsg|ENSMUSG00000020604.14|arylsulfatase G
mm39_v1_chr9_+_21634779_21634911	0.08456546839838881	Lhx3	ENSMUST00000034713.9|Ldlr|ENSMUSG00000032193.10|low density lipoprotein receptor
mm39_v1_chr2_+_163500290_163500430	0.07933131768849212	Lhx3	ENSMUST00000164399.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000064703.13|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000099105.9|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000152418.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000126182.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma	ENSMUST00000131228.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr9_+_120758282_120758335	0.0767492353069081	Lhx3	ENSMUST00000130466.8|Ctnnb1|ENSMUSG00000006932.18|catenin (cadherin associated protein), beta 1
mm39_v1_chr13_-_43634695_43634823	0.0748117933266409	Lhx3	ENSMUST00000144326.4|Ranbp9|ENSMUSG00000038546.10|RAN binding protein 9
mm39_v1_chrX_+_41241049_41241072	0.07304147278156797	Lhx3	ENSMUST00000128799.3|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr1_+_177272297_177272308	0.07103856077763576	Lhx3	ENSMUST00000193440.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr12_-_25147139_25147282	0.06808309808054738	Lhx3	ENSMUST00000221761.2|Id2|ENSMUSG00000020644.10|inhibitor of DNA binding 2
mm39_v1_chr2_-_84255602_84255755	0.06753689051926773	Lhx3	ENSMUST00000074262.9|Calcrl|ENSMUSG00000059588.14|calcitonin receptor-like
mm39_v1_chr3_+_151143524_151143551	0.06388158422867936	Lhx3	ENSMUST00000046977.12|Adgrl4|ENSMUSG00000039167.13|adhesion G protein-coupled receptor L4
mm39_v1_chr7_+_99808452_99808489	0.05957778311463968	Lhx3	ENSMUST00000032967.4|Lipt2|ENSMUSG00000030725.5|lipoyl(octanoyl) transferase 2 (putative)
mm39_v1_chr5_+_122560501_122560585	0.05946131976878437	Lhx3	ENSMUST00000031422.10|Anapc7|ENSMUSG00000029466.12|anaphase promoting complex subunit 7	ENSMUST00000119792.2|Anapc7|ENSMUSG00000029466.12|anaphase promoting complex subunit 7
mm39_v1_chr5_+_96357337_96357352	0.05868991106893843	Lhx3	ENSMUST00000117766.8|Mrpl1|ENSMUSG00000029486.14|mitochondrial ribosomal protein L1
mm39_v1_chr3_+_95226093_95226104	0.05848265019820219	Lhx3	ENSMUST00000139866.2|Cers2|ENSMUSG00000015714.12|ceramide synthase 2
mm39_v1_chr3_+_84859453_84859493	0.054601780753435844	Lhx3	ENSMUST00000029727.8|Fbxw7|ENSMUSG00000028086.16|F-box and WD-40 domain protein 7
mm39_v1_chr17_-_35081129_35081155	0.053657638130792155	Lhx3	ENSMUST00000154526.8|Cfb|ENSMUSG00000090231.11|complement factor B
mm39_v1_chr2_+_152468850_152468898	0.05175858895481257	Lhx3	ENSMUST00000000369.4|Rem1|ENSMUSG00000000359.4|rad and gem related GTP binding protein 1	ENSMUST00000150913.2|Rem1|ENSMUSG00000000359.4|rad and gem related GTP binding protein 1
mm39_v1_chr7_+_126575752_126575770	0.05000038781157843	Lhx3	ENSMUST00000206346.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr6_-_115014777_115014842	0.04527347133472112	Lhx3	ENSMUST00000174848.8|Tamm41|ENSMUSG00000030316.14|TAM41 mitochondrial translocator assembly and maintenance homolog	ENSMUST00000032461.12|Tamm41|ENSMUSG00000030316.14|TAM41 mitochondrial translocator assembly and maintenance homolog
mm39_v1_chr9_-_103569984_103570011	0.044071097948833106	Lhx3	ENSMUST00000049452.15|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108
mm39_v1_chr11_-_106205320_106205403	0.04394877691285019	Lhx3	ENSMUST00000167143.2|Cd79b|ENSMUSG00000040592.12|CD79B antigen
mm39_v1_chr13_+_93441307_93441443	0.04368341499824553	Lhx3	ENSMUST00000080127.12|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chrX_-_8118541_8118645	0.04355548153033028	Lhx3	ENSMUST00000115594.8|Ftsj1|ENSMUSG00000031171.12|FtsJ RNA methyltransferase homolog 1 (E. coli)	ENSMUST00000115595.8|Ftsj1|ENSMUSG00000031171.12|FtsJ RNA methyltransferase homolog 1 (E. coli)	ENSMUST00000033513.10|Ftsj1|ENSMUSG00000031171.12|FtsJ RNA methyltransferase homolog 1 (E. coli)
mm39_v1_chr1_+_177272215_177272235	0.04189065747783605	Lhx3	ENSMUST00000192851.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18	ENSMUST00000193480.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18	ENSMUST00000195388.2|Zbtb18|ENSMUSG00000063659.12|zinc finger and BTB domain containing 18
mm39_v1_chr17_-_35081456_35081546	0.03870500840860341	Lhx3	ENSMUST00000025229.11|Cfb|ENSMUSG00000090231.11|complement factor B	ENSMUST00000176203.9|Cfb|ENSMUSG00000090231.11|complement factor B	ENSMUST00000128767.8|Cfb|ENSMUSG00000090231.11|complement factor B
mm39_v1_chr13_+_93440572_93440646	0.03850658797703638	Lhx3	ENSMUST00000109493.9|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr10_-_62343516_62343545	0.03846390648345055	Lhx3	ENSMUST00000020271.13|Srgn|ENSMUSG00000020077.15|serglycin
mm39_v1_chr10_-_37014859_37014933	0.03674041819049662	Lhx3	ENSMUST00000092584.6|Marcks|ENSMUSG00000069662.6|myristoylated alanine rich protein kinase C substrate
mm39_v1_chr17_-_56343531_56343624	0.03487911164598899	Lhx3	ENSMUST00000233803.2|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chrX_+_99669343_99669343	0.034545776661253344	Lhx3	ENSMUST00000048962.4|Kif4|ENSMUSG00000034311.4|kinesin family member 4
mm39_v1_chr4_+_147216495_147216495	0.03308304051899543	Lhx3	ENSMUST00000084149.10|Zfp991|ENSMUSG00000067916.10|zinc finger protein 991
mm39_v1_chr5_-_3697806_3698008	0.0293004553187028	Lhx3	ENSMUST00000119783.2|Gatad1|ENSMUSG00000007415.16|GATA zinc finger domain containing 1	ENSMUST00000007559.15|Gatad1|ENSMUSG00000007415.16|GATA zinc finger domain containing 1
mm39_v1_chr9_+_111014254_111014265	0.02909070843411009	Lhx3	ENSMUST00000198986.2|Lrrfip2|ENSMUSG00000032497.20|leucine rich repeat (in FLII) interacting protein 2
mm39_v1_chr14_-_70945434_70945486	0.02895760628006644	Lhx3	ENSMUST00000228346.2|Xpo7|ENSMUSG00000022100.15|exportin 7
mm39_v1_chr2_+_110427643_110427661	0.02792489815301202	Lhx3	ENSMUST00000045972.13|Slc5a12|ENSMUSG00000041644.15|solute carrier family 5 (sodium/glucose cotransporter), member 12	ENSMUST00000111026.3|Slc5a12|ENSMUSG00000041644.15|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm39_v1_chrX_+_65696608_65696638	0.026158898290002536	Lhx3	ENSMUST00000036043.5|Slitrk2|ENSMUSG00000036790.6|SLIT and NTRK-like family, member 2
mm39_v1_chr11_+_6510167_6510190	0.025875142885784914	Lhx3	ENSMUST00000109722.9|Ccm2|ENSMUSG00000000378.16|cerebral cavernous malformation 2
mm39_v1_chr9_-_110576124_110576190	0.02559650667125994	Lhx3	ENSMUST00000199862.5|Pth1r|ENSMUSG00000032492.15|parathyroid hormone 1 receptor	ENSMUST00000198865.5|Pth1r|ENSMUSG00000032492.15|parathyroid hormone 1 receptor
mm39_v1_chr2_+_22959223_22959339	0.025006394012301418	Lhx3	ENSMUST00000114523.10|Acbd5|ENSMUSG00000026781.18|acyl-Coenzyme A binding domain containing 5
mm39_v1_chr3_+_151143557_151143593	0.024954471530924116	Lhx3	ENSMUST00000196970.3|Adgrl4|ENSMUSG00000039167.13|adhesion G protein-coupled receptor L4
mm39_v1_chr10_-_130265572_130265572	0.024613115991564818	Lhx3	ENSMUST00000171811.4|Vmn2r85|ENSMUSG00000092048.4|vomeronasal 2, receptor 85
mm39_v1_chr10_+_5543769_5543809	0.024320687359242425	Lhx3	ENSMUST00000051809.10|Myct1|ENSMUSG00000046916.10|myc target 1
mm39_v1_chr7_+_45271229_45271249	0.024022814738034134	Lhx3	ENSMUST00000033100.5|Izumo1|ENSMUSG00000064158.7|izumo sperm-egg fusion 1
mm39_v1_chr14_+_80237691_80237749	0.02263516226009813	Lhx3	ENSMUST00000228749.2|Olfm4|ENSMUSG00000022026.8|olfactomedin 4	ENSMUST00000088735.4|Olfm4|ENSMUSG00000022026.8|olfactomedin 4
mm39_v1_chr4_+_146695418_146695418	0.021040689193228303	Lhx3	ENSMUST00000130825.8|Zfp993|ENSMUSG00000063245.12|zinc finger protein 993
mm39_v1_chr4_-_58499398_58499409	0.019643620638461434	Lhx3	ENSMUST00000107570.2|Lpar1|ENSMUSG00000038668.15|lysophosphatidic acid receptor 1
mm39_v1_chr4_+_102446883_102447040	0.01875052419729538	Lhx3	ENSMUST00000097949.11|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific	ENSMUST00000106901.2|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr17_-_78991691_78991781	0.01868882047346521	Lhx3	ENSMUST00000145480.2|Strn|ENSMUSG00000024077.16|striatin, calmodulin binding protein
mm39_v1_chr13_-_101829070_101829109	0.01867949147304366	Lhx3	ENSMUST00000187009.7|Pik3r1|ENSMUSG00000041417.16|phosphoinositide-3-kinase regulatory subunit 1
mm39_v1_chr14_+_53310220_53310220	0.01832290682499509	Lhx3	ENSMUST00000196079.2|Trav13d-4|ENSMUSG00000096329.3|T cell receptor alpha variable 13D-4
mm39_v1_chrX_-_99669507_99669560	0.016939460802866256	Lhx3	ENSMUST00000059099.7|Pdzd11|ENSMUSG00000015668.14|PDZ domain containing 11
mm39_v1_chr2_+_22959452_22959467	0.016924219746345722	Lhx3	ENSMUST00000155602.4|Acbd5|ENSMUSG00000026781.18|acyl-Coenzyme A binding domain containing 5
mm39_v1_chr11_-_30148230_30148263	0.016721135144124783	Lhx3	ENSMUST00000102838.10|Sptbn1|ENSMUSG00000020315.19|spectrin beta, non-erythrocytic 1
mm39_v1_chr6_+_34757346_34757413	0.016661639177615407	Lhx3	ENSMUST00000115016.8|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3	ENSMUST00000115017.8|Agbl3|ENSMUSG00000038836.16|ATP/GTP binding protein-like 3
mm39_v1_chr17_+_79919267_79919292	0.016344162140330045	Lhx3	ENSMUST00000223924.2|Rmdn2|ENSMUSG00000036368.9|regulator of microtubule dynamics 2
mm39_v1_chr5_-_86437119_86437167	0.0163344489480394	Lhx3	ENSMUST00000196462.2|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c	ENSMUST00000059424.10|Tmprss11c|ENSMUSG00000061184.9|transmembrane protease, serine 11c
mm39_v1_chr19_+_20579322_20579343	0.016152952951548234	Lhx3	ENSMUST00000087638.4|Aldh1a1|ENSMUSG00000053279.9|aldehyde dehydrogenase family 1, subfamily A1
mm39_v1_chr6_-_70313491_70313491	0.016104409619091913	Lhx3	ENSMUST00000103388.4|Igkv6-20|ENSMUSG00000076587.4|immunoglobulin kappa variable 6-20
mm39_v1_chr4_-_14621805_14621819	0.015530578860260996	Lhx3	ENSMUST00000042221.14|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr17_-_56343625_56343647	0.015393708115989783	Lhx3	ENSMUST00000003268.11|Sh3gl1|ENSMUSG00000003200.11|SH3-domain GRB2-like 1
mm39_v1_chr11_-_99265721_99265735	0.015278724460239455	Lhx3	ENSMUST00000006963.3|Krt28|ENSMUSG00000055937.2|keratin 28
mm39_v1_chr2_+_89642395_89642395	0.014340460557366484	Lhx3	ENSMUST00000214508.2|Olfr1255|ENSMUSG00000045148.6|olfactory receptor 1255
mm39_v1_chr4_+_109092459_109092459	0.014152890428334139	Lhx3	ENSMUST00000106631.9|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr10_+_115979787_115979808	0.014128373072026842	Lhx3	ENSMUST00000105271.9|Ptprr|ENSMUSG00000020151.17|protein tyrosine phosphatase, receptor type, R
mm39_v1_chr19_-_34143437_34143489	0.013744968809809261	Lhx3	ENSMUST00000025686.9|Ankrd22|ENSMUSG00000024774.17|ankyrin repeat domain 22
mm39_v1_chr4_+_145241454_145241454	0.013742401332886116	Lhx3	ENSMUST00000105741.2|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990
mm39_v1_chr5_+_117378510_117378529	0.013304974187322998	Lhx3	ENSMUST00000111975.3|Taok3|ENSMUSG00000061288.14|TAO kinase 3
mm39_v1_chr10_-_130020042_130020055	0.01295201657633475	Lhx3	ENSMUST00000216661.2|Olfr826|ENSMUSG00000059862.5|olfactory receptor 826	ENSMUST00000203720.3|Olfr826|ENSMUSG00000059862.5|olfactory receptor 826
mm39_v1_chr4_+_146586445_146586484	0.012918960270903342	Lhx3	ENSMUST00000105735.9|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr1_+_88234454_88234481	0.012463435365119775	Lhx3	ENSMUST00000040210.14|Trpm8|ENSMUSG00000036251.17|transient receptor potential cation channel, subfamily M, member 8
mm39_v1_chr14_+_53994813_53994813	0.011709591631419644	Lhx3	ENSMUST00000180380.3|Trav13-4-dv7|ENSMUSG00000094562.6|T cell receptor alpha variable 13-4-DV7
mm39_v1_chr11_+_62737887_62737913	0.01113254837204237	Lhx3	ENSMUST00000036085.11|Fbxw10|ENSMUSG00000090173.9|F-box and WD-40 domain protein 10
mm39_v1_chr14_+_53599724_53599724	0.011033840858729348	Lhx3	ENSMUST00000196105.2|Trav13n-4|ENSMUSG00000076823.4|T cell receptor alpha variable 13N-4
mm39_v1_chr5_+_150679760_150679774	0.010602941456930248	Lhx3	ENSMUST00000110486.2|Pds5b|ENSMUSG00000034021.16|PDS5 cohesin associated factor B
mm39_v1_chr10_+_129493563_129493563	0.010473973037742468	Lhx3	ENSMUST00000217094.2|Olfr800|ENSMUSG00000108114.3|olfactory receptor 800
mm39_v1_chr2_+_87686206_87686206	0.010448879613322946	Lhx3	ENSMUST00000217376.2|Olfr1151|ENSMUSG00000047039.5|olfactory receptor 1151
mm39_v1_chr17_+_38104420_38104420	0.010423931702650973	Lhx3	ENSMUST00000216051.3|Olfr123|ENSMUSG00000045202.7|olfactory receptor 123
mm39_v1_chr7_-_115459082_115459098	0.009798651919163064	Lhx3	ENSMUST00000206123.2|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr6_-_70116066_70116094	0.009716298037780796	Lhx3	ENSMUST00000103379.3|Igkv6-29|ENSMUSG00000076578.4|immunoglobulin kappa chain variable 6-29	ENSMUST00000197371.2|Igkv6-29|ENSMUSG00000076578.4|immunoglobulin kappa chain variable 6-29
mm39_v1_chrX_-_142716085_142716149	0.009707435116310182	Lhx3	ENSMUST00000087313.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr9_+_96140781_96140838	0.009646414217054476	Lhx3	ENSMUST00000190104.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000179416.8|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000189606.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr2_-_87570322_87570322	0.009610175026048412	Lhx3	ENSMUST00000214573.2|Olfr1138|ENSMUSG00000075149.3|olfactory receptor 1138
mm39_v1_chr13_+_23343482_23343482	0.009464400219566323	Lhx3	ENSMUST00000226845.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219	ENSMUST00000228666.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219	ENSMUST00000227388.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219
mm39_v1_chrX_+_9751861_9751861	0.009452585941808466	Lhx3	ENSMUST00000067529.9|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5	ENSMUST00000086165.4|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5
mm39_v1_chr6_-_66537080_66537080	0.009068748509377821	Lhx3	ENSMUST00000079584.3|Vmn1r32|ENSMUSG00000062905.3|vomeronasal 1 receptor 32	ENSMUST00000227014.2|Vmn1r32|ENSMUSG00000062905.3|vomeronasal 1 receptor 32
mm39_v1_chr4_-_14621497_14621506	0.009033959806183187	Lhx3	ENSMUST00000149633.2|Slc26a7|ENSMUSG00000040569.14|solute carrier family 26, member 7
mm39_v1_chr4_-_146993984_146994047	0.008578564635082216	Lhx3	ENSMUST00000238583.2|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411	ENSMUST00000049821.4|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411
mm39_v1_chr4_+_109092610_109092610	0.008528743133366426	Lhx3	ENSMUST00000106628.8|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr5_-_142515792_142515841	0.008507799437624608	Lhx3	ENSMUST00000099400.3|Papolb|ENSMUSG00000074817.3|poly (A) polymerase beta (testis specific)
mm39_v1_chr15_-_101422054_101422054	0.008185273266494672	Lhx3	ENSMUST00000230067.3|Gm49425|ENSMUSG00000116336.3|predicted gene, 49425
mm39_v1_chr9_-_15212745_15212846	0.007882652499016507	Lhx3	ENSMUST00000217042.2|4931406C07Rik|ENSMUSG00000031938.16|RIKEN cDNA 4931406C07 gene
mm39_v1_chr2_-_86372824_86372824	0.007612458674243256	Lhx3	ENSMUST00000216480.2|Olfr1079|ENSMUSG00000075179.4|olfactory receptor 1079	ENSMUST00000111582.3|Olfr1079|ENSMUSG00000075179.4|olfactory receptor 1079
mm39_v1_chr1_+_153541412_153541455	0.007591662772055423	Lhx3	ENSMUST00000111814.8|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8	ENSMUST00000111810.2|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8
mm39_v1_chr15_-_98507913_98507991	0.007569069045783543	Lhx3	ENSMUST00000226500.2|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6	ENSMUST00000227501.2|Adcy6|ENSMUSG00000022994.10|adenylate cyclase 6
mm39_v1_chr11_+_67128843_67128871	0.00744312724955457	Lhx3	ENSMUST00000018632.11|Myh4|ENSMUSG00000057003.13|myosin, heavy polypeptide 4, skeletal muscle
mm39_v1_chr7_+_107992374_107992374	0.007226431365092559	Lhx3	ENSMUST00000215215.2|Olfr495|ENSMUSG00000110253.3|olfactory receptor 495
mm39_v1_chr3_+_59989282_59989297	0.006858175706699694	Lhx3	ENSMUST00000029326.6|Sucnr1|ENSMUSG00000027762.7|succinate receptor 1
mm39_v1_chr3_+_122213420_122213436	0.006768244749453135	Lhx3	ENSMUST00000029766.9|Bcar3|ENSMUSG00000028121.9|breast cancer anti-estrogen resistance 3
mm39_v1_chr9_+_38738911_38738911	0.006744383805927419	Lhx3	ENSMUST00000051238.7|Olfr923|ENSMUSG00000044798.8|olfactory receptor 923	ENSMUST00000219798.2|Olfr923|ENSMUSG00000044798.8|olfactory receptor 923
mm39_v1_chr2_-_88559941_88559941	0.006676846229120605	Lhx3	ENSMUST00000099815.2|Olfr1197|ENSMUSG00000075119.3|olfactory receptor 1197
mm39_v1_chr17_-_37404764_37404764	0.006291637967650358	Lhx3	ENSMUST00000087144.5|Olfr91|ENSMUSG00000095377.3|olfactory receptor 91
mm39_v1_chr14_+_51648458_51648458	0.005916677659109551	Lhx3	ENSMUST00000022438.12|Vmn2r88|ENSMUSG00000000606.19|vomeronasal 2, receptor 88
mm39_v1_chrX_+_162923474_162923614	0.005817784772130232	Lhx3	ENSMUST00000073973.11|Ace2|ENSMUSG00000015405.16|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm39_v1_chr14_-_109151590_109151615	0.005660405632308348	Lhx3	ENSMUST00000100322.4|Slitrk1|ENSMUSG00000075478.4|SLIT and NTRK-like family, member 1
mm39_v1_chr17_-_14914484_14914503	0.005637512900687214	Lhx3	ENSMUST00000170872.3|Thbs2|ENSMUSG00000023885.10|thrombospondin 2
mm39_v1_chr16_-_29363671_29363687	0.005585324849005143	Lhx3	ENSMUST00000039090.9|Atp13a4|ENSMUSG00000038094.16|ATPase type 13A4
mm39_v1_chr1_+_153541339_153541403	0.005559721831263878	Lhx3	ENSMUST00000147700.8|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8	ENSMUST00000147482.8|Rgs8|ENSMUSG00000042671.13|regulator of G-protein signaling 8
mm39_v1_chr4_+_104770653_104770776	0.005503687378686343	Lhx3	ENSMUST00000106803.9|Fyb2|ENSMUSG00000078612.10|FYN binding protein 2	ENSMUST00000106804.2|Fyb2|ENSMUSG00000078612.10|FYN binding protein 2
mm39_v1_chr7_-_86046700_86046700	0.0052956668642152385	Lhx3	ENSMUST00000215733.2|Olfr303|ENSMUSG00000039608.7|olfactory receptor 303
mm39_v1_chr3_-_67422821_67422856	0.005281819938040474	Lhx3	ENSMUST00000054825.5|Rarres1|ENSMUSG00000049404.8|retinoic acid receptor responder (tazarotene induced) 1
mm39_v1_chr17_+_37977879_37977879	0.005267153221054365	Lhx3	ENSMUST00000215811.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr11_+_59197746_59197761	0.005255200751213661	Lhx3	ENSMUST00000000128.10|Wnt9a|ENSMUSG00000000126.12|wingless-type MMTV integration site family, member 9A	ENSMUST00000108783.4|Wnt9a|ENSMUSG00000000126.12|wingless-type MMTV integration site family, member 9A
mm39_v1_chr3_-_144514386_144514386	0.0052227975486601515	Lhx3	ENSMUST00000197013.2|Clca3a2|ENSMUSG00000028262.14|chloride channel accessory 3A2
mm39_v1_chr2_+_111607774_111607774	0.005162835065432114	Lhx3	ENSMUST00000214708.2|Olfr1302|ENSMUSG00000044560.4|olfactory receptor 1302	ENSMUST00000215244.2|Olfr1302|ENSMUSG00000044560.4|olfactory receptor 1302
mm39_v1_chr19_+_13757912_13757912	0.004978507964005421	Lhx3	ENSMUST00000057390.4|Olfr1496|ENSMUSG00000048356.7|olfactory receptor 1496	ENSMUST00000219412.2|Olfr1496|ENSMUSG00000048356.7|olfactory receptor 1496
mm39_v1_chr1_-_166509404_166509416	0.0049165686374794005	Lhx3	ENSMUST00000148677.2|Fmo9|ENSMUSG00000026560.14|flavin containing monooxygenase 9	ENSMUST00000027843.11|Fmo9|ENSMUSG00000026560.14|flavin containing monooxygenase 9
mm39_v1_chr11_+_73489420_73489420	0.0048534050987798765	Lhx3	ENSMUST00000214228.2|Olfr384|ENSMUSG00000060335.3|olfactory receptor 384
mm39_v1_chr14_-_48902555_48902572	0.004773768051228728	Lhx3	ENSMUST00000118578.9|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr9_+_96140750_96140764	0.00472795378894474	Lhx3	ENSMUST00000186609.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr15_+_98468885_98468908	0.004685457868820226	Lhx3	ENSMUST00000023728.8|Tex49|ENSMUSG00000022993.8|testis expressed 49
mm39_v1_chr7_+_21531776_21531776	0.004674489093904096	Lhx3	ENSMUST00000170931.2|Vmn1r135|ENSMUSG00000095064.2|vomeronasal 1 receptor 135
mm39_v1_chr16_-_16494269_16494269	0.00459247433690675	Lhx3	ENSMUST00000206365.3|Olfr19|ENSMUSG00000048101.7|olfactory receptor 19
mm39_v1_chr11_-_99979052_99979096	0.004552575670615725	Lhx3	ENSMUST00000107419.2|Krt32|ENSMUSG00000046095.6|keratin 32
mm39_v1_chr10_+_129601351_129601351	0.004506079273898575	Lhx3	ENSMUST00000203236.3|Olfr808|ENSMUSG00000049894.4|olfactory receptor 808
mm39_v1_chr2_+_85745537_85745537	0.004487683315648494	Lhx3	ENSMUST00000213474.3|Olfr1025-ps1|ENSMUSG00000058884.7|olfactory receptor 1025, pseudogene 1
mm39_v1_chr17_-_68257900_68257992	0.004452654733943905	Lhx3	ENSMUST00000164647.8|Arhgap28|ENSMUSG00000024043.14|Rho GTPase activating protein 28
mm39_v1_chr10_+_36382810_36382843	0.00440085590373068	Lhx3	ENSMUST00000167191.8|Hs3st5|ENSMUSG00000044499.12|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	ENSMUST00000058738.11|Hs3st5|ENSMUSG00000044499.12|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm39_v1_chr16_-_19443851_19443851	0.004343909615654312	Lhx3	ENSMUST00000079891.4|Olfr171|ENSMUSG00000060480.6|olfactory receptor 171
mm39_v1_chr2_-_76700830_76700955	0.004337394564839688	Lhx3	ENSMUST00000138542.2|Ttn|ENSMUSG00000051747.16|titin
mm39_v1_chr2_+_86612823_86612823	0.004172153214322624	Lhx3	ENSMUST00000213354.2|Olfr1093|ENSMUSG00000047969.6|olfactory receptor 1093	ENSMUST00000219561.2|Olfr1093|ENSMUSG00000047969.6|olfactory receptor 1093
mm39_v1_chr1_+_21310803_21310814	0.004102381390122427	Lhx3	ENSMUST00000027067.15|Gsta3|ENSMUSG00000025934.16|glutathione S-transferase, alpha 3
mm39_v1_chr3_+_93184854_93184875	0.0040983445101115635	Lhx3	ENSMUST00000180308.3|Flg|ENSMUSG00000102439.5|filaggrin
mm39_v1_chr2_-_86488800_86488800	0.004045035693348603	Lhx3	ENSMUST00000099879.2|Olfr1085|ENSMUSG00000075176.4|olfactory receptor 1085
mm39_v1_chr19_-_39875192_39875243	0.004007489191561853	Lhx3	ENSMUST00000168838.3|Cyp2c69|ENSMUSG00000092008.3|cytochrome P450, family 2, subfamily c, polypeptide 69
mm39_v1_chr2_-_88854443_88854443	0.004004832533438354	Lhx3	ENSMUST00000099799.5|Olfr1217|ENSMUSG00000101391.4|olfactory receptor 1217
mm39_v1_chr18_+_57601541_57601614	0.004004625148893759	Lhx3	ENSMUST00000091892.4|Ctxn3|ENSMUSG00000069372.4|cortexin 3	ENSMUST00000209782.2|Ctxn3|ENSMUSG00000069372.4|cortexin 3
mm39_v1_chr7_-_107888141_107888141	0.003985724042716308	Lhx3	ENSMUST00000211345.3|Olfr490|ENSMUSG00000109884.4|olfactory receptor 490
mm39_v1_chr3_+_132335575_132335592	0.003963948498638805	Lhx3	ENSMUST00000212804.2|Gimd1|ENSMUSG00000091721.5|GIMAP family P-loop NTPase domain containing 1	ENSMUST00000212852.2|Gimd1|ENSMUSG00000091721.5|GIMAP family P-loop NTPase domain containing 1
mm39_v1_chr7_+_102526329_102526329	0.0038667650995648653	Lhx3	ENSMUST00000098216.2|Olfr568|ENSMUSG00000073965.2|olfactory receptor 568
mm39_v1_chr7_-_119058489_119058508	0.003800804332578539	Lhx3	ENSMUST00000207887.3|Gp2|ENSMUSG00000030954.12|glycoprotein 2 (zymogen granule membrane)	ENSMUST00000239424.2|Gp2|ENSMUSG00000030954.12|glycoprotein 2 (zymogen granule membrane)	ENSMUST00000033255.8|Gp2|ENSMUSG00000030954.12|glycoprotein 2 (zymogen granule membrane)
mm39_v1_chr12_-_118930130_118930156	0.003800365485719249	Lhx3	ENSMUST00000035515.5|Abcb5|ENSMUSG00000072791.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
mm39_v1_chr11_+_62737936_62737960	0.003699703416224239	Lhx3	ENSMUST00000150989.8|Fbxw10|ENSMUSG00000090173.9|F-box and WD-40 domain protein 10	ENSMUST00000176577.2|Fbxw10|ENSMUSG00000090173.9|F-box and WD-40 domain protein 10
mm39_v1_chr3_+_132335704_132335776	0.0035171731660876976	Lhx3	ENSMUST00000212594.2|Gimd1|ENSMUSG00000091721.5|GIMAP family P-loop NTPase domain containing 1
mm39_v1_chr5_+_67126304_67126475	0.0034623949842670443	Lhx3	ENSMUST00000132991.5|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr4_+_88768324_88768324	0.00334007630552782	Lhx3	ENSMUST00000094972.2|Ifna1|ENSMUSG00000095498.2|interferon alpha 1
mm39_v1_chr17_+_69746321_69746321	0.0032155167257037084	Lhx3	ENSMUST00000169935.2|Akain1|ENSMUSG00000091636.3|A kinase (PRKA) anchor inhibitor 1
mm39_v1_chr16_+_14407073_14407073	0.003150241989109624	Lhx3	ENSMUST00000100165.4|A630010A05Rik|ENSMUSG00000075395.12|RIKEN cDNA A630010A05 gene
mm39_v1_chr19_-_39801188_39801258	0.0030210668585029755	Lhx3	ENSMUST00000162507.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000160476.9|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000239028.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40
mm39_v1_chr15_+_16778187_16778187	0.0030153203851414215	Lhx3	ENSMUST00000026432.8|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr14_+_96118660_96118702	0.002932393930766985	Lhx3	ENSMUST00000228913.2|Spertl|ENSMUSG00000034689.3|spermatid associated like	ENSMUST00000045892.3|Spertl|ENSMUSG00000034689.3|spermatid associated like
mm39_v1_chr4_+_145397238_145397255	0.0028465073274911395	Lhx3	ENSMUST00000105738.9|Zfp980|ENSMUSG00000058186.14|zinc finger protein 980
mm39_v1_chr17_-_37615204_37615204	0.0027598078126321746	Lhx3	ENSMUST00000214376.2|Olfr101|ENSMUSG00000092077.3|olfactory receptor 101
mm39_v1_chr4_+_145595364_145595364	0.0026757095744177175	Lhx3	ENSMUST00000123460.2|Zfp986|ENSMUSG00000078500.4|zinc finger protein 986
mm39_v1_chr10_+_129357661_129357661	0.0026305674781039617	Lhx3	ENSMUST00000217228.2|Olfr791|ENSMUSG00000047626.5|olfactory receptor 791
mm39_v1_chr2_+_87405430_87405430	0.002601815613506877	Lhx3	ENSMUST00000081034.2|Olfr1129|ENSMUSG00000062272.5|olfactory receptor 1129
mm39_v1_chrX_+_151320497_151320543	0.0025644222318852456	Lhx3	ENSMUST00000238455.2|Cldn34a|ENSMUSG00000091863.3|claudin 34A
mm39_v1_chr3_+_135053762_135053857	0.0025489417448740733	Lhx3	ENSMUST00000159658.8|Slc9b1|ENSMUSG00000050150.17|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1	ENSMUST00000078568.12|Slc9b1|ENSMUSG00000050150.17|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
mm39_v1_chr11_-_49004584_49004584	0.002431591382761205	Lhx3	ENSMUST00000203007.2|Olfr1396|ENSMUSG00000047511.7|olfactory receptor 1396
mm39_v1_chr7_-_37472290_37472316	0.0024039555851961348	Lhx3	ENSMUST00000176205.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr7_+_22754965_22754965	0.002380979741735254	Lhx3	ENSMUST00000164537.2|Vmn1r163|ENSMUSG00000094934.2|vomeronasal 1 receptor 163
mm39_v1_chr9_+_18320390_18320390	0.002254160508970531	Lhx3	ENSMUST00000098973.3|Ubtfl1|ENSMUSG00000074502.5|upstream binding transcription factor, RNA polymerase I-like 1
mm39_v1_chr2_+_81883566_81883655	0.002206687537325049	Lhx3	ENSMUST00000047527.8|Zfp804a|ENSMUSG00000070866.5|zinc finger protein 804A
mm39_v1_chr6_-_115569504_115569560	0.002154912250713743	Lhx3	ENSMUST00000112957.2|Mkrn2os|ENSMUSG00000068011.5|makorin, ring finger protein 2, opposite strand
mm39_v1_chr11_-_83959999_83960087	0.002072238561090072	Lhx3	ENSMUST00000138208.2|Dusp14|ENSMUSG00000018648.16|dual specificity phosphatase 14
mm39_v1_chr5_-_74863514_74863577	0.0020514251539468734	Lhx3	ENSMUST00000117388.8|Lnx1|ENSMUSG00000029228.16|ligand of numb-protein X 1
mm39_v1_chr11_+_76792977_76792993	0.0018994225079864034	Lhx3	ENSMUST00000102495.8|Tmigd1|ENSMUSG00000020839.17|transmembrane and immunoglobulin domain containing 1
mm39_v1_chrX_-_21041892_21041892	0.001832710337836881	Lhx3	ENSMUST00000096511.5|Gm21876|ENSMUSG00000095316.2|predicted gene, 21876
mm39_v1_chr6_-_50631418_50631427	0.0018005983325997752	Lhx3	ENSMUST00000031853.8|Npvf|ENSMUSG00000029831.8|neuropeptide VF precursor
mm39_v1_chr7_+_107166925_107166973	0.0017786498102394437	Lhx3	ENSMUST00000239087.2|Olfml1|ENSMUSG00000051041.9|olfactomedin-like 1
mm39_v1_chr1_-_158183894_158183914	0.0017310521584045213	Lhx3	ENSMUST00000004133.11|Brinp2|ENSMUSG00000004031.14|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm39_v1_chr12_+_29584560_29584643	0.0017213678807006482	Lhx3	ENSMUST00000021009.10|Myt1l|ENSMUSG00000061911.16|myelin transcription factor 1-like
mm39_v1_chr18_-_42132106_42132121	0.0016190605045251546	Lhx3	ENSMUST00000097591.5|Grxcr2|ENSMUSG00000073574.5|glutaredoxin, cysteine rich 2
mm39_v1_chr6_-_128252540_128252540	0.0016114129960811353	Lhx3	ENSMUST00000130454.8|Tead4|ENSMUSG00000030353.16|TEA domain family member 4
mm39_v1_chr7_+_20606181_20606181	0.0015941596392677216	Lhx3	ENSMUST00000164288.2|Vmn1r116|ENSMUSG00000095973.2|vomeronasal 1 receptor 116
mm39_v1_chr7_-_5325456_5325456	0.0015768436136818706	Lhx3	ENSMUST00000207520.2|Nlrp2|ENSMUSG00000035177.9|NLR family, pyrin domain containing 2
mm39_v1_chr7_+_43077088_43077110	0.001541987725277401	Lhx3	ENSMUST00000239023.2|Gm38999|ENSMUSG00000118553.2|predicted gene, 38999
mm39_v1_chr18_-_39000056_39000070	0.001418022903536356	Lhx3	ENSMUST00000236630.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000237356.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr5_-_70999547_70999681	0.0013822563421812142	Lhx3	ENSMUST00000199705.2|Gabrg1|ENSMUSG00000001260.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm39_v1_chr11_+_58311921_58311948	0.0013157784835480654	Lhx3	ENSMUST00000013797.3|1810065E05Rik|ENSMUSG00000013653.3|RIKEN cDNA 1810065E05 gene
mm39_v1_chr7_+_86312872_86312872	0.0010759744602880786	Lhx3	ENSMUST00000081474.2|Olfr293|ENSMUSG00000063394.4|olfactory receptor 293
mm39_v1_chr11_+_70410445_70410468	0.0009552848869589826	Lhx3	ENSMUST00000179000.2|Gltpd2|ENSMUSG00000046811.4|glycolipid transfer protein domain containing 2
mm39_v1_chr1_-_37955569_37955576	0.0006542224678777656	Lhx3	ENSMUST00000078307.7|Lyg2|ENSMUSG00000061584.7|lysozyme G-like 2
mm39_v1_chr5_+_143166759_143166786	0.0005410783344814474	Lhx3	ENSMUST00000031574.10|Spdye4b|ENSMUSG00000029586.10|speedy/RINGO cell cycle regulator family, member E4B
mm39_v1_chr5_-_104225458_104225474	0.0004970015237508992	Lhx3	ENSMUST00000198485.5|Gm17660|ENSMUSG00000091034.9|predicted gene, 17660	ENSMUST00000164471.8|Gm17660|ENSMUSG00000091034.9|predicted gene, 17660	ENSMUST00000178967.2|Gm17660|ENSMUSG00000091034.9|predicted gene, 17660
mm39_v1_chr18_+_20569226_20569241	0.00021906565345631247	Lhx3	ENSMUST00000019426.5|Dsg4|ENSMUSG00000001804.10|desmoglein 4
mm39_v1_chr15_-_103473481_103473515	0.0001585889643633582	Lhx3	ENSMUST00000228060.2|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1	ENSMUST00000228895.2|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1	ENSMUST00000023134.5|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1
mm39_v1_chr4_+_146033882_146033915	9.274953995237818e-05	Lhx3	ENSMUST00000105730.2|Zfp987|ENSMUSG00000066009.9|zinc finger protein 987	ENSMUST00000091878.6|Zfp987|ENSMUSG00000066009.9|zinc finger protein 987
mm39_v1_chr18_-_38999755_38999801	2.6721522714581214e-05	Lhx3	ENSMUST00000115582.8|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000236060.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
