mm39_v1_chr2_+_80145805_80145855	0.32229442588730983	Nkx2-9	ENSMUST00000028392.8|Dnajc10|ENSMUSG00000027006.14|DnaJ heat shock protein family (Hsp40) member C10
mm39_v1_chrM_+_7758_7775	0.21822319817478913	Nkx2-9	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.1|mitochondrially encoded ATP synthase 8
mm39_v1_chr2_+_103799873_103799876	0.19879948098225514	Nkx2-9	ENSMUST00000123437.8|Lmo2|ENSMUSG00000032698.16|LIM domain only 2
mm39_v1_chr13_+_9326513_9326657	0.19611663436328797	Nkx2-9	ENSMUST00000174552.8|Dip2c|ENSMUSG00000048264.17|disco interacting protein 2 homolog C
mm39_v1_chr16_-_35311243_35311261	0.19175106863438415	Nkx2-9	ENSMUST00000023550.9|Pdia5|ENSMUSG00000022844.9|protein disulfide isomerase associated 5
mm39_v1_chr6_-_126826077_126826096	0.1898198057751489	Nkx2-9	ENSMUST00000205002.3|Ndufa9|ENSMUSG00000000399.11|NADH:ubiquinone oxidoreductase subunit A9	ENSMUST00000088194.7|Ndufa9|ENSMUSG00000000399.11|NADH:ubiquinone oxidoreductase subunit A9
mm39_v1_chr3_+_159545309_159545390	0.17598507749938985	Nkx2-9	ENSMUST00000068952.10|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator	ENSMUST00000198878.2|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator
mm39_v1_chr12_+_24758968_24759028	0.1718686598916307	Nkx2-9	ENSMUST00000154588.2|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr12_+_24758724_24758769	0.16533272662310466	Nkx2-9	ENSMUST00000153058.8|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr11_+_117740077_117740108	0.16506309547720868	Nkx2-9	ENSMUST00000081387.11|Birc5|ENSMUSG00000017716.16|baculoviral IAP repeat-containing 5
mm39_v1_chr17_-_26080429_26080484	0.1595131754716942	Nkx2-9	ENSMUST00000079461.15|Wdr90|ENSMUSG00000073434.13|WD repeat domain 90	ENSMUST00000176923.9|Wdr90|ENSMUSG00000073434.13|WD repeat domain 90
mm39_v1_chr17_+_34062059_34062104	0.15014043735884292	Nkx2-9	ENSMUST00000002379.15|Cd320|ENSMUSG00000002308.17|CD320 antigen
mm39_v1_chr9_-_56068282_56068360	0.14843564939632353	Nkx2-9	ENSMUST00000034876.10|Tspan3|ENSMUSG00000032324.12|tetraspanin 3
mm39_v1_chr2_+_127112127_127112191	0.14633197280880067	Nkx2-9	ENSMUST00000110375.9|Stard7|ENSMUSG00000027367.17|START domain containing 7
mm39_v1_chr17_+_24939225_24939236	0.14411078332531085	Nkx2-9	ENSMUST00000146867.2|Rps2|ENSMUSG00000044533.16|ribosomal protein S2
mm39_v1_chr13_+_93441447_93441786	0.12963748950668105	Nkx2-9	ENSMUST00000109497.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109498.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000060490.11|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109492.9|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109496.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109495.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chrX_-_101232978_101233000	0.12775006499536457	Nkx2-9	ENSMUST00000033683.8|Rps4x|ENSMUSG00000031320.10|ribosomal protein S4, X-linked
mm39_v1_chr6_+_135339929_135339959	0.12037267593491949	Nkx2-9	ENSMUST00000032330.16|Emp1|ENSMUSG00000030208.16|epithelial membrane protein 1
mm39_v1_chr11_-_68864666_68864690	0.11970047097539639	Nkx2-9	ENSMUST00000038644.5|Rangrf|ENSMUSG00000032892.15|RAN guanine nucleotide release factor
mm39_v1_chr11_-_22932090_22932382	0.11897281773879535	Nkx2-9	ENSMUST00000160826.2|Commd1b|ENSMUSG00000098650.2|COMM domain containing 1B	ENSMUST00000093270.6|Commd1|ENSMUSG00000051355.19|COMM domain containing 1	ENSMUST00000071068.9|Commd1|ENSMUSG00000051355.19|COMM domain containing 1	ENSMUST00000159081.8|Commd1|ENSMUSG00000051355.19|COMM domain containing 1
mm39_v1_chr16_-_45975440_45975440	0.11734697139645961	Nkx2-9	ENSMUST00000059524.7|Gm4737|ENSMUSG00000048087.7|predicted gene 4737
mm39_v1_chr9_+_102503815_102503887	0.11342304068613053	Nkx2-9	ENSMUST00000038673.14|Anapc13|ENSMUSG00000035048.14|anaphase promoting complex subunit 13	ENSMUST00000186693.2|Anapc13|ENSMUSG00000035048.14|anaphase promoting complex subunit 13
mm39_v1_chr13_+_75987987_75988047	0.11127532509734644	Nkx2-9	ENSMUST00000022082.8|Glrx|ENSMUSG00000021591.9|glutaredoxin	ENSMUST00000223120.2|Glrx|ENSMUSG00000021591.9|glutaredoxin	ENSMUST00000220523.2|Glrx|ENSMUSG00000021591.9|glutaredoxin
mm39_v1_chr9_-_45923908_45923993	0.11102391543486853	Nkx2-9	ENSMUST00000217514.2|Pafah1b2|ENSMUSG00000003131.8|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm39_v1_chrM_+_7779_7927	0.1043971314484135	Nkx2-9	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm39_v1_chr4_-_72770859_72770886	0.095935824364563	Nkx2-9	ENSMUST00000179234.2|Aldoart1|ENSMUSG00000059343.5|aldolase 1 A, retrogene 1	ENSMUST00000078617.5|Aldoart1|ENSMUSG00000059343.5|aldolase 1 A, retrogene 1
mm39_v1_chr2_-_105832353_105832353	0.091453940141516	Nkx2-9	ENSMUST00000155811.2|Dnajc24|ENSMUSG00000027166.15|DnaJ heat shock protein family (Hsp40) member C24
mm39_v1_chr18_-_43610829_43610868	0.08817332494262595	Nkx2-9	ENSMUST00000057110.11|Eif3j2|ENSMUSG00000043424.11|eukaryotic translation initiation factor 3, subunit J2
mm39_v1_chrX_+_41238410_41238560	0.08811165637685481	Nkx2-9	ENSMUST00000127618.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr7_-_126073994_126074148	0.08619357750926919	Nkx2-9	ENSMUST00000205733.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1	ENSMUST00000205889.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1
mm39_v1_chr3_-_37180093_37180110	0.08502246895556917	Nkx2-9	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr19_-_40576782_40576815	0.08482202775513564	Nkx2-9	ENSMUST00000176939.8|Aldh18a1|ENSMUSG00000025007.14|aldehyde dehydrogenase 18 family, member A1
mm39_v1_chr19_+_43741550_43741576	0.08457039067324797	Nkx2-9	ENSMUST00000153295.2|Cutc|ENSMUSG00000025193.15|cutC copper transporter
mm39_v1_chr3_-_89152320_89152506	0.08417265099821776	Nkx2-9	ENSMUST00000107464.8|Trim46|ENSMUSG00000042766.18|tripartite motif-containing 46	ENSMUST00000090924.13|Trim46|ENSMUSG00000042766.18|tripartite motif-containing 46
mm39_v1_chr19_+_43741513_43741549	0.07592385877266397	Nkx2-9	ENSMUST00000112047.10|Cutc|ENSMUSG00000025193.15|cutC copper transporter
mm39_v1_chr1_-_66902429_66902444	0.071960807593908	Nkx2-9	ENSMUST00000027153.6|Acadl|ENSMUSG00000026003.6|acyl-Coenzyme A dehydrogenase, long-chain
mm39_v1_chr5_+_141842446_141842542	0.07010217088106302	Nkx2-9	ENSMUST00000074546.7|Sdk1|ENSMUSG00000039683.17|sidekick cell adhesion molecule 1
mm39_v1_chr6_-_142453531_142453688	0.06725133186176721	Nkx2-9	ENSMUST00000134191.3|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000239397.2|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000239395.2|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000032373.12|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B
mm39_v1_chr6_+_54249817_54249893	0.06630134426472269	Nkx2-9	ENSMUST00000204921.3|Chn2|ENSMUSG00000004633.18|chimerin 2	ENSMUST00000203091.3|Chn2|ENSMUSG00000004633.18|chimerin 2	ENSMUST00000204115.3|Chn2|ENSMUSG00000004633.18|chimerin 2	ENSMUST00000203941.3|Chn2|ENSMUSG00000004633.18|chimerin 2	ENSMUST00000204746.2|Chn2|ENSMUSG00000004633.18|chimerin 2
mm39_v1_chr15_+_58805605_58805685	0.06519650478326562	Nkx2-9	ENSMUST00000022980.5|Ndufb9|ENSMUSG00000022354.5|NADH:ubiquinone oxidoreductase subunit B9
mm39_v1_chr9_+_44238089_44238168	0.0618349456794167	Nkx2-9	ENSMUST00000054708.5|Dpagt1|ENSMUSG00000032123.6|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm39_v1_chr10_+_87926932_87926939	0.06165181528812278	Nkx2-9	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr17_+_34482183_34482230	0.06096114278049962	Nkx2-9	ENSMUST00000040828.7|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237342.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1	ENSMUST00000237866.2|H2-Ab1|ENSMUSG00000073421.7|histocompatibility 2, class II antigen A, beta 1
mm39_v1_chr5_-_35259847_35259864	0.05934989082393413	Nkx2-9	ENSMUST00000153664.2|Lrpap1|ENSMUSG00000029103.17|low density lipoprotein receptor-related protein associated protein 1
mm39_v1_chr1_-_181669891_181669949	0.056100901251955534	Nkx2-9	ENSMUST00000193028.2|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000191878.6|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000005003.12|Lbr|ENSMUSG00000004880.12|lamin B receptor
mm39_v1_chr10_+_18345706_18345729	0.0559890358354899	Nkx2-9	ENSMUST00000162891.8|Nhsl1|ENSMUSG00000039835.17|NHS-like 1	ENSMUST00000100054.4|Nhsl1|ENSMUSG00000039835.17|NHS-like 1
mm39_v1_chr16_-_92262969_92263075	0.05463261706579072	Nkx2-9	ENSMUST00000232239.2|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1	ENSMUST00000060005.15|Rcan1|ENSMUSG00000022951.17|regulator of calcineurin 1
mm39_v1_chr7_-_35017833_35017865	0.054029825646384734	Nkx2-9	ENSMUST00000079693.12|Gpatch1|ENSMUSG00000063808.15|G patch domain containing 1
mm39_v1_chr1_-_63215812_63215891	0.05320161172725531	Nkx2-9	ENSMUST00000185847.2|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000185732.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000188370.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000168099.9|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1
mm39_v1_chr15_-_98816012_98816112	0.05181639057110031	Nkx2-9	ENSMUST00000023736.10|Lmbr1l|ENSMUSG00000022999.16|limb region 1 like
mm39_v1_chr11_-_46280298_46280332	0.04987702837967241	Nkx2-9	ENSMUST00000109237.9|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr5_-_24650164_24650285	0.04800490599233963	Nkx2-9	ENSMUST00000115043.8|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase	ENSMUST00000115041.2|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase	ENSMUST00000030800.13|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase
mm39_v1_chr12_-_113802603_113802664	0.046642924584162325	Nkx2-9	ENSMUST00000103458.3|Ighv5-16|ENSMUSG00000094194.3|immunoglobulin heavy variable 5-16	ENSMUST00000193652.2|Ighv5-16|ENSMUSG00000094194.3|immunoglobulin heavy variable 5-16
mm39_v1_chrX_-_94701983_94702115	0.046333802155376295	Nkx2-9	ENSMUST00000119640.8|Zc4h2|ENSMUSG00000035062.14|zinc finger, C4H2 domain containing	ENSMUST00000120620.8|Zc4h2|ENSMUSG00000035062.14|zinc finger, C4H2 domain containing	ENSMUST00000044382.7|Zc4h2|ENSMUSG00000035062.14|zinc finger, C4H2 domain containing
mm39_v1_chr9_+_57411279_57411353	0.04615973012350326	Nkx2-9	ENSMUST00000080514.9|Rpp25|ENSMUSG00000062309.9|ribonuclease P/MRP 25 subunit
mm39_v1_chr11_-_46280336_46280351	0.04474083373549556	Nkx2-9	ENSMUST00000020664.13|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr5_-_138185438_138185499	0.04376103443707209	Nkx2-9	ENSMUST00000110937.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000139276.2|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000048698.14|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000123415.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr10_-_125164399_125164410	0.04138571370713105	Nkx2-9	ENSMUST00000063318.10|Slc16a7|ENSMUSG00000020102.16|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm39_v1_chr18_-_65527078_65527137	0.04103123714419203	Nkx2-9	ENSMUST00000035548.16|Alpk2|ENSMUSG00000032845.17|alpha-kinase 2
mm39_v1_chr7_-_126074256_126074304	0.04097640561799088	Nkx2-9	ENSMUST00000205440.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1	ENSMUST00000032978.8|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1	ENSMUST00000205340.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1
mm39_v1_chr17_+_28910393_28910419	0.04009698090362448	Nkx2-9	ENSMUST00000124886.9|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000114758.9|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14
mm39_v1_chr8_-_81607109_81607129	0.039798282512723764	Nkx2-9	ENSMUST00000034150.10|Gab1|ENSMUSG00000031714.10|growth factor receptor bound protein 2-associated protein 1
mm39_v1_chr19_+_43741431_43741503	0.03829349508853736	Nkx2-9	ENSMUST00000026199.14|Cutc|ENSMUSG00000025193.15|cutC copper transporter
mm39_v1_chr4_+_129714494_129714503	0.038094954310218136	Nkx2-9	ENSMUST00000165853.2|Ptp4a2|ENSMUSG00000028788.15|protein tyrosine phosphatase 4a2
mm39_v1_chr11_+_30904390_30904445	0.037799978765849764	Nkx2-9	ENSMUST00000020551.13|Asb3|ENSMUSG00000020305.14|ankyrin repeat and SOCS box-containing 3	ENSMUST00000117883.2|Asb3|ENSMUSG00000020305.14|ankyrin repeat and SOCS box-containing 3
mm39_v1_chr7_+_45084300_45084314	0.03629226376551826	Nkx2-9	ENSMUST00000211150.2|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr7_-_101714251_101714366	0.03625137150404952	Nkx2-9	ENSMUST00000130074.2|Rnf121|ENSMUSG00000070426.13|ring finger protein 121	ENSMUST00000131104.3|Rnf121|ENSMUSG00000070426.13|ring finger protein 121	ENSMUST00000096639.12|Rnf121|ENSMUSG00000070426.13|ring finger protein 121
mm39_v1_chr7_+_45084257_45084295	0.03538113412317078	Nkx2-9	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr1_-_63215952_63215992	0.03536665558101598	Nkx2-9	ENSMUST00000185412.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000027111.15|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000189664.2|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1
mm39_v1_chr6_+_54244116_54244133	0.0353024554584686	Nkx2-9	ENSMUST00000114402.9|Chn2|ENSMUSG00000004633.18|chimerin 2
mm39_v1_chr10_+_44943262_44943375	0.03512948909263947	Nkx2-9	ENSMUST00000099858.4|Prep|ENSMUSG00000019849.12|prolyl endopeptidase
mm39_v1_chr5_+_138185747_138185829	0.031003399657228918	Nkx2-9	ENSMUST00000110934.9|Cnpy4|ENSMUSG00000036968.16|canopy FGF signaling regulator 4
mm39_v1_chr7_-_81439173_81439238	0.030880096203900555	Nkx2-9	ENSMUST00000026092.9|3110040N11Rik|ENSMUSG00000025102.15|RIKEN cDNA 3110040N11 gene
mm39_v1_chr7_-_33929708_33929761	0.03085824751431417	Nkx2-9	ENSMUST00000038027.6|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chr5_-_138185686_138185724	0.030650761312065546	Nkx2-9	ENSMUST00000110936.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr6_-_6217021_6217125	0.029589825617939592	Nkx2-9	ENSMUST00000015256.15|Slc25a13|ENSMUSG00000015112.16|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm39_v1_chrX_+_41238193_41238289	0.02946418182610548	Nkx2-9	ENSMUST00000115073.9|Stag2|ENSMUSG00000025862.15|stromal antigen 2	ENSMUST00000115072.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr7_-_101667346_101667414	0.029311600987357477	Nkx2-9	ENSMUST00000209844.2|Il18bp|ENSMUSG00000070427.5|interleukin 18 binding protein	ENSMUST00000211502.2|Il18bp|ENSMUSG00000070427.5|interleukin 18 binding protein	ENSMUST00000094134.5|Il18bp|ENSMUSG00000070427.5|interleukin 18 binding protein
mm39_v1_chr11_-_80670815_80670871	0.02924817862258173	Nkx2-9	ENSMUST00000041065.14|Myo1d|ENSMUSG00000035441.15|myosin ID	ENSMUST00000070997.6|Myo1d|ENSMUSG00000035441.15|myosin ID
mm39_v1_chr7_-_126859790_126859881	0.02881041034126071	Nkx2-9	ENSMUST00000035276.5|Dctpp1|ENSMUSG00000042462.5|dCTP pyrophosphatase 1
mm39_v1_chr11_+_72498029_72498133	0.028386895126108796	Nkx2-9	ENSMUST00000021148.13|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1	ENSMUST00000138247.8|Ube2g1|ENSMUSG00000020794.14|ubiquitin-conjugating enzyme E2G 1
mm39_v1_chr1_-_74639723_74639781	0.028376008201996646	Nkx2-9	ENSMUST00000127938.8|Rnf25|ENSMUSG00000026171.13|ring finger protein 25	ENSMUST00000154874.8|Rnf25|ENSMUSG00000026171.13|ring finger protein 25
mm39_v1_chr6_-_71609881_71609974	0.027810789365063662	Nkx2-9	ENSMUST00000065509.11|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A	ENSMUST00000207023.2|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A
mm39_v1_chr12_-_114487525_114487579	0.026358941639472215	Nkx2-9	ENSMUST00000103495.3|Ighv10-3|ENSMUSG00000095700.3|immunoglobulin heavy variable V10-3
mm39_v1_chr1_+_9615619_9615706	0.026077712913300747	Nkx2-9	ENSMUST00000072079.9|Rrs1|ENSMUSG00000061024.9|ribosome biogenesis regulator 1
mm39_v1_chr2_+_20742115_20742152	0.025508563479734812	Nkx2-9	ENSMUST00000114606.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4	ENSMUST00000114608.3|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr7_-_110681402_110681438	0.023015994426487066	Nkx2-9	ENSMUST00000159305.2|Eif4g2|ENSMUSG00000005610.18|eukaryotic translation initiation factor 4, gamma 2
mm39_v1_chr19_-_43741363_43741441	0.022754922173871425	Nkx2-9	ENSMUST00000045562.6|Cox15|ENSMUSG00000040018.10|cytochrome c oxidase assembly protein 15
mm39_v1_chr7_+_88079465_88079495	0.022629514099535043	Nkx2-9	ENSMUST00000107256.4|Rab38|ENSMUSG00000030559.9|RAB38, member RAS oncogene family
mm39_v1_chr11_-_106679312_106679358	0.022452362398023375	Nkx2-9	ENSMUST00000021062.12|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chr1_+_61017057_61017096	0.021436685870777034	Nkx2-9	ENSMUST00000027162.12|Icos|ENSMUSG00000026009.15|inducible T cell co-stimulator	ENSMUST00000102827.4|Icos|ENSMUSG00000026009.15|inducible T cell co-stimulator
mm39_v1_chr10_+_79518138_79518308	0.021422719667692134	Nkx2-9	ENSMUST00000166603.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34	ENSMUST00000219791.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34	ENSMUST00000219930.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34	ENSMUST00000218964.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34
mm39_v1_chr12_-_113860566_113860630	0.02039436798511746	Nkx2-9	ENSMUST00000103474.5|Ighv7-1|ENSMUSG00000076665.5|immunoglobulin heavy variable 7-1
mm39_v1_chr8_+_96429665_96429698	0.019093918270512898	Nkx2-9	ENSMUST00000073139.14|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000080666.8|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4	ENSMUST00000212160.2|Ndrg4|ENSMUSG00000036564.18|N-myc downstream regulated gene 4
mm39_v1_chr11_-_46280281_46280295	0.01905873652028625	Nkx2-9	ENSMUST00000101306.4|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr1_-_168259839_168259916	0.018179578875865153	Nkx2-9	ENSMUST00000188912.7|Pbx1|ENSMUSG00000052534.16|pre B cell leukemia homeobox 1
mm39_v1_chr1_+_6557455_6557563	0.018065459514531017	Nkx2-9	ENSMUST00000140079.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18	ENSMUST00000131494.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr6_+_42263609_42263627	0.017449276744495118	Nkx2-9	ENSMUST00000238845.2|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1	ENSMUST00000031894.13|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1
mm39_v1_chr3_+_37474422_37474484	0.01709234631041902	Nkx2-9	ENSMUST00000029277.13|Spata5|ENSMUSG00000027722.15|spermatogenesis associated 5	ENSMUST00000198968.2|Spata5|ENSMUSG00000027722.15|spermatogenesis associated 5
mm39_v1_chr6_+_136530970_136531002	0.016959604441618495	Nkx2-9	ENSMUST00000189535.2|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr14_-_55950939_55950960	0.01688352284353233	Nkx2-9	ENSMUST00000168729.8|Tgm1|ENSMUSG00000022218.17|transglutaminase 1, K polypeptide	ENSMUST00000228123.2|Tgm1|ENSMUSG00000022218.17|transglutaminase 1, K polypeptide	ENSMUST00000178034.9|Tgm1|ENSMUSG00000022218.17|transglutaminase 1, K polypeptide
mm39_v1_chr8_-_81607140_81607163	0.016494003282994017	Nkx2-9	ENSMUST00000210676.2|Gab1|ENSMUSG00000031714.10|growth factor receptor bound protein 2-associated protein 1
mm39_v1_chr15_-_58805537_58805594	0.016250280780877823	Nkx2-9	ENSMUST00000226931.2|Tatdn1|ENSMUSG00000050891.11|TatD DNase domain containing 1	ENSMUST00000228538.3|Tatdn1|ENSMUSG00000050891.11|TatD DNase domain containing 1	ENSMUST00000110155.3|Tatdn1|ENSMUSG00000050891.11|TatD DNase domain containing 1
mm39_v1_chr9_-_37524866_37524921	0.014630403031531656	Nkx2-9	ENSMUST00000214786.2|Spa17|ENSMUSG00000001948.11|sperm autoantigenic protein 17
mm39_v1_chrX_-_65347749_65347830	0.014188903533311488	Nkx2-9	ENSMUST00000033525.3|4930447F04Rik|ENSMUSG00000031182.3|RIKEN cDNA 4930447F04 gene
mm39_v1_chr10_+_94034817_94034905	0.013812768176599698	Nkx2-9	ENSMUST00000020209.16|Ndufa12|ENSMUSG00000020022.18|NADH:ubiquinone oxidoreductase subunit A12	ENSMUST00000179990.8|Ndufa12|ENSMUSG00000020022.18|NADH:ubiquinone oxidoreductase subunit A12
mm39_v1_chr7_-_33929667_33929704	0.013669162971928592	Nkx2-9	ENSMUST00000206415.2|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chr17_-_38442081_38442081	0.013531272102707055	Nkx2-9	ENSMUST00000087128.2|Olfr132|ENSMUSG00000067186.3|olfactory receptor 132
mm39_v1_chr11_-_99383938_99383963	0.013154681278203427	Nkx2-9	ENSMUST00000006969.8|Krt23|ENSMUSG00000006777.8|keratin 23
mm39_v1_chr9_-_99592116_99592138	0.012764630974352584	Nkx2-9	ENSMUST00000035048.12|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr10_-_59057570_59057669	0.012297892426578413	Nkx2-9	ENSMUST00000220156.2|Septin10|ENSMUSG00000019917.11|septin 10	ENSMUST00000165971.3|Septin10|ENSMUSG00000019917.11|septin 10
mm39_v1_chr18_+_37646674_37646674	0.012092381827605152	Nkx2-9	ENSMUST00000061405.6|Pcdhb21|ENSMUSG00000044022.6|protocadherin beta 21
mm39_v1_chr4_-_88602149_88602149	0.01152723109347428	Nkx2-9	ENSMUST00000105147.2|Ifna2|ENSMUSG00000078354.2|interferon alpha 2
mm39_v1_chr6_-_131667026_131667026	0.011205951810942829	Nkx2-9	ENSMUST00000080619.3|Tas2r114|ENSMUSG00000063478.3|taste receptor, type 2, member 114
mm39_v1_chr11_-_102837514_102837551	0.009997461732470242	Nkx2-9	ENSMUST00000057849.6|C1ql1|ENSMUSG00000045532.6|complement component 1, q subcomponent-like 1
mm39_v1_chr7_-_126074222_126074251	0.009786864211364954	Nkx2-9	ENSMUST00000205497.2|Sh2b1|ENSMUSG00000030733.11|SH2B adaptor protein 1
mm39_v1_chr12_-_114579763_114579763	0.009664684451330556	Nkx2-9	ENSMUST00000103500.2|Ighv1-12|ENSMUSG00000095416.7|immunoglobulin heavy variable V1-12
mm39_v1_chr11_+_68858942_68859001	0.008957346553064778	Nkx2-9	ENSMUST00000102606.10|Slc25a35|ENSMUSG00000018740.15|solute carrier family 25, member 35	ENSMUST00000018884.6|Slc25a35|ENSMUSG00000018740.15|solute carrier family 25, member 35
mm39_v1_chr6_-_28126124_28126194	0.008681959049552242	Nkx2-9	ENSMUST00000115324.9|Grm8|ENSMUSG00000024211.16|glutamate receptor, metabotropic 8	ENSMUST00000090512.10|Grm8|ENSMUSG00000024211.16|glutamate receptor, metabotropic 8
mm39_v1_chr8_-_46747629_46747708	0.008444145285463724	Nkx2-9	ENSMUST00000058636.9|Helt|ENSMUSG00000047171.9|helt bHLH transcription factor
mm39_v1_chr19_+_13448336_13448336	0.008341976682732647	Nkx2-9	ENSMUST00000096202.2|Olfr1474|ENSMUSG00000096273.4|olfactory receptor 1474
mm39_v1_chr15_+_100366886_100366954	0.008144573509231647	Nkx2-9	ENSMUST00000037001.10|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1	ENSMUST00000230294.2|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1
mm39_v1_chr7_-_30023320_30023320	0.008006520514578636	Nkx2-9	ENSMUST00000098586.5|Sdhaf1|ENSMUSG00000074211.5|succinate dehydrogenase complex assembly factor 1
mm39_v1_chr3_+_113824181_113824220	0.007517373445792594	Nkx2-9	ENSMUST00000123619.8|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1	ENSMUST00000092155.12|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1
mm39_v1_chr17_-_37548054_37548221	0.0075133951431207375	Nkx2-9	ENSMUST00000213328.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000214848.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000214622.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000073667.6|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000216225.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97
mm39_v1_chr16_+_17716480_17716523	0.007280034932287338	Nkx2-9	ENSMUST00000055374.8|Tssk2|ENSMUSG00000045521.8|testis-specific serine kinase 2
mm39_v1_chrX_+_134894573_134894573	0.007108200041122319	Nkx2-9	ENSMUST00000058119.9|Arxes2|ENSMUSG00000048040.9|adipocyte-related X-chromosome expressed sequence 2
mm39_v1_chr12_-_113589576_113589657	0.00682464598625203	Nkx2-9	ENSMUST00000103446.2|Ighv5-6|ENSMUSG00000094951.2|immunoglobulin heavy variable 5-6
mm39_v1_chr12_-_75463555_75463555	0.0067860520681832645	Nkx2-9	ENSMUST00000051079.4|Gphb5|ENSMUSG00000048982.4|glycoprotein hormone beta 5
mm39_v1_chr7_-_141014477_141014517	0.006769387271500635	Nkx2-9	ENSMUST00000106007.10|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000150026.2|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000202840.4|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	ENSMUST00000133206.9|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm39_v1_chr6_-_38331482_38331538	0.00665905042241181	Nkx2-9	ENSMUST00000031850.10|Zc3hav1|ENSMUSG00000029826.15|zinc finger CCCH type, antiviral 1	ENSMUST00000114898.3|Zc3hav1|ENSMUSG00000029826.15|zinc finger CCCH type, antiviral 1
mm39_v1_chr4_-_88562696_88562696	0.0066060812762532405	Nkx2-9	ENSMUST00000105149.3|Ifna13|ENSMUSG00000063376.7|interferon alpha 13
mm39_v1_chr17_+_20639425_20639425	0.006527155096272044	Nkx2-9	ENSMUST00000170076.2|Vmn1r224|ENSMUSG00000091151.3|vomeronasal 1 receptor 224
mm39_v1_chr2_-_89118298_89118358	0.006248330473289234	Nkx2-9	ENSMUST00000214593.3|Olfr1229|ENSMUSG00000075095.6|olfactory receptor 1229	ENSMUST00000213883.2|Olfr1229|ENSMUSG00000075095.6|olfactory receptor 1229
mm39_v1_chr2_+_67004178_67004218	0.00620843227810842	Nkx2-9	ENSMUST00000239009.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000238912.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2
mm39_v1_chr14_-_62530408_62530473	0.006104782491139601	Nkx2-9	ENSMUST00000063169.10|Dleu7|ENSMUSG00000048281.10|deleted in lymphocytic leukemia, 7
mm39_v1_chr13_-_32960379_32960415	0.006094585511466551	Nkx2-9	ENSMUST00000230119.2|Mylk4|ENSMUSG00000044951.18|myosin light chain kinase family, member 4
mm39_v1_chr2_-_88905433_88905433	0.006026147590000105	Nkx2-9	ENSMUST00000099797.2|Olfr1219|ENSMUSG00000075104.4|olfactory receptor 1219
mm39_v1_chr4_-_61753422_61753470	0.005922928746101668	Nkx2-9	ENSMUST00000082287.3|Mup5|ENSMUSG00000058523.3|major urinary protein 5
mm39_v1_chr18_-_3281089_3281132	0.0056763030174127906	Nkx2-9	ENSMUST00000139537.2|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator	ENSMUST00000124747.8|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr3_-_75389047_75389048	0.00556941113402373	Nkx2-9	ENSMUST00000193989.4|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49	ENSMUST00000203169.3|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49
mm39_v1_chr8_-_44080313_44080313	0.005497793682343568	Nkx2-9	ENSMUST00000056023.5|Adam34l|ENSMUSG00000050190.5|a disintegrin and metallopeptidase domain 34 like
mm39_v1_chr2_-_88854443_88854443	0.0051980787924040504	Nkx2-9	ENSMUST00000099799.5|Olfr1217|ENSMUSG00000101391.4|olfactory receptor 1217
mm39_v1_chr7_-_144761806_144761823	0.0051635228244276835	Nkx2-9	ENSMUST00000208788.2|Smim38|ENSMUSG00000109305.2|small integral membrane protein 38
mm39_v1_chr9_+_18354752_18354752	0.005134786611575735	Nkx2-9	ENSMUST00000051008.9|Mbd3l2|ENSMUSG00000047508.10|methyl-CpG binding domain protein 3-like 2
mm39_v1_chr4_-_61259997_61259999	0.004958539980573729	Nkx2-9	ENSMUST00000071005.9|Mup14|ENSMUSG00000073830.12|major urinary protein 14	ENSMUST00000075206.12|Mup14|ENSMUSG00000073830.12|major urinary protein 14
mm39_v1_chr6_+_65929546_65929605	0.004833202925679469	Nkx2-9	ENSMUST00000043382.9|4930544G11Rik|ENSMUSG00000036463.9|RIKEN cDNA 4930544G11 gene
mm39_v1_chr3_+_99203818_99203829	0.004814943425064927	Nkx2-9	ENSMUST00000150756.3|Tbx15|ENSMUSG00000027868.12|T-box 15
mm39_v1_chr10_-_78683747_78683747	0.0047726710006474144	Nkx2-9	ENSMUST00000061289.7|Olfr1356|ENSMUSG00000051190.9|olfactory receptor 1356
mm39_v1_chr11_+_114559350_114559452	0.004540300966015611	Nkx2-9	ENSMUST00000106602.10|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000077915.10|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000106599.8|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000082092.5|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38
mm39_v1_chr3_-_64317478_64317478	0.004499161364248172	Nkx2-9	ENSMUST00000170280.3|Vmn2r4|ENSMUSG00000092049.10|vomeronasal 2, receptor 4
mm39_v1_chr4_-_60222580_60222599	0.004449945408366131	Nkx2-9	ENSMUST00000095058.5|Mup8|ENSMUSG00000078687.10|major urinary protein 8	ENSMUST00000163931.8|Mup8|ENSMUSG00000078687.10|major urinary protein 8
mm39_v1_chr9_-_99592058_99592075	0.004411832179755367	Nkx2-9	ENSMUST00000136429.8|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chrX_+_136552469_136552469	0.0043364413165168855	Nkx2-9	ENSMUST00000075471.4|Il1rapl2|ENSMUSG00000059203.11|interleukin 1 receptor accessory protein-like 2
mm39_v1_chr16_+_33201164_33201206	0.004274445509853002	Nkx2-9	ENSMUST00000165418.9|Zfp148|ENSMUSG00000022811.18|zinc finger protein 148
mm39_v1_chr19_+_29675224_29675327	0.004224673923973716	Nkx2-9	ENSMUST00000025719.5|Mlana|ENSMUSG00000024806.5|melan-A
mm39_v1_chr6_-_78445846_78445861	0.004116758606215647	Nkx2-9	ENSMUST00000032089.3|Reg3g|ENSMUSG00000030017.3|regenerating islet-derived 3 gamma
mm39_v1_chr9_+_108368032_108368072	0.0039965811077635836	Nkx2-9	ENSMUST00000166103.9|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19	ENSMUST00000085044.14|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19	ENSMUST00000193678.6|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19	ENSMUST00000178075.8|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19
mm39_v1_chr4_-_21685781_21685805	0.003960614076336792	Nkx2-9	ENSMUST00000076206.11|Prdm13|ENSMUSG00000040478.15|PR domain containing 13
mm39_v1_chr4_-_60777462_60777462	0.0038904763209070535	Nkx2-9	ENSMUST00000211875.2|Mup22|ENSMUSG00000110439.2|major urinary protein 22
mm39_v1_chr3_-_154760978_154761044	0.003889878092585218	Nkx2-9	ENSMUST00000064076.6|Tnni3k|ENSMUSG00000040086.14|TNNI3 interacting kinase
mm39_v1_chr2_+_181408833_181408866	0.0038680182825807934	Nkx2-9	ENSMUST00000108756.8|Myt1|ENSMUSG00000010505.17|myelin transcription factor 1
mm39_v1_chr14_+_96118660_96118702	0.0038637750382249795	Nkx2-9	ENSMUST00000228913.2|Spertl|ENSMUSG00000034689.3|spermatid associated like	ENSMUST00000045892.3|Spertl|ENSMUSG00000034689.3|spermatid associated like
mm39_v1_chr4_-_61259801_61259801	0.003715065305544511	Nkx2-9	ENSMUST00000125461.8|Mup14|ENSMUSG00000073830.12|major urinary protein 14
mm39_v1_chr3_-_64467239_64467239	0.0036063266178433468	Nkx2-9	ENSMUST00000165012.3|Vmn2r6|ENSMUSG00000090581.10|vomeronasal 2, receptor 6
mm39_v1_chr7_-_133966588_133966613	0.0035452033142471164	Nkx2-9	ENSMUST00000172947.8|D7Ertd443e|ENSMUSG00000030994.17|DNA segment, Chr 7, ERATO Doi 443, expressed
mm39_v1_chr10_-_89342493_89342520	0.0035009989997099628	Nkx2-9	ENSMUST00000058126.15|Nr1h4|ENSMUSG00000047638.16|nuclear receptor subfamily 1, group H, member 4	ENSMUST00000105296.9|Nr1h4|ENSMUSG00000047638.16|nuclear receptor subfamily 1, group H, member 4
mm39_v1_chr7_-_85971258_85971258	0.0033331728502035383	Nkx2-9	ENSMUST00000044256.6|Olfr308|ENSMUSG00000054498.7|olfactory receptor 308
mm39_v1_chr9_-_48822399_48822441	0.003312679210896753	Nkx2-9	ENSMUST00000003826.8|Htr3a|ENSMUSG00000032269.9|5-hydroxytryptamine (serotonin) receptor 3A
mm39_v1_chr6_-_141954471_141954471	0.0031242829076467654	Nkx2-9	ENSMUST00000111832.3|Gm6614|ENSMUSG00000079263.9|predicted gene 6614
mm39_v1_chr12_+_103281188_103281224	0.003082988309212116	Nkx2-9	ENSMUST00000189885.2|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A	ENSMUST00000179363.2|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A
mm39_v1_chr11_+_87590720_87590740	0.003080011231495967	Nkx2-9	ENSMUST00000040089.5|Rnf43|ENSMUSG00000034177.16|ring finger protein 43
mm39_v1_chr6_+_24748324_24748355	0.002995570688381666	Nkx2-9	ENSMUST00000031691.3|Hyal4|ENSMUSG00000029680.3|hyaluronoglucosaminidase 4
mm39_v1_chr7_-_103427550_103427550	0.0029532052304288526	Nkx2-9	ENSMUST00000072513.4|Olfr68|ENSMUSG00000061626.7|olfactory receptor 68
mm39_v1_chr13_-_64645606_64645606	0.002935256515508387	Nkx2-9	ENSMUST00000180282.2|Fam240b|ENSMUSG00000096537.7|family with sequence similarity 240 member B
mm39_v1_chr6_-_40976413_40976427	0.0028336706927380275	Nkx2-9	ENSMUST00000166306.3|Gm2663|ENSMUSG00000096525.3|predicted gene 2663
mm39_v1_chr18_+_37102969_37102969	0.002831707550513466	Nkx2-9	ENSMUST00000194544.2|Gm37013|ENSMUSG00000102836.2|predicted gene, 37013
mm39_v1_chr14_+_53007210_53007210	0.0027485174568956205	Nkx2-9	ENSMUST00000178768.4|Trav7d-4|ENSMUSG00000094023.4|T cell receptor alpha variable 7D-4
mm39_v1_chr7_-_44318710_44318779	0.0027362694150486746	Nkx2-9	ENSMUST00000208131.2|Myh14|ENSMUSG00000030739.19|myosin, heavy polypeptide 14
mm39_v1_chr16_+_36514386_36514400	0.002635912519378835	Nkx2-9	ENSMUST00000119464.2|Ildr1|ENSMUSG00000022900.15|immunoglobulin-like domain containing receptor 1
mm39_v1_chr7_+_104236926_104236926	0.002364982697162253	Nkx2-9	ENSMUST00000098173.5|Olfr654|ENSMUSG00000073925.6|olfactory receptor 654	ENSMUST00000210457.2|Olfr654|ENSMUSG00000073925.6|olfactory receptor 654
mm39_v1_chr14_+_53129643_53129643	0.0022676380472768307	Nkx2-9	ENSMUST00000199746.5|Trav9d-2|ENSMUSG00000094914.6|T cell receptor alpha  variable 9D-2	ENSMUST00000178824.2|Trav9d-2|ENSMUSG00000094914.6|T cell receptor alpha  variable 9D-2
mm39_v1_chr7_-_103814019_103814039	0.00224540346371009	Nkx2-9	ENSMUST00000154555.2|Olfm5|ENSMUSG00000044265.17|olfactomedin 5	ENSMUST00000051137.15|Olfm5|ENSMUSG00000044265.17|olfactomedin 5
mm39_v1_chr19_-_5779648_5779717	0.002141444783078428	Nkx2-9	ENSMUST00000116558.3|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000099955.4|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000161368.2|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B
mm39_v1_chr3_+_137983250_137983256	0.002109626841519541	Nkx2-9	ENSMUST00000004232.10|Adh1|ENSMUSG00000074207.11|alcohol dehydrogenase 1 (class I)
mm39_v1_chr11_+_76792977_76792993	0.0019518047523349636	Nkx2-9	ENSMUST00000102495.8|Tmigd1|ENSMUSG00000020839.17|transmembrane and immunoglobulin domain containing 1
mm39_v1_chr1_-_194813631_194813715	0.0019417279508116422	Nkx2-9	ENSMUST00000194111.6|Cr1l|ENSMUSG00000016481.16|complement component (3b/4b) receptor 1-like	ENSMUST00000193094.6|Cr1l|ENSMUSG00000016481.16|complement component (3b/4b) receptor 1-like
mm39_v1_chr1_+_132155922_132155922	0.001919644191849246	Nkx2-9	ENSMUST00000191418.2|Lemd1|ENSMUSG00000079330.10|LEM domain containing 1
mm39_v1_chr15_-_98675142_98675142	0.0018547589638458946	Nkx2-9	ENSMUST00000166022.2|Wnt10b|ENSMUSG00000022996.16|wingless-type MMTV integration site family, member 10B
mm39_v1_chr17_+_70276068_70276083	0.0017814536662035954	Nkx2-9	ENSMUST00000133983.8|Dlgap1|ENSMUSG00000003279.18|DLG associated protein 1
mm39_v1_chr3_-_92577621_92577623	0.0017609166941642475	Nkx2-9	ENSMUST00000029530.6|Lce1a2|ENSMUSG00000068890.9|late cornified envelope 1A2
mm39_v1_chr6_-_42442130_42442130	0.0016054834830736106	Nkx2-9	ENSMUST00000216650.2|Olfr458|ENSMUSG00000068574.3|olfactory receptor 458
mm39_v1_chr4_-_61700450_61700506	0.001529137847567769	Nkx2-9	ENSMUST00000107477.2|Mup19|ENSMUSG00000078673.11|major urinary protein 19	ENSMUST00000080606.9|Mup19|ENSMUSG00000078673.11|major urinary protein 19
mm39_v1_chr9_-_75591274_75591338	0.0013600868748271085	Nkx2-9	ENSMUST00000214244.2|Scg3|ENSMUSG00000032181.8|secretogranin III	ENSMUST00000213324.2|Scg3|ENSMUSG00000032181.8|secretogranin III	ENSMUST00000034699.8|Scg3|ENSMUSG00000032181.8|secretogranin III
mm39_v1_chr2_-_111395856_111395856	0.0013518534211852647	Nkx2-9	ENSMUST00000207786.3|Olfr1295|ENSMUSG00000108919.4|olfactory receptor 1295
mm39_v1_chrX_+_90436106_90436106	0.001264909826441876	Nkx2-9	ENSMUST00000063726.5|Mageb6b1|ENSMUSG00000094861.2|MAGE family member B6B1
mm39_v1_chr6_+_42263644_42263790	0.001243473094421062	Nkx2-9	ENSMUST00000163936.8|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1
mm39_v1_chr7_-_101570393_101570437	0.0012318669489397663	Nkx2-9	ENSMUST00000106965.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000106968.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51	ENSMUST00000106967.8|Lrrc51|ENSMUSG00000064307.14|leucine rich repeat containing 51
mm39_v1_chr7_-_141014445_141014464	0.0010843425503132772	Nkx2-9	ENSMUST00000133021.2|Slc25a22|ENSMUSG00000019082.19|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm39_v1_chr11_+_58648430_58648430	0.0010710817370460095	Nkx2-9	ENSMUST00000203731.2|Olfr316|ENSMUSG00000107677.3|olfactory receptor 316
mm39_v1_chr14_+_53088747_53088747	0.0010422077617486813	Nkx2-9	ENSMUST00000103588.4|Trav13d-1|ENSMUSG00000076778.4|T cell receptor alpha variable 13D-1
mm39_v1_chr1_-_166325157_166325157	0.0010017571110418784	Nkx2-9	ENSMUST00000143922.2|Gm4846|ENSMUSG00000086056.2|predicted gene 4846
mm39_v1_chr17_+_70276210_70276241	0.0009874355388628533	Nkx2-9	ENSMUST00000060072.12|Dlgap1|ENSMUSG00000003279.18|DLG associated protein 1
mm39_v1_chr6_+_43143944_43143944	0.0009317695549968674	Nkx2-9	ENSMUST00000060243.5|Olfr437|ENSMUSG00000071481.5|olfactory receptor 437
mm39_v1_chr17_+_35284315_35284364	0.0007855175776386166	Nkx2-9	ENSMUST00000173207.8|Ly6g6c|ENSMUSG00000092586.9|lymphocyte antigen 6 complex, locus G6C
mm39_v1_chr4_-_138484889_138484937	0.000782777486288687	Nkx2-9	ENSMUST00000030526.7|Pla2g2f|ENSMUSG00000028749.8|phospholipase A2, group IIF
mm39_v1_chr15_+_100366966_100367008	0.0007097849163928639	Nkx2-9	ENSMUST00000229648.2|Letmd1|ENSMUSG00000037353.10|LETM1 domain containing 1
mm39_v1_chr11_+_69917640_69917825	0.0004561561655533738	Nkx2-9	ENSMUST00000135916.9|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4	ENSMUST00000232659.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr17_-_13070780_13070804	0.00037986605854707173	Nkx2-9	ENSMUST00000162389.2|Mas1|ENSMUSG00000068037.12|MAS1 oncogene	ENSMUST00000162119.8|Mas1|ENSMUSG00000068037.12|MAS1 oncogene	ENSMUST00000159223.8|Mas1|ENSMUSG00000068037.12|MAS1 oncogene
mm39_v1_chr14_+_53903370_53903403	0.0001752187668789268	Nkx2-9	ENSMUST00000181768.3|Trav3-3|ENSMUSG00000094828.6|T cell receptor alpha variable 3-3
