mm39_v1_chr13_+_23922783_23922798	1.194568210062588	Nkx2-1	ENSMUST00000040914.3|H1f2|ENSMUSG00000036181.3|H1.2 linker histone, cluster member
mm39_v1_chr17_-_57289121_57289162	0.9960807743841705	Nkx2-1	ENSMUST00000056113.5|Acer1|ENSMUSG00000045019.5|alkaline ceramidase 1
mm39_v1_chr5_-_97259447_97259491	0.9218160056414206	Nkx2-1	ENSMUST00000069453.9|Paqr3|ENSMUSG00000055725.12|progestin and adipoQ receptor family member III	ENSMUST00000112968.2|Paqr3|ENSMUSG00000055725.12|progestin and adipoQ receptor family member III
mm39_v1_chr11_-_96868483_96868537	0.8867898001142583	Nkx2-1	ENSMUST00000107624.8|Sp2|ENSMUSG00000018678.14|Sp2 transcription factor
mm39_v1_chr17_+_69071546_69071546	0.8236986061843575	Nkx2-1	ENSMUST00000233625.2|L3mbtl4|ENSMUSG00000041565.18|L3MBTL4 histone methyl-lysine binding protein
mm39_v1_chr10_-_67972401_67972469	0.7734665650202622	Nkx2-1	ENSMUST00000218532.2|Arid5b|ENSMUSG00000019947.11|AT rich interactive domain 5B (MRF1-like)
mm39_v1_chr7_+_28466160_28466252	0.7236577160024702	Nkx2-1	ENSMUST00000122915.8|Sirt2|ENSMUSG00000015149.15|sirtuin 2	ENSMUST00000072965.5|Sirt2|ENSMUSG00000015149.15|sirtuin 2	ENSMUST00000170068.9|Sirt2|ENSMUSG00000015149.15|sirtuin 2
mm39_v1_chr2_+_71811526_71811631	0.7075493927969764	Nkx2-1	ENSMUST00000090826.12|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4	ENSMUST00000102698.10|Rapgef4|ENSMUSG00000049044.17|Rap guanine nucleotide exchange factor (GEF) 4
mm39_v1_chr2_+_128971620_128971712	0.6619861007366012	Nkx2-1	ENSMUST00000035481.5|Chchd5|ENSMUSG00000037938.5|coiled-coil-helix-coiled-coil-helix domain containing 5
mm39_v1_chr11_+_32483290_32483338	0.6535952157864883	Nkx2-1	ENSMUST00000102821.4|Stk10|ENSMUSG00000020272.9|serine/threonine kinase 10
mm39_v1_chr9_+_45924105_45924119	0.6460910417450951	Nkx2-1	ENSMUST00000126865.8|Sik3|ENSMUSG00000034135.16|SIK family kinase 3
mm39_v1_chr3_+_90201388_90201397	0.6279364775986088	Nkx2-1	ENSMUST00000199607.5|Gatad2b|ENSMUSG00000042390.10|GATA zinc finger domain containing 2B
mm39_v1_chr7_-_28465870_28466065	0.5915507229621587	Nkx2-1	ENSMUST00000085851.12|Nfkbib|ENSMUSG00000030595.16|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta	ENSMUST00000032815.11|Nfkbib|ENSMUSG00000030595.16|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta
mm39_v1_chr11_+_68989763_68989811	0.5725422559670266	Nkx2-1	ENSMUST00000021271.14|Per1|ENSMUSG00000020893.18|period circadian clock 1
mm39_v1_chr16_+_24266829_24266903	0.5689836882387261	Nkx2-1	ENSMUST00000078988.10|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr12_-_111638722_111638772	0.5666830488893005	Nkx2-1	ENSMUST00000001304.9|Ckb|ENSMUSG00000001270.10|creatine kinase, brain
mm39_v1_chr9_+_45924120_45924298	0.5259970997687734	Nkx2-1	ENSMUST00000120463.9|Sik3|ENSMUSG00000034135.16|SIK family kinase 3	ENSMUST00000120247.8|Sik3|ENSMUSG00000034135.16|SIK family kinase 3
mm39_v1_chr2_-_88937158_88937179	0.5193457814841602	Nkx2-1	ENSMUST00000099806.3|Olfr1220|ENSMUSG00000101480.4|olfactory receptor 1220	ENSMUST00000213288.2|Olfr1220|ENSMUSG00000101480.4|olfactory receptor 1220
mm39_v1_chr13_+_38009981_38010020	0.49887128855346863	Nkx2-1	ENSMUST00000110238.10|Rreb1|ENSMUSG00000039087.18|ras responsive element binding protein 1
mm39_v1_chr17_-_34846323_34846499	0.4719977767342735	Nkx2-1	ENSMUST00000168709.3|Gm20460|ENSMUSG00000092176.2|predicted gene 20460	ENSMUST00000064953.15|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000170345.8|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000171121.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000168391.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2	ENSMUST00000169067.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chrX_-_73009933_73009982	0.4693777769995052	Nkx2-1	ENSMUST00000114372.3|Hcfc1|ENSMUSG00000031386.15|host cell factor C1	ENSMUST00000033761.13|Hcfc1|ENSMUSG00000031386.15|host cell factor C1
mm39_v1_chr2_-_73722874_73722900	0.4310555196092524	Nkx2-1	ENSMUST00000136958.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112010.9|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000128531.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112017.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2
mm39_v1_chr9_+_75682637_75682661	0.4178760528327696	Nkx2-1	ENSMUST00000012281.8|Bmp5|ENSMUSG00000032179.8|bone morphogenetic protein 5
mm39_v1_chr7_+_127845984_127846120	0.39901974426188996	Nkx2-1	ENSMUST00000164710.8|Tgfb1i1|ENSMUSG00000030782.18|transforming growth factor beta 1 induced transcript 1	ENSMUST00000070656.12|Tgfb1i1|ENSMUSG00000030782.18|transforming growth factor beta 1 induced transcript 1
mm39_v1_chr16_+_90535212_90535228	0.3807508102286804	Nkx2-1	ENSMUST00000038197.3|Mrap|ENSMUSG00000039956.10|melanocortin 2 receptor accessory protein
mm39_v1_chr2_-_73722932_73722983	0.3630675269326714	Nkx2-1	ENSMUST00000154456.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000090802.11|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000055833.12|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112007.8|Atf2|ENSMUSG00000027104.19|activating transcription factor 2	ENSMUST00000112016.9|Atf2|ENSMUSG00000027104.19|activating transcription factor 2
mm39_v1_chrX_+_55391749_55391775	0.3530354241665143	Nkx2-1	ENSMUST00000101560.4|Zfp449|ENSMUSG00000073176.5|zinc finger protein 449
mm39_v1_chr2_-_121948845_121948878	0.33161499617661483	Nkx2-1	ENSMUST00000036450.8|Spg11|ENSMUSG00000033396.14|SPG11, spatacsin vesicle trafficking associated
mm39_v1_chr1_-_173363523_173363579	0.3241578524074389	Nkx2-1	ENSMUST00000139092.8|Ifi214|ENSMUSG00000070501.15|interferon activated gene 214
mm39_v1_chr11_+_70323452_70323533	0.3219621609444988	Nkx2-1	ENSMUST00000084954.13|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000108568.10|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000079056.9|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102564.11|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000124943.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000150076.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102563.2|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2
mm39_v1_chr7_-_30262659_30262681	0.3080031567355381	Nkx2-1	ENSMUST00000043898.8|Psenen|ENSMUSG00000036835.8|presenilin enhancer gamma secretase subunit
mm39_v1_chr7_-_28824440_28824585	0.3050250428865598	Nkx2-1	ENSMUST00000214374.2|Ryr1|ENSMUSG00000030592.19|ryanodine receptor 1, skeletal muscle	ENSMUST00000179893.9|Ryr1|ENSMUSG00000030592.19|ryanodine receptor 1, skeletal muscle	ENSMUST00000032813.10|Ryr1|ENSMUSG00000030592.19|ryanodine receptor 1, skeletal muscle
mm39_v1_chr5_-_97259424_97259445	0.2958061627022426	Nkx2-1	ENSMUST00000112969.10|Paqr3|ENSMUSG00000055725.12|progestin and adipoQ receptor family member III
mm39_v1_chr11_-_118139312_118139330	0.29138446869809875	Nkx2-1	ENSMUST00000100181.11|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr12_+_85871404_85871484	0.2820463535105495	Nkx2-1	ENSMUST00000177188.8|Ttll5|ENSMUSG00000012609.20|tubulin tyrosine ligase-like family, member 5	ENSMUST00000095536.10|Ttll5|ENSMUSG00000012609.20|tubulin tyrosine ligase-like family, member 5	ENSMUST00000110220.9|Ttll5|ENSMUSG00000012609.20|tubulin tyrosine ligase-like family, member 5	ENSMUST00000040179.14|Ttll5|ENSMUSG00000012609.20|tubulin tyrosine ligase-like family, member 5
mm39_v1_chr1_+_74193138_74193162	0.2811746335177293	Nkx2-1	ENSMUST00000027372.8|Cxcr2|ENSMUSG00000026180.9|chemokine (C-X-C motif) receptor 2	ENSMUST00000106899.4|Cxcr2|ENSMUSG00000026180.9|chemokine (C-X-C motif) receptor 2
mm39_v1_chr7_-_4755971_4756093	0.28015689106425407	Nkx2-1	ENSMUST00000183971.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182173.2|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182738.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182111.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000184143.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182048.2|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000063324.14|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2
mm39_v1_chr9_+_40092216_40092217	0.26908731436763134	Nkx2-1	ENSMUST00000218134.2|Olfr986|ENSMUSG00000051095.8|olfactory receptor 986	ENSMUST00000216720.2|Olfr986|ENSMUSG00000051095.8|olfactory receptor 986	ENSMUST00000214763.2|Olfr986|ENSMUSG00000051095.8|olfactory receptor 986
mm39_v1_chr6_+_113303929_113303974	0.2665265392383505	Nkx2-1	ENSMUST00000032406.15|Ogg1|ENSMUSG00000030271.15|8-oxoguanine DNA-glycosylase 1
mm39_v1_chr6_+_72281587_72281604	0.2587814300207632	Nkx2-1	ENSMUST00000183018.8|Sftpb|ENSMUSG00000056370.18|surfactant associated protein B	ENSMUST00000182014.10|Sftpb|ENSMUSG00000056370.18|surfactant associated protein B
mm39_v1_chr13_+_110039620_110039645	0.243056201854664	Nkx2-1	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr11_-_83353787_83353897	0.23965061776296295	Nkx2-1	ENSMUST00000021020.13|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)	ENSMUST00000119346.2|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)	ENSMUST00000103209.10|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)	ENSMUST00000108137.9|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)
mm39_v1_chr1_+_178356678_178356699	0.21362001405482142	Nkx2-1	ENSMUST00000161017.8|Kif26b|ENSMUSG00000026494.13|kinesin family member 26B
mm39_v1_chr15_-_64254754_64254784	0.2124636347967799	Nkx2-1	ENSMUST00000177374.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000110114.10|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000110115.9|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000023008.16|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr11_+_69920849_69920924	0.2062352172995196	Nkx2-1	ENSMUST00000143920.4|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr1_+_153750081_153750100	0.20313941106447267	Nkx2-1	ENSMUST00000055314.4|Teddm1b|ENSMUSG00000043282.4|transmembrane epididymal protein 1B
mm39_v1_chrX_+_56008685_56008685	0.19349860778313419	Nkx2-1	ENSMUST00000096431.10|Adgrg4|ENSMUSG00000053852.12|adhesion G protein-coupled receptor G4
mm39_v1_chr17_+_6157154_6157182	0.1836933186441469	Nkx2-1	ENSMUST00000149756.8|Tulp4|ENSMUSG00000034377.11|tubby like protein 4
mm39_v1_chr6_-_38276157_38276225	0.18124004795738535	Nkx2-1	ENSMUST00000058524.3|Zc3hav1l|ENSMUSG00000047749.3|zinc finger CCCH-type, antiviral 1-like
mm39_v1_chrX_+_72935708_72935720	0.17847917806203809	Nkx2-1	ENSMUST00000033765.8|Avpr2|ENSMUSG00000031390.9|arginine vasopressin receptor 2	ENSMUST00000101470.3|Avpr2|ENSMUSG00000031390.9|arginine vasopressin receptor 2	ENSMUST00000114395.2|Avpr2|ENSMUSG00000031390.9|arginine vasopressin receptor 2
mm39_v1_chrX_+_7628891_7628934	0.17748613154666035	Nkx2-1	ENSMUST00000077680.10|Tfe3|ENSMUSG00000000134.18|transcription factor E3	ENSMUST00000079542.13|Tfe3|ENSMUSG00000000134.18|transcription factor E3	ENSMUST00000115679.8|Tfe3|ENSMUSG00000000134.18|transcription factor E3	ENSMUST00000137467.8|Tfe3|ENSMUSG00000000134.18|transcription factor E3
mm39_v1_chr17_-_34847354_34847484	0.17159010085781476	Nkx2-1	ENSMUST00000167097.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr10_+_22520910_22521008	0.16836014696646118	Nkx2-1	ENSMUST00000042261.5|Slc2a12|ENSMUSG00000037490.6|solute carrier family 2 (facilitated glucose transporter), member 12
mm39_v1_chr11_+_101046708_101046748	0.16067742881077723	Nkx2-1	ENSMUST00000043654.10|Tubg2|ENSMUSG00000045007.10|tubulin, gamma 2
mm39_v1_chr1_-_80191649_80191666	0.15089542565972022	Nkx2-1	ENSMUST00000058748.2|Fam124b|ENSMUSG00000043230.3|family with sequence similarity 124, member B
mm39_v1_chr11_+_80319424_80319484	0.13972777343451262	Nkx2-1	ENSMUST00000173938.8|Psmd11|ENSMUSG00000017428.17|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	ENSMUST00000017572.14|Psmd11|ENSMUSG00000017428.17|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
mm39_v1_chr19_-_8816530_8816632	0.13895492953294997	Nkx2-1	ENSMUST00000096259.6|Gng3|ENSMUSG00000071658.6|guanine nucleotide binding protein (G protein), gamma 3
mm39_v1_chr17_-_26204621_26204770	0.13585158575982012	Nkx2-1	ENSMUST00000041641.9|Capn15|ENSMUSG00000037326.11|calpain 15	ENSMUST00000212520.2|Capn15|ENSMUSG00000037326.11|calpain 15
mm39_v1_chr18_+_49965689_49965752	0.13412035161583322	Nkx2-1	ENSMUST00000180611.8|Dmxl1|ENSMUSG00000037416.14|Dmx-like 1
mm39_v1_chr2_-_121304521_121304548	0.12274943558280292	Nkx2-1	ENSMUST00000056732.4|Mfap1b|ENSMUSG00000048222.4|microfibrillar-associated protein 1B
mm39_v1_chr7_-_30443106_30443156	0.1209875240463367	Nkx2-1	ENSMUST00000182634.8|Gapdhs|ENSMUSG00000061099.13|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
mm39_v1_chr11_+_68858942_68859001	0.11621821838826381	Nkx2-1	ENSMUST00000102606.10|Slc25a35|ENSMUSG00000018740.15|solute carrier family 25, member 35	ENSMUST00000018884.6|Slc25a35|ENSMUSG00000018740.15|solute carrier family 25, member 35
mm39_v1_chr11_+_69920956_69920981	0.11381853796314327	Nkx2-1	ENSMUST00000232115.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr13_+_12580772_12580795	0.11268533482367193	Nkx2-1	ENSMUST00000220811.2|Ero1b|ENSMUSG00000057069.8|endoplasmic reticulum oxidoreductase 1 beta
mm39_v1_chr12_+_91367764_91367796	0.11211118102140037	Nkx2-1	ENSMUST00000021346.14|Tshr|ENSMUSG00000020963.16|thyroid stimulating hormone receptor	ENSMUST00000021343.8|Tshr|ENSMUSG00000020963.16|thyroid stimulating hormone receptor
mm39_v1_chr11_-_118139331_118139397	0.10999521669571978	Nkx2-1	ENSMUST00000017276.14|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr2_-_89779008_89779008	0.10792361666924088	Nkx2-1	ENSMUST00000214846.2|Olfr1259|ENSMUSG00000068806.6|olfactory receptor 1259
mm39_v1_chr17_+_48080113_48080163	0.09689433337490483	Nkx2-1	ENSMUST00000160373.8|Tfeb|ENSMUSG00000023990.19|transcription factor EB	ENSMUST00000159641.8|Tfeb|ENSMUSG00000023990.19|transcription factor EB
mm39_v1_chr11_+_74540284_74540346	0.09454793352965316	Nkx2-1	ENSMUST00000117818.2|Cluh|ENSMUSG00000020741.18|clustered mitochondria (cluA/CLU1) homolog	ENSMUST00000092915.12|Cluh|ENSMUSG00000020741.18|clustered mitochondria (cluA/CLU1) homolog
mm39_v1_chr2_-_57004933_57005050	0.08904421415753021	Nkx2-1	ENSMUST00000028166.9|Nr4a2|ENSMUSG00000026826.14|nuclear receptor subfamily 4, group A, member 2
mm39_v1_chr1_+_43973167_43973234	0.08644427942323098	Nkx2-1	ENSMUST00000087933.10|Tpp2|ENSMUSG00000041763.15|tripeptidyl peptidase II	ENSMUST00000188313.7|Tpp2|ENSMUSG00000041763.15|tripeptidyl peptidase II
mm39_v1_chr11_-_96807192_96807231	0.07702287926950778	Nkx2-1	ENSMUST00000144731.8|Cdk5rap3|ENSMUSG00000018669.15|CDK5 regulatory subunit associated protein 3	ENSMUST00000127048.8|Cdk5rap3|ENSMUSG00000018669.15|CDK5 regulatory subunit associated protein 3
mm39_v1_chr15_-_64254585_64254694	0.07412365672440438	Nkx2-1	ENSMUST00000176384.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000175799.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr2_+_177760768_177760955	0.07038126532605798	Nkx2-1	ENSMUST00000108917.8|Phactr3|ENSMUSG00000027525.19|phosphatase and actin regulator 3
mm39_v1_chr1_-_162726234_162726297	0.06779610867011746	Nkx2-1	ENSMUST00000111510.8|Fmo2|ENSMUSG00000040170.14|flavin containing monooxygenase 2	ENSMUST00000045902.13|Fmo2|ENSMUSG00000040170.14|flavin containing monooxygenase 2
mm39_v1_chr7_+_34885782_34885833	0.06558422495656402	Nkx2-1	ENSMUST00000135452.8|Slc7a10|ENSMUSG00000030495.13|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	ENSMUST00000001854.12|Slc7a10|ENSMUSG00000030495.13|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
mm39_v1_chrX_+_57075981_57076003	0.062339450155652495	Nkx2-1	ENSMUST00000088627.11|Zic3|ENSMUSG00000067860.12|zinc finger protein of the cerebellum 3
mm39_v1_chr13_+_38009951_38009980	0.0619301080364922	Nkx2-1	ENSMUST00000138043.8|Rreb1|ENSMUSG00000039087.18|ras responsive element binding protein 1
mm39_v1_chr3_+_88439616_88439703	0.06108615965419687	Nkx2-1	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chr7_-_45463701_45463745	0.05528838648396543	Nkx2-1	ENSMUST00000210898.2|Cyth2|ENSMUSG00000003269.18|cytohesin 2	ENSMUST00000107729.10|Cyth2|ENSMUSG00000003269.18|cytohesin 2	ENSMUST00000056820.13|Cyth2|ENSMUSG00000003269.18|cytohesin 2
mm39_v1_chr1_-_136273811_136273884	0.05450584279528283	Nkx2-1	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chrX_+_57076359_57076378	0.052851204570333786	Nkx2-1	ENSMUST00000088631.11|Zic3|ENSMUSG00000067860.12|zinc finger protein of the cerebellum 3	ENSMUST00000088629.4|Zic3|ENSMUSG00000067860.12|zinc finger protein of the cerebellum 3
mm39_v1_chr6_+_127554931_127554943	0.05256876874757749	Nkx2-1	ENSMUST00000071563.5|Cracr2a|ENSMUSG00000061414.9|calcium release activated channel regulator 2A
mm39_v1_chr4_+_62278932_62278995	0.05094242574717266	Nkx2-1	ENSMUST00000084526.12|Slc31a1|ENSMUSG00000066150.13|solute carrier family 31, member 1
mm39_v1_chr16_-_92622659_92622737	0.04677676905329782	Nkx2-1	ENSMUST00000186296.2|Runx1|ENSMUSG00000022952.18|runt related transcription factor 1
mm39_v1_chr15_+_76579885_76579916	0.045296376160543925	Nkx2-1	ENSMUST00000231028.2|Gpt|ENSMUSG00000022546.6|glutamic pyruvic transaminase, soluble
mm39_v1_chr14_-_14651778_14651816	0.036107865580401195	Nkx2-1	ENSMUST00000052678.9|Flnb|ENSMUSG00000025278.10|filamin, beta
mm39_v1_chr18_-_68562385_68562392	0.03562331427608576	Nkx2-1	ENSMUST00000052347.8|Mc2r|ENSMUSG00000045569.8|melanocortin 2 receptor
mm39_v1_chr13_+_55782814_55782864	0.035511756324835865	Nkx2-1	ENSMUST00000172272.8|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000099479.4|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000223736.2|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46
mm39_v1_chr18_+_24842493_24842512	0.03037757632498799	Nkx2-1	ENSMUST00000037097.9|Fhod3|ENSMUSG00000034295.11|formin homology 2 domain containing 3	ENSMUST00000234526.2|Fhod3|ENSMUSG00000034295.11|formin homology 2 domain containing 3	ENSMUST00000234834.2|Fhod3|ENSMUSG00000034295.11|formin homology 2 domain containing 3
mm39_v1_chr15_+_80118269_80118372	0.029600509312148932	Nkx2-1	ENSMUST00000229138.2|Mief1|ENSMUSG00000022412.15|mitochondrial elongation factor 1	ENSMUST00000166030.2|Mief1|ENSMUSG00000022412.15|mitochondrial elongation factor 1
mm39_v1_chr11_-_118139418_118139433	0.02816582842914391	Nkx2-1	ENSMUST00000106305.9|Cyth1|ENSMUSG00000017132.18|cytohesin 1
mm39_v1_chr9_+_110075133_110075304	0.027984607938147932	Nkx2-1	ENSMUST00000199736.2|Cspg5|ENSMUSG00000032482.10|chondroitin sulfate proteoglycan 5
mm39_v1_chrX_+_143471903_143471903	0.02699013492459148	Nkx2-1	ENSMUST00000112843.2|Rtl4|ENSMUSG00000071679.5|retrotransposon Gag like 4
mm39_v1_chr2_-_73605684_73605723	0.022479081125621962	Nkx2-1	ENSMUST00000112024.10|Chn1|ENSMUSG00000056486.19|chimerin 1	ENSMUST00000180045.8|Chn1|ENSMUSG00000056486.19|chimerin 1
mm39_v1_chr8_-_13446769_13446825	0.02213177992160209	Nkx2-1	ENSMUST00000033826.4|Atp4b|ENSMUSG00000031449.11|ATPase, H+/K+ exchanging, beta polypeptide
mm39_v1_chr14_+_67470884_67471035	0.02151406503281294	Nkx2-1	ENSMUST00000176161.8|Ebf2|ENSMUSG00000022053.14|early B cell factor 2
mm39_v1_chr13_+_105218625_105218635	0.02105218936856468	Nkx2-1	ENSMUST00000022232.6|Nt5el|ENSMUSG00000021718.6|5' nucleotidase, ecto-like
mm39_v1_chr19_-_5518515_5518535	0.019521199911949495	Nkx2-1	ENSMUST00000236256.2|Ctsw|ENSMUSG00000024910.6|cathepsin W	ENSMUST00000025844.6|Ctsw|ENSMUSG00000024910.6|cathepsin W
mm39_v1_chrX_-_110372843_110372892	0.018737561354166786	Nkx2-1	ENSMUST00000096348.10|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6	ENSMUST00000113428.9|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
mm39_v1_chr19_-_5452521_5452556	0.016888217094337885	Nkx2-1	ENSMUST00000235569.2|Tsga10ip|ENSMUSG00000039330.6|testis specific 10 interacting protein
mm39_v1_chr14_+_26959975_26960003	0.015759398679153325	Nkx2-1	ENSMUST00000049206.6|Arhgef3|ENSMUSG00000021895.11|Rho guanine nucleotide exchange factor (GEF) 3
mm39_v1_chr16_-_38649107_38649116	0.015614962705798078	Nkx2-1	ENSMUST00000122078.3|Tex55|ENSMUSG00000022798.9|testis expressed 55
mm39_v1_chr5_+_92135294_92135338	0.015434248116978147	Nkx2-1	ENSMUST00000178614.3|Odaph|ENSMUSG00000096035.3|odontogenesis associated phosphoprotein
mm39_v1_chr14_-_24054352_24054367	0.014919702130271804	Nkx2-1	ENSMUST00000190339.2|Kcnma1|ENSMUSG00000063142.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
mm39_v1_chr11_+_96183294_96183334	0.014272211814241681	Nkx2-1	ENSMUST00000173432.3|Hoxb6|ENSMUSG00000000690.6|homeobox B6
mm39_v1_chr17_+_6156738_6156759	0.011913715738572946	Nkx2-1	ENSMUST00000142030.8|Tulp4|ENSMUSG00000034377.11|tubby like protein 4
mm39_v1_chr9_-_121621544_121621573	0.01175135030048357	Nkx2-1	ENSMUST00000035110.11|Hhatl|ENSMUSG00000032523.12|hedgehog acyltransferase-like
mm39_v1_chr15_-_7427815_7427832	0.011378174524790499	Nkx2-1	ENSMUST00000096494.5|Egflam|ENSMUSG00000042961.14|EGF-like, fibronectin type III and laminin G domains
mm39_v1_chrX_-_110372800_110372836	0.011142669823050667	Nkx2-1	ENSMUST00000137712.9|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
mm39_v1_chr12_-_11200306_11200374	0.009570265253866667	Nkx2-1	ENSMUST00000055673.2|Kcns3|ENSMUSG00000043673.12|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
mm39_v1_chr17_-_34847013_34847034	0.009224267231351566	Nkx2-1	ENSMUST00000166040.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chrX_-_110372733_110372745	0.009111014398525259	Nkx2-1	ENSMUST00000065976.12|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
mm39_v1_chr18_+_37397991_37397991	0.008617555079350109	Nkx2-1	ENSMUST00000052366.5|Pcdhb1|ENSMUSG00000051663.5|protocadherin beta 1
mm39_v1_chr15_-_7427759_7427804	0.00822562710372726	Nkx2-1	ENSMUST00000058593.10|Egflam|ENSMUSG00000042961.14|EGF-like, fibronectin type III and laminin G domains
mm39_v1_chr19_+_44481901_44481920	0.007971191128944293	Nkx2-1	ENSMUST00000041163.5|Wnt8b|ENSMUSG00000036961.6|wingless-type MMTV integration site family, member 8B
mm39_v1_chr5_-_145020840_145020840	0.007644999395680905	Nkx2-1	ENSMUST00000151196.2|Kpna7|ENSMUSG00000038770.18|karyopherin alpha 7 (importin alpha 8)
mm39_v1_chr11_-_120344299_120344326	0.007057697854326495	Nkx2-1	ENSMUST00000026452.3|Pde6g|ENSMUSG00000025386.3|phosphodiesterase 6G, cGMP-specific, rod, gamma
mm39_v1_chr1_+_85945790_85945806	0.006646816018126106	Nkx2-1	ENSMUST00000149469.3|Spata3|ENSMUSG00000026226.17|spermatogenesis associated 3
mm39_v1_chr9_-_4796217_4796267	0.0061096035844902955	Nkx2-1	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr18_-_66993567_66993582	0.005616801566908928	Nkx2-1	ENSMUST00000057942.4|Mc4r|ENSMUSG00000047259.4|melanocortin 4 receptor
mm39_v1_chr7_-_34974953_34974994	0.005483257762136543	Nkx2-1	ENSMUST00000238407.2|Wdr88|ENSMUSG00000118454.2|WD repeat domain 88
mm39_v1_chr4_-_44704006_44704006	0.005274207021464002	Nkx2-1	ENSMUST00000146335.8|Pax5|ENSMUSG00000014030.16|paired box 5
mm39_v1_chr1_-_155617773_155617790	0.0036636753512884436	Nkx2-1	ENSMUST00000027740.14|Lhx4|ENSMUSG00000026468.15|LIM homeobox protein 4
mm39_v1_chr18_+_37276556_37276556	0.003540411050658385	Nkx2-1	ENSMUST00000047479.3|Pcdhac2|ENSMUSG00000102697.2|protocadherin alpha subfamily C, 2
mm39_v1_chr2_-_26098293_26098305	0.0028649472341128585	Nkx2-1	ENSMUST00000054099.16|Lhx3|ENSMUSG00000026934.16|LIM homeobox protein 3
mm39_v1_chr1_+_75427080_75427161	0.0026985970092477302	Nkx2-1	ENSMUST00000113577.8|Asic4|ENSMUSG00000033007.16|acid-sensing (proton-gated) ion channel family member 4
mm39_v1_chr11_+_69920542_69920663	0.0025047004895930374	Nkx2-1	ENSMUST00000232266.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4	ENSMUST00000132597.5|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr1_+_75427343_75427378	0.002091485168485281	Nkx2-1	ENSMUST00000037708.10|Asic4|ENSMUSG00000033007.16|acid-sensing (proton-gated) ion channel family member 4
mm39_v1_chr9_-_4796142_4796159	0.002087649707476262	Nkx2-1	ENSMUST00000063508.15|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr4_-_44703413_44703413	0.001662411316114633	Nkx2-1	ENSMUST00000186542.2|Pax5|ENSMUSG00000014030.16|paired box 5
mm39_v1_chr2_-_168554774_168554882	0.0010152748400586778	Nkx2-1	ENSMUST00000123156.8|Atp9a|ENSMUSG00000027546.16|ATPase, class II, type 9A	ENSMUST00000156555.2|Atp9a|ENSMUSG00000027546.16|ATPase, class II, type 9A
mm39_v1_chr10_-_62723238_62723291	0.0009862855465028056	Nkx2-1	ENSMUST00000228901.2|Tet1|ENSMUSG00000047146.18|tet methylcytosine dioxygenase 1
mm39_v1_chr9_+_110595224_110595310	0.0009833365510909492	Nkx2-1	ENSMUST00000136695.3|Myl3|ENSMUSG00000059741.14|myosin, light polypeptide 3
mm39_v1_chr9_-_37058590_37058703	0.0007609722959073998	Nkx2-1	ENSMUST00000080754.12|Pknox2|ENSMUSG00000035934.17|Pbx/knotted 1 homeobox 2	ENSMUST00000188057.7|Pknox2|ENSMUSG00000035934.17|Pbx/knotted 1 homeobox 2	ENSMUST00000039674.13|Pknox2|ENSMUSG00000035934.17|Pbx/knotted 1 homeobox 2
mm39_v1_chr6_+_113449237_113449252	0.0007536670513340212	Nkx2-1	ENSMUST00000204447.3|Il17rc|ENSMUSG00000030281.17|interleukin 17 receptor C
mm39_v1_chr6_-_40864428_40864428	0.0007367541744379448	Nkx2-1	ENSMUST00000031937.4|Moxd2|ENSMUSG00000029885.4|monooxygenase, DBH-like 2
mm39_v1_chr7_-_144761806_144761823	0.000713259713810057	Nkx2-1	ENSMUST00000208788.2|Smim38|ENSMUSG00000109305.2|small integral membrane protein 38
mm39_v1_chr2_-_170248421_170248438	0.00043720534770109895	Nkx2-1	ENSMUST00000154650.8|Bcas1|ENSMUSG00000013523.14|breast carcinoma amplified sequence 1
mm39_v1_chr9_-_62029936_62029947	0.000347262829873227	Nkx2-1	ENSMUST00000185873.2|Glce|ENSMUSG00000032252.15|glucuronyl C5-epimerase
