mm39_v1_chr6_-_72935382_72935421	2.272848019947638	Sox2	ENSMUST00000144337.2|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chr5_+_53748323_53748408	2.0620461709414437	Sox2	ENSMUST00000201883.4|Rbpj|ENSMUSG00000039191.13|recombination signal binding protein for immunoglobulin kappa J region
mm39_v1_chr2_-_18053158_18053260	1.8564445513566346	Sox2	ENSMUST00000066885.6|Skida1|ENSMUSG00000054074.10|SKI/DACH domain containing 1
mm39_v1_chr9_+_119978773_119978815	1.789596997809976	Sox2	ENSMUST00000068698.15|Mobp|ENSMUSG00000032517.17|myelin-associated oligodendrocytic basic protein	ENSMUST00000215512.2|Mobp|ENSMUSG00000032517.17|myelin-associated oligodendrocytic basic protein	ENSMUST00000111627.3|Mobp|ENSMUSG00000032517.17|myelin-associated oligodendrocytic basic protein	ENSMUST00000093773.8|Mobp|ENSMUSG00000032517.17|myelin-associated oligodendrocytic basic protein
mm39_v1_chr5_-_110534828_110535020	1.7733386290757123	Sox2	ENSMUST00000198834.2|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1	ENSMUST00000056124.11|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1
mm39_v1_chr1_+_39940189_39940390	1.6720802488188327	Sox2	ENSMUST00000191761.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000193682.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000195860.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000195259.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000195636.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000192509.6|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4
mm39_v1_chr4_-_62126662_62126724	1.632142394042276	Sox2	ENSMUST00000222050.2|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37	ENSMUST00000068822.4|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37
mm39_v1_chr13_+_22220000_22220040	1.5332739690254984	Sox2	ENSMUST00000110455.4|H2bc12|ENSMUSG00000062727.5|H2B clustered histone 12
mm39_v1_chr19_-_4384029_4384059	1.5297490643852698	Sox2	ENSMUST00000176653.2|Kdm2a|ENSMUSG00000054611.18|lysine (K)-specific demethylase 2A
mm39_v1_chr13_-_54835460_54835502	1.376053670702753	Sox2	ENSMUST00000129881.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44
mm39_v1_chr13_-_98951627_98951716	1.3447477249902686	Sox2	ENSMUST00000224992.2|Fcho2|ENSMUSG00000041685.17|FCH domain only 2	ENSMUST00000225840.2|Fcho2|ENSMUSG00000041685.17|FCH domain only 2
mm39_v1_chr13_+_49658249_49658292	1.2867017183154534	Sox2	ENSMUST00000051504.8|Ecm2|ENSMUSG00000043631.9|extracellular matrix protein 2, female organ and adipocyte specific
mm39_v1_chr18_-_61669641_61669665	1.1904343451266417	Sox2	ENSMUST00000237557.2|Arhgef37|ENSMUSG00000045094.9|Rho guanine nucleotide exchange factor (GEF) 37	ENSMUST00000171629.3|Arhgef37|ENSMUSG00000045094.9|Rho guanine nucleotide exchange factor (GEF) 37
mm39_v1_chr5_-_142891565_142891588	1.074024522158803	Sox2	ENSMUST00000171419.8|Actb|ENSMUSG00000029580.15|actin, beta
mm39_v1_chr8_-_18791557_18791583	1.0557886938017442	Sox2	ENSMUST00000033846.7|Angpt2|ENSMUSG00000031465.7|angiopoietin 2
mm39_v1_chr2_+_146063841_146063841	1.0539475482574727	Sox2	ENSMUST00000089257.6|Insm1|ENSMUSG00000068154.6|insulinoma-associated 1
mm39_v1_chrX_-_133062677_133062677	1.044856018622423	Sox2	ENSMUST00000033611.5|Xkrx|ENSMUSG00000031258.5|X-linked Kx blood group related, X-linked
mm39_v1_chr17_+_12338161_12338235	1.0378906390543086	Sox2	ENSMUST00000024594.9|Agpat4|ENSMUSG00000023827.9|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm39_v1_chr6_-_83433357_83433404	1.036756024035029	Sox2	ENSMUST00000186548.7|Tet3|ENSMUSG00000034832.16|tet methylcytosine dioxygenase 3
mm39_v1_chr7_-_126992776_126992839	1.0261059143502966	Sox2	ENSMUST00000165495.2|E430018J23Rik|ENSMUSG00000078580.4|RIKEN cDNA E430018J23 gene	ENSMUST00000106303.3|E430018J23Rik|ENSMUSG00000078580.4|RIKEN cDNA E430018J23 gene	ENSMUST00000074249.7|E430018J23Rik|ENSMUSG00000078580.4|RIKEN cDNA E430018J23 gene
mm39_v1_chr15_-_58078274_58078328	1.0150321348594886	Sox2	ENSMUST00000022986.8|Fbxo32|ENSMUSG00000022358.8|F-box protein 32
mm39_v1_chr11_+_45946800_45946895	1.0050093632539399	Sox2	ENSMUST00000011400.8|Adam19|ENSMUSG00000011256.17|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm39_v1_chr9_+_38491474_38491474	1.0038009264100818	Sox2	ENSMUST00000217160.3|Olfr912|ENSMUSG00000111448.3|olfactory receptor 912
mm39_v1_chr5_-_132570710_132570860	0.9910988401410175	Sox2	ENSMUST00000182974.9|Auts2|ENSMUSG00000029673.20|autism susceptibility candidate 2
mm39_v1_chr4_-_150736554_150736638	0.9879719909531256	Sox2	ENSMUST00000117997.2|Slc45a1|ENSMUSG00000039838.12|solute carrier family 45, member 1	ENSMUST00000037827.10|Slc45a1|ENSMUSG00000039838.12|solute carrier family 45, member 1
mm39_v1_chr15_-_79281056_79281091	0.986458780569999	Sox2	ENSMUST00000228472.2|Tmem184b|ENSMUSG00000009035.16|transmembrane protein 184b
mm39_v1_chr4_-_155947819_155947819	0.9854481920970516	Sox2	ENSMUST00000030949.4|Tas1r3|ENSMUSG00000029072.4|taste receptor, type 1, member 3
mm39_v1_chr13_-_22219738_22219774	0.9797656687227511	Sox2	ENSMUST00000091742.6|H2ac12|ENSMUSG00000069302.6|H2A clustered histone 12
mm39_v1_chr10_-_49664839_49664865	0.9768426507127811	Sox2	ENSMUST00000220263.2|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)	ENSMUST00000218823.2|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm39_v1_chr6_+_70703409_70703456	0.9589907936492685	Sox2	ENSMUST00000103410.3|Igkc|ENSMUSG00000076609.3|immunoglobulin kappa constant
mm39_v1_chr5_+_122781941_122782072	0.9318433948097503	Sox2	ENSMUST00000100737.10|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000121489.8|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000031425.15|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000086247.6|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7
mm39_v1_chr8_+_109441276_109441276	0.9018167119374786	Sox2	ENSMUST00000043896.10|Zfhx3|ENSMUSG00000038872.11|zinc finger homeobox 3
mm39_v1_chr6_+_15185202_15185223	0.8922176135172413	Sox2	ENSMUST00000154448.2|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr7_-_104570689_104570689	0.8849833421553277	Sox2	ENSMUST00000217177.2|Olfr667|ENSMUSG00000056782.6|olfactory receptor 667
mm39_v1_chr7_+_103754080_103754080	0.8827001811724398	Sox2	ENSMUST00000214099.2|Olfr646|ENSMUSG00000073931.4|olfactory receptor 646
mm39_v1_chr2_-_177567397_177567406	0.869816234502309	Sox2	ENSMUST00000108934.9|Zfp972|ENSMUSG00000074529.11|zinc finger protein 972	ENSMUST00000081529.11|Zfp972|ENSMUSG00000074529.11|zinc finger protein 972
mm39_v1_chr14_+_47536075_47536228	0.8671715336980438	Sox2	ENSMUST00000227554.2|Mapk1ip1l|ENSMUSG00000021840.18|mitogen-activated protein kinase 1 interacting protein 1-like
mm39_v1_chr5_-_142891686_142891727	0.8527740636506392	Sox2	ENSMUST00000106216.3|Actb|ENSMUSG00000029580.15|actin, beta
mm39_v1_chr6_-_116084810_116084841	0.8461421356769246	Sox2	ENSMUST00000204353.3|Tmcc1|ENSMUSG00000030126.18|transmembrane and coiled coil domains 1
mm39_v1_chr7_+_112278520_112278532	0.8423119734872776	Sox2	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr1_+_39940043_39940123	0.839190362292158	Sox2	ENSMUST00000168431.7|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4	ENSMUST00000163854.9|Map4k4|ENSMUSG00000026074.16|mitogen-activated protein kinase kinase kinase kinase 4
mm39_v1_chr14_-_67106037_67106137	0.8319420712608416	Sox2	ENSMUST00000022629.9|Dpysl2|ENSMUSG00000022048.9|dihydropyrimidinase-like 2
mm39_v1_chr1_+_136059101_136059142	0.8198557819260448	Sox2	ENSMUST00000075164.11|Kif21b|ENSMUSG00000041642.19|kinesin family member 21B
mm39_v1_chr11_+_58839716_58839746	0.8180671535962508	Sox2	ENSMUST00000078267.5|H2bu2|ENSMUSG00000056895.5|H2B.U histone 2
mm39_v1_chr2_-_121211410_121211428	0.8146032251168447	Sox2	ENSMUST00000038389.15|Strc|ENSMUSG00000033498.15|stereocilin
mm39_v1_chr1_-_60605867_60605938	0.8119843338088695	Sox2	ENSMUST00000027168.12|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000090293.11|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000140485.8|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm39_v1_chr7_+_26895206_26895255	0.8069921045010281	Sox2	ENSMUST00000179391.8|BC024978|ENSMUSG00000078786.10|cDNA sequence BC024978	ENSMUST00000108379.8|BC024978|ENSMUSG00000078786.10|cDNA sequence BC024978
mm39_v1_chr12_-_45120895_45121089	0.806302316115315	Sox2	ENSMUST00000120531.8|Stxbp6|ENSMUSG00000046314.17|syntaxin binding protein 6 (amisyn)	ENSMUST00000143376.8|Stxbp6|ENSMUSG00000046314.17|syntaxin binding protein 6 (amisyn)
mm39_v1_chr6_-_72935468_72935479	0.7995331422095066	Sox2	ENSMUST00000114050.8|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chr1_+_132119169_132119195	0.7917615944820713	Sox2	ENSMUST00000188169.7|Lemd1|ENSMUSG00000079330.10|LEM domain containing 1	ENSMUST00000112357.9|Lemd1|ENSMUSG00000079330.10|LEM domain containing 1	ENSMUST00000188175.2|Gm29695|ENSMUSG00000118219.2|predicted gene, 29695
mm39_v1_chr6_-_87312743_87312748	0.791475093101527	Sox2	ENSMUST00000042025.12|Antxr1|ENSMUSG00000033420.13|anthrax toxin receptor 1	ENSMUST00000205033.2|Antxr1|ENSMUSG00000033420.13|anthrax toxin receptor 1
mm39_v1_chr14_+_26761023_26761036	0.7773655635394104	Sox2	ENSMUST00000223942.2|Il17rd|ENSMUSG00000040717.7|interleukin 17 receptor D
mm39_v1_chr6_-_72935171_72935285	0.771622505405491	Sox2	ENSMUST00000114049.2|Tmsb10|ENSMUSG00000079523.9|thymosin, beta 10
mm39_v1_chrX_+_35375751_35375766	0.7654282989167185	Sox2	ENSMUST00000033418.8|Il13ra1|ENSMUSG00000017057.10|interleukin 13 receptor, alpha 1
mm39_v1_chr16_+_36097313_36097435	0.7597303051354524	Sox2	ENSMUST00000232150.2|Stfa1|ENSMUSG00000071562.7|stefin A1
mm39_v1_chr6_-_136781406_136781425	0.7413759973112868	Sox2	ENSMUST00000179285.3|H4f16|ENSMUSG00000096010.3|H4 histone 16
mm39_v1_chr6_-_28831746_28831746	0.7388464442347116	Sox2	ENSMUST00000062304.7|Lrrc4|ENSMUSG00000049939.7|leucine rich repeat containing 4
mm39_v1_chr10_+_128295159_128295197	0.7317187520053007	Sox2	ENSMUST00000026433.9|Smarcc2|ENSMUSG00000025369.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	ENSMUST00000099131.11|Smarcc2|ENSMUSG00000025369.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	ENSMUST00000105235.10|Smarcc2|ENSMUSG00000025369.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm39_v1_chr7_-_3848050_3848050	0.7313570929560468	Sox2	ENSMUST00000108615.10|Pira2|ENSMUSG00000089942.10|paired-Ig-like receptor A2	ENSMUST00000119469.2|Pira2|ENSMUSG00000089942.10|paired-Ig-like receptor A2
mm39_v1_chr15_-_79543090_79543157	0.7236579800219918	Sox2	ENSMUST00000109648.9|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A
mm39_v1_chr1_-_34882045_34882067	0.7123512991044826	Sox2	ENSMUST00000170092.8|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr11_+_114742619_114742706	0.7123496509989197	Sox2	ENSMUST00000053361.12|Gprc5c|ENSMUSG00000051043.17|G protein-coupled receptor, family C, group 5, member C	ENSMUST00000021071.14|Gprc5c|ENSMUSG00000051043.17|G protein-coupled receptor, family C, group 5, member C	ENSMUST00000136785.2|Gprc5c|ENSMUSG00000051043.17|G protein-coupled receptor, family C, group 5, member C
mm39_v1_chr9_+_61280501_61280720	0.7113427900218846	Sox2	ENSMUST00000162583.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000161993.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000160882.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000160724.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000162973.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000159050.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3
mm39_v1_chr1_+_178146689_178146703	0.7098490038000471	Sox2	ENSMUST00000027781.7|Cox20|ENSMUSG00000026500.7|cytochrome c oxidase assembly protein 20
mm39_v1_chr2_+_11647610_11647623	0.7075503795240708	Sox2	ENSMUST00000028111.6|Il2ra|ENSMUSG00000026770.6|interleukin 2 receptor, alpha chain
mm39_v1_chr7_-_28297565_28297610	0.7051563454287038	Sox2	ENSMUST00000040531.9|Samd4b|ENSMUSG00000109336.2|sterile alpha motif domain containing 4B	ENSMUST00000108283.8|Pak4|ENSMUSG00000030602.14|p21 (RAC1) activated kinase 4
mm39_v1_chr7_+_99184858_99184981	0.699706939400068	Sox2	ENSMUST00000032995.15|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000162404.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr1_-_176641607_176641633	0.6975144975217222	Sox2	ENSMUST00000195717.6|Cep170|ENSMUSG00000057335.12|centrosomal protein 170	ENSMUST00000192961.6|Cep170|ENSMUSG00000057335.12|centrosomal protein 170
mm39_v1_chr5_+_147366953_147367027	0.694822278077867	Sox2	ENSMUST00000031651.15|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr9_+_61280764_61280817	0.690254148682276	Sox2	ENSMUST00000160541.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000161207.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3	ENSMUST00000159630.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3
mm39_v1_chr8_+_3543131_3543212	0.6883723465571083	Sox2	ENSMUST00000061508.8|Zfp358|ENSMUSG00000047264.9|zinc finger protein 358	ENSMUST00000207318.2|Zfp358|ENSMUSG00000047264.9|zinc finger protein 358
mm39_v1_chr12_-_31763859_31763946	0.6782312514027723	Sox2	ENSMUST00000057783.6|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000236002.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000174480.3|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000176710.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22
mm39_v1_chr6_-_42669963_42670016	0.6762054294071909	Sox2	ENSMUST00000045140.5|Tcaf1|ENSMUSG00000036667.15|TRPM8 channel-associated factor 1
mm39_v1_chr11_-_77380492_77380527	0.6672751729328973	Sox2	ENSMUST00000037593.14|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b	ENSMUST00000092892.10|Ankrd13b|ENSMUSG00000037907.17|ankyrin repeat domain 13b
mm39_v1_chr16_+_57369595_57369620	0.6668178295781241	Sox2	ENSMUST00000159414.2|Filip1l|ENSMUSG00000043336.15|filamin A interacting protein 1-like
mm39_v1_chr17_-_32503107_32503137	0.6586698484204355	Sox2	ENSMUST00000237692.2|Brd4|ENSMUSG00000024002.19|bromodomain containing 4
mm39_v1_chr17_-_36220924_36220971	0.654548446345204	Sox2	ENSMUST00000141662.8|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1	ENSMUST00000056034.13|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1	ENSMUST00000077494.13|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1	ENSMUST00000149277.8|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1	ENSMUST00000061052.12|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1
mm39_v1_chr13_-_54835508_54835623	0.6542019543391538	Sox2	ENSMUST00000177950.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44	ENSMUST00000146931.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44
mm39_v1_chr4_-_70453140_70453224	0.6496832950925951	Sox2	ENSMUST00000107359.9|Megf9|ENSMUSG00000039270.10|multiple EGF-like-domains 9
mm39_v1_chr8_+_123103348_123103391	0.6460974563131425	Sox2	ENSMUST00000017622.12|Zc3h18|ENSMUSG00000017478.16|zinc finger CCCH-type containing 18	ENSMUST00000093073.12|Zc3h18|ENSMUSG00000017478.16|zinc finger CCCH-type containing 18	ENSMUST00000176699.2|Zc3h18|ENSMUSG00000017478.16|zinc finger CCCH-type containing 18
mm39_v1_chr17_-_56783462_56783483	0.6457638508408458	Sox2	ENSMUST00000067538.6|Ptprs|ENSMUSG00000013236.18|protein tyrosine phosphatase, receptor type, S
mm39_v1_chr10_-_60055082_60055117	0.6392419435172237	Sox2	ENSMUST00000135158.9|Chst3|ENSMUSG00000057337.14|carbohydrate sulfotransferase 3
mm39_v1_chr8_+_123103415_123103440	0.6381816794946076	Sox2	ENSMUST00000176629.8|Zc3h18|ENSMUSG00000017478.16|zinc finger CCCH-type containing 18
mm39_v1_chr3_+_53371086_53371102	0.6346532391741848	Sox2	ENSMUST00000058577.5|Proser1|ENSMUSG00000049504.13|proline and serine rich 1
mm39_v1_chr15_+_102885467_102885467	0.632652839401919	Sox2	ENSMUST00000001706.7|Hoxc9|ENSMUSG00000036139.7|homeobox C9
mm39_v1_chr16_-_10884005_10884029	0.6264259858661508	Sox2	ENSMUST00000162323.2|Litaf|ENSMUSG00000022500.16|LPS-induced TN factor
mm39_v1_chr4_-_128699838_128699966	0.625505153238052	Sox2	ENSMUST00000106072.9|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362	ENSMUST00000170934.3|Zfp362|ENSMUSG00000028799.16|zinc finger protein 362
mm39_v1_chr1_-_85888729_85888795	0.6253451361574175	Sox2	ENSMUST00000086975.7|Gpr55|ENSMUSG00000049608.10|G protein-coupled receptor 55
mm39_v1_chr7_-_3828640_3828686	0.62450110679799	Sox2	ENSMUST00000189095.7|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000094911.5|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000153846.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000108619.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448	ENSMUST00000108620.8|Gm15448|ENSMUSG00000074419.12|predicted gene 15448
mm39_v1_chr1_+_182236728_182236750	0.6229455137427066	Sox2	ENSMUST00000117245.2|Trp53bp2|ENSMUSG00000026510.11|transformation related protein 53 binding protein 2
mm39_v1_chr17_+_32725420_32725475	0.6217045554319504	Sox2	ENSMUST00000235238.2|Cyp4f17|ENSMUSG00000091586.3|cytochrome P450, family 4, subfamily f, polypeptide 17	ENSMUST00000165999.2|Cyp4f17|ENSMUSG00000091586.3|cytochrome P450, family 4, subfamily f, polypeptide 17
mm39_v1_chr10_-_84276454_84276468	0.6187326123922883	Sox2	ENSMUST00000020220.15|Nuak1|ENSMUSG00000020032.15|NUAK family, SNF1-like kinase, 1
mm39_v1_chr1_+_132973724_132973820	0.6185118801314868	Sox2	ENSMUST00000077730.7|Pik3c2b|ENSMUSG00000026447.18|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
mm39_v1_chrX_-_142716200_142716307	0.6143899456496267	Sox2	ENSMUST00000112851.8|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000112856.3|Dcx|ENSMUSG00000031285.15|doublecortin	ENSMUST00000033642.10|Dcx|ENSMUSG00000031285.15|doublecortin
mm39_v1_chr7_+_107585900_107585900	0.6128165602074503	Sox2	ENSMUST00000214677.2|Olfr477|ENSMUSG00000096151.3|olfactory receptor 477
mm39_v1_chr2_-_69416365_69416409	0.6127597888382901	Sox2	ENSMUST00000100051.9|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2	ENSMUST00000092551.5|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2	ENSMUST00000080953.12|Lrp2|ENSMUSG00000027070.15|low density lipoprotein receptor-related protein 2
mm39_v1_chr2_-_27317004_27317074	0.6125515023782121	Sox2	ENSMUST00000056176.8|Vav2|ENSMUSG00000009621.19|vav 2 oncogene
mm39_v1_chr2_+_32536594_32536650	0.6095577138631589	Sox2	ENSMUST00000113272.8|Eng|ENSMUSG00000026814.17|endoglin	ENSMUST00000009705.14|Eng|ENSMUSG00000026814.17|endoglin	ENSMUST00000167841.8|Eng|ENSMUSG00000026814.17|endoglin
mm39_v1_chr18_-_46345661_46345701	0.6092559790927661	Sox2	ENSMUST00000037011.6|Trim36|ENSMUSG00000033949.13|tripartite motif-containing 36
mm39_v1_chr1_-_34882068_34882122	0.6071118920245235	Sox2	ENSMUST00000185231.2|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B	ENSMUST00000191307.7|Fam168b|ENSMUSG00000037503.13|family with sequence similarity 168, member B
mm39_v1_chr2_-_25873068_25873167	0.6052352974043639	Sox2	ENSMUST00000127823.2|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000134882.8|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1
mm39_v1_chr6_+_137229427_137229472	0.6027986439937701	Sox2	ENSMUST00000077115.13|Ptpro|ENSMUSG00000030223.15|protein tyrosine phosphatase, receptor type, O
mm39_v1_chr5_-_142803135_142803175	0.6001755257372635	Sox2	ENSMUST00000198181.2|Tnrc18|ENSMUSG00000039477.17|trinucleotide repeat containing 18
mm39_v1_chr4_-_34882917_34882964	0.5962750836327617	Sox2	ENSMUST00000098163.9|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292	ENSMUST00000047950.6|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292
mm39_v1_chr7_-_3901119_3901140	0.5918487625093262	Sox2	ENSMUST00000070639.8|Gm14548|ENSMUSG00000074417.10|predicted gene 14548
mm39_v1_chr17_-_32503060_32503092	0.5916393677330544	Sox2	ENSMUST00000003726.16|Brd4|ENSMUSG00000024002.19|bromodomain containing 4	ENSMUST00000121285.8|Brd4|ENSMUSG00000024002.19|bromodomain containing 4	ENSMUST00000120276.9|Brd4|ENSMUSG00000024002.19|bromodomain containing 4
mm39_v1_chr10_+_66932235_66932313	0.5875402108111863	Sox2	ENSMUST00000174317.8|Jmjd1c|ENSMUSG00000037876.18|jumonji domain containing 1C
mm39_v1_chr12_+_85043083_85043193	0.586728961358022	Sox2	ENSMUST00000168977.8|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1	ENSMUST00000021670.15|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1
mm39_v1_chr6_-_38852899_38852919	0.5849378122923465	Sox2	ENSMUST00000160360.2|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr12_-_99378855_99378870	0.582206855018472	Sox2	ENSMUST00000177269.2|Foxn3|ENSMUSG00000033713.13|forkhead box N3
mm39_v1_chr12_+_24701273_24701410	0.5821592806129093	Sox2	ENSMUST00000020982.7|Klf11|ENSMUSG00000020653.13|Kruppel-like factor 11
mm39_v1_chr2_+_180829040_180829141	0.5786712758622984	Sox2	ENSMUST00000016488.13|Ppdpf|ENSMUSG00000016344.15|pancreatic progenitor cell differentiation and proliferation factor	ENSMUST00000108841.2|Ppdpf|ENSMUSG00000016344.15|pancreatic progenitor cell differentiation and proliferation factor
mm39_v1_chr6_-_38852857_38852871	0.5757775217927749	Sox2	ENSMUST00000162359.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr4_-_63321591_63321613	0.5754255520520004	Sox2	ENSMUST00000035724.5|Akna|ENSMUSG00000039158.12|AT-hook transcription factor
mm39_v1_chr10_-_95159933_95159979	0.5735934538874515	Sox2	ENSMUST00000053594.7|Cradd|ENSMUSG00000045867.11|CASP2 and RIPK1 domain containing adaptor with death domain
mm39_v1_chr16_-_36188086_36188128	0.5720603010988133	Sox2	ENSMUST00000096089.3|Cstdc5|ENSMUSG00000071561.3|cystatin domain containing 5
mm39_v1_chr3_-_75864195_75864266	0.5701525182466278	Sox2	ENSMUST00000038563.14|Golim4|ENSMUSG00000034109.16|golgi integral membrane protein 4	ENSMUST00000167078.8|Golim4|ENSMUSG00000034109.16|golgi integral membrane protein 4	ENSMUST00000117242.8|Golim4|ENSMUSG00000034109.16|golgi integral membrane protein 4
mm39_v1_chr9_+_43655230_43655318	0.5690804659768559	Sox2	ENSMUST00000034510.9|Nectin1|ENSMUSG00000032012.10|nectin cell adhesion molecule 1
mm39_v1_chr7_+_140239843_140239843	0.5682541538828734	Sox2	ENSMUST00000218865.2|Olfr539|ENSMUSG00000059136.5|olfactory receptor 539
mm39_v1_chr2_+_156154508_156154553	0.5672528742299993	Sox2	ENSMUST00000073942.12|Cnbd2|ENSMUSG00000038085.14|cyclic nucleotide binding domain containing 2	ENSMUST00000109580.2|Cnbd2|ENSMUSG00000038085.14|cyclic nucleotide binding domain containing 2
mm39_v1_chr9_+_61280890_61280954	0.5639884286138133	Sox2	ENSMUST00000161689.8|Tle3|ENSMUSG00000032280.17|transducin-like enhancer of split 3
mm39_v1_chr1_-_139304779_139304816	0.5632227554266758	Sox2	ENSMUST00000196402.5|Crb1|ENSMUSG00000063681.15|crumbs family member 1, photoreceptor morphogenesis associated	ENSMUST00000059825.12|Crb1|ENSMUSG00000063681.15|crumbs family member 1, photoreceptor morphogenesis associated
mm39_v1_chr17_-_32074754_32074780	0.5626288910233842	Sox2	ENSMUST00000024839.6|Sik1|ENSMUSG00000024042.8|salt inducible kinase 1
mm39_v1_chr4_-_123507494_123507544	0.5562828009255073	Sox2	ENSMUST00000238866.2|Macf1|ENSMUSG00000028649.22|microtubule-actin crosslinking factor 1
mm39_v1_chr1_+_93918231_93918231	0.5544304605803245	Sox2	ENSMUST00000097632.5|Gal3st2c|ENSMUSG00000073608.5|galactose-3-O-sulfotransferase 2C
mm39_v1_chr13_+_41040657_41040675	0.5505725859316736	Sox2	ENSMUST00000069958.15|Gcnt2|ENSMUSG00000021360.17|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm39_v1_chr2_-_27365612_27365623	0.5479466199487457	Sox2	ENSMUST00000147736.2|Brd3|ENSMUSG00000026918.17|bromodomain containing 3
mm39_v1_chr16_+_16887991_16888079	0.5478772960700333	Sox2	ENSMUST00000232258.2|Ypel1|ENSMUSG00000022773.20|yippee like 1
mm39_v1_chr1_-_173569301_173569352	0.5451022310988941	Sox2	ENSMUST00000042610.15|Ifi207|ENSMUSG00000073490.12|interferon activated gene 207	ENSMUST00000127730.2|Ifi207|ENSMUSG00000073490.12|interferon activated gene 207
mm39_v1_chr19_+_4806544_4806654	0.5450636686081363	Sox2	ENSMUST00000182821.8|Rbm4b|ENSMUSG00000033760.18|RNA binding motif protein 4B	ENSMUST00000036744.8|Rbm4b|ENSMUSG00000033760.18|RNA binding motif protein 4B
mm39_v1_chr15_+_25622611_25622644	0.5437389395885822	Sox2	ENSMUST00000110457.8|Myo10|ENSMUSG00000022272.18|myosin X	ENSMUST00000137601.8|Myo10|ENSMUSG00000022272.18|myosin X
mm39_v1_chr10_-_12745109_12745231	0.5400129506901057	Sox2	ENSMUST00000218635.2|Utrn|ENSMUSG00000019820.12|utrophin
mm39_v1_chr12_+_21161722_21161778	0.5399908310242126	Sox2	ENSMUST00000064595.15|Asap2|ENSMUSG00000052632.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	ENSMUST00000101562.11|Asap2|ENSMUSG00000052632.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	ENSMUST00000090834.13|Asap2|ENSMUSG00000052632.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
mm39_v1_chr11_-_50183129_50183191	0.5279274095896286	Sox2	ENSMUST00000059458.5|Maml1|ENSMUSG00000050567.17|mastermind like transcriptional coactivator 1
mm39_v1_chr19_+_6413840_6413971	0.524142933134462	Sox2	ENSMUST00000113488.8|Sf1|ENSMUSG00000024949.18|splicing factor 1	ENSMUST00000113487.8|Sf1|ENSMUSG00000024949.18|splicing factor 1
mm39_v1_chr7_+_140261864_140261864	0.5239315401481285	Sox2	ENSMUST00000214637.3|Olfr45|ENSMUSG00000066122.7|olfactory receptor 45
mm39_v1_chr11_+_32483290_32483338	0.5233892486455451	Sox2	ENSMUST00000102821.4|Stk10|ENSMUSG00000020272.9|serine/threonine kinase 10
mm39_v1_chrX_-_16777913_16778013	0.5218011929571971	Sox2	ENSMUST00000040134.8|Ndp|ENSMUSG00000040138.8|Norrie disease (pseudoglioma) (human)
mm39_v1_chrX_-_135769285_135769504	0.5211678890346024	Sox2	ENSMUST00000058814.7|Rab9b|ENSMUSG00000043463.7|RAB9B, member RAS oncogene family
mm39_v1_chrX_-_72868544_72868592	0.5153361093509201	Sox2	ENSMUST00000002080.12|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4	ENSMUST00000114438.3|Pdzd4|ENSMUSG00000002006.13|PDZ domain containing 4
mm39_v1_chr16_-_76169902_76169991	0.5129546725712182	Sox2	ENSMUST00000054178.8|Nrip1|ENSMUSG00000048490.15|nuclear receptor interacting protein 1
mm39_v1_chr12_+_85043262_85043269	0.5062571709269297	Sox2	ENSMUST00000101202.10|Ylpm1|ENSMUSG00000021244.16|YLP motif containing 1
mm39_v1_chr17_-_29226886_29226937	0.5060588371739584	Sox2	ENSMUST00000232723.2|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr8_+_66419809_66419848	0.5058398954526074	Sox2	ENSMUST00000072482.13|Marchf1|ENSMUSG00000036469.17|membrane associated ring-CH-type finger 1
mm39_v1_chr10_+_79986988_79987212	0.5055665490115127	Sox2	ENSMUST00000146516.8|Midn|ENSMUSG00000035621.14|midnolin	ENSMUST00000144526.2|Midn|ENSMUSG00000035621.14|midnolin
mm39_v1_chr12_+_76593799_76593864	0.5043736652514248	Sox2	ENSMUST00000218380.2|Plekhg3|ENSMUSG00000052609.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	ENSMUST00000219751.2|Plekhg3|ENSMUSG00000052609.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm39_v1_chr11_+_6339442_6339471	0.5043402110987955	Sox2	ENSMUST00000109786.8|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chr11_-_18968955_18968973	0.5019845495067782	Sox2	ENSMUST00000068264.14|Meis1|ENSMUSG00000020160.19|Meis homeobox 1	ENSMUST00000185131.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr15_+_99936516_99936552	0.5012114623520155	Sox2	ENSMUST00000100203.10|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr11_-_18968979_18968990	0.49899739667410375	Sox2	ENSMUST00000144988.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr15_-_102630589_102630613	0.4985602491096387	Sox2	ENSMUST00000023818.11|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr2_+_156154219_156154347	0.49732080398978146	Sox2	ENSMUST00000037096.9|Cnbd2|ENSMUSG00000038085.14|cyclic nucleotide binding domain containing 2
mm39_v1_chr11_-_74480870_74481012	0.49587061663065274	Sox2	ENSMUST00000145524.2|Rap1gap2|ENSMUSG00000038807.20|RAP1 GTPase activating protein 2	ENSMUST00000102521.9|Rap1gap2|ENSMUSG00000038807.20|RAP1 GTPase activating protein 2
mm39_v1_chr2_-_24809583_24809628	0.49574513577366147	Sox2	ENSMUST00000046227.12|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000114432.9|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000091348.11|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000102938.10|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000150379.2|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000152161.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1	ENSMUST00000147147.8|Ehmt1|ENSMUSG00000036893.18|euchromatic histone methyltransferase 1
mm39_v1_chr7_-_29204812_29204898	0.49537630472344185	Sox2	ENSMUST00000183096.8|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3	ENSMUST00000085809.11|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3
mm39_v1_chr4_-_123558516_123558598	0.4950055230557747	Sox2	ENSMUST00000147030.2|Macf1|ENSMUSG00000028649.22|microtubule-actin crosslinking factor 1
mm39_v1_chr2_+_68691902_68691930	0.492731445947705	Sox2	ENSMUST00000176018.2|Cers6|ENSMUSG00000027035.11|ceramide synthase 6
mm39_v1_chr7_+_27878894_27878960	0.4923453743812457	Sox2	ENSMUST00000085901.13|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	ENSMUST00000172761.8|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm39_v1_chr17_-_48716756_48716934	0.4921981888570474	Sox2	ENSMUST00000160319.8|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000159535.2|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000078800.13|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000046719.14|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha	ENSMUST00000162460.8|Nfya|ENSMUSG00000023994.14|nuclear transcription factor-Y alpha
mm39_v1_chr4_+_32238712_32238804	0.4919832607052381	Sox2	ENSMUST00000108180.9|Bach2|ENSMUSG00000040270.17|BTB and CNC homology, basic leucine zipper transcription factor 2
mm39_v1_chr8_-_106485201_106485296	0.4900754970679673	Sox2	ENSMUST00000155038.3|Gfod2|ENSMUSG00000013150.16|glucose-fructose oxidoreductase domain containing 2	ENSMUST00000013294.16|Gfod2|ENSMUSG00000013150.16|glucose-fructose oxidoreductase domain containing 2
mm39_v1_chr14_+_14159978_14160002	0.48884728551218176	Sox2	ENSMUST00000137133.2|Fam107a|ENSMUSG00000021750.17|family with sequence similarity 107, member A	ENSMUST00000036070.15|Fam107a|ENSMUSG00000021750.17|family with sequence similarity 107, member A	ENSMUST00000121887.8|Fam107a|ENSMUSG00000021750.17|family with sequence similarity 107, member A
mm39_v1_chr19_+_6413703_6413749	0.4788399054602987	Sox2	ENSMUST00000131252.8|Sf1|ENSMUSG00000024949.18|splicing factor 1	ENSMUST00000113489.8|Sf1|ENSMUSG00000024949.18|splicing factor 1
mm39_v1_chr5_+_42225303_42225303	0.47730134531509555	Sox2	ENSMUST00000087332.5|Gm16223|ENSMUSG00000067285.5|predicted gene 16223
mm39_v1_chr17_-_34340918_34340962	0.47688797534062455	Sox2	ENSMUST00000151986.2|Brd2|ENSMUSG00000024335.21|bromodomain containing 2
mm39_v1_chr8_-_85526653_85526912	0.4759561283537597	Sox2	ENSMUST00000126806.2|Nfix|ENSMUSG00000001911.17|nuclear factor I/X	ENSMUST00000076715.13|Nfix|ENSMUSG00000001911.17|nuclear factor I/X
mm39_v1_chr18_+_82932747_82932788	0.47373882318307703	Sox2	ENSMUST00000071233.7|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr14_+_58308004_58308004	0.47344816491859826	Sox2	ENSMUST00000165526.9|Fgf9|ENSMUSG00000021974.16|fibroblast growth factor 9
mm39_v1_chr16_-_85347305_85347321	0.47062017833329955	Sox2	ENSMUST00000175700.8|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1	ENSMUST00000114174.3|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1
mm39_v1_chr7_+_100142544_100142593	0.4693086519904399	Sox2	ENSMUST00000126534.8|Ucp2|ENSMUSG00000033685.14|uncoupling protein 2 (mitochondrial, proton carrier)	ENSMUST00000207748.2|Ucp2|ENSMUSG00000033685.14|uncoupling protein 2 (mitochondrial, proton carrier)
mm39_v1_chr16_+_16888145_16888186	0.46867899617610115	Sox2	ENSMUST00000232574.2|Ypel1|ENSMUSG00000022773.20|yippee like 1
mm39_v1_chr4_-_148215135_148215164	0.46432205904614837	Sox2	ENSMUST00000030862.5|Draxin|ENSMUSG00000029005.5|dorsal inhibitory axon guidance protein
mm39_v1_chr6_-_36787096_36787155	0.46425701167212546	Sox2	ENSMUST00000201321.2|Ptn|ENSMUSG00000029838.12|pleiotrophin	ENSMUST00000101534.5|Ptn|ENSMUSG00000029838.12|pleiotrophin
mm39_v1_chrX_+_158491589_158491638	0.4627785229326254	Sox2	ENSMUST00000080394.13|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr3_-_57599956_57599970	0.45990210664402353	Sox2	ENSMUST00000238789.2|Ankub1|ENSMUSG00000074591.9|ankrin repeat and ubiquitin domain containing 1	ENSMUST00000197088.5|Ankub1|ENSMUSG00000074591.9|ankrin repeat and ubiquitin domain containing 1	ENSMUST00000099091.4|Ankub1|ENSMUSG00000074591.9|ankrin repeat and ubiquitin domain containing 1
mm39_v1_chr16_+_27207722_27207748	0.45791327609825816	Sox2	ENSMUST00000039443.14|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000096127.11|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr11_+_6339330_6339397	0.4559173852573669	Sox2	ENSMUST00000012612.11|Zmiz2|ENSMUSG00000041164.16|zinc finger, MIZ-type containing 2
mm39_v1_chr12_+_33197776_33197819	0.45437647192700203	Sox2	ENSMUST00000125192.9|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1	ENSMUST00000136644.8|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1
mm39_v1_chr5_+_3978032_3978178	0.4529084568096595	Sox2	ENSMUST00000143365.8|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr9_-_24685572_24685599	0.45202568665758014	Sox2	ENSMUST00000052946.12|Tbx20|ENSMUSG00000031965.16|T-box 20	ENSMUST00000166018.4|Tbx20|ENSMUSG00000031965.16|T-box 20
mm39_v1_chr12_+_112978051_112978160	0.45194273782377054	Sox2	ENSMUST00000223502.2|Pacs2|ENSMUSG00000021143.11|phosphofurin acidic cluster sorting protein 2	ENSMUST00000084891.5|Pacs2|ENSMUSG00000021143.11|phosphofurin acidic cluster sorting protein 2	ENSMUST00000220541.2|Pacs2|ENSMUSG00000021143.11|phosphofurin acidic cluster sorting protein 2
mm39_v1_chr1_-_5140504_5140511	0.45046050651005504	Sox2	ENSMUST00000147158.2|Rgs20|ENSMUSG00000002459.18|regulator of G-protein signaling 20	ENSMUST00000118000.8|Rgs20|ENSMUSG00000002459.18|regulator of G-protein signaling 20
mm39_v1_chr4_+_83335947_83335995	0.44532546975130866	Sox2	ENSMUST00000030206.10|Snapc3|ENSMUSG00000028483.14|small nuclear RNA activating complex, polypeptide 3	ENSMUST00000071544.11|Snapc3|ENSMUSG00000028483.14|small nuclear RNA activating complex, polypeptide 3
mm39_v1_chr11_-_83483807_83483913	0.44497179950228993	Sox2	ENSMUST00000019071.4|Ccl6|ENSMUSG00000018927.4|chemokine (C-C motif) ligand 6
mm39_v1_chr5_-_102217770_102217807	0.4448379994701163	Sox2	ENSMUST00000053177.14|Wdfy3|ENSMUSG00000043940.16|WD repeat and FYVE domain containing 3	ENSMUST00000174698.2|Wdfy3|ENSMUSG00000043940.16|WD repeat and FYVE domain containing 3
mm39_v1_chr7_+_96730915_96731001	0.44433108288976686	Sox2	ENSMUST00000206791.2|Gab2|ENSMUSG00000004508.7|growth factor receptor bound protein 2-associated protein 2
mm39_v1_chr14_+_26359390_26359502	0.44377259463791285	Sox2	ENSMUST00000112318.10|Arf4|ENSMUSG00000021877.13|ADP-ribosylation factor 4
mm39_v1_chr18_+_35695736_35695804	0.44197095580314705	Sox2	ENSMUST00000235851.2|Matr3|ENSMUSG00000037236.17|matrin 3	ENSMUST00000235581.2|Matr3|ENSMUSG00000037236.17|matrin 3
mm39_v1_chr9_-_110818679_110818796	0.4405523606814683	Sox2	ENSMUST00000084922.6|Rtp3|ENSMUSG00000066319.7|receptor transporter protein 3	ENSMUST00000199891.2|Rtp3|ENSMUSG00000066319.7|receptor transporter protein 3
mm39_v1_chr15_-_103242697_103242775	0.439691153046817	Sox2	ENSMUST00000229373.2|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr17_-_56783376_56783456	0.4378321892725297	Sox2	ENSMUST00000223859.2|Ptprs|ENSMUSG00000013236.18|protein tyrosine phosphatase, receptor type, S
mm39_v1_chr18_+_4921663_4921726	0.43694092304874793	Sox2	ENSMUST00000143254.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr13_-_23015518_23015518	0.4367615148395723	Sox2	ENSMUST00000226294.2|Vmn1r210|ENSMUSG00000061296.3|vomeronasal 1 receptor 210	ENSMUST00000226180.2|Vmn1r210|ENSMUSG00000061296.3|vomeronasal 1 receptor 210
mm39_v1_chr16_-_90081300_90081391	0.4355017243295696	Sox2	ENSMUST00000039280.9|Scaf4|ENSMUSG00000022983.17|SR-related CTD-associated factor 4	ENSMUST00000232371.2|Scaf4|ENSMUSG00000022983.17|SR-related CTD-associated factor 4
mm39_v1_chr5_+_21748523_21748587	0.4337730002953309	Sox2	ENSMUST00000035651.6|Lrrc17|ENSMUSG00000039883.6|leucine rich repeat containing 17
mm39_v1_chr11_+_115272732_115272759	0.43317087517445985	Sox2	ENSMUST00000053288.6|Cdr2l|ENSMUSG00000050910.6|cerebellar degeneration-related protein 2-like
mm39_v1_chr16_+_62635039_62635066	0.4319890988369578	Sox2	ENSMUST00000055557.6|Stx19|ENSMUSG00000047854.6|syntaxin 19
mm39_v1_chr6_+_65019558_65019569	0.431577223808727	Sox2	ENSMUST00000204801.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr19_-_10847121_10847304	0.4306914853453891	Sox2	ENSMUST00000120524.2|Tmem132a|ENSMUSG00000024736.16|transmembrane protein 132A	ENSMUST00000025645.14|Tmem132a|ENSMUSG00000024736.16|transmembrane protein 132A
mm39_v1_chr12_+_20004506_20004506	0.4300461916612564	Sox2	ENSMUST00000179133.2|Gm21863|ENSMUSG00000095470.2|predicted gene, 21863
mm39_v1_chr4_+_150366028_150366103	0.42856183156071387	Sox2	ENSMUST00000105682.9|Rere|ENSMUSG00000039852.18|arginine glutamic acid dipeptide (RE) repeats
mm39_v1_chr2_-_5719302_5719349	0.42850645637168583	Sox2	ENSMUST00000044009.14|Camk1d|ENSMUSG00000039145.17|calcium/calmodulin-dependent protein kinase ID
mm39_v1_chr13_+_65426624_65426717	0.4264252953883138	Sox2	ENSMUST00000126879.8|Zfp369|ENSMUSG00000021514.19|zinc finger protein 369	ENSMUST00000130799.8|Zfp369|ENSMUSG00000021514.19|zinc finger protein 369	ENSMUST00000155732.2|Zfp369|ENSMUSG00000021514.19|zinc finger protein 369
mm39_v1_chr5_-_142892457_142892509	0.42578637846292966	Sox2	ENSMUST00000167721.8|Actb|ENSMUSG00000029580.15|actin, beta	ENSMUST00000163829.2|Actb|ENSMUSG00000029580.15|actin, beta	ENSMUST00000100497.11|Actb|ENSMUSG00000029580.15|actin, beta
mm39_v1_chr11_-_62622691_62622736	0.42469698009531626	Sox2	ENSMUST00000150336.8|Zfp287|ENSMUSG00000005267.14|zinc finger protein 287
mm39_v1_chr12_-_100995242_100995302	0.4244252473196974	Sox2	ENSMUST00000085096.10|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr5_-_86824205_86824227	0.424365570347854	Sox2	ENSMUST00000038448.7|Tmprss11b|ENSMUSG00000035861.7|transmembrane protease, serine 11B
mm39_v1_chr12_+_40495951_40496015	0.42371381751886855	Sox2	ENSMUST00000037488.8|Dock4|ENSMUSG00000035954.11|dedicator of cytokinesis 4
mm39_v1_chr7_-_103535459_103535459	0.42304595090758335	Sox2	ENSMUST00000216303.2|Olfr66|ENSMUSG00000058200.3|olfactory receptor 66
mm39_v1_chr1_+_171723231_171723231	0.4214634687940773	Sox2	ENSMUST00000097466.3|Gm10521|ENSMUSG00000073492.3|predicted gene 10521
mm39_v1_chr16_+_51852435_51852580	0.4199196201616552	Sox2	ENSMUST00000227879.2|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr7_-_85065128_85065128	0.41939155407296236	Sox2	ENSMUST00000171213.3|Vmn2r69|ENSMUSG00000091006.4|vomeronasal 2, receptor 69	ENSMUST00000233336.2|Vmn2r69|ENSMUSG00000091006.4|vomeronasal 2, receptor 69
mm39_v1_chr8_-_123404811_123404921	0.41913150045104913	Sox2	ENSMUST00000006525.14|Cbfa2t3|ENSMUSG00000006362.17|CBFA2/RUNX1 translocation partner 3	ENSMUST00000064674.13|Cbfa2t3|ENSMUSG00000006362.17|CBFA2/RUNX1 translocation partner 3
mm39_v1_chr14_-_71004019_71004088	0.4188715530886586	Sox2	ENSMUST00000167242.8|Xpo7|ENSMUSG00000022100.15|exportin 7
mm39_v1_chr9_+_98305014_98305014	0.41732422912238787	Sox2	ENSMUST00000052068.11|Rbp1|ENSMUSG00000046402.11|retinol binding protein 1, cellular
mm39_v1_chr1_+_59802543_59802559	0.4139890529252914	Sox2	ENSMUST00000087435.7|Bmpr2|ENSMUSG00000067336.7|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm39_v1_chr15_-_71906051_71906076	0.413159063810368	Sox2	ENSMUST00000159993.8|Col22a1|ENSMUSG00000079022.11|collagen, type XXII, alpha 1
mm39_v1_chr3_+_138058139_138058139	0.4130055115075346	Sox2	ENSMUST00000090166.5|Adh6b|ENSMUSG00000074206.8|alcohol dehydrogenase 6B (class V)
mm39_v1_chr8_-_84963653_84963694	0.4112514867601353	Sox2	ENSMUST00000039480.7|Zswim4|ENSMUSG00000035671.7|zinc finger SWIM-type containing 4
mm39_v1_chr11_-_18968714_18968828	0.40610302669208087	Sox2	ENSMUST00000177417.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr7_-_26895561_26895696	0.4044114084695835	Sox2	ENSMUST00000122202.8|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A	ENSMUST00000080356.10|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A
mm39_v1_chr3_-_58792633_58792775	0.4036721231083242	Sox2	ENSMUST00000055636.13|Clrn1|ENSMUSG00000043850.16|clarin 1	ENSMUST00000072551.7|Clrn1|ENSMUSG00000043850.16|clarin 1	ENSMUST00000051408.8|Clrn1|ENSMUSG00000043850.16|clarin 1
mm39_v1_chr14_+_35816874_35816926	0.4035042520468337	Sox2	ENSMUST00000226305.2|4930474N05Rik|ENSMUSG00000096405.4|RIKEN cDNA 4930474N05 gene
mm39_v1_chr17_-_33979280_33979322	0.4031995177392604	Sox2	ENSMUST00000173860.8|Rab11b|ENSMUSG00000077450.14|RAB11B, member RAS oncogene family
mm39_v1_chr4_-_44167987_44168016	0.40265944235493417	Sox2	ENSMUST00000143337.2|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr17_-_7652863_7652863	0.4024615328370587	Sox2	ENSMUST00000070059.5|Unc93a2|ENSMUSG00000056133.6|unc-93 homolog A2
mm39_v1_chr2_+_27566452_27566470	0.39995594716351324	Sox2	ENSMUST00000129514.8|Rxra|ENSMUSG00000015846.16|retinoid X receptor alpha
mm39_v1_chr12_-_100995102_100995180	0.39318629474066513	Sox2	ENSMUST00000223097.2|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr14_-_19261196_19261244	0.3915559181447132	Sox2	ENSMUST00000112797.12|D830030K20Rik|ENSMUSG00000096039.9|RIKEN cDNA D830030K20 gene	ENSMUST00000225885.2|D830030K20Rik|ENSMUSG00000096039.9|RIKEN cDNA D830030K20 gene
mm39_v1_chr5_+_150042092_150042149	0.39072979910982825	Sox2	ENSMUST00000200960.4|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein	ENSMUST00000202530.4|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr11_+_69471219_69471248	0.3899821517094586	Sox2	ENSMUST00000108657.4|Trp53|ENSMUSG00000059552.14|transformation related protein 53
mm39_v1_chr9_+_59524521_59524569	0.38971239935652047	Sox2	ENSMUST00000026267.16|Parp6|ENSMUSG00000025237.17|poly (ADP-ribose) polymerase family, member 6	ENSMUST00000050483.15|Parp6|ENSMUSG00000025237.17|poly (ADP-ribose) polymerase family, member 6
mm39_v1_chr16_+_17269845_17269903	0.3878747449235133	Sox2	ENSMUST00000006293.5|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like	ENSMUST00000231228.2|Crkl|ENSMUSG00000006134.5|v-crk avian sarcoma virus CT10 oncogene homolog-like
mm39_v1_chr1_-_181847492_181847555	0.3878636408364696	Sox2	ENSMUST00000177811.8|Enah|ENSMUSG00000022995.17|ENAH actin regulator	ENSMUST00000111025.8|Enah|ENSMUSG00000022995.17|ENAH actin regulator	ENSMUST00000111024.10|Enah|ENSMUSG00000022995.17|ENAH actin regulator
mm39_v1_chr4_+_133829898_133829929	0.3854706069217522	Sox2	ENSMUST00000070246.9|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11	ENSMUST00000156750.2|Ubxn11|ENSMUSG00000012126.17|UBX domain protein 11
mm39_v1_chr3_-_64417263_64417263	0.3849563854378144	Sox2	ENSMUST00000177184.9|Vmn2r5|ENSMUSG00000068999.14|vomeronasal 2, receptor 5
mm39_v1_chr10_-_61288437_61288589	0.3830123481854541	Sox2	ENSMUST00000167087.2|Eif4ebp2|ENSMUSG00000020091.16|eukaryotic translation initiation factor 4E binding protein 2	ENSMUST00000020288.15|Eif4ebp2|ENSMUSG00000020091.16|eukaryotic translation initiation factor 4E binding protein 2
mm39_v1_chr16_-_4376471_4376647	0.38279165509627533	Sox2	ENSMUST00000230875.2|Tfap4|ENSMUSG00000005718.9|transcription factor AP4
mm39_v1_chr18_-_16942289_16942384	0.38119509021138565	Sox2	ENSMUST00000025166.14|Cdh2|ENSMUSG00000024304.15|cadherin 2
mm39_v1_chr15_-_98769056_98769085	0.38108273259601183	Sox2	ENSMUST00000178486.9|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D	ENSMUST00000023741.16|Kmt2d|ENSMUSG00000048154.18|lysine (K)-specific methyltransferase 2D
mm39_v1_chr6_-_99005835_99005903	0.3802310451569512	Sox2	ENSMUST00000154163.9|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr12_-_111638722_111638772	0.3801135334284765	Sox2	ENSMUST00000001304.9|Ckb|ENSMUSG00000001270.10|creatine kinase, brain
mm39_v1_chr12_-_72283465_72283498	0.3794565503502811	Sox2	ENSMUST00000021497.16|Rtn1|ENSMUSG00000021087.19|reticulon 1	ENSMUST00000137990.2|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr16_+_4964849_4964973	0.3794089045182177	Sox2	ENSMUST00000165810.2|Sec14l5|ENSMUSG00000091712.3|SEC14-like lipid binding 5	ENSMUST00000230616.2|Sec14l5|ENSMUSG00000091712.3|SEC14-like lipid binding 5
mm39_v1_chr8_+_125519751_125519831	0.37883272614041796	Sox2	ENSMUST00000041106.9|Trim67|ENSMUSG00000036913.16|tripartite motif-containing 67	ENSMUST00000167588.9|Trim67|ENSMUSG00000036913.16|tripartite motif-containing 67
mm39_v1_chr2_-_25873189_25873304	0.3787292004872184	Sox2	ENSMUST00000114167.9|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000091268.11|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1	ENSMUST00000183461.8|Camsap1|ENSMUSG00000026933.18|calmodulin regulated spectrin-associated protein 1
mm39_v1_chr14_+_66378382_66378404	0.3777019512512388	Sox2	ENSMUST00000022620.11|Chrna2|ENSMUSG00000022041.11|cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
mm39_v1_chr17_+_26633794_26633939	0.37653562817576486	Sox2	ENSMUST00000182897.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000183077.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B	ENSMUST00000053020.8|Neurl1b|ENSMUSG00000034413.15|neuralized E3 ubiquitin protein ligase 1B
mm39_v1_chr15_-_9529898_9529932	0.37382004961526705	Sox2	ENSMUST00000228782.2|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor	ENSMUST00000003981.6|Il7r|ENSMUSG00000003882.6|interleukin 7 receptor
mm39_v1_chr18_+_60936910_60936928	0.3729130724542549	Sox2	ENSMUST00000097563.9|Cd74|ENSMUSG00000024610.16|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	ENSMUST00000050487.16|Cd74|ENSMUSG00000024610.16|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	ENSMUST00000167610.2|Cd74|ENSMUSG00000024610.16|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm39_v1_chr7_-_43139390_43139499	0.37231836605636576	Sox2	ENSMUST00000107974.3|Iglon5|ENSMUSG00000013367.6|IgLON family member 5
mm39_v1_chr2_+_18059982_18060048	0.3719043865938114	Sox2	ENSMUST00000028076.15|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
mm39_v1_chr10_-_130291919_130291919	0.3711795603372275	Sox2	ENSMUST00000170257.4|Vmn2r86|ENSMUSG00000092162.4|vomeronasal 2, receptor 86
mm39_v1_chr2_-_160208977_160208993	0.36962385798672154	Sox2	ENSMUST00000099126.5|Mafb|ENSMUSG00000074622.5|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm39_v1_chr14_-_51162346_51162351	0.3685792068751391	Sox2	ENSMUST00000159292.8|Osgep|ENSMUSG00000006289.15|O-sialoglycoprotein endopeptidase
mm39_v1_chr7_-_44518830_44518985	0.3678876965362008	Sox2	ENSMUST00000208682.2|Ptov1|ENSMUSG00000038502.18|prostate tumor over expressed gene 1
mm39_v1_chr12_-_69728572_69728632	0.36504398307082664	Sox2	ENSMUST00000183277.8|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2	ENSMUST00000035773.14|Sos2|ENSMUSG00000034801.14|SOS Ras/Rho guanine nucleotide exchange factor 2
mm39_v1_chr9_+_18766229_18766229	0.364824098375085	Sox2	ENSMUST00000212229.3|Olfr829|ENSMUSG00000051414.6|olfactory receptor 829
mm39_v1_chr18_+_82929451_82929458	0.36480454528891854	Sox2	ENSMUST00000235902.2|Zfp516|ENSMUSG00000058881.14|zinc finger protein 516
mm39_v1_chr7_-_127324788_127324788	0.36466714578858705	Sox2	ENSMUST00000076091.4|Ctf2|ENSMUSG00000060034.6|cardiotrophin 2
mm39_v1_chr2_+_134627987_134628090	0.36238336169366003	Sox2	ENSMUST00000131552.5|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1	ENSMUST00000110116.8|Plcb1|ENSMUSG00000051177.17|phospholipase C, beta 1
mm39_v1_chr5_-_138270995_138271102	0.3617544842801646	Sox2	ENSMUST00000161665.2|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4	ENSMUST00000100530.8|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4	ENSMUST00000161279.8|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4	ENSMUST00000161647.8|Gal3st4|ENSMUSG00000075593.11|galactose-3-O-sulfotransferase 4
mm39_v1_chr7_+_4918199_4918229	0.36050016244458005	Sox2	ENSMUST00000116354.4|Zfp628|ENSMUSG00000074406.6|zinc finger protein 628
mm39_v1_chr1_-_64161415_64161455	0.36031513079764105	Sox2	ENSMUST00000135075.2|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr2_-_146353911_146353936	0.3597289185659158	Sox2	ENSMUST00000109986.9|Ralgapa2|ENSMUSG00000037110.21|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm39_v1_chr7_-_63588610_63588704	0.35866466295722677	Sox2	ENSMUST00000063694.10|Klf13|ENSMUSG00000052040.11|Kruppel-like factor 13
mm39_v1_chr2_-_18053595_18053634	0.3586599583534512	Sox2	ENSMUST00000142856.2|Skida1|ENSMUSG00000054074.10|SKI/DACH domain containing 1
mm39_v1_chr3_-_119576911_119577037	0.35764657694809304	Sox2	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr8_+_61677253_61677285	0.3571213602960315	Sox2	ENSMUST00000209611.2|Sh3rf1|ENSMUSG00000031642.10|SH3 domain containing ring finger 1
mm39_v1_chr7_+_27879650_27879692	0.35571031367314226	Sox2	ENSMUST00000172467.8|Dyrk1b|ENSMUSG00000002409.19|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm39_v1_chr9_+_100525807_100525823	0.3552527986814565	Sox2	ENSMUST00000133388.2|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr5_-_106844396_106844516	0.3522038505945876	Sox2	ENSMUST00000137285.8|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644	ENSMUST00000124263.2|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644	ENSMUST00000149128.3|Gm28039|ENSMUSG00000098302.2|predicted gene, 28039	ENSMUST00000112695.4|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644	ENSMUST00000155495.8|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644	ENSMUST00000135108.2|Zfp644|ENSMUSG00000049606.17|zinc finger protein 644
mm39_v1_chr12_-_100995305_100995346	0.35078180121413327	Sox2	ENSMUST00000068411.5|Ccdc88c|ENSMUSG00000021182.17|coiled-coil domain containing 88C
mm39_v1_chr10_-_81463631_81463631	0.3506011769457925	Sox2	ENSMUST00000042923.9|Sirt6|ENSMUSG00000034748.17|sirtuin 6
mm39_v1_chr2_-_175017664_175017664	0.34865805138959044	Sox2	ENSMUST00000109054.3|Gm14443|ENSMUSG00000078902.4|predicted gene 14443
mm39_v1_chr4_-_155870321_155870337	0.34841163425546845	Sox2	ENSMUST00000097742.3|Tmem88b|ENSMUSG00000073680.3|transmembrane protein 88B
mm39_v1_chr7_+_44865177_44865276	0.3479160259356148	Sox2	ENSMUST00000033060.14|Tead2|ENSMUSG00000030796.18|TEA domain family member 2	ENSMUST00000210447.2|Tead2|ENSMUSG00000030796.18|TEA domain family member 2	ENSMUST00000211744.2|Tead2|ENSMUSG00000030796.18|TEA domain family member 2	ENSMUST00000107801.10|Tead2|ENSMUSG00000030796.18|TEA domain family member 2
mm39_v1_chr6_-_38853097_38853167	0.3477749076689968	Sox2	ENSMUST00000161779.8|Hipk2|ENSMUSG00000061436.16|homeodomain interacting protein kinase 2
mm39_v1_chr5_-_122917341_122917496	0.3475340963400867	Sox2	ENSMUST00000198257.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000199599.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000196742.2|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000200109.5|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta	ENSMUST00000111668.8|Camkk2|ENSMUSG00000029471.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm39_v1_chr7_+_79674562_79674589	0.34656220233116986	Sox2	ENSMUST00000164056.9|Zfp710|ENSMUSG00000048897.16|zinc finger protein 710	ENSMUST00000166250.8|Zfp710|ENSMUSG00000048897.16|zinc finger protein 710
mm39_v1_chr10_+_74802996_74803035	0.3461390725808549	Sox2	ENSMUST00000037813.5|Gnaz|ENSMUSG00000040009.7|guanine nucleotide binding protein, alpha z subunit
mm39_v1_chr7_+_64151435_64151454	0.34611160278610886	Sox2	ENSMUST00000032732.15|Apba2|ENSMUSG00000030519.15|amyloid beta (A4) precursor protein-binding, family A, member 2
mm39_v1_chr2_+_92015780_92015841	0.3445992853762872	Sox2	ENSMUST00000128781.9|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A	ENSMUST00000111291.9|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A
mm39_v1_chr18_-_60881679_60881768	0.3445958499135899	Sox2	ENSMUST00000237783.2|Ndst1|ENSMUSG00000054008.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm39_v1_chr18_+_42644552_42644586	0.34410789555357674	Sox2	ENSMUST00000237602.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000236088.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000025375.15|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr9_-_50639230_50639308	0.3440810694727877	Sox2	ENSMUST00000118707.2|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1	ENSMUST00000034566.15|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr4_+_137196080_137196124	0.3424049047987862	Sox2	ENSMUST00000030547.15|Hspg2|ENSMUSG00000028763.19|perlecan (heparan sulfate proteoglycan 2)	ENSMUST00000171332.2|Hspg2|ENSMUSG00000028763.19|perlecan (heparan sulfate proteoglycan 2)
mm39_v1_chr2_+_167774247_167774300	0.34189704422665307	Sox2	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr2_-_51039112_51039127	0.341692407576696	Sox2	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chr6_+_17463819_17463833	0.3409462039525074	Sox2	ENSMUST00000140070.8|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr7_+_140641010_140641022	0.339383246349863	Sox2	ENSMUST00000048002.7|B4galnt4|ENSMUSG00000055629.6|beta-1,4-N-acetyl-galactosaminyl transferase 4
mm39_v1_chr11_+_69471185_69471208	0.3385196233959134	Sox2	ENSMUST00000171247.8|Trp53|ENSMUSG00000059552.14|transformation related protein 53	ENSMUST00000108658.10|Trp53|ENSMUSG00000059552.14|transformation related protein 53	ENSMUST00000005371.12|Trp53|ENSMUSG00000059552.14|transformation related protein 53
mm39_v1_chrX_+_158623460_158623477	0.337122777410707	Sox2	ENSMUST00000112451.8|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1	ENSMUST00000112453.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr11_-_107685383_107685555	0.33644857964528213	Sox2	ENSMUST00000021066.4|Cacng4|ENSMUSG00000020723.4|calcium channel, voltage-dependent, gamma subunit 4
mm39_v1_chr5_+_34140777_34140873	0.33470352321112473	Sox2	ENSMUST00000094869.12|Gm1673|ENSMUSG00000070858.13|predicted gene 1673	ENSMUST00000114383.8|Gm1673|ENSMUSG00000070858.13|predicted gene 1673
mm39_v1_chr8_+_36054919_36054981	0.3345998195765011	Sox2	ENSMUST00000037666.6|Mfhas1|ENSMUSG00000070056.7|malignant fibrous histiocytoma amplified sequence 1
mm39_v1_chr19_+_5524933_5524966	0.33358614569532985	Sox2	ENSMUST00000236518.2|Efemp2|ENSMUSG00000024909.16|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm39_v1_chr11_-_116303791_116303830	0.33328935029787066	Sox2	ENSMUST00000100202.10|Rnf157|ENSMUSG00000052949.15|ring finger protein 157	ENSMUST00000106398.9|Rnf157|ENSMUSG00000052949.15|ring finger protein 157
mm39_v1_chr17_-_33979442_33979504	0.3317043217253088	Sox2	ENSMUST00000057373.14|Rab11b|ENSMUSG00000077450.14|RAB11B, member RAS oncogene family
mm39_v1_chr13_-_49024583_49024642	0.32899492738869884	Sox2	ENSMUST00000035540.9|Phf2|ENSMUSG00000038025.9|PHD finger protein 2
mm39_v1_chr2_+_4564553_4564621	0.32568392368864013	Sox2	ENSMUST00000176828.8|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr1_+_64729950_64729981	0.32562011930677376	Sox2	ENSMUST00000187170.7|Ccnyl1|ENSMUSG00000070871.11|cyclin Y-like 1
mm39_v1_chr9_+_119231140_119231335	0.32520744474684093	Sox2	ENSMUST00000165044.3|Acvr2b|ENSMUSG00000061393.15|activin receptor IIB
mm39_v1_chr4_+_152181155_152181176	0.32404543622460547	Sox2	ENSMUST00000105661.10|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	ENSMUST00000084115.4|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm39_v1_chr2_-_153079828_153079854	0.3237105862315225	Sox2	ENSMUST00000109795.2|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr10_+_17598961_17598990	0.32302811000429577	Sox2	ENSMUST00000038107.9|Cited2|ENSMUSG00000039910.11|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	ENSMUST00000219558.2|Cited2|ENSMUSG00000039910.11|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	ENSMUST00000218370.2|Cited2|ENSMUSG00000039910.11|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm39_v1_chr11_+_11636213_11636284	0.3228510552023437	Sox2	ENSMUST00000076700.11|Ikzf1|ENSMUSG00000018654.18|IKAROS family zinc finger 1	ENSMUST00000048122.13|Ikzf1|ENSMUSG00000018654.18|IKAROS family zinc finger 1
mm39_v1_chr5_+_77414031_77414056	0.3213101738574393	Sox2	ENSMUST00000113449.2|Rest|ENSMUSG00000029249.16|RE1-silencing transcription factor
mm39_v1_chr8_-_85500010_85500052	0.32029234651816196	Sox2	ENSMUST00000109764.8|Nfix|ENSMUSG00000001911.17|nuclear factor I/X
mm39_v1_chr11_-_97913420_97913496	0.3197269898819181	Sox2	ENSMUST00000103144.10|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000017552.13|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000092736.11|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit	ENSMUST00000107562.2|Cacnb1|ENSMUSG00000020882.18|calcium channel, voltage-dependent, beta 1 subunit
mm39_v1_chr8_+_45960804_45960847	0.3185976131177269	Sox2	ENSMUST00000067065.14|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000124544.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000138049.9|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000132139.9|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr9_+_21527526_21527578	0.316562476807521	Sox2	ENSMUST00000174008.8|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm39_v1_chr4_+_62883796_62883854	0.31627026278385634	Sox2	ENSMUST00000030043.13|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000107415.8|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618	ENSMUST00000064814.6|Zfp618|ENSMUSG00000028358.16|zinc finger protein 618
mm39_v1_chr6_-_119940694_119940797	0.3160967326359139	Sox2	ENSMUST00000161512.3|Wnk1|ENSMUSG00000045962.17|WNK lysine deficient protein kinase 1
mm39_v1_chr7_-_122969064_122969144	0.3156140195612335	Sox2	ENSMUST00000207010.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000167309.8|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000205262.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000106442.9|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000098060.5|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17
mm39_v1_chr7_-_12829100_12829100	0.315516414494998	Sox2	ENSMUST00000209822.3|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85	ENSMUST00000235753.2|Vmn1r85|ENSMUSG00000070817.4|vomeronasal 1 receptor 85
mm39_v1_chr8_-_106016097_106016173	0.31465585590871453	Sox2	ENSMUST00000171788.8|4931428F04Rik|ENSMUSG00000014837.16|RIKEN cDNA 4931428F04 gene
mm39_v1_chr17_+_8591228_8591228	0.31427112846903665	Sox2	ENSMUST00000163578.8|T2|ENSMUSG00000058159.15|brachyury 2
mm39_v1_chr18_+_20691095_20691258	0.3132798430186797	Sox2	ENSMUST00000059787.15|Dsg2|ENSMUSG00000044393.16|desmoglein 2	ENSMUST00000120102.8|Dsg2|ENSMUSG00000044393.16|desmoglein 2
mm39_v1_chr11_-_5049223_5049266	0.31298891337973683	Sox2	ENSMUST00000079949.13|Ewsr1|ENSMUSG00000009079.17|Ewing sarcoma breakpoint region 1
mm39_v1_chr18_-_46444941_46444995	0.3127709507991173	Sox2	ENSMUST00000072835.7|Ccdc112|ENSMUSG00000071855.6|coiled-coil domain containing 112
mm39_v1_chr5_-_91550853_91550882	0.31209796212308843	Sox2	ENSMUST00000121044.6|Btc|ENSMUSG00000082361.7|betacellulin, epidermal growth factor family member
mm39_v1_chr1_-_92107971_92108063	0.31204682881239193	Sox2	ENSMUST00000186002.3|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4	ENSMUST00000097644.9|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4
mm39_v1_chr2_-_156154667_156154667	0.31093368075933575	Sox2	ENSMUST00000079125.8|Scand1|ENSMUSG00000046229.11|SCAN domain-containing 1
mm39_v1_chr6_-_137626207_137626298	0.3101831641510106	Sox2	ENSMUST00000134630.6|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000058210.13|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8	ENSMUST00000111878.8|Eps8|ENSMUSG00000015766.15|epidermal growth factor receptor pathway substrate 8
mm39_v1_chr2_+_90575714_90575813	0.30995070856739465	Sox2	ENSMUST00000238890.2|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4	ENSMUST00000013759.6|Fnbp4|ENSMUSG00000008200.16|formin binding protein 4
mm39_v1_chr11_-_90528888_90528926	0.30947056912326526	Sox2	ENSMUST00000020858.14|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000107875.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000107872.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4	ENSMUST00000143203.8|Stxbp4|ENSMUSG00000020546.15|syntaxin binding protein 4
mm39_v1_chr4_+_137944546_137944621	0.3091532624847087	Sox2	ENSMUST00000130071.2|Hp1bp3|ENSMUSG00000028759.14|heterochromatin protein 1, binding protein 3
mm39_v1_chr11_-_106469938_106469955	0.30874880010070754	Sox2	ENSMUST00000103070.3|Tex2|ENSMUSG00000040548.17|testis expressed gene 2
mm39_v1_chr6_+_17491231_17491242	0.3054104968342058	Sox2	ENSMUST00000080469.12|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr9_+_38202403_38202422	0.3048291712343365	Sox2	ENSMUST00000216276.2|Olfr896-ps1|ENSMUSG00000111814.2|olfactory receptor 896, pseudogene 1	ENSMUST00000215219.2|Olfr896-ps1|ENSMUSG00000111814.2|olfactory receptor 896, pseudogene 1
mm39_v1_chr11_+_67345895_67345982	0.3045544464573796	Sox2	ENSMUST00000108681.9|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr16_-_20245071_20245136	0.30317807924110785	Sox2	ENSMUST00000115547.9|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	ENSMUST00000096199.5|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr16_-_90081188_90081236	0.3012738906047613	Sox2	ENSMUST00000163419.9|Scaf4|ENSMUSG00000022983.17|SR-related CTD-associated factor 4
mm39_v1_chr2_-_32631028_32631028	0.29937890734659683	Sox2	ENSMUST00000009695.3|6330409D20Rik|ENSMUSG00000009551.3|RIKEN cDNA 6330409D20 gene
mm39_v1_chr4_-_33248499_33248519	0.2983705181008303	Sox2	ENSMUST00000049357.10|Pnrc1|ENSMUSG00000040128.10|proline-rich nuclear receptor coactivator 1
mm39_v1_chr2_-_26184450_26184526	0.2969979617716564	Sox2	ENSMUST00000217256.2|Ccdc187|ENSMUSG00000048038.9|coiled-coil domain containing 187	ENSMUST00000227200.2|Ccdc187|ENSMUSG00000048038.9|coiled-coil domain containing 187
mm39_v1_chr7_+_104263162_104263162	0.29679697609134026	Sox2	ENSMUST00000215575.3|Olfr656|ENSMUSG00000073924.6|olfactory receptor 656
mm39_v1_chr2_-_30305779_30305825	0.2961200591945382	Sox2	ENSMUST00000102855.8|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase	ENSMUST00000028207.13|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase
mm39_v1_chr8_-_41087793_41087849	0.29609750410661323	Sox2	ENSMUST00000173957.2|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7	ENSMUST00000048898.17|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7	ENSMUST00000174205.8|Mtmr7|ENSMUSG00000039431.17|myotubularin related protein 7
mm39_v1_chr8_-_3517617_3517680	0.2954913749780049	Sox2	ENSMUST00000111081.10|Pex11g|ENSMUSG00000069633.13|peroxisomal biogenesis factor 11 gamma	ENSMUST00000004686.13|Pex11g|ENSMUSG00000069633.13|peroxisomal biogenesis factor 11 gamma
mm39_v1_chr5_+_143803540_143803598	0.2950454349430595	Sox2	ENSMUST00000100487.6|Eif2ak1|ENSMUSG00000029613.16|eukaryotic translation initiation factor 2 alpha kinase 1
mm39_v1_chr12_+_111679689_111679737	0.29500923512369037	Sox2	ENSMUST00000040519.12|Coa8|ENSMUSG00000037787.15|cytochrome c oxidase assembly factor 8	ENSMUST00000163220.10|Coa8|ENSMUSG00000037787.15|cytochrome c oxidase assembly factor 8	ENSMUST00000162316.2|Coa8|ENSMUSG00000037787.15|cytochrome c oxidase assembly factor 8
mm39_v1_chr17_-_37938000_37938090	0.29488883575546715	Sox2	ENSMUST00000223366.2|Olfr115|ENSMUSG00000092413.7|olfactory receptor 115	ENSMUST00000216128.2|Olfr116|ENSMUSG00000061336.4|olfactory receptor 116
mm39_v1_chr9_+_123596276_123596306	0.29487726162326894	Sox2	ENSMUST00000166236.9|Ccr9|ENSMUSG00000029530.17|chemokine (C-C motif) receptor 9	ENSMUST00000111454.4|Ccr9|ENSMUSG00000029530.17|chemokine (C-C motif) receptor 9	ENSMUST00000168910.2|Ccr9|ENSMUSG00000029530.17|chemokine (C-C motif) receptor 9
mm39_v1_chr17_-_56019571_56019631	0.2935198640096688	Sox2	ENSMUST00000086876.7|Pot1b|ENSMUSG00000024174.10|protection of telomeres 1B	ENSMUST00000233557.2|Pot1b|ENSMUSG00000024174.10|protection of telomeres 1B	ENSMUST00000233972.2|Pot1b|ENSMUSG00000024174.10|protection of telomeres 1B
mm39_v1_chr17_+_36176485_36176735	0.2930573534023392	Sox2	ENSMUST00000127442.8|Ppp1r18|ENSMUSG00000034595.18|protein phosphatase 1, regulatory subunit 18	ENSMUST00000144382.8|Ppp1r18|ENSMUSG00000034595.18|protein phosphatase 1, regulatory subunit 18
mm39_v1_chr1_+_175459735_175459752	0.2928014977339482	Sox2	ENSMUST00000097458.4|Kmo|ENSMUSG00000039783.16|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm39_v1_chr16_-_89940652_89940662	0.291953126151114	Sox2	ENSMUST00000114124.9|Tiam1|ENSMUSG00000002489.17|T cell lymphoma invasion and metastasis 1
mm39_v1_chr9_+_86349226_86349273	0.291696440419776	Sox2	ENSMUST00000188675.7|Dop1a|ENSMUSG00000034973.17|DOP1 leucine zipper like protein A
mm39_v1_chr9_-_110474398_110474436	0.291582655954249	Sox2	ENSMUST00000149089.2|Nbeal2|ENSMUSG00000056724.16|neurobeachin-like 2
mm39_v1_chr2_-_130681603_130681616	0.29155325488022305	Sox2	ENSMUST00000119422.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr12_-_114547622_114547683	0.2909644442564386	Sox2	ENSMUST00000193893.6|Ighv1-9|ENSMUSG00000094694.7|immunoglobulin heavy variable V1-9	ENSMUST00000103498.3|Ighv1-9|ENSMUSG00000094694.7|immunoglobulin heavy variable V1-9
mm39_v1_chr7_+_126359869_126359924	0.29010673779605145	Sox2	ENSMUST00000206272.2|Mapk3|ENSMUSG00000063065.14|mitogen-activated protein kinase 3
mm39_v1_chr17_+_21952683_21952705	0.2897756539161369	Sox2	ENSMUST00000065871.14|Zfp229|ENSMUSG00000061544.14|zinc finger protein 229	ENSMUST00000183192.8|Zfp229|ENSMUSG00000061544.14|zinc finger protein 229
mm39_v1_chr5_+_34706936_34707032	0.2888270604510596	Sox2	ENSMUST00000179943.3|Sh3bp2|ENSMUSG00000054520.16|SH3-domain binding protein 2
mm39_v1_chrX_+_135723420_135723518	0.2883713135969115	Sox2	ENSMUST00000033800.13|Plp1|ENSMUSG00000031425.16|proteolipid protein (myelin) 1
mm39_v1_chr9_-_70410611_70410660	0.2854136148235515	Sox2	ENSMUST00000215848.2|Rnf111|ENSMUSG00000032217.14|ring finger 111	ENSMUST00000113595.2|Rnf111|ENSMUSG00000032217.14|ring finger 111	ENSMUST00000213647.2|Rnf111|ENSMUSG00000032217.14|ring finger 111
mm39_v1_chr15_+_85942928_85942981	0.2843005353284921	Sox2	ENSMUST00000138134.8|Gramd4|ENSMUSG00000035900.19|GRAM domain containing 4
mm39_v1_chr5_+_88731386_88731449	0.28415563833363305	Sox2	ENSMUST00000031229.11|Rufy3|ENSMUSG00000029291.12|RUN and FYVE domain containing 3
mm39_v1_chr4_+_152160713_152160840	0.2828691398515472	Sox2	ENSMUST00000239025.2|Plekhg5|ENSMUSG00000039713.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm39_v1_chr2_+_32041083_32041274	0.2816326682502233	Sox2	ENSMUST00000036691.14|Prrc2b|ENSMUSG00000039262.17|proline-rich coiled-coil 2B	ENSMUST00000069817.15|Prrc2b|ENSMUSG00000039262.17|proline-rich coiled-coil 2B
mm39_v1_chr13_-_61084358_61084439	0.27915136445590316	Sox2	ENSMUST00000225859.2|Gm49391|ENSMUSG00000114432.2|predicted gene, 49391	ENSMUST00000225167.2|Gm49391|ENSMUSG00000114432.2|predicted gene, 49391	ENSMUST00000021880.10|Ctla2a|ENSMUSG00000044258.11|cytotoxic T lymphocyte-associated protein 2 alpha
mm39_v1_chr12_+_73333553_73333578	0.2791242584137882	Sox2	ENSMUST00000140523.8|Slc38a6|ENSMUSG00000044712.16|solute carrier family 38, member 6	ENSMUST00000126488.8|Slc38a6|ENSMUSG00000044712.16|solute carrier family 38, member 6
mm39_v1_chr2_-_45000389_45000766	0.27895287036237715	Sox2	ENSMUST00000201804.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000028229.13|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000202187.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000153561.6|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000201490.2|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr7_-_73187369_73187513	0.2786902683347576	Sox2	ENSMUST00000172704.6|Chd2|ENSMUSG00000078671.12|chromodomain helicase DNA binding protein 2
mm39_v1_chr11_+_102919153_102919195	0.2778797206330077	Sox2	ENSMUST00000021314.8|Nmt1|ENSMUSG00000020936.9|N-myristoyltransferase 1
mm39_v1_chr16_-_59138611_59138611	0.2755466000837801	Sox2	ENSMUST00000216261.2|Olfr204|ENSMUSG00000095928.4|olfactory receptor 204
mm39_v1_chr1_+_92533504_92533545	0.27500355595669324	Sox2	ENSMUST00000217316.2|Olfr1410|ENSMUSG00000063583.7|olfactory receptor 1410	ENSMUST00000216553.2|Olfr1410|ENSMUSG00000063583.7|olfactory receptor 1410
mm39_v1_chr6_+_47221293_47221371	0.2743995344783951	Sox2	ENSMUST00000199100.5|Cntnap2|ENSMUSG00000039419.18|contactin associated protein-like 2
mm39_v1_chr5_-_147337162_147337299	0.27413777783372645	Sox2	ENSMUST00000049324.13|Flt3|ENSMUSG00000042817.16|FMS-like tyrosine kinase 3
mm39_v1_chr2_-_87543523_87543523	0.27280417590626177	Sox2	ENSMUST00000214209.2|Olfr1137|ENSMUSG00000075150.3|olfactory receptor 1137
mm39_v1_chr9_+_21527462_21527473	0.27233607596217463	Sox2	ENSMUST00000034707.15|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	ENSMUST00000098948.10|Smarca4|ENSMUSG00000032187.17|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
mm39_v1_chr1_+_64729603_64729625	0.2721854240493731	Sox2	ENSMUST00000114077.8|Ccnyl1|ENSMUSG00000070871.11|cyclin Y-like 1
mm39_v1_chr4_-_19922599_19922614	0.27134459144840445	Sox2	ENSMUST00000029900.6|Atp6v0d2|ENSMUSG00000028238.7|ATPase, H+ transporting, lysosomal V0 subunit D2
mm39_v1_chrX_-_104972938_104972988	0.2697033242904255	Sox2	ENSMUST00000198448.5|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000199233.5|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000134507.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000154866.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000128968.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000134381.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000150914.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr6_+_83688213_83688270	0.26793142407251685	Sox2	ENSMUST00000037807.3|Vax2|ENSMUSG00000034777.3|ventral anterior homeobox 2
mm39_v1_chr1_-_153363354_153363411	0.26716210200193924	Sox2	ENSMUST00000186380.7|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9	ENSMUST00000188345.2|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9	ENSMUST00000042141.12|Dhx9|ENSMUSG00000042699.12|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm39_v1_chr5_+_111565129_111565308	0.26615026205575437	Sox2	ENSMUST00000094463.5|Mn1|ENSMUSG00000070576.5|meningioma 1
mm39_v1_chr17_-_57394718_57394782	0.2661380516413199	Sox2	ENSMUST00000071135.6|Tubb4a|ENSMUSG00000062591.6|tubulin, beta 4A class IVA
mm39_v1_chr17_+_36176948_36176977	0.26604478610937365	Sox2	ENSMUST00000122899.8|Ppp1r18|ENSMUSG00000034595.18|protein phosphatase 1, regulatory subunit 18
mm39_v1_chr10_-_39862622_39862643	0.2649562815212991	Sox2	ENSMUST00000170579.9|Mfsd4b5|ENSMUSG00000038528.16|major facilitator superfamily domain containing 4B5	ENSMUST00000045524.7|Mfsd4b5|ENSMUSG00000038528.16|major facilitator superfamily domain containing 4B5	ENSMUST00000073618.13|Mfsd4b5|ENSMUSG00000038528.16|major facilitator superfamily domain containing 4B5	ENSMUST00000164566.8|Mfsd4b5|ENSMUSG00000038528.16|major facilitator superfamily domain containing 4B5
mm39_v1_chr17_+_43327412_43327482	0.264007144893272	Sox2	ENSMUST00000024708.6|Tnfrsf21|ENSMUSG00000023915.6|tumor necrosis factor receptor superfamily, member 21
mm39_v1_chr2_+_37406630_37406647	0.2630530405009933	Sox2	ENSMUST00000065441.7|Gpr21|ENSMUSG00000053164.7|G protein-coupled receptor 21
mm39_v1_chr3_+_122523219_122523384	0.26259001820333056	Sox2	ENSMUST00000200389.2|Pde5a|ENSMUSG00000053965.11|phosphodiesterase 5A, cGMP-specific
mm39_v1_chr11_+_80274105_80274223	0.2621280512880491	Sox2	ENSMUST00000165565.8|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000188489.7|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000017567.14|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000108216.8|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207	ENSMUST00000053740.15|Zfp207|ENSMUSG00000017421.19|zinc finger protein 207
mm39_v1_chr11_+_67477347_67477366	0.2619135896362801	Sox2	ENSMUST00000108682.9|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr2_+_111984716_111984717	0.2618460877868749	Sox2	ENSMUST00000214063.2|Olfr1318|ENSMUSG00000049758.8|olfactory receptor 1318	ENSMUST00000217533.2|Olfr1318|ENSMUSG00000049758.8|olfactory receptor 1318
mm39_v1_chr3_+_130904000_130904120	0.26082157609155654	Sox2	ENSMUST00000029611.14|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1	ENSMUST00000106341.9|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1	ENSMUST00000066849.13|Lef1|ENSMUSG00000027985.15|lymphoid enhancer binding factor 1
mm39_v1_chr6_+_51409643_51409654	0.2601057346231442	Sox2	ENSMUST00000005103.12|Nfe2l3|ENSMUSG00000029832.17|nuclear factor, erythroid derived 2, like 3
mm39_v1_chr16_+_43067641_43067673	0.2600934248088875	Sox2	ENSMUST00000079441.13|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114691.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr10_-_69048928_69048959	0.25871572817785	Sox2	ENSMUST00000170048.2|A930033H14Rik|ENSMUSG00000090622.2|RIKEN cDNA A930033H14 gene
mm39_v1_chr3_-_84387700_84387764	0.2577499502023398	Sox2	ENSMUST00000194027.2|Fhdc1|ENSMUSG00000041842.16|FH2 domain containing 1	ENSMUST00000107689.7|Fhdc1|ENSMUSG00000041842.16|FH2 domain containing 1
mm39_v1_chr16_-_20245138_20245149	0.25758223230636496	Sox2	ENSMUST00000079158.13|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr1_-_58463200_58463234	0.25722630501030974	Sox2	ENSMUST00000034868.14|Clk1|ENSMUSG00000026034.18|CDC-like kinase 1
mm39_v1_chr2_+_156562956_156562982	0.2570937210156374	Sox2	ENSMUST00000109566.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4	ENSMUST00000146412.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4	ENSMUST00000177013.8|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4	ENSMUST00000171030.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4
mm39_v1_chr19_-_46315543_46315595	0.2570232323149891	Sox2	ENSMUST00000223917.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000224447.2|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000041391.5|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing	ENSMUST00000096029.12|Psd|ENSMUSG00000037126.17|pleckstrin and Sec7 domain containing
mm39_v1_chr4_+_112089442_112089471	0.25683731279613725	Sox2	ENSMUST00000038455.12|Skint3|ENSMUSG00000070868.12|selection and upkeep of intraepithelial T cells 3	ENSMUST00000170945.2|Skint3|ENSMUSG00000070868.12|selection and upkeep of intraepithelial T cells 3
mm39_v1_chr6_-_39534765_39534801	0.25626415667693137	Sox2	ENSMUST00000036877.10|Dennd2a|ENSMUSG00000038456.10|DENN/MADD domain containing 2A	ENSMUST00000154149.2|Dennd2a|ENSMUSG00000038456.10|DENN/MADD domain containing 2A
mm39_v1_chr11_+_83855245_83855304	0.25567024128184207	Sox2	ENSMUST00000049714.15|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000092834.12|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000183714.8|Synrg|ENSMUSG00000034940.16|synergin, gamma	ENSMUST00000183456.8|Synrg|ENSMUSG00000034940.16|synergin, gamma
mm39_v1_chr18_-_47501513_47501559	0.25364289618476515	Sox2	ENSMUST00000076043.13|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000135790.8|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr2_+_158508609_158508660	0.25324971497573084	Sox2	ENSMUST00000103116.10|Ppp1r16b|ENSMUSG00000037754.14|protein phosphatase 1, regulatory subunit 16B
mm39_v1_chr1_+_180773462_180773527	0.252895859402698	Sox2	ENSMUST00000160508.2|Tmem63a|ENSMUSG00000026519.17|transmembrane protein 63a	ENSMUST00000160536.2|Tmem63a|ENSMUSG00000026519.17|transmembrane protein 63a
mm39_v1_chr17_-_29226965_29226976	0.25223697903867925	Sox2	ENSMUST00000009138.13|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38	ENSMUST00000119274.3|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr16_+_44913974_44913985	0.2517334458096481	Sox2	ENSMUST00000099498.10|Ccdc80|ENSMUSG00000022665.16|coiled-coil domain containing 80
mm39_v1_chr2_+_179666744_179666800	0.2513870984226913	Sox2	ENSMUST00000055485.12|Lsm14b|ENSMUSG00000039108.15|LSM family member 14B
mm39_v1_chr1_+_135074520_135074606	0.25050893701991217	Sox2	ENSMUST00000027684.11|Arl8a|ENSMUSG00000026426.11|ADP-ribosylation factor-like 8A
mm39_v1_chrX_+_152281200_152281223	0.24941413157066522	Sox2	ENSMUST00000060714.10|Ubqln2|ENSMUSG00000050148.10|ubiquilin 2
mm39_v1_chr8_-_70573465_70573523	0.24836829702597824	Sox2	ENSMUST00000002412.9|Ncan|ENSMUSG00000002341.9|neurocan
mm39_v1_chr6_-_71121347_71121423	0.2480849956043455	Sox2	ENSMUST00000160918.8|Thnsl2|ENSMUSG00000054474.16|threonine synthase-like 2 (bacterial)
mm39_v1_chr10_+_43355113_43355192	0.2480285295212887	Sox2	ENSMUST00000040147.8|Bend3|ENSMUSG00000038214.16|BEN domain containing 3
mm39_v1_chr3_-_57755500_57755519	0.2478803715038211	Sox2	ENSMUST00000066882.10|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr16_+_24212284_24212320	0.24776767504322336	Sox2	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr12_-_34956910_34957056	0.24703444766813987	Sox2	ENSMUST00000239321.2|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr11_+_83599841_83599926	0.24637475713459037	Sox2	ENSMUST00000001009.14|Wfdc18|ENSMUSG00000000983.14|WAP four-disulfide core domain 18
mm39_v1_chr12_+_3415143_3415207	0.24634948755996003	Sox2	ENSMUST00000020999.7|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr9_-_51076724_51076817	0.24620675421118138	Sox2	ENSMUST00000210433.2|Gm32742|ENSMUSG00000110266.2|predicted gene, 32742
mm39_v1_chr2_-_165210622_165210649	0.24449992770250706	Sox2	ENSMUST00000141140.2|Zfp663|ENSMUSG00000056824.16|zinc finger protein 663	ENSMUST00000103085.8|Zfp663|ENSMUSG00000056824.16|zinc finger protein 663
mm39_v1_chr2_+_179684288_179684355	0.2425496061878573	Sox2	ENSMUST00000041126.9|Ss18l1|ENSMUSG00000039086.10|SS18, nBAF chromatin remodeling complex subunit like 1
mm39_v1_chr15_-_78449172_78449230	0.2425115924271868	Sox2	ENSMUST00000230952.2|Rac2|ENSMUSG00000033220.8|Rac family small GTPase 2
mm39_v1_chr7_-_30577511_30577561	0.24195694187286504	Sox2	ENSMUST00000214289.2|Cd22|ENSMUSG00000030577.15|CD22 antigen
mm39_v1_chr4_-_20778847_20778878	0.2415649407080202	Sox2	ENSMUST00000102998.4|Nkain3|ENSMUSG00000055761.15|Na+/K+ transporting ATPase interacting 3
mm39_v1_chr2_-_45000250_45000309	0.24128614292508735	Sox2	ENSMUST00000201211.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000177302.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr19_+_10611574_10611609	0.2403423797162923	Sox2	ENSMUST00000055115.9|Vwce|ENSMUSG00000043789.9|von Willebrand factor C and EGF domains
mm39_v1_chr7_-_78228116_78228157	0.24002249896957806	Sox2	ENSMUST00000206268.2|Ntrk3|ENSMUSG00000059146.13|neurotrophic tyrosine kinase, receptor, type 3	ENSMUST00000039431.14|Ntrk3|ENSMUSG00000059146.13|neurotrophic tyrosine kinase, receptor, type 3
mm39_v1_chr17_+_47451868_47451868	0.23871883774289102	Sox2	ENSMUST00000190080.9|Trerf1|ENSMUSG00000064043.16|transcriptional regulating factor 1
mm39_v1_chr10_+_85763545_85763545	0.2379721017637846	Sox2	ENSMUST00000170396.3|Ascl4|ENSMUSG00000085111.4|achaete-scute family bHLH transcription factor 4
mm39_v1_chrX_-_139443926_139443944	0.23744769495504273	Sox2	ENSMUST00000055738.12|Tsc22d3|ENSMUSG00000031431.14|TSC22 domain family, member 3
mm39_v1_chr5_-_109372574_109372574	0.23735203397832083	Sox2	ENSMUST00000170341.3|Vmn2r14|ENSMUSG00000091059.3|vomeronasal 2, receptor 14
mm39_v1_chr7_-_26895141_26895192	0.23662424054872366	Sox2	ENSMUST00000163311.9|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A	ENSMUST00000126211.2|Snrpa|ENSMUSG00000061479.16|small nuclear ribonucleoprotein polypeptide A
mm39_v1_chr7_-_44854316_44854316	0.2364127542525596	Sox2	ENSMUST00000121017.5|Kash5|ENSMUSG00000038292.15|KASH domain containing 5
mm39_v1_chr4_+_116415251_116415287	0.23633615410484948	Sox2	ENSMUST00000106475.2|Gpbp1l1|ENSMUSG00000034042.17|GC-rich promoter binding protein 1-like 1
mm39_v1_chr10_-_30647836_30647847	0.23627515729898166	Sox2	ENSMUST00000215926.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7	ENSMUST00000213836.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr10_+_43455157_43455174	0.23612380415640408	Sox2	ENSMUST00000058714.10|Cd24a|ENSMUSG00000047139.10|CD24a antigen
mm39_v1_chr17_-_25492129_25492235	0.23602808755919363	Sox2	ENSMUST00000173231.2|Ube2i|ENSMUSG00000015120.16|ubiquitin-conjugating enzyme E2I
mm39_v1_chr7_+_44984681_44984721	0.2354265403315855	Sox2	ENSMUST00000085351.7|Hrc|ENSMUSG00000038239.12|histidine rich calcium binding protein
mm39_v1_chr11_+_115802828_115802850	0.23452077985130845	Sox2	ENSMUST00000132961.2|Smim6|ENSMUSG00000075420.7|small integral membrane protein 6
mm39_v1_chr11_+_11635908_11635949	0.2344822417817611	Sox2	ENSMUST00000065433.12|Ikzf1|ENSMUSG00000018654.18|IKAROS family zinc finger 1
mm39_v1_chr8_-_23143422_23143474	0.23438751516162704	Sox2	ENSMUST00000033938.7|Polb|ENSMUSG00000031536.7|polymerase (DNA directed), beta
mm39_v1_chr3_-_20329823_20329897	0.23329500996306063	Sox2	ENSMUST00000011607.6|Cpb1|ENSMUSG00000011463.6|carboxypeptidase B1 (tissue)
mm39_v1_chr10_+_80165961_80166045	0.23303246363901078	Sox2	ENSMUST00000186864.7|Reep6|ENSMUSG00000035504.17|receptor accessory protein 6	ENSMUST00000040081.7|Reep6|ENSMUSG00000035504.17|receptor accessory protein 6
mm39_v1_chr1_-_139304832_139304846	0.2324451704095715	Sox2	ENSMUST00000198445.5|Crb1|ENSMUSG00000063681.15|crumbs family member 1, photoreceptor morphogenesis associated
mm39_v1_chr9_-_57672375_57672432	0.23228726121389628	Sox2	ENSMUST00000215233.2|Clk3|ENSMUSG00000032316.9|CDC-like kinase 3
mm39_v1_chr11_+_94900677_94900716	0.23227329787170556	Sox2	ENSMUST00000055947.10|Samd14|ENSMUSG00000047181.13|sterile alpha motif domain containing 14
mm39_v1_chr10_-_3217767_3217774	0.2320975938224051	Sox2	ENSMUST00000170893.3|H60c|ENSMUSG00000091618.4|histocompatibility 60c
mm39_v1_chr15_+_76131020_76131031	0.23206818822447794	Sox2	ENSMUST00000229380.2|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
mm39_v1_chr10_+_80165787_80165821	0.2320479081230684	Sox2	ENSMUST00000105358.8|Reep6|ENSMUSG00000035504.17|receptor accessory protein 6	ENSMUST00000105357.2|Reep6|ENSMUSG00000035504.17|receptor accessory protein 6	ENSMUST00000105354.8|Reep6|ENSMUSG00000035504.17|receptor accessory protein 6	ENSMUST00000105355.8|Reep6|ENSMUSG00000035504.17|receptor accessory protein 6
mm39_v1_chr17_-_36220518_36220590	0.22994054312724843	Sox2	ENSMUST00000141132.2|Atat1|ENSMUSG00000024426.18|alpha tubulin acetyltransferase 1
mm39_v1_chr9_-_49479791_49479849	0.22968423626422813	Sox2	ENSMUST00000194252.6|Ncam1|ENSMUSG00000039542.17|neural cell adhesion molecule 1
mm39_v1_chr18_+_35252470_35252495	0.2296070815346156	Sox2	ENSMUST00000237154.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1
mm39_v1_chr11_-_104332528_104332621	0.22934688316853588	Sox2	ENSMUST00000106971.2|Kansl1|ENSMUSG00000018412.17|KAT8 regulatory NSL complex subunit 1
mm39_v1_chr4_-_131776368_131776468	0.22809213231759892	Sox2	ENSMUST00000105981.9|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1	ENSMUST00000084253.10|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1	ENSMUST00000141291.3|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr15_-_44291226_44291317	0.2279374493505956	Sox2	ENSMUST00000227843.2|Nudcd1|ENSMUSG00000038736.11|NudC domain containing 1
mm39_v1_chr17_-_80597495_80597614	0.2271122561478273	Sox2	ENSMUST00000086555.11|Dhx57|ENSMUSG00000035051.16|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm39_v1_chr9_-_107749594_107749627	0.22702827872976994	Sox2	ENSMUST00000183035.2|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6
mm39_v1_chr13_-_13568106_13568209	0.22671100864228994	Sox2	ENSMUST00000021738.10|Gpr137b|ENSMUSG00000021306.12|G protein-coupled receptor 137B	ENSMUST00000220628.2|Gpr137b|ENSMUSG00000021306.12|G protein-coupled receptor 137B
mm39_v1_chr1_-_79739469_79739491	0.22555030981422117	Sox2	ENSMUST00000113512.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113513.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113515.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113514.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113510.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113511.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000048820.14|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1
mm39_v1_chr4_+_155685830_155685902	0.22491425869327578	Sox2	ENSMUST00000105608.9|Slc35e2|ENSMUSG00000042202.16|solute carrier family 35, member E2
mm39_v1_chr10_+_4216353_4216380	0.22472582702424518	Sox2	ENSMUST00000045730.7|Akap12|ENSMUSG00000038587.11|A kinase (PRKA) anchor protein (gravin) 12
mm39_v1_chr10_+_128295107_128295118	0.22381695683923972	Sox2	ENSMUST00000218228.2|Smarcc2|ENSMUSG00000025369.16|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm39_v1_chr19_-_40502117_40502238	0.22317072098009794	Sox2	ENSMUST00000225148.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000224667.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000225153.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000238831.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000226047.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1	ENSMUST00000224247.2|Sorbs1|ENSMUSG00000025006.19|sorbin and SH3 domain containing 1
mm39_v1_chr10_+_34265969_34265985	0.22249752460805364	Sox2	ENSMUST00000105511.2|Col10a1|ENSMUSG00000039462.5|collagen, type X, alpha 1
mm39_v1_chr14_-_36628263_36628280	0.2224210580144157	Sox2	ENSMUST00000183007.2|Ccser2|ENSMUSG00000058690.15|coiled-coil serine rich 2
mm39_v1_chr13_+_42205790_42205880	0.2222945674935948	Sox2	ENSMUST00000220525.2|Hivep1|ENSMUSG00000021366.9|human immunodeficiency virus type I enhancer binding protein 1
mm39_v1_chr3_-_108117754_108117818	0.22197961426413923	Sox2	ENSMUST00000117784.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2	ENSMUST00000119650.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2	ENSMUST00000117409.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2
mm39_v1_chr13_-_22961570_22961570	0.22180763323207497	Sox2	ENSMUST00000227136.2|Vmn1r208|ENSMUSG00000071493.6|vomeronasal 1 receptor 208
mm39_v1_chr7_-_28071658_28071796	0.22099302570895715	Sox2	ENSMUST00000094644.11|Plekhg2|ENSMUSG00000037552.18|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm39_v1_chr19_+_42040681_42040697	0.22092359524199834	Sox2	ENSMUST00000164518.4|4933411K16Rik|ENSMUSG00000090369.4|RIKEN cDNA 4933411K16 gene
mm39_v1_chr7_+_86233070_86233070	0.22059672862356872	Sox2	ENSMUST00000215365.2|Olfr295|ENSMUSG00000059319.4|olfactory receptor 295
mm39_v1_chr1_+_42734051_42734105	0.22056593403350655	Sox2	ENSMUST00000239323.2|Pou3f3|ENSMUSG00000045515.5|POU domain, class 3, transcription factor 3	ENSMUST00000199521.5|Gm20646|ENSMUSG00000093436.7|predicted gene 20646	ENSMUST00000176807.3|Gm20646|ENSMUSG00000093436.7|predicted gene 20646
mm39_v1_chr2_+_128809268_128809363	0.21999205375266584	Sox2	ENSMUST00000110320.9|Zc3h6|ENSMUSG00000042851.18|zinc finger CCCH type containing 6	ENSMUST00000110319.3|Zc3h6|ENSMUSG00000042851.18|zinc finger CCCH type containing 6
mm39_v1_chr7_+_127069526_127069544	0.2195621602877427	Sox2	ENSMUST00000106292.8|Prr14|ENSMUSG00000030822.16|proline rich 14
mm39_v1_chr8_+_91681550_91681688	0.21954169345557456	Sox2	ENSMUST00000210947.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr3_-_63836796_63836893	0.21942076386223436	Sox2	ENSMUST00000061706.7|E130311K13Rik|ENSMUSG00000048581.13|RIKEN cDNA E130311K13 gene
mm39_v1_chr11_-_77498636_77498686	0.21934013053369944	Sox2	ENSMUST00000058496.8|Taok1|ENSMUSG00000017291.14|TAO kinase 1
mm39_v1_chr19_+_10666085_10666184	0.21818968441461603	Sox2	ENSMUST00000237240.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235927.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000087951.7|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000237437.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C	ENSMUST00000235921.2|Vps37c|ENSMUSG00000048832.10|vacuolar protein sorting 37C
mm39_v1_chr3_-_9898713_9898739	0.21795701710687915	Sox2	ENSMUST00000161949.8|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr7_-_12743720_12743783	0.21761085445253986	Sox2	ENSMUST00000210282.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000172240.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000051390.9|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45	ENSMUST00000209997.2|Zbtb45|ENSMUSG00000049600.9|zinc finger and BTB domain containing 45
mm39_v1_chr7_-_18165959_18165972	0.216950003838739	Sox2	ENSMUST00000019291.7|Psg28|ENSMUSG00000030373.7|pregnancy-specific glycoprotein 28
mm39_v1_chr18_+_82572595_82572705	0.21657301486402922	Sox2	ENSMUST00000152071.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000142850.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000080658.12|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000133193.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000123251.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000153478.9|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000075372.13|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000102812.12|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000062446.15|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000114674.11|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000132369.3|Mbp|ENSMUSG00000041607.18|myelin basic protein
mm39_v1_chr7_-_24705320_24705383	0.21631509922227346	Sox2	ENSMUST00000102858.10|Atp1a3|ENSMUSG00000040907.16|ATPase, Na+/K+ transporting, alpha 3 polypeptide	ENSMUST00000196684.2|Atp1a3|ENSMUSG00000040907.16|ATPase, Na+/K+ transporting, alpha 3 polypeptide	ENSMUST00000080882.11|Atp1a3|ENSMUSG00000040907.16|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm39_v1_chr9_-_102231884_102231898	0.2146723615628098	Sox2	ENSMUST00000035129.14|Ephb1|ENSMUSG00000032537.16|Eph receptor B1	ENSMUST00000085169.12|Ephb1|ENSMUSG00000032537.16|Eph receptor B1	ENSMUST00000149800.3|Ephb1|ENSMUSG00000032537.16|Eph receptor B1
mm39_v1_chr4_+_59626185_59626262	0.21395971050358564	Sox2	ENSMUST00000070150.11|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene	ENSMUST00000052420.7|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene
mm39_v1_chr14_+_30741115_30741135	0.2128357853243967	Sox2	ENSMUST00000112094.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000144009.2|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chr11_-_68848271_68848311	0.2112424224888657	Sox2	ENSMUST00000108671.2|Arhgef15|ENSMUSG00000052921.14|Rho guanine nucleotide exchange factor (GEF) 15
mm39_v1_chr1_+_88998115_88998147	0.2105166812956587	Sox2	ENSMUST00000066279.11|Sh3bp4|ENSMUSG00000036206.13|SH3-domain binding protein 4
mm39_v1_chr2_-_181101158_181101232	0.21041395645620456	Sox2	ENSMUST00000155535.2|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000029106.13|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46	ENSMUST00000087409.10|Zbtb46|ENSMUSG00000027583.14|zinc finger and BTB domain containing 46
mm39_v1_chr8_+_11778039_11778105	0.21027700800059143	Sox2	ENSMUST00000110909.9|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)
mm39_v1_chr1_-_21149392_21149467	0.20970998704558858	Sox2	ENSMUST00000037998.6|Tram2|ENSMUSG00000041779.6|translocating chain-associating membrane protein 2
mm39_v1_chr14_-_55329734_55329781	0.2087629953049551	Sox2	ENSMUST00000036328.9|Zfhx2|ENSMUSG00000040721.10|zinc finger homeobox 2
mm39_v1_chr16_-_20244631_20244736	0.20828393256532735	Sox2	ENSMUST00000077867.10|Abcc5|ENSMUSG00000022822.17|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm39_v1_chr3_-_9898676_9898706	0.20630693900232533	Sox2	ENSMUST00000108384.9|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr12_-_115832846_115832874	0.20504272315772532	Sox2	ENSMUST00000199373.2|Ighv1-78|ENSMUSG00000096326.3|immunoglobulin heavy variable 1-78
mm39_v1_chr6_-_87312681_87312706	0.20488380626624503	Sox2	ENSMUST00000204805.3|Antxr1|ENSMUSG00000033420.13|anthrax toxin receptor 1
mm39_v1_chr2_-_146353819_146353910	0.203973422825831	Sox2	ENSMUST00000131824.8|Ralgapa2|ENSMUSG00000037110.21|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm39_v1_chr6_-_70412460_70412492	0.20358284311094116	Sox2	ENSMUST00000103394.2|Igkv6-14|ENSMUSG00000096844.2|immunoglobulin kappa variable 6-14
mm39_v1_chr5_-_137869969_137869999	0.20335468092130746	Sox2	ENSMUST00000196162.5|Pilrb2|ENSMUSG00000066682.12|paired immunoglobin-like type 2 receptor beta 2
mm39_v1_chr2_+_68691778_68691854	0.20276647496044542	Sox2	ENSMUST00000028426.9|Cers6|ENSMUSG00000027035.11|ceramide synthase 6
mm39_v1_chr12_-_81827893_81827949	0.20250501472111895	Sox2	ENSMUST00000035987.9|Map3k9|ENSMUSG00000042724.9|mitogen-activated protein kinase kinase kinase 9
mm39_v1_chr15_-_50746202_50746218	0.20198577808232543	Sox2	ENSMUST00000184885.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr2_+_29779227_29779255	0.20197456293286173	Sox2	ENSMUST00000123335.8|Odf2|ENSMUSG00000026790.20|outer dense fiber of sperm tails 2
mm39_v1_chrX_+_99773784_99773795	0.20168089168178838	Sox2	ENSMUST00000113744.2|Gdpd2|ENSMUSG00000019359.15|glycerophosphodiester phosphodiesterase domain containing 2
mm39_v1_chr7_-_100164007_100164167	0.20116460788237445	Sox2	ENSMUST00000207405.2|Dnajb13|ENSMUSG00000030708.15|DnaJ heat shock protein family (Hsp40) member B13
mm39_v1_chr2_+_156563284_156563412	0.20114340831281352	Sox2	ENSMUST00000099145.6|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4
mm39_v1_chr11_+_87959067_87959115	0.20048634805618767	Sox2	ENSMUST00000018521.11|Vezf1|ENSMUSG00000018377.11|vascular endothelial zinc finger 1
mm39_v1_chr16_+_19916292_19916346	0.20026245968193734	Sox2	ENSMUST00000023509.5|Klhl24|ENSMUSG00000062901.4|kelch-like 24	ENSMUST00000232088.2|Klhl24|ENSMUSG00000062901.4|kelch-like 24	ENSMUST00000231842.2|Klhl24|ENSMUSG00000062901.4|kelch-like 24
mm39_v1_chr14_-_100521888_100521934	0.20023566367760373	Sox2	ENSMUST00000226774.2|Klf12|ENSMUSG00000072294.6|Kruppel-like factor 12
mm39_v1_chr19_-_56810593_56810654	0.20004774238074055	Sox2	ENSMUST00000118592.8|Ccdc186|ENSMUSG00000035173.15|coiled-coil domain containing 186
mm39_v1_chr1_-_171115487_171115564	0.1995441756659561	Sox2	ENSMUST00000111305.8|Usp21|ENSMUSG00000053483.16|ubiquitin specific peptidase 21	ENSMUST00000065941.12|Usp21|ENSMUSG00000053483.16|ubiquitin specific peptidase 21
mm39_v1_chr11_+_104122216_104122279	0.1980576267760822	Sox2	ENSMUST00000106992.10|Mapt|ENSMUSG00000018411.18|microtubule-associated protein tau
mm39_v1_chr5_+_138083345_138083410	0.19742690165549948	Sox2	ENSMUST00000019660.11|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000066617.12|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1	ENSMUST00000110963.8|Zkscan1|ENSMUSG00000029729.13|zinc finger with KRAB and SCAN domains 1
mm39_v1_chr15_-_103160082_103160127	0.1973253916695634	Sox2	ENSMUST00000149111.8|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2	ENSMUST00000132836.8|Nfe2|ENSMUSG00000058794.13|nuclear factor, erythroid derived 2
mm39_v1_chr9_-_45817666_45817750	0.19649929128070687	Sox2	ENSMUST00000161187.8|Rnf214|ENSMUSG00000042790.17|ring finger protein 214
mm39_v1_chr19_-_3464447_3464544	0.19598525974497527	Sox2	ENSMUST00000025842.8|Gal|ENSMUSG00000024907.8|galanin and GMAP prepropeptide	ENSMUST00000237521.2|Gal|ENSMUSG00000024907.8|galanin and GMAP prepropeptide
mm39_v1_chr14_-_7766684_7766722	0.19579660163792875	Sox2	ENSMUST00000225630.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000225979.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000226079.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000223607.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000223761.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000223981.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000224222.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000225175.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000225238.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7	ENSMUST00000225232.3|Slc4a7|ENSMUSG00000021733.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm39_v1_chr9_-_44632680_44632781	0.19569957868813584	Sox2	ENSMUST00000148929.2|Phldb1|ENSMUSG00000048537.17|pleckstrin homology like domain, family B, member 1	ENSMUST00000123406.8|Phldb1|ENSMUSG00000048537.17|pleckstrin homology like domain, family B, member 1
mm39_v1_chr1_-_33853598_33853655	0.19358647475116864	Sox2	ENSMUST00000019861.13|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451	ENSMUST00000044455.8|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451
mm39_v1_chr3_-_38538980_38539016	0.1933654660055618	Sox2	ENSMUST00000120875.8|Ankrd50|ENSMUSG00000044864.17|ankyrin repeat domain 50
mm39_v1_chr11_+_101207021_101207123	0.1930863184227084	Sox2	ENSMUST00000142640.8|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)	ENSMUST00000019470.14|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chrX_+_99773523_99773567	0.19267330057642792	Sox2	ENSMUST00000019503.14|Gdpd2|ENSMUSG00000019359.15|glycerophosphodiester phosphodiesterase domain containing 2
mm39_v1_chr2_+_157401998_157402050	0.1925690792503389	Sox2	ENSMUST00000153739.9|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173595.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000109526.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173839.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173041.8|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000173793.8|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000172487.2|Nnat|ENSMUSG00000067786.17|neuronatin	ENSMUST00000088484.6|Nnat|ENSMUSG00000067786.17|neuronatin
mm39_v1_chr15_+_102234551_102234587	0.19232272657941862	Sox2	ENSMUST00000166658.8|Pfdn5|ENSMUSG00000001289.13|prefoldin 5	ENSMUST00000062492.11|Pfdn5|ENSMUSG00000001289.13|prefoldin 5
mm39_v1_chr3_+_153679073_153679162	0.192294290455831	Sox2	ENSMUST00000089948.6|Slc44a5|ENSMUSG00000028360.11|solute carrier family 44, member 5
mm39_v1_chr1_+_82817388_82817455	0.19212089527063037	Sox2	ENSMUST00000190052.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000063380.11|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000187899.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000186302.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000190046.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr17_+_48717007_48717134	0.19196236492130087	Sox2	ENSMUST00000167180.8|Oard1|ENSMUSG00000040771.15|O-acyl-ADP-ribose deacylase 1	ENSMUST00000046651.7|Oard1|ENSMUSG00000040771.15|O-acyl-ADP-ribose deacylase 1	ENSMUST00000233426.2|Oard1|ENSMUSG00000040771.15|O-acyl-ADP-ribose deacylase 1
mm39_v1_chrX_+_59044796_59044855	0.19185804386356964	Sox2	ENSMUST00000033477.5|F9|ENSMUSG00000031138.5|coagulation factor IX
mm39_v1_chr11_+_5738480_5738560	0.19088876045182215	Sox2	ENSMUST00000109845.8|Dbnl|ENSMUSG00000020476.15|drebrin-like	ENSMUST00000020769.14|Dbnl|ENSMUSG00000020476.15|drebrin-like	ENSMUST00000102928.5|Dbnl|ENSMUSG00000020476.15|drebrin-like
mm39_v1_chr8_-_106015682_106015725	0.18946042381381484	Sox2	ENSMUST00000212922.2|4931428F04Rik|ENSMUSG00000014837.16|RIKEN cDNA 4931428F04 gene	ENSMUST00000212219.2|4931428F04Rik|ENSMUSG00000014837.16|RIKEN cDNA 4931428F04 gene
mm39_v1_chr13_-_49301407_49301514	0.18927294132638442	Sox2	ENSMUST00000162581.8|Wnk2|ENSMUSG00000037989.16|WNK lysine deficient protein kinase 2	ENSMUST00000110097.9|Wnk2|ENSMUSG00000037989.16|WNK lysine deficient protein kinase 2	ENSMUST00000049265.15|Wnk2|ENSMUSG00000037989.16|WNK lysine deficient protein kinase 2	ENSMUST00000035538.13|Wnk2|ENSMUSG00000037989.16|WNK lysine deficient protein kinase 2	ENSMUST00000110096.8|Wnk2|ENSMUSG00000037989.16|WNK lysine deficient protein kinase 2	ENSMUST00000091623.10|Wnk2|ENSMUSG00000037989.16|WNK lysine deficient protein kinase 2
mm39_v1_chr6_+_54017063_54017077	0.18877060305578827	Sox2	ENSMUST00000127323.3|Chn2|ENSMUSG00000004633.18|chimerin 2
mm39_v1_chr7_-_127474806_127474851	0.1876310656953045	Sox2	ENSMUST00000106261.8|Zfp668|ENSMUSG00000049728.15|zinc finger protein 668	ENSMUST00000144721.2|Zfp668|ENSMUSG00000049728.15|zinc finger protein 668
mm39_v1_chrX_-_58613428_58613454	0.18735243332097515	Sox2	ENSMUST00000119833.8|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13	ENSMUST00000131319.8|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr2_-_165726610_165726794	0.18564330664872145	Sox2	ENSMUST00000177633.8|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8	ENSMUST00000018050.14|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8	ENSMUST00000088113.11|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8
mm39_v1_chr5_+_34706911_34706925	0.18552856369750614	Sox2	ENSMUST00000118545.8|Sh3bp2|ENSMUSG00000054520.16|SH3-domain binding protein 2
mm39_v1_chr2_+_3714515_3714537	0.1851523941659881	Sox2	ENSMUST00000115053.9|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr2_+_90770742_90770888	0.18482078471717778	Sox2	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr2_-_148717496_148717536	0.18313976569697848	Sox2	ENSMUST00000028938.7|Cst3|ENSMUSG00000027447.7|cystatin C
mm39_v1_chr2_+_3714492_3714507	0.18264391308570177	Sox2	ENSMUST00000027965.11|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr3_+_102965601_102965684	0.182592158830762	Sox2	ENSMUST00000029445.13|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene	ENSMUST00000200069.5|Nras|ENSMUSG00000027852.15|neuroblastoma ras oncogene
mm39_v1_chr2_+_146697746_146697845	0.18185053949707494	Sox2	ENSMUST00000099278.9|Kiz|ENSMUSG00000074749.11|kizuna centrosomal protein	ENSMUST00000156232.2|Kiz|ENSMUSG00000074749.11|kizuna centrosomal protein
mm39_v1_chr15_-_84441977_84442075	0.1817989186072042	Sox2	ENSMUST00000069476.5|Rtl6|ENSMUSG00000055745.5|retrotransposon Gag like 6
mm39_v1_chr1_-_65142521_65142540	0.18077715552002882	Sox2	ENSMUST00000061497.9|Cryga|ENSMUSG00000044429.9|crystallin, gamma A
mm39_v1_chr4_-_149391963_149392161	0.18071561970592676	Sox2	ENSMUST00000055647.15|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B	ENSMUST00000030806.6|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B	ENSMUST00000238956.2|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B	ENSMUST00000060537.13|Kif1b|ENSMUSG00000063077.16|kinesin family member 1B
mm39_v1_chr1_-_54965470_54965561	0.1804225792871533	Sox2	ENSMUST00000179030.8|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44	ENSMUST00000044359.16|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44
mm39_v1_chr5_+_108609087_108609107	0.18010010872972695	Sox2	ENSMUST00000112597.8|Pcgf3|ENSMUSG00000033623.14|polycomb group ring finger 3	ENSMUST00000046975.12|Pcgf3|ENSMUSG00000033623.14|polycomb group ring finger 3
mm39_v1_chr2_-_153083322_153083346	0.18005447466257768	Sox2	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chrX_-_37665041_37665081	0.17799386553576063	Sox2	ENSMUST00000050083.6|Cul4b|ENSMUSG00000031095.16|cullin 4B	ENSMUST00000115118.8|Cul4b|ENSMUSG00000031095.16|cullin 4B
mm39_v1_chr11_+_121128042_121128116	0.17778420116337498	Sox2	ENSMUST00000103015.4|Narf|ENSMUSG00000000056.8|nuclear prelamin A recognition factor
mm39_v1_chr7_+_24596806_24596941	0.17738976076632423	Sox2	ENSMUST00000003469.8|Cd79a|ENSMUSG00000003379.8|CD79A antigen (immunoglobulin-associated alpha)
mm39_v1_chr11_-_8614497_8614594	0.17728030068899453	Sox2	ENSMUST00000020695.13|Tns3|ENSMUSG00000020422.15|tensin 3
mm39_v1_chr5_-_140634773_140634807	0.1769588105696463	Sox2	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr15_-_89064936_89064991	0.1768497320152869	Sox2	ENSMUST00000109331.9|Plxnb2|ENSMUSG00000036606.18|plexin B2
mm39_v1_chr13_-_86194889_86195023	0.1767700273382306	Sox2	ENSMUST00000131011.2|Cox7c|ENSMUSG00000017778.15|cytochrome c oxidase subunit 7C
mm39_v1_chr7_+_99030621_99030781	0.17626874345297674	Sox2	ENSMUST00000037528.10|Gdpd5|ENSMUSG00000035314.11|glycerophosphodiester phosphodiesterase domain containing 5
mm39_v1_chr5_-_123859070_123859125	0.17554385406912446	Sox2	ENSMUST00000031376.12|Zcchc8|ENSMUSG00000029427.12|zinc finger, CCHC domain containing 8
mm39_v1_chr17_-_29226700_29226804	0.17510297119731655	Sox2	ENSMUST00000233441.2|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr14_+_26760898_26760951	0.17462991607708797	Sox2	ENSMUST00000035336.5|Il17rd|ENSMUSG00000040717.7|interleukin 17 receptor D
mm39_v1_chr4_-_118774662_118774662	0.1739716369742326	Sox2	ENSMUST00000071979.2|Olfr1329|ENSMUSG00000096705.2|olfactory receptor 1329
mm39_v1_chr2_-_37333109_37333210	0.17266954438540377	Sox2	ENSMUST00000102789.3|Zbtb26|ENSMUSG00000050714.10|zinc finger and BTB domain containing 26	ENSMUST00000067043.5|Zbtb26|ENSMUSG00000050714.10|zinc finger and BTB domain containing 26	ENSMUST00000112932.2|Zbtb6|ENSMUSG00000066798.4|zinc finger and BTB domain containing 6
mm39_v1_chr13_-_34314328_34314344	0.17248936077712532	Sox2	ENSMUST00000075774.5|Tubb2b|ENSMUSG00000045136.7|tubulin, beta 2B class IIB
mm39_v1_chr1_-_10790120_10790170	0.17230849745039703	Sox2	ENSMUST00000035577.7|Cpa6|ENSMUSG00000042501.13|carboxypeptidase A6
mm39_v1_chr12_+_3415107_3415142	0.17205609105792768	Sox2	ENSMUST00000220210.2|Kif3c|ENSMUSG00000020668.11|kinesin family member 3C
mm39_v1_chr10_+_128825300_128825300	0.1704652981969132	Sox2	ENSMUST00000091996.4|Olfr9|ENSMUSG00000069430.4|olfactory receptor 9
mm39_v1_chr10_-_121146940_121147094	0.17017676143600968	Sox2	ENSMUST00000064107.7|Tbc1d30|ENSMUSG00000052302.7|TBC1 domain family, member 30
mm39_v1_chr18_+_65831324_65831355	0.16994674681061728	Sox2	ENSMUST00000115097.8|Oacyl|ENSMUSG00000046610.16|O-acyltransferase like	ENSMUST00000117694.2|Oacyl|ENSMUSG00000046610.16|O-acyltransferase like	ENSMUST00000235962.2|Oacyl|ENSMUSG00000046610.16|O-acyltransferase like
mm39_v1_chr17_-_43978056_43978105	0.16892887364576428	Sox2	ENSMUST00000024705.6|Slc25a27|ENSMUSG00000023912.11|solute carrier family 25, member 27
mm39_v1_chr10_+_76284907_76284943	0.16844572738933147	Sox2	ENSMUST00000092406.12|2610028H24Rik|ENSMUSG00000009114.18|RIKEN cDNA 2610028H24 gene
mm39_v1_chr4_-_44167904_44167975	0.16732833364062058	Sox2	ENSMUST00000102934.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr2_-_111104451_111104451	0.16725202697459354	Sox2	ENSMUST00000214760.2|Olfr1277|ENSMUSG00000074965.6|olfactory receptor 1277
mm39_v1_chr11_+_70323452_70323533	0.16723020408608635	Sox2	ENSMUST00000084954.13|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000108568.10|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000079056.9|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102564.11|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000124943.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000150076.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102563.2|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2
mm39_v1_chr6_+_42867662_42867662	0.16653918138850335	Sox2	ENSMUST00000213952.3|Olfr448|ENSMUSG00000043119.6|olfactory receptor 448
mm39_v1_chr6_-_88852017_88852036	0.1664492263220038	Sox2	ENSMUST00000145944.3|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2
mm39_v1_chr7_+_75292971_75293067	0.16609143296276155	Sox2	ENSMUST00000207998.2|Akap13|ENSMUSG00000066406.17|A kinase (PRKA) anchor protein 13
mm39_v1_chrX_+_9138995_9139093	0.16586412027030073	Sox2	ENSMUST00000015486.7|Xk|ENSMUSG00000015342.7|X-linked Kx blood group
mm39_v1_chr17_+_57665691_57665721	0.16446002048138222	Sox2	ENSMUST00000086763.13|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000233376.2|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000233840.2|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000232808.2|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1	ENSMUST00000004850.8|Adgre1|ENSMUSG00000004730.16|adhesion G protein-coupled receptor E1
mm39_v1_chr16_-_31133622_31133626	0.1644502397567188	Sox2	ENSMUST00000115230.2|Apod|ENSMUSG00000022548.15|apolipoprotein D	ENSMUST00000130560.8|Apod|ENSMUSG00000022548.15|apolipoprotein D
mm39_v1_chr7_+_30450896_30450987	0.16439066130498872	Sox2	ENSMUST00000182229.8|Sbsn|ENSMUSG00000046056.16|suprabasin	ENSMUST00000080518.14|Sbsn|ENSMUSG00000046056.16|suprabasin	ENSMUST00000182227.8|Sbsn|ENSMUSG00000046056.16|suprabasin	ENSMUST00000182721.8|Sbsn|ENSMUSG00000046056.16|suprabasin
mm39_v1_chr9_-_48747232_48747262	0.1642434696517821	Sox2	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr11_+_61967821_61967927	0.1642131257989951	Sox2	ENSMUST00000092415.9|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000201015.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000202744.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000201723.4|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1	ENSMUST00000202179.2|Specc1|ENSMUSG00000042331.14|sperm antigen with calponin homology and coiled-coil domains 1
mm39_v1_chr8_-_34237752_34237809	0.1634598988806711	Sox2	ENSMUST00000179364.3|Smim18|ENSMUSG00000094500.3|small integral membrane protein 18
mm39_v1_chr10_+_121477699_121477777	0.16340668877083522	Sox2	ENSMUST00000120642.9|D930020B18Rik|ENSMUSG00000047642.16|RIKEN cDNA D930020B18 gene	ENSMUST00000132744.2|D930020B18Rik|ENSMUSG00000047642.16|RIKEN cDNA D930020B18 gene
mm39_v1_chr7_+_16044336_16044380	0.1632918769562385	Sox2	ENSMUST00000136781.2|Bbc3|ENSMUSG00000002083.14|BCL2 binding component 3
mm39_v1_chr7_+_101619327_101619393	0.16277227318149298	Sox2	ENSMUST00000210475.2|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chr9_-_48747474_48747563	0.16253332698931092	Sox2	ENSMUST00000216150.2|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr5_+_34140877_34140892	0.16232602130861348	Sox2	ENSMUST00000114382.2|Gm1673|ENSMUSG00000070858.13|predicted gene 1673
mm39_v1_chr9_+_44394080_44394122	0.1621376345685047	Sox2	ENSMUST00000220303.2|Bcl9l|ENSMUSG00000063382.7|B cell CLL/lymphoma 9-like
mm39_v1_chr3_+_60408600_60408663	0.1616635951666818	Sox2	ENSMUST00000099087.8|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr9_-_116004265_116004333	0.16088890412528156	Sox2	ENSMUST00000061101.12|Tgfbr2|ENSMUSG00000032440.14|transforming growth factor, beta receptor II
mm39_v1_chr15_+_73384407_73384457	0.16067287167668937	Sox2	ENSMUST00000043414.12|Dennd3|ENSMUSG00000036661.15|DENN/MADD domain containing 3
mm39_v1_chrX_+_158242121_158242189	0.1601078216114953	Sox2	ENSMUST00000112470.3|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2	ENSMUST00000043151.12|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2	ENSMUST00000156172.3|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2
mm39_v1_chr1_-_153775944_153775957	0.15936892210413028	Sox2	ENSMUST00000123490.2|Teddm2|ENSMUSG00000045968.8|transmembrane epididymal family member 2
mm39_v1_chr8_+_107141948_107142028	0.15761707691787705	Sox2	ENSMUST00000034382.8|Zfp90|ENSMUSG00000031907.10|zinc finger protein 90	ENSMUST00000212606.2|Zfp90|ENSMUSG00000031907.10|zinc finger protein 90
mm39_v1_chr3_+_14951478_14951488	0.15695277721294817	Sox2	ENSMUST00000029078.9|Car2|ENSMUSG00000027562.13|carbonic anhydrase 2
mm39_v1_chr17_+_35354655_35354774	0.15694944406740904	Sox2	ENSMUST00000174478.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000174281.9|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173550.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr9_-_75317233_75317320	0.15659184365600906	Sox2	ENSMUST00000049355.11|Mapk6|ENSMUSG00000042688.17|mitogen-activated protein kinase 6
mm39_v1_chr5_-_142803405_142803422	0.15616579007372103	Sox2	ENSMUST00000151477.8|Tnrc18|ENSMUSG00000039477.17|trinucleotide repeat containing 18
mm39_v1_chr6_+_86381318_86381362	0.15443301165670695	Sox2	ENSMUST00000113713.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr1_-_163141230_163141246	0.1543808418530048	Sox2	ENSMUST00000174397.3|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1	ENSMUST00000075805.13|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr1_-_189075515_189075555	0.15370557663564094	Sox2	ENSMUST00000193319.6|Kcnk2|ENSMUSG00000037624.16|potassium channel, subfamily K, member 2
mm39_v1_chrX_+_101048650_101048681	0.15334097467905966	Sox2	ENSMUST00000144753.2|Nhsl2|ENSMUSG00000079481.12|NHS-like 2
mm39_v1_chr9_+_109961079_109961170	0.15329964357180204	Sox2	ENSMUST00000197480.5|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	ENSMUST00000197984.5|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	ENSMUST00000199896.2|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm39_v1_chr10_-_80895949_80896039	0.15267307913714684	Sox2	ENSMUST00000219401.2|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	ENSMUST00000220317.2|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	ENSMUST00000005067.6|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	ENSMUST00000218208.2|Sgta|ENSMUSG00000004937.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm39_v1_chr16_+_43323970_43324005	0.15256747335485402	Sox2	ENSMUST00000126100.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000123047.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000156981.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr5_+_150183201_150183232	0.15242709427420081	Sox2	ENSMUST00000087204.9|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr12_+_25024913_25024992	0.1520722305828092	Sox2	ENSMUST00000066652.7|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000220459.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000222941.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220
mm39_v1_chr18_+_82493284_82493293	0.1515867392410488	Sox2	ENSMUST00000047865.14|Mbp|ENSMUSG00000041607.18|myelin basic protein
mm39_v1_chr3_+_102927901_102927980	0.15141647055004548	Sox2	ENSMUST00000198180.5|Csde1|ENSMUSG00000068823.11|cold shock domain containing E1, RNA binding	ENSMUST00000197827.5|Csde1|ENSMUSG00000068823.11|cold shock domain containing E1, RNA binding	ENSMUST00000199240.5|Csde1|ENSMUSG00000068823.11|cold shock domain containing E1, RNA binding	ENSMUST00000199420.5|Csde1|ENSMUSG00000068823.11|cold shock domain containing E1, RNA binding	ENSMUST00000199571.5|Csde1|ENSMUSG00000068823.11|cold shock domain containing E1, RNA binding	ENSMUST00000197488.5|Csde1|ENSMUSG00000068823.11|cold shock domain containing E1, RNA binding
mm39_v1_chr6_-_99703344_99703375	0.15100389958996116	Sox2	ENSMUST00000008273.8|Prok2|ENSMUSG00000030069.16|prokineticin 2	ENSMUST00000101120.11|Prok2|ENSMUSG00000030069.16|prokineticin 2	ENSMUST00000203738.2|Prok2|ENSMUSG00000030069.16|prokineticin 2
mm39_v1_chr1_-_36597313_36597346	0.15085669061170925	Sox2	ENSMUST00000195339.3|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm39_v1_chr7_+_110376859_110376904	0.1498950782769428	Sox2	ENSMUST00000148292.2|Ampd3|ENSMUSG00000005686.18|adenosine monophosphate deaminase 3
mm39_v1_chr11_-_114851243_114851343	0.1497408325181674	Sox2	ENSMUST00000092466.13|Cd300c|ENSMUSG00000058728.16|CD300C molecule	ENSMUST00000061637.4|Cd300c|ENSMUSG00000058728.16|CD300C molecule
mm39_v1_chr14_+_121272950_121272990	0.1496290177253471	Sox2	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chr3_+_131270648_131270670	0.14910906635867396	Sox2	ENSMUST00000199878.5|Papss1|ENSMUSG00000028032.14|3'-phosphoadenosine 5'-phosphosulfate synthase 1	ENSMUST00000196408.5|Papss1|ENSMUSG00000028032.14|3'-phosphoadenosine 5'-phosphosulfate synthase 1	ENSMUST00000200527.5|Papss1|ENSMUSG00000028032.14|3'-phosphoadenosine 5'-phosphosulfate synthase 1
mm39_v1_chr11_-_8614667_8614681	0.14906695706759052	Sox2	ENSMUST00000239111.2|Tns3|ENSMUSG00000020422.15|tensin 3
mm39_v1_chr2_-_34848148_34848186	0.14724352497031584	Sox2	ENSMUST00000201690.2|Traf1|ENSMUSG00000026875.15|TNF receptor-associated factor 1	ENSMUST00000172159.8|Traf1|ENSMUSG00000026875.15|TNF receptor-associated factor 1
mm39_v1_chr17_+_73225292_73225311	0.1467112194430156	Sox2	ENSMUST00000024857.14|Lbh|ENSMUSG00000024063.14|limb-bud and heart
mm39_v1_chr3_+_88049633_88049790	0.1465725326926877	Sox2	ENSMUST00000001455.13|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D	ENSMUST00000119251.8|Mef2d|ENSMUSG00000001419.18|myocyte enhancer factor 2D
mm39_v1_chr10_-_62628008_62628070	0.14654437414471136	Sox2	ENSMUST00000217768.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000020268.7|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000218946.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1	ENSMUST00000219527.2|Ccar1|ENSMUSG00000020074.8|cell division cycle and apoptosis regulator 1
mm39_v1_chr8_-_33374282_33374329	0.14619592891830718	Sox2	ENSMUST00000209107.4|Nrg1|ENSMUSG00000062991.10|neuregulin 1	ENSMUST00000209022.3|Nrg1|ENSMUSG00000062991.10|neuregulin 1
mm39_v1_chr11_-_106811507_106811599	0.14552066555178075	Sox2	ENSMUST00000103067.10|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chr1_-_175520185_175520467	0.14549486345189566	Sox2	ENSMUST00000104984.4|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000209720.2|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000211489.2|Chml|ENSMUSG00000078185.4|choroideremia-like	ENSMUST00000027809.8|Opn3|ENSMUSG00000026525.10|opsin 3	ENSMUST00000210367.2|Chml|ENSMUSG00000078185.4|choroideremia-like
mm39_v1_chr9_+_109961048_109961067	0.14493166041274047	Sox2	ENSMUST00000088716.12|Smarcc1|ENSMUSG00000032481.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm39_v1_chr7_+_141503719_141503823	0.14488658109709923	Sox2	ENSMUST00000105989.9|Brsk2|ENSMUSG00000053046.17|BR serine/threonine kinase 2	ENSMUST00000075528.12|Brsk2|ENSMUSG00000053046.17|BR serine/threonine kinase 2	ENSMUST00000174499.8|Brsk2|ENSMUSG00000053046.17|BR serine/threonine kinase 2
mm39_v1_chr13_-_18118736_18118824	0.14478793076008292	Sox2	ENSMUST00000009003.9|Rala|ENSMUSG00000008859.9|v-ral simian leukemia viral oncogene A (ras related)
mm39_v1_chr15_+_99600475_99600537	0.14357729842978978	Sox2	ENSMUST00000228984.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	ENSMUST00000229845.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr15_-_85387428_85387428	0.14301944852336507	Sox2	ENSMUST00000178942.2|7530416G11Rik|ENSMUSG00000096607.2|RIKEN cDNA 7530416G11 gene
mm39_v1_chr10_-_30647881_30647937	0.14301730495637602	Sox2	ENSMUST00000215740.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr4_+_130519788_130519983	0.14275268167716168	Sox2	ENSMUST00000070478.4|Sdc3|ENSMUSG00000025743.15|syndecan 3
mm39_v1_chr9_+_21279299_21279332	0.14249287236376884	Sox2	ENSMUST00000214852.2|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3	ENSMUST00000115414.3|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3
mm39_v1_chr6_+_92069376_92069414	0.14241466260720806	Sox2	ENSMUST00000113463.8|Nr2c2|ENSMUSG00000005893.15|nuclear receptor subfamily 2, group C, member 2
mm39_v1_chr2_+_156562989_156563004	0.1418487755468785	Sox2	ENSMUST00000000094.14|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4
mm39_v1_chr8_+_45388466_45388484	0.14160240876192093	Sox2	ENSMUST00000191428.7|Fat1|ENSMUSG00000070047.15|FAT atypical cadherin 1
mm39_v1_chr8_-_106363982_106364025	0.14120178993048532	Sox2	ENSMUST00000182863.2|Gm5914|ENSMUSG00000098120.2|predicted gene 5914	ENSMUST00000194091.6|Agrp|ENSMUSG00000005705.11|agouti related neuropeptide
mm39_v1_chr1_+_64572050_64572059	0.14108891659007414	Sox2	ENSMUST00000190348.2|Creb1|ENSMUSG00000025958.15|cAMP responsive element binding protein 1
mm39_v1_chr1_+_97697881_97697935	0.1399020891544947	Sox2	ENSMUST00000112844.10|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1	ENSMUST00000112842.8|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1	ENSMUST00000027571.13|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1
mm39_v1_chr6_-_29380467_29380512	0.13945000261911641	Sox2	ENSMUST00000080428.13|Opn1sw|ENSMUSG00000058831.14|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm39_v1_chr16_+_32096267_32096295	0.13908388831382365	Sox2	ENSMUST00000014218.15|Rnf168|ENSMUSG00000014074.18|ring finger protein 168	ENSMUST00000171474.2|Rnf168|ENSMUSG00000014074.18|ring finger protein 168
mm39_v1_chr4_-_141351110_141351151	0.13905958394958617	Sox2	ENSMUST00000038661.8|Slc25a34|ENSMUSG00000040740.8|solute carrier family 25, member 34
mm39_v1_chr2_+_89821565_89821582	0.1390309484155348	Sox2	ENSMUST00000111509.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261	ENSMUST00000213909.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261
mm39_v1_chr9_+_108924457_108924480	0.13894824533995523	Sox2	ENSMUST00000072093.13|Plxnb1|ENSMUSG00000053646.14|plexin B1
mm39_v1_chr7_+_4785936_4785958	0.13889883262207528	Sox2	ENSMUST00000013235.6|Tmem190|ENSMUSG00000013091.6|transmembrane protein 190
mm39_v1_chr9_+_74883377_74883460	0.13862751970772938	Sox2	ENSMUST00000081746.7|Fam214a|ENSMUSG00000034858.17|family with sequence similarity 214, member A
mm39_v1_chr12_+_21161779_21161955	0.13858780841281798	Sox2	ENSMUST00000050990.10|Asap2|ENSMUSG00000052632.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
mm39_v1_chr9_-_108338111_108338275	0.13828833507385369	Sox2	ENSMUST00000193895.6|Klhdc8b|ENSMUSG00000032609.13|kelch domain containing 8B
mm39_v1_chr2_+_89821818_89821818	0.13737687478732624	Sox2	ENSMUST00000216953.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261
mm39_v1_chr16_-_3726503_3726554	0.13692935090743075	Sox2	ENSMUST00000115859.8|1700037C18Rik|ENSMUSG00000005983.16|RIKEN cDNA 1700037C18 gene
mm39_v1_chr3_-_123484499_123484510	0.1367513143368554	Sox2	ENSMUST00000154668.8|Ndst3|ENSMUSG00000027977.16|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm39_v1_chr1_-_136273811_136273884	0.13650019052377482	Sox2	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr7_+_99184645_99184709	0.13568886283970183	Sox2	ENSMUST00000098266.9|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1	ENSMUST00000179755.8|Arrb1|ENSMUSG00000018909.16|arrestin, beta 1
mm39_v1_chr3_+_65016750_65016838	0.1354451148535452	Sox2	ENSMUST00000049230.11|Kcnab1|ENSMUSG00000027827.18|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm39_v1_chr15_-_77527470_77527486	0.13542441005323008	Sox2	ENSMUST00000181154.2|Apol11b|ENSMUSG00000091694.10|apolipoprotein L 11b	ENSMUST00000180949.8|Apol11b|ENSMUSG00000091694.10|apolipoprotein L 11b	ENSMUST00000166623.10|Apol11b|ENSMUSG00000091694.10|apolipoprotein L 11b
mm39_v1_chr14_+_30741082_30741114	0.13453061672938055	Sox2	ENSMUST00000112098.11|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112095.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112106.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000146325.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chr8_+_107142031_107142044	0.13450762902587796	Sox2	ENSMUST00000212874.2|Zfp90|ENSMUSG00000031907.10|zinc finger protein 90
mm39_v1_chr2_+_111120973_111120973	0.13444004234593915	Sox2	ENSMUST00000213727.2|Olfr1278|ENSMUSG00000068647.3|olfactory receptor 1278
mm39_v1_chr6_+_47812584_47812660	0.1343399972472727	Sox2	ENSMUST00000079881.11|Zfp398|ENSMUSG00000062519.14|zinc finger protein 398	ENSMUST00000114598.3|Zfp398|ENSMUSG00000062519.14|zinc finger protein 398
mm39_v1_chr14_+_76082533_76082570	0.1325180466212247	Sox2	ENSMUST00000110894.9|Tpt1|ENSMUSG00000060126.15|tumor protein, translationally-controlled 1
mm39_v1_chr14_+_26359191_26359229	0.13246359746722483	Sox2	ENSMUST00000022429.9|Arf4|ENSMUSG00000021877.13|ADP-ribosylation factor 4
mm39_v1_chr16_+_18166045_18166138	0.13233832752514474	Sox2	ENSMUST00000239533.1|ARVCF|ENSMUSG00000118669.2|armadillo repeat deleted in velocardiofacial syndrome	ENSMUST00000239534.1|ARVCF|ENSMUSG00000118669.2|armadillo repeat deleted in velocardiofacial syndrome
mm39_v1_chr2_-_151815307_151815319	0.13191451090890352	Sox2	ENSMUST00000109863.2|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A
mm39_v1_chr8_+_71917554_71917643	0.13183166021134557	Sox2	ENSMUST00000048914.8|Mrpl34|ENSMUSG00000034880.8|mitochondrial ribosomal protein L34
mm39_v1_chr8_+_121215155_121215229	0.13131584704538357	Sox2	ENSMUST00000034279.16|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr16_-_18884431_18884431	0.13107206264490284	Sox2	ENSMUST00000200235.2|Iglc3|ENSMUSG00000105547.2|immunoglobulin lambda constant 3
mm39_v1_chr10_+_127000991_127001095	0.13101598452865146	Sox2	ENSMUST00000006914.11|B4galnt1|ENSMUSG00000006731.11|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm39_v1_chr18_-_47501897_47501945	0.13064439216485702	Sox2	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr10_+_43455919_43455941	0.13032369027588003	Sox2	ENSMUST00000214476.2|Cd24a|ENSMUSG00000047139.10|CD24a antigen
mm39_v1_chr16_+_44914397_44914416	0.12982827108316047	Sox2	ENSMUST00000061050.6|Ccdc80|ENSMUSG00000022665.16|coiled-coil domain containing 80
mm39_v1_chr4_+_122910382_122910406	0.12966537934084493	Sox2	ENSMUST00000102649.4|Trit1|ENSMUSG00000028653.17|tRNA isopentenyltransferase 1
mm39_v1_chr7_-_104628324_104628333	0.12818596043273278	Sox2	ENSMUST00000217091.2|Olfr671|ENSMUSG00000094531.4|olfactory receptor 671	ENSMUST00000210963.3|Olfr671|ENSMUSG00000094531.4|olfactory receptor 671
mm39_v1_chr5_+_65920861_65920886	0.12767881496232505	Sox2	ENSMUST00000201489.4|N4bp2|ENSMUSG00000037795.15|NEDD4 binding protein 2
mm39_v1_chr18_+_37622518_37622518	0.12730333250354897	Sox2	ENSMUST00000055949.4|Pcdhb18|ENSMUSG00000048347.6|protocadherin beta 18
mm39_v1_chr5_-_24652775_24652852	0.1271023572145248	Sox2	ENSMUST00000123167.2|Tmub1|ENSMUSG00000028958.16|transmembrane and ubiquitin-like domain containing 1	ENSMUST00000030799.15|Tmub1|ENSMUSG00000028958.16|transmembrane and ubiquitin-like domain containing 1
mm39_v1_chr2_+_85715984_85715984	0.1256578721590677	Sox2	ENSMUST00000213441.3|Olfr1023|ENSMUSG00000050128.6|olfactory receptor 1023
mm39_v1_chr2_+_156562929_156562951	0.1256365429560373	Sox2	ENSMUST00000131157.9|Dlgap4|ENSMUSG00000061689.16|DLG associated protein 4
mm39_v1_chr2_+_172314433_172314486	0.12553135832403198	Sox2	ENSMUST00000029007.3|Fam209|ENSMUSG00000027505.3|family with sequence similarity 209
mm39_v1_chr12_+_110567873_110567886	0.12464285701350045	Sox2	ENSMUST00000018851.14|Dync1h1|ENSMUSG00000018707.14|dynein cytoplasmic 1 heavy chain 1
mm39_v1_chr10_-_95337783_95337829	0.12458054301042899	Sox2	ENSMUST00000075829.3|Mrpl42|ENSMUSG00000062981.6|mitochondrial ribosomal protein L42	ENSMUST00000217777.2|Mrpl42|ENSMUSG00000062981.6|mitochondrial ribosomal protein L42	ENSMUST00000218893.2|Mrpl42|ENSMUSG00000062981.6|mitochondrial ribosomal protein L42
mm39_v1_chr7_+_101619019_101619047	0.12400392453803213	Sox2	ENSMUST00000084852.13|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chrX_-_7765459_7765510	0.12371435052359102	Sox2	ENSMUST00000033497.9|Pqbp1|ENSMUSG00000031157.11|polyglutamine binding protein 1
mm39_v1_chrX_-_165992311_165992475	0.12339424986917334	Sox2	ENSMUST00000112172.4|Tmsb4x|ENSMUSG00000049775.17|thymosin, beta 4, X chromosome
mm39_v1_chr18_+_69726431_69726521	0.12331977880861486	Sox2	ENSMUST00000201091.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000201037.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4	ENSMUST00000114977.5|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr4_+_132366298_132366430	0.12320548723073166	Sox2	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr4_-_129015682_129015856	0.1230218551305485	Sox2	ENSMUST00000139450.8|Hpca|ENSMUSG00000028785.14|hippocalcin	ENSMUST00000125931.9|Hpca|ENSMUSG00000028785.14|hippocalcin	ENSMUST00000116444.10|Hpca|ENSMUSG00000028785.14|hippocalcin
mm39_v1_chr13_+_14238361_14238407	0.12292920346042809	Sox2	ENSMUST00000129488.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110536.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110534.8|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000039538.15|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)	ENSMUST00000110533.2|Arid4b|ENSMUSG00000039219.19|AT rich interactive domain 4B (RBP1-like)
mm39_v1_chr4_+_136038263_136038296	0.12264096748467067	Sox2	ENSMUST00000105850.8|Hnrnpr|ENSMUSG00000066037.15|heterogeneous nuclear ribonucleoprotein R	ENSMUST00000148843.10|Hnrnpr|ENSMUSG00000066037.15|heterogeneous nuclear ribonucleoprotein R
mm39_v1_chr14_+_21549798_21549853	0.12251570846939211	Sox2	ENSMUST00000182855.8|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000182405.9|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B	ENSMUST00000069648.14|Kat6b|ENSMUSG00000021767.20|K(lysine) acetyltransferase 6B
mm39_v1_chr8_-_125390107_125390122	0.12241136249986721	Sox2	ENSMUST00000034464.8|2310022B05Rik|ENSMUSG00000031983.8|RIKEN cDNA 2310022B05 gene
mm39_v1_chr2_+_15060051_15060222	0.12224802024650533	Sox2	ENSMUST00000069870.11|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000239125.2|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B	ENSMUST00000193836.3|Arl5b|ENSMUSG00000017418.15|ADP-ribosylation factor-like 5B
mm39_v1_chr17_+_35354430_35354543	0.12163203218224783	Sox2	ENSMUST00000173535.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6	ENSMUST00000173952.8|Bag6|ENSMUSG00000024392.18|BCL2-associated athanogene 6
mm39_v1_chr10_+_42736345_42736373	0.12155581337682447	Sox2	ENSMUST00000063063.14|Scml4|ENSMUSG00000044770.15|Scm polycomb group protein like 4
mm39_v1_chr13_+_83652150_83652170	0.121482828993775	Sox2	ENSMUST00000198199.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr9_-_107749982_107750028	0.12104095398875177	Sox2	ENSMUST00000183032.8|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6	ENSMUST00000035201.13|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6
mm39_v1_chr2_-_143704853_143704870	0.12101655634993247	Sox2	ENSMUST00000099296.4|Bfsp1|ENSMUSG00000027420.14|beaded filament structural protein 1, in lens-CP94
mm39_v1_chr11_+_72686990_72687072	0.12077163209964853	Sox2	ENSMUST00000069395.7|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1	ENSMUST00000172220.8|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1
mm39_v1_chr6_+_128352419_128352466	0.1206717833352452	Sox2	ENSMUST00000130785.4|Tex52|ENSMUSG00000079304.6|testis expressed 52	ENSMUST00000100926.4|Tex52|ENSMUSG00000079304.6|testis expressed 52	ENSMUST00000204223.2|Gm44596|ENSMUSG00000108011.2|predicted gene 44596
mm39_v1_chr6_+_54016543_54016560	0.12007504542892987	Sox2	ENSMUST00000046856.14|Chn2|ENSMUSG00000004633.18|chimerin 2
mm39_v1_chr1_-_173703424_173703430	0.1197984855622455	Sox2	ENSMUST00000186442.7|Mndal|ENSMUSG00000090272.10|myeloid nuclear differentiation antigen like
mm39_v1_chrX_+_100473161_100473315	0.11930825456207463	Sox2	ENSMUST00000033673.7|Nono|ENSMUSG00000031311.18|non-POU-domain-containing, octamer binding protein
mm39_v1_chr7_+_125871761_125871791	0.11926886734443064	Sox2	ENSMUST00000056028.11|Sbk1|ENSMUSG00000042978.12|SH3-binding kinase 1
mm39_v1_chr14_+_4137837_4137930	0.11843103480542096	Sox2	ENSMUST00000022296.7|Ube2e1|ENSMUSG00000021774.14|ubiquitin-conjugating enzyme E2E 1
mm39_v1_chr10_+_79832313_79832339	0.11835437769226319	Sox2	ENSMUST00000132517.8|Abca7|ENSMUSG00000035722.16|ATP-binding cassette, sub-family A (ABC1), member 7
mm39_v1_chr12_-_14202041_14202070	0.11770588702411057	Sox2	ENSMUST00000020926.8|Lratd1|ENSMUSG00000020607.8|LRAT domain containing 1
mm39_v1_chr15_-_97729341_97729393	0.11760117877072822	Sox2	ENSMUST00000079838.14|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7	ENSMUST00000118294.8|Hdac7|ENSMUSG00000022475.20|histone deacetylase 7
mm39_v1_chr11_-_75329726_75329772	0.11740911981306482	Sox2	ENSMUST00000108437.8|Serpinf2|ENSMUSG00000038224.13|serine (or cysteine) peptidase inhibitor, clade F, member 2
mm39_v1_chr6_+_83011154_83011233	0.11638471244107547	Sox2	ENSMUST00000000707.9|Loxl3|ENSMUSG00000000693.11|lysyl oxidase-like 3	ENSMUST00000101257.4|Loxl3|ENSMUSG00000000693.11|lysyl oxidase-like 3
mm39_v1_chr2_-_7400997_7401052	0.11594394755195973	Sox2	ENSMUST00000137733.9|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr19_+_28967875_28967902	0.11568585179645614	Sox2	ENSMUST00000224599.2|Cdc37l1|ENSMUSG00000024780.8|cell division cycle 37-like 1	ENSMUST00000050148.5|Cdc37l1|ENSMUSG00000024780.8|cell division cycle 37-like 1
mm39_v1_chr10_+_27950809_27950870	0.11541824945855482	Sox2	ENSMUST00000166468.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218359.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218276.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K
mm39_v1_chr11_-_106811185_106811469	0.11499537875547139	Sox2	ENSMUST00000167787.2|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2	ENSMUST00000092517.9|Smurf2|ENSMUSG00000018363.17|SMAD specific E3 ubiquitin protein ligase 2
mm39_v1_chrX_-_63320543_63320608	0.11461187563920057	Sox2	ENSMUST00000114679.2|Slitrk4|ENSMUSG00000046699.15|SLIT and NTRK-like family, member 4	ENSMUST00000069926.14|Slitrk4|ENSMUSG00000046699.15|SLIT and NTRK-like family, member 4
mm39_v1_chr19_-_12093187_12093261	0.11461138794796918	Sox2	ENSMUST00000208391.3|Olfr1428|ENSMUSG00000067524.5|olfactory receptor 1428	ENSMUST00000214103.2|Olfr1428|ENSMUSG00000067524.5|olfactory receptor 1428
mm39_v1_chr5_-_86475595_86475615	0.11433730125771936	Sox2	ENSMUST00000122377.2|Tmprss11d|ENSMUSG00000061259.12|transmembrane protease, serine 11d
mm39_v1_chr11_-_72686853_72686968	0.11416126302026339	Sox2	ENSMUST00000156294.8|Cyb5d2|ENSMUSG00000057778.15|cytochrome b5 domain containing 2
mm39_v1_chr10_-_81463091_81463154	0.11410233798592226	Sox2	ENSMUST00000143424.2|Sirt6|ENSMUSG00000034748.17|sirtuin 6	ENSMUST00000119324.8|Sirt6|ENSMUSG00000034748.17|sirtuin 6
mm39_v1_chr2_+_32766126_32766253	0.11404537990550317	Sox2	ENSMUST00000028135.15|Niban2|ENSMUSG00000026796.17|niban apoptosis regulator 2
mm39_v1_chr7_+_99115211_99115242	0.11378881261639437	Sox2	ENSMUST00000037359.9|Klhl35|ENSMUSG00000035298.9|kelch-like 35
mm39_v1_chr5_-_123859153_123859175	0.11343687597614069	Sox2	ENSMUST00000196282.5|Zcchc8|ENSMUSG00000029427.12|zinc finger, CCHC domain containing 8
mm39_v1_chr2_-_168048984_168049062	0.11301307763075229	Sox2	ENSMUST00000088001.6|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr6_+_29735666_29735693	0.11277877806383035	Sox2	ENSMUST00000001812.5|Smo|ENSMUSG00000001761.8|smoothened, frizzled class receptor
mm39_v1_chr4_+_6191084_6191122	0.11251126875650098	Sox2	ENSMUST00000029907.6|Ubxn2b|ENSMUSG00000028243.6|UBX domain protein 2B
mm39_v1_chr14_+_54669054_54669131	0.11181355770025256	Sox2	ENSMUST00000089688.6|Mmp14|ENSMUSG00000000957.12|matrix metallopeptidase 14 (membrane-inserted)	ENSMUST00000225641.2|Mmp14|ENSMUSG00000000957.12|matrix metallopeptidase 14 (membrane-inserted)
mm39_v1_chr18_-_15536747_15536815	0.11068978715882333	Sox2	ENSMUST00000079081.8|Aqp4|ENSMUSG00000024411.12|aquaporin 4
mm39_v1_chr3_+_60408678_60408699	0.11053420152045845	Sox2	ENSMUST00000191747.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1	ENSMUST00000194069.6|Mbnl1|ENSMUSG00000027763.14|muscleblind like splicing factor 1
mm39_v1_chr10_+_74873121_74873162	0.10960196624326281	Sox2	ENSMUST00000139384.9|Rab36|ENSMUSG00000020175.16|RAB36, member RAS oncogene family
mm39_v1_chr19_-_7584468_7584568	0.10936240691072464	Sox2	ENSMUST00000079902.6|Lgals12|ENSMUSG00000024972.17|lectin, galactose binding, soluble 12	ENSMUST00000099729.10|Lgals12|ENSMUSG00000024972.17|lectin, galactose binding, soluble 12	ENSMUST00000159983.8|Lgals12|ENSMUSG00000024972.17|lectin, galactose binding, soluble 12
mm39_v1_chr9_-_107749947_107749980	0.10935150410883852	Sox2	ENSMUST00000195866.6|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6
mm39_v1_chr16_+_4653271_4653286	0.10930785057619935	Sox2	ENSMUST00000100211.11|4930562C15Rik|ENSMUSG00000022518.17|RIKEN cDNA 4930562C15 gene
mm39_v1_chr15_+_39522905_39522982	0.10922138655523374	Sox2	ENSMUST00000226410.2|Rims2|ENSMUSG00000037386.17|regulating synaptic membrane exocytosis 2
mm39_v1_chr3_+_7568481_7568564	0.10915623111609425	Sox2	ENSMUST00000051064.9|Zc2hc1a|ENSMUSG00000043542.13|zinc finger, C2HC-type containing 1A	ENSMUST00000193010.2|Zc2hc1a|ENSMUSG00000043542.13|zinc finger, C2HC-type containing 1A
mm39_v1_chr5_+_77413282_77413396	0.10909447675763763	Sox2	ENSMUST00000080359.12|Rest|ENSMUSG00000029249.16|RE1-silencing transcription factor
mm39_v1_chr2_-_165740864_165740936	0.10883731887310152	Sox2	ENSMUST00000136842.2|Zmynd8|ENSMUSG00000039671.19|zinc finger, MYND-type containing 8
mm39_v1_chr12_+_52746158_52746186	0.10869389001868357	Sox2	ENSMUST00000095737.5|Akap6|ENSMUSG00000061603.9|A kinase (PRKA) anchor protein 6
mm39_v1_chr10_-_4338032_4338108	0.10839151915385191	Sox2	ENSMUST00000100078.10|Zbtb2|ENSMUSG00000075327.11|zinc finger and BTB domain containing 2
mm39_v1_chr17_+_55752485_55752551	0.10837233935975708	Sox2	ENSMUST00000025000.4|St6gal2|ENSMUSG00000024172.11|beta galactoside alpha 2,6 sialyltransferase 2
mm39_v1_chr18_+_4994600_4994623	0.10781020191109529	Sox2	ENSMUST00000140448.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr6_+_34575435_34575521	0.10764090595459216	Sox2	ENSMUST00000079391.10|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000142512.8|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000115027.8|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000115026.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr5_+_74696110_74696185	0.10757729086399748	Sox2	ENSMUST00000080164.12|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000113536.8|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000113534.9|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000113535.9|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)	ENSMUST00000120618.6|Fip1l1|ENSMUSG00000029227.16|FIP1 like 1 (S. cerevisiae)
mm39_v1_chrX_+_18028814_18028897	0.10752613174606195	Sox2	ENSMUST00000044484.13|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A	ENSMUST00000052368.9|Kdm6a|ENSMUSG00000037369.18|lysine (K)-specific demethylase 6A
mm39_v1_chr5_+_3978266_3978300	0.10713437979045688	Sox2	ENSMUST00000044492.10|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr9_+_21279179_21279267	0.1069378941693971	Sox2	ENSMUST00000213518.2|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3	ENSMUST00000216892.2|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3
mm39_v1_chr14_-_50020788_50020848	0.10683742144782103	Sox2	ENSMUST00000118129.2|Armh4|ENSMUSG00000036242.16|armadillo-like helical domain containing 4	ENSMUST00000036972.14|Armh4|ENSMUSG00000036242.16|armadillo-like helical domain containing 4
mm39_v1_chr7_-_126184935_126185027	0.10653823812842576	Sox2	ENSMUST00000084589.11|Cln3|ENSMUSG00000030720.17|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm39_v1_chr18_-_88912322_88912344	0.1060894677327336	Sox2	ENSMUST00000123826.2|Socs6|ENSMUSG00000056153.16|suppressor of cytokine signaling 6
mm39_v1_chr3_+_14951264_14951380	0.10594250746233443	Sox2	ENSMUST00000192609.6|Car2|ENSMUSG00000027562.13|carbonic anhydrase 2
mm39_v1_chr3_-_89309944_89310100	0.10568194571640917	Sox2	ENSMUST00000057431.6|Lenep|ENSMUSG00000078173.4|lens epithelial protein
mm39_v1_chr2_-_30364219_30364239	0.10532590651814869	Sox2	ENSMUST00000065134.4|Ier5l|ENSMUSG00000089762.4|immediate early response 5-like
mm39_v1_chr9_-_107749886_107749941	0.10457253786920244	Sox2	ENSMUST00000195883.6|Rbm6|ENSMUSG00000032582.15|RNA binding motif protein 6
mm39_v1_chr10_-_30531768_30531807	0.10402085957000472	Sox2	ENSMUST00000092610.12|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr7_-_104250951_104250986	0.10359691789997744	Sox2	ENSMUST00000216750.2|Olfr655|ENSMUSG00000051182.6|olfactory receptor 655	ENSMUST00000215538.2|Olfr655|ENSMUSG00000051182.6|olfactory receptor 655
mm39_v1_chr7_+_45135682_45135698	0.10346445988274573	Sox2	ENSMUST00000210813.2|Tulp2|ENSMUSG00000023467.19|tubby-like protein 2	ENSMUST00000107759.10|Tulp2|ENSMUSG00000023467.19|tubby-like protein 2
mm39_v1_chr7_-_99477551_99477624	0.10345812786158827	Sox2	ENSMUST00000036331.7|Neu3|ENSMUSG00000035239.7|neuraminidase 3
mm39_v1_chr10_+_67021509_67021547	0.10276593239531524	Sox2	ENSMUST00000173689.8|Jmjd1c|ENSMUSG00000037876.18|jumonji domain containing 1C
mm39_v1_chr3_-_57754901_57755021	0.10256822222522995	Sox2	ENSMUST00000120289.3|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr6_+_125529911_125529943	0.10234280897756488	Sox2	ENSMUST00000112254.8|Vwf|ENSMUSG00000001930.18|Von Willebrand factor	ENSMUST00000112253.6|Vwf|ENSMUSG00000001930.18|Von Willebrand factor
mm39_v1_chr17_-_24863907_24863951	0.10234221205968784	Sox2	ENSMUST00000234505.2|Slc9a3r2|ENSMUSG00000002504.16|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm39_v1_chr16_-_97652994_97653055	0.1019584938856827	Sox2	ENSMUST00000121584.8|Prdm15|ENSMUSG00000014039.19|PR domain containing 15
mm39_v1_chr14_-_70855980_70856014	0.10163201159588325	Sox2	ENSMUST00000228001.2|Dmtn|ENSMUSG00000022099.18|dematin actin binding protein
mm39_v1_chr5_-_146521629_146521691	0.10143985647774287	Sox2	ENSMUST00000200112.2|Gpr12|ENSMUSG00000041468.8|G-protein coupled receptor 12	ENSMUST00000197431.2|Gpr12|ENSMUSG00000041468.8|G-protein coupled receptor 12	ENSMUST00000197825.2|Gpr12|ENSMUSG00000041468.8|G-protein coupled receptor 12
mm39_v1_chr2_-_6889685_6889782	0.10141278026493053	Sox2	ENSMUST00000183091.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000182851.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr16_+_17051423_17051528	0.10138804425709545	Sox2	ENSMUST00000090190.14|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2	ENSMUST00000232426.2|Gm49573|ENSMUSG00000116743.2|predicted gene, 49573	ENSMUST00000232082.2|Hic2|ENSMUSG00000050240.17|hypermethylated in cancer 2
mm39_v1_chr5_-_148865429_148865480	0.10133865534893634	Sox2	ENSMUST00000149169.3|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1	ENSMUST00000047257.15|Katnal1|ENSMUSG00000041298.16|katanin p60 subunit A-like 1
mm39_v1_chr5_+_106024398_106024451	0.1011959141669362	Sox2	ENSMUST00000150440.8|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326	ENSMUST00000031227.11|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326
mm39_v1_chr3_+_146205864_146205888	0.10074902675471588	Sox2	ENSMUST00000119130.2|Gng5|ENSMUSG00000068523.13|guanine nucleotide binding protein (G protein), gamma 5
mm39_v1_chr17_+_47815998_47816009	0.10066685274223784	Sox2	ENSMUST00000183210.2|Ccnd3|ENSMUSG00000034165.17|cyclin D3
mm39_v1_chr16_-_90841360_90841431	0.10061203240410473	Sox2	ENSMUST00000118522.8|Paxbp1|ENSMUSG00000022974.13|PAX3 and PAX7 binding protein 1
mm39_v1_chr1_-_163141278_163141281	0.10058620690253538	Sox2	ENSMUST00000027878.14|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr5_-_137834470_137834543	0.10041583206035783	Sox2	ENSMUST00000110980.2|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha	ENSMUST00000058897.11|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha	ENSMUST00000199028.2|Pilra|ENSMUSG00000046245.14|paired immunoglobin-like type 2 receptor alpha
mm39_v1_chr11_-_106050927_106050994	0.10030631224865033	Sox2	ENSMUST00000045923.10|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr4_+_135899678_135899738	0.10010116622706852	Sox2	ENSMUST00000061721.6|E2f2|ENSMUSG00000018983.10|E2F transcription factor 2
mm39_v1_chr3_+_94385661_94385801	0.10008478858079173	Sox2	ENSMUST00000200342.5|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr12_-_40495753_40495901	0.1000447871323834	Sox2	ENSMUST00000069692.10|Zfp277|ENSMUSG00000055917.16|zinc finger protein 277	ENSMUST00000069637.15|Zfp277|ENSMUSG00000055917.16|zinc finger protein 277
mm39_v1_chr11_-_28534260_28534325	0.09981738243808963	Sox2	ENSMUST00000093253.10|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000109502.9|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A	ENSMUST00000042534.15|Ccdc85a|ENSMUSG00000032878.17|coiled-coil domain containing 85A
mm39_v1_chr16_+_34815177_34815240	0.09978594621431942	Sox2	ENSMUST00000231589.2|Mylk|ENSMUSG00000022836.12|myosin, light polypeptide kinase
mm39_v1_chr2_-_57004933_57005050	0.09910407213149883	Sox2	ENSMUST00000028166.9|Nr4a2|ENSMUSG00000026826.14|nuclear receptor subfamily 4, group A, member 2
mm39_v1_chr4_+_136038301_136038365	0.09902551968004271	Sox2	ENSMUST00000084219.12|Hnrnpr|ENSMUSG00000066037.15|heterogeneous nuclear ribonucleoprotein R
mm39_v1_chr12_-_110945415_110945474	0.09883527507841891	Sox2	ENSMUST00000135131.2|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9	ENSMUST00000043459.13|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9	ENSMUST00000128353.8|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr10_-_128481833_128481881	0.09830017099498925	Sox2	ENSMUST00000133342.10|Ikzf4|ENSMUSG00000002578.19|IKAROS family zinc finger 4
mm39_v1_chr19_-_7183596_7183607	0.09812876469801755	Sox2	ENSMUST00000123594.8|Otub1|ENSMUSG00000024767.12|OTU domain, ubiquitin aldehyde binding 1
mm39_v1_chr11_-_86698484_86698572	0.09810293678080148	Sox2	ENSMUST00000018569.14|Dhx40|ENSMUSG00000018425.19|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm39_v1_chr4_-_129590372_129590413	0.09809632261770984	Sox2	ENSMUST00000137640.3|Tmem39b|ENSMUSG00000053730.16|transmembrane protein 39b
mm39_v1_chr9_-_19799300_19799300	0.09765886276131326	Sox2	ENSMUST00000079660.5|Olfr862|ENSMUSG00000063842.6|olfactory receptor 862
mm39_v1_chr2_-_30305472_30305568	0.09680990140285439	Sox2	ENSMUST00000134120.2|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase	ENSMUST00000102854.10|Crat|ENSMUSG00000026853.16|carnitine acetyltransferase
mm39_v1_chr9_+_20554586_20554638	0.09667061745453726	Sox2	ENSMUST00000129414.9|Ubl5|ENSMUSG00000084786.10|ubiquitin-like 5
mm39_v1_chr12_-_36092475_36092516	0.09655075496234997	Sox2	ENSMUST00000020896.17|Tspan13|ENSMUSG00000020577.18|tetraspanin 13
mm39_v1_chr19_+_5790918_5790937	0.09637315396187128	Sox2	ENSMUST00000081496.6|Ltbp3|ENSMUSG00000024940.12|latent transforming growth factor beta binding protein 3
mm39_v1_chrX_+_72800675_72800711	0.09548755967697899	Sox2	ENSMUST00000002079.7|Plxnb3|ENSMUSG00000031385.15|plexin B3
mm39_v1_chr6_-_57938488_57938488	0.09546755172086305	Sox2	ENSMUST00000228097.2|Vmn1r24|ENSMUSG00000115507.2|vomeronasal 1 receptor 24
mm39_v1_chr12_-_69403892_69403956	0.09537164180754135	Sox2	ENSMUST00000222065.2|Nemf|ENSMUSG00000020982.10|nuclear export mediator factor	ENSMUST00000021368.10|Nemf|ENSMUSG00000020982.10|nuclear export mediator factor
mm39_v1_chr19_+_4806859_4806933	0.09489382083670557	Sox2	ENSMUST00000237921.2|Rbm4b|ENSMUSG00000033760.18|RNA binding motif protein 4B
mm39_v1_chr10_+_116137277_116137333	0.09471012702241495	Sox2	ENSMUST00000092167.7|Ptprb|ENSMUSG00000020154.11|protein tyrosine phosphatase, receptor type, B
mm39_v1_chr19_+_30007910_30007928	0.09452255315841553	Sox2	ENSMUST00000025739.14|Uhrf2|ENSMUSG00000024817.14|ubiquitin-like, containing PHD and RING finger domains 2
mm39_v1_chr4_+_136038243_136038258	0.09450058950089117	Sox2	ENSMUST00000131671.8|Hnrnpr|ENSMUSG00000066037.15|heterogeneous nuclear ribonucleoprotein R
mm39_v1_chr1_-_132318039_132318105	0.09418005517364147	Sox2	ENSMUST00000132435.2|Tmcc2|ENSMUSG00000042066.17|transmembrane and coiled-coil domains 2
mm39_v1_chr2_+_26899935_26900094	0.09384560424811289	Sox2	ENSMUST00000114005.9|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114004.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114006.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000114007.8|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1	ENSMUST00000133807.2|Cacfd1|ENSMUSG00000015488.15|calcium channel flower domain containing 1
mm39_v1_chr5_-_105130522_105130584	0.09380094709108967	Sox2	ENSMUST00000031239.13|Abcg3|ENSMUSG00000029299.15|ATP binding cassette subfamily G member 3
mm39_v1_chr2_-_86857424_86857424	0.09363833494394559	Sox2	ENSMUST00000214857.2|Olfr1104|ENSMUSG00000075166.3|olfactory receptor 1104	ENSMUST00000215972.2|Olfr1104|ENSMUSG00000075166.3|olfactory receptor 1104
mm39_v1_chr2_+_155453103_155453136	0.09307997003651479	Sox2	ENSMUST00000092995.6|Myh7b|ENSMUSG00000074652.4|myosin, heavy chain 7B, cardiac muscle, beta
mm39_v1_chr8_+_26008773_26008788	0.09306062520063031	Sox2	ENSMUST00000084027.13|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000178276.8|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000179592.8|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1
mm39_v1_chr19_-_29721012_29721012	0.0928218138414821	Sox2	ENSMUST00000175764.9|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr7_-_141649003_141649043	0.09187391124917721	Sox2	ENSMUST00000039926.10|Dusp8|ENSMUSG00000037887.12|dual specificity phosphatase 8
mm39_v1_chr5_-_98178834_98178902	0.0917546798668782	Sox2	ENSMUST00000199088.2|Antxr2|ENSMUSG00000029338.14|anthrax toxin receptor 2
mm39_v1_chr16_-_95883588_95883680	0.09151399750992716	Sox2	ENSMUST00000099502.9|Brwd1|ENSMUSG00000022914.18|bromodomain and WD repeat domain containing 1	ENSMUST00000023631.17|Brwd1|ENSMUSG00000022914.18|bromodomain and WD repeat domain containing 1	ENSMUST00000232755.2|Brwd1|ENSMUSG00000022914.18|bromodomain and WD repeat domain containing 1
mm39_v1_chr1_+_132996237_132996317	0.09129409112052246	Sox2	ENSMUST00000239467.2|Pik3c2b|ENSMUSG00000026447.18|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
mm39_v1_chr5_-_73413888_73413979	0.09099844334241149	Sox2	ENSMUST00000101127.12|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr9_+_121196034_121196108	0.09093607507457781	Sox2	ENSMUST00000210636.2|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1	ENSMUST00000045903.8|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1
mm39_v1_chr19_-_8382424_8382475	0.09083514093201345	Sox2	ENSMUST00000064507.12|Slc22a30|ENSMUSG00000052562.16|solute carrier family 22, member 30	ENSMUST00000120540.2|Slc22a30|ENSMUSG00000052562.16|solute carrier family 22, member 30	ENSMUST00000096269.11|Slc22a30|ENSMUSG00000052562.16|solute carrier family 22, member 30
mm39_v1_chr9_+_102595628_102595767	0.09079002974600796	Sox2	ENSMUST00000156485.2|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2	ENSMUST00000145937.2|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2	ENSMUST00000134483.2|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2	ENSMUST00000190047.7|Amotl2|ENSMUSG00000032531.16|angiomotin-like 2
mm39_v1_chr11_-_60804601_60804642	0.09055803074176312	Sox2	ENSMUST00000019075.4|Natd1|ENSMUSG00000018931.4|N-acetyltransferase domain containing 1
mm39_v1_chr11_+_67477501_67477546	0.08981957295203896	Sox2	ENSMUST00000108680.2|Gas7|ENSMUSG00000033066.17|growth arrest specific 7
mm39_v1_chr7_+_120581719_120581737	0.08967439138039082	Sox2	ENSMUST00000033166.10|Mfsd13b|ENSMUSG00000030877.12|major facilitator superfamily domain containing 13B
mm39_v1_chr17_-_68311073_68311135	0.08934572066372112	Sox2	ENSMUST00000024840.12|Arhgap28|ENSMUSG00000024043.14|Rho GTPase activating protein 28
mm39_v1_chr14_+_69266566_69266687	0.08922471017135686	Sox2	ENSMUST00000014957.10|Stc1|ENSMUSG00000014813.10|stanniocalcin 1
mm39_v1_chr19_-_7183626_7183681	0.08874412296404051	Sox2	ENSMUST00000025679.11|Otub1|ENSMUSG00000024767.12|OTU domain, ubiquitin aldehyde binding 1
mm39_v1_chr18_-_88912415_88912441	0.08845104273744221	Sox2	ENSMUST00000145120.3|Socs6|ENSMUSG00000056153.16|suppressor of cytokine signaling 6
mm39_v1_chr8_-_11362731_11362826	0.08842802927465926	Sox2	ENSMUST00000033898.10|Col4a1|ENSMUSG00000031502.12|collagen, type IV, alpha 1
mm39_v1_chr2_-_39080701_39080762	0.08796731482190977	Sox2	ENSMUST00000142872.2|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion	ENSMUST00000038874.12|Scai|ENSMUSG00000035236.18|suppressor of cancer cell invasion
mm39_v1_chr2_-_126517458_126517512	0.0879230650815084	Sox2	ENSMUST00000103227.8|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000110425.9|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1	ENSMUST00000089745.11|Gabpb1|ENSMUSG00000027361.16|GA repeat binding protein, beta 1
mm39_v1_chr8_+_11606056_11606111	0.0873403411004988	Sox2	ENSMUST00000210740.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000210670.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000054399.6|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1	ENSMUST00000209646.2|Ing1|ENSMUSG00000045969.9|inhibitor of growth family, member 1
mm39_v1_chr7_+_6175481_6175530	0.08730808833935007	Sox2	ENSMUST00000108567.9|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444	ENSMUST00000207176.2|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444	ENSMUST00000054680.12|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444	ENSMUST00000108566.8|Zfp444|ENSMUSG00000044876.16|zinc finger protein 444
mm39_v1_chr15_-_102630496_102630572	0.0868267357543285	Sox2	ENSMUST00000171838.2|Calcoco1|ENSMUSG00000023055.11|calcium binding and coiled coil domain 1
mm39_v1_chr11_-_55042529_55042538	0.08664257047559473	Sox2	ENSMUST00000020502.9|Slc36a3|ENSMUSG00000049491.16|solute carrier family 36 (proton/amino acid symporter), member 3	ENSMUST00000069816.6|Slc36a3|ENSMUSG00000049491.16|solute carrier family 36 (proton/amino acid symporter), member 3
mm39_v1_chr10_-_33500583_33500765	0.0866215590721368	Sox2	ENSMUST00000161692.2|Clvs2|ENSMUSG00000019785.15|clavesin 2	ENSMUST00000160299.2|Clvs2|ENSMUSG00000019785.15|clavesin 2	ENSMUST00000019920.13|Clvs2|ENSMUSG00000019785.15|clavesin 2
mm39_v1_chr17_+_34544632_34544654	0.08622824959198959	Sox2	ENSMUST00000050325.10|H2-Eb2|ENSMUSG00000067341.7|histocompatibility 2, class II antigen E beta2
mm39_v1_chr5_-_136227760_136227824	0.0861341911176907	Sox2	ENSMUST00000149151.2|Prkrip1|ENSMUSG00000039737.12|Prkr interacting protein 1 (IL11 inducible)	ENSMUST00000151786.8|Prkrip1|ENSMUSG00000039737.12|Prkr interacting protein 1 (IL11 inducible)
mm39_v1_chr9_-_20888054_20888077	0.08599886620675176	Sox2	ENSMUST00000054197.7|S1pr2|ENSMUSG00000043895.7|sphingosine-1-phosphate receptor 2
mm39_v1_chr10_-_60667349_60667368	0.08594784473840561	Sox2	ENSMUST00000077925.7|Unc5b|ENSMUSG00000020099.9|unc-5 netrin receptor B
mm39_v1_chr4_-_44167509_44167609	0.08574049815003948	Sox2	ENSMUST00000098098.9|Rnf38|ENSMUSG00000035696.16|ring finger protein 38
mm39_v1_chr9_+_50679528_50679570	0.08518676718857231	Sox2	ENSMUST00000042391.13|Fdxacb1|ENSMUSG00000037845.15|ferredoxin-fold anticodon binding domain containing 1
mm39_v1_chr4_+_154954042_154954093	0.08506297586322688	Sox2	ENSMUST00000079269.14|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1	ENSMUST00000163732.8|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1	ENSMUST00000080559.13|Mmel1|ENSMUSG00000058183.15|membrane metallo-endopeptidase-like 1
mm39_v1_chr4_+_137589548_137589559	0.08434443566842688	Sox2	ENSMUST00000102518.10|Ece1|ENSMUSG00000057530.15|endothelin converting enzyme 1
mm39_v1_chr17_-_56769193_56769243	0.08426389471506844	Sox2	ENSMUST00000086828.10|Ptprs|ENSMUSG00000013236.18|protein tyrosine phosphatase, receptor type, S
mm39_v1_chr1_+_180978491_180978549	0.08415251654419247	Sox2	ENSMUST00000134115.8|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4	ENSMUST00000111059.2|Cnih4|ENSMUSG00000062169.14|cornichon family AMPA receptor auxiliary protein 4
mm39_v1_chr10_-_130230201_130230201	0.08406531700438113	Sox2	ENSMUST00000094502.6|Vmn2r84|ENSMUSG00000070601.6|vomeronasal 2, receptor 84	ENSMUST00000233146.2|Vmn2r84|ENSMUSG00000070601.6|vomeronasal 2, receptor 84
mm39_v1_chr12_+_8724220_8724278	0.08387146837031656	Sox2	ENSMUST00000111122.9|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2
mm39_v1_chr9_+_65268304_65268343	0.0837610036242821	Sox2	ENSMUST00000147185.3|Ubap1l|ENSMUSG00000086228.4|ubiquitin-associated protein 1-like
mm39_v1_chr9_+_86349207_86349225	0.08363309717857263	Sox2	ENSMUST00000190957.7|Dop1a|ENSMUSG00000034973.17|DOP1 leucine zipper like protein A
mm39_v1_chr11_-_120472022_120472206	0.0831444902613354	Sox2	ENSMUST00000067936.6|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr17_+_81251997_81252073	0.08230472028548337	Sox2	ENSMUST00000025092.5|Tmem178|ENSMUSG00000024245.5|transmembrane protein 178
mm39_v1_chr3_+_88439616_88439703	0.08220997527311387	Sox2	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chr10_+_42378193_42378286	0.08200107443997029	Sox2	ENSMUST00000105499.2|Snx3|ENSMUSG00000019804.13|sorting nexin 3
mm39_v1_chr3_+_95532282_95532332	0.08177660341355002	Sox2	ENSMUST00000058230.13|Ensa|ENSMUSG00000038619.13|endosulfine alpha	ENSMUST00000037983.6|Ensa|ENSMUSG00000038619.13|endosulfine alpha
mm39_v1_chr14_+_30741140_30741173	0.08141914625841574	Sox2	ENSMUST00000052239.12|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chr2_+_84564394_84564451	0.08130639251965138	Sox2	ENSMUST00000238573.2|Ypel4|ENSMUSG00000034059.15|yippee like 4	ENSMUST00000090729.9|Ypel4|ENSMUSG00000034059.15|yippee like 4
mm39_v1_chr18_+_89195089_89195152	0.08126517104734075	Sox2	ENSMUST00000236644.2|Cd226|ENSMUSG00000034028.17|CD226 antigen	ENSMUST00000236828.2|Cd226|ENSMUSG00000034028.17|CD226 antigen
mm39_v1_chr10_+_93871863_93871917	0.08051015010381433	Sox2	ENSMUST00000020208.5|Fgd6|ENSMUSG00000020021.5|FYVE, RhoGEF and PH domain containing 6
mm39_v1_chr10_+_84591919_84591948	0.08029794065986091	Sox2	ENSMUST00000060397.13|Rfx4|ENSMUSG00000020037.16|regulatory factor X, 4 (influences HLA class II expression)
mm39_v1_chr4_-_151946155_151946217	0.07996952904262775	Sox2	ENSMUST00000049790.14|Camta1|ENSMUSG00000014592.22|calmodulin binding transcription activator 1
mm39_v1_chr19_-_10217968_10218125	0.07982423281440339	Sox2	ENSMUST00000189897.2|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000186056.7|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000088013.12|Myrf|ENSMUSG00000036098.16|myelin regulatory factor
mm39_v1_chr11_+_3438274_3438287	0.07940745701276788	Sox2	ENSMUST00000064265.13|Pla2g3|ENSMUSG00000034579.18|phospholipase A2, group III
mm39_v1_chr15_+_27466732_27466783	0.07940520530194473	Sox2	ENSMUST00000022875.7|Ank|ENSMUSG00000022265.8|progressive ankylosis
mm39_v1_chr9_+_95519654_95519685	0.07908489714972126	Sox2	ENSMUST00000015498.9|Pcolce2|ENSMUSG00000015354.9|procollagen C-endopeptidase enhancer 2
mm39_v1_chr12_+_113103817_113103878	0.07903252085404958	Sox2	ENSMUST00000084882.9|Crip2|ENSMUSG00000006356.11|cysteine rich protein 2
mm39_v1_chr2_+_6327431_6327478	0.07868500730513428	Sox2	ENSMUST00000114937.8|Usp6nl|ENSMUSG00000039046.16|USP6 N-terminal like
mm39_v1_chr13_+_42862957_42863057	0.07862284998773197	Sox2	ENSMUST00000066928.12|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1	ENSMUST00000148891.8|Phactr1|ENSMUSG00000054728.18|phosphatase and actin regulator 1
mm39_v1_chr13_-_104056803_104056823	0.07828977587003233	Sox2	ENSMUST00000091269.11|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein	ENSMUST00000188997.7|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein	ENSMUST00000169083.8|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein	ENSMUST00000191275.7|Erbin|ENSMUSG00000021709.15|Erbb2 interacting protein
mm39_v1_chr7_+_140547134_140547280	0.07793555593299184	Sox2	ENSMUST00000106042.9|Ifitm1|ENSMUSG00000025491.15|interferon induced transmembrane protein 1
mm39_v1_chr5_-_18040713_18040739	0.07790845143908406	Sox2	ENSMUST00000197890.5|Cd36|ENSMUSG00000002944.16|CD36 molecule
mm39_v1_chr13_+_83652280_83652346	0.07730554696521479	Sox2	ENSMUST00000199450.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr17_+_35340431_35340554	0.07723170309368718	Sox2	ENSMUST00000173380.2|Gpank1|ENSMUSG00000092417.4|G patch domain and ankyrin repeats 1	ENSMUST00000173043.4|Gpank1|ENSMUSG00000092417.4|G patch domain and ankyrin repeats 1	ENSMUST00000165306.3|Gpank1|ENSMUSG00000092417.4|G patch domain and ankyrin repeats 1
mm39_v1_chr5_+_95665216_95665216	0.0768523491514316	Sox2	ENSMUST00000200932.4|Gm3286|ENSMUSG00000079423.7|predicted gene 3286
mm39_v1_chrX_+_56098908_56098975	0.0766218231795283	Sox2	ENSMUST00000114751.9|Htatsf1|ENSMUSG00000067873.12|HIV TAT specific factor 1	ENSMUST00000088652.6|Htatsf1|ENSMUSG00000067873.12|HIV TAT specific factor 1
mm39_v1_chr6_-_134543876_134543959	0.07649537773754081	Sox2	ENSMUST00000032322.15|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6	ENSMUST00000126836.4|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6
mm39_v1_chr15_-_79542950_79543001	0.07629426462810615	Sox2	ENSMUST00000109646.9|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A	ENSMUST00000187519.7|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A	ENSMUST00000229064.2|Fam227a|ENSMUSG00000042564.14|family with sequence similarity 227, member A
mm39_v1_chr17_-_34834938_34834952	0.07612433656543734	Sox2	ENSMUST00000097345.10|Egfl8|ENSMUSG00000015467.15|EGF-like domain 8	ENSMUST00000015611.14|Egfl8|ENSMUSG00000015467.15|EGF-like domain 8
mm39_v1_chrX_-_58211440_58211524	0.07589241824218887	Sox2	ENSMUST00000119306.2|Fgf13|ENSMUSG00000031137.18|fibroblast growth factor 13
mm39_v1_chr16_+_11223512_11223577	0.07587985872822653	Sox2	ENSMUST00000096273.9|Snx29|ENSMUSG00000071669.15|sorting nexin 29
mm39_v1_chr4_-_148236516_148236603	0.07529090496599765	Sox2	ENSMUST00000056965.12|Fbxo6|ENSMUSG00000055401.15|F-box protein 6	ENSMUST00000168503.8|Fbxo6|ENSMUSG00000055401.15|F-box protein 6	ENSMUST00000152098.8|Fbxo6|ENSMUSG00000055401.15|F-box protein 6
mm39_v1_chr3_+_96739458_96739507	0.07498180079485346	Sox2	ENSMUST00000107070.8|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1	ENSMUST00000107069.8|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1
mm39_v1_chr14_-_55019387_55019411	0.07491821406079169	Sox2	ENSMUST00000022787.8|Slc7a8|ENSMUSG00000022180.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm39_v1_chr6_+_97968737_97968882	0.07472775158407892	Sox2	ENSMUST00000043628.13|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000203938.2|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr13_-_93281065_93281232	0.07451159996632938	Sox2	ENSMUST00000062122.4|Cmya5|ENSMUSG00000047419.6|cardiomyopathy associated 5
mm39_v1_chr16_+_38383182_38383275	0.07438528273720604	Sox2	ENSMUST00000163948.8|Tmem39a|ENSMUSG00000002845.15|transmembrane protein 39a
mm39_v1_chr3_-_40801251_40801320	0.07421154019002439	Sox2	ENSMUST00000204017.2|Mfsd8|ENSMUSG00000025759.12|major facilitator superfamily domain containing 8	ENSMUST00000026859.11|Mfsd8|ENSMUSG00000025759.12|major facilitator superfamily domain containing 8
mm39_v1_chr13_+_56851317_56851481	0.07388905325086267	Sox2	ENSMUST00000109874.2|Smad5|ENSMUSG00000021540.17|SMAD family member 5
mm39_v1_chr4_+_116414855_116414932	0.07375562051994343	Sox2	ENSMUST00000030460.15|Gpbp1l1|ENSMUSG00000034042.17|GC-rich promoter binding protein 1-like 1
mm39_v1_chr7_-_131918926_131918957	0.07342851454216512	Sox2	ENSMUST00000080215.6|Chst15|ENSMUSG00000030930.15|carbohydrate sulfotransferase 15
mm39_v1_chr8_+_127790772_127791097	0.0734003188763229	Sox2	ENSMUST00000079777.12|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160272.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162907.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162536.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000026921.13|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162665.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162602.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160581.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000161355.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162531.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160766.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000159537.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr1_-_135032972_135033014	0.07304105964049602	Sox2	ENSMUST00000044828.14|Lgr6|ENSMUSG00000042793.14|leucine-rich repeat-containing G protein-coupled receptor 6
mm39_v1_chr7_-_3218968_3219029	0.07238604024877511	Sox2	ENSMUST00000171749.3|AU018091|ENSMUSG00000054753.10|expressed sequence AU018091
mm39_v1_chr19_-_5779648_5779717	0.0716875484229035	Sox2	ENSMUST00000116558.3|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000099955.4|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000161368.2|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B
mm39_v1_chr4_-_151946124_151946136	0.07139701781353905	Sox2	ENSMUST00000169423.9|Camta1|ENSMUSG00000014592.22|calmodulin binding transcription activator 1
mm39_v1_chr9_-_103638985_103639015	0.07127174922939312	Sox2	ENSMUST00000189066.2|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108
mm39_v1_chr12_+_108572015_108572072	0.07123913768450402	Sox2	ENSMUST00000109854.9|Evl|ENSMUSG00000021262.16|Ena-vasodilator stimulated phosphoprotein
mm39_v1_chr7_+_24181416_24181501	0.07080937010212132	Sox2	ENSMUST00000068023.8|Cadm4|ENSMUSG00000054793.9|cell adhesion molecule 4
mm39_v1_chr2_-_121637505_121637568	0.07077406510731213	Sox2	ENSMUST00000138157.8|Frmd5|ENSMUSG00000027238.18|FERM domain containing 5
mm39_v1_chr10_-_93871567_93871679	0.07057849867128886	Sox2	ENSMUST00000118077.8|Vezt|ENSMUSG00000036099.17|vezatin, adherens junctions transmembrane protein	ENSMUST00000118205.8|Vezt|ENSMUSG00000036099.17|vezatin, adherens junctions transmembrane protein	ENSMUST00000047711.13|Vezt|ENSMUSG00000036099.17|vezatin, adherens junctions transmembrane protein	ENSMUST00000123201.8|Vezt|ENSMUSG00000036099.17|vezatin, adherens junctions transmembrane protein	ENSMUST00000119818.8|Vezt|ENSMUSG00000036099.17|vezatin, adherens junctions transmembrane protein
mm39_v1_chr11_-_95200382_95200428	0.06983159519115849	Sox2	ENSMUST00000092766.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7	ENSMUST00000072621.12|Kat7|ENSMUSG00000038909.17|K(lysine) acetyltransferase 7
mm39_v1_chr15_+_10952418_10952449	0.06977405091500613	Sox2	ENSMUST00000022853.15|C1qtnf3|ENSMUSG00000058914.13|C1q and tumor necrosis factor related protein 3	ENSMUST00000110523.2|C1qtnf3|ENSMUSG00000058914.13|C1q and tumor necrosis factor related protein 3
mm39_v1_chr10_-_57408585_57408626	0.06939742535019694	Sox2	ENSMUST00000020027.11|Serinc1|ENSMUSG00000019877.11|serine incorporator 1
mm39_v1_chr16_+_31482658_31482731	0.06935166631935541	Sox2	ENSMUST00000115201.8|Dlg1|ENSMUSG00000022770.18|discs large MAGUK scaffold protein 1
mm39_v1_chr8_+_124059414_124059480	0.0691628229244544	Sox2	ENSMUST00000010298.7|Spire2|ENSMUSG00000010154.8|spire type actin nucleation factor 2
mm39_v1_chr17_+_35460722_35460846	0.06856224901304946	Sox2	ENSMUST00000068056.12|Ddx39b|ENSMUSG00000019432.16|DEAD box helicase 39b	ENSMUST00000174757.8|Ddx39b|ENSMUSG00000019432.16|DEAD box helicase 39b	ENSMUST00000173731.8|Ddx39b|ENSMUSG00000019432.16|DEAD box helicase 39b
mm39_v1_chr13_-_54713180_54713248	0.06851164107890702	Sox2	ENSMUST00000026989.15|4833439L19Rik|ENSMUSG00000025871.19|RIKEN cDNA 4833439L19 gene
mm39_v1_chr11_-_72686627_72686682	0.06843671259487188	Sox2	ENSMUST00000079681.6|Cyb5d2|ENSMUSG00000057778.15|cytochrome b5 domain containing 2
mm39_v1_chr7_+_78922947_78922973	0.06840236772522297	Sox2	ENSMUST00000037315.13|Abhd2|ENSMUSG00000039202.13|abhydrolase domain containing 2
mm39_v1_chr7_-_44519196_44519212	0.06829085387122294	Sox2	ENSMUST00000046575.17|Ptov1|ENSMUSG00000038502.18|prostate tumor over expressed gene 1
mm39_v1_chr3_-_127019496_127019608	0.06792785480703555	Sox2	ENSMUST00000182064.9|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain	ENSMUST00000182452.8|Ank2|ENSMUSG00000032826.20|ankyrin 2, brain
mm39_v1_chr15_-_79138929_79138964	0.06729116523793584	Sox2	ENSMUST00000039752.4|Slc16a8|ENSMUSG00000032988.5|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm39_v1_chr5_-_137784912_137784930	0.06701553623504587	Sox2	ENSMUST00000031740.16|Mepce|ENSMUSG00000029726.17|methylphosphate capping enzyme
mm39_v1_chr12_+_79075924_79076002	0.06691320348783647	Sox2	ENSMUST00000039928.7|Plekhh1|ENSMUSG00000060716.8|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm39_v1_chr11_-_76468527_76468553	0.06616201045948725	Sox2	ENSMUST00000176179.8|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr1_+_40619215_40619255	0.06579622549508095	Sox2	ENSMUST00000027233.9|Slc9a4|ENSMUSG00000026065.9|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm39_v1_chr10_+_128846660_128846660	0.06556909574485222	Sox2	ENSMUST00000077460.5|Olfr763|ENSMUSG00000063374.5|olfactory receptor 763
mm39_v1_chr1_-_14380418_14380463	0.06492034472641824	Sox2	ENSMUST00000027066.13|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1	ENSMUST00000168081.9|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr9_+_22010512_22010583	0.06456030244612826	Sox2	ENSMUST00000214601.2|Cnn1|ENSMUSG00000001349.6|calponin 1	ENSMUST00000001384.6|Cnn1|ENSMUSG00000001349.6|calponin 1
mm39_v1_chr2_-_84605764_84605788	0.06420756043801683	Sox2	ENSMUST00000111641.2|Serping1|ENSMUSG00000023224.13|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm39_v1_chr2_+_164527000_164527071	0.06370409315926336	Sox2	ENSMUST00000088260.2|Wfdc13|ENSMUSG00000067704.2|WAP four-disulfide core domain 13
mm39_v1_chr17_-_26099832_26099832	0.0634526830555987	Sox2	ENSMUST00000176696.3|Wfikkn1|ENSMUSG00000071192.7|WAP, FS, Ig, KU, and NTR-containing protein 1
mm39_v1_chr6_-_70435020_70435039	0.06333902009945266	Sox2	ENSMUST00000198184.2|Igkv6-13|ENSMUSG00000076594.3|immunoglobulin kappa variable 6-13
mm39_v1_chr7_+_102834010_102834010	0.06297742364462075	Sox2	ENSMUST00000106893.3|Olfr592|ENSMUSG00000073956.4|olfactory receptor 592
mm39_v1_chr10_+_42378026_42378039	0.06274511985294629	Sox2	ENSMUST00000105500.8|Snx3|ENSMUSG00000019804.13|sorting nexin 3	ENSMUST00000019939.12|Snx3|ENSMUSG00000019804.13|sorting nexin 3
mm39_v1_chr2_+_3119371_3119429	0.06244928609223177	Sox2	ENSMUST00000115099.9|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr11_+_59995796_59995862	0.0622016725342864	Sox2	ENSMUST00000064190.13|Rai1|ENSMUSG00000062115.16|retinoic acid induced 1
mm39_v1_chr7_+_140547941_140547959	0.06192583462918556	Sox2	ENSMUST00000106040.8|Ifitm1|ENSMUSG00000025491.15|interferon induced transmembrane protein 1	ENSMUST00000026564.9|Ifitm1|ENSMUSG00000025491.15|interferon induced transmembrane protein 1
mm39_v1_chr11_-_50806962_50807006	0.06044250637436559	Sox2	ENSMUST00000116378.8|Zfp2|ENSMUSG00000049321.18|zinc finger protein 2	ENSMUST00000109128.8|Zfp2|ENSMUSG00000049321.18|zinc finger protein 2
mm39_v1_chr5_+_52521133_52521322	0.060000330730801646	Sox2	ENSMUST00000101208.6|Sod3|ENSMUSG00000072941.6|superoxide dismutase 3, extracellular
mm39_v1_chr2_-_6726417_6726440	0.059920259203212624	Sox2	ENSMUST00000142941.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000150624.9|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000100429.11|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2	ENSMUST00000182879.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr8_+_124138163_124138329	0.05976994906016619	Sox2	ENSMUST00000071134.4|Tubb3|ENSMUSG00000062380.5|tubulin, beta 3 class III	ENSMUST00000212743.2|Tubb3|ENSMUSG00000062380.5|tubulin, beta 3 class III
mm39_v1_chr2_+_119505543_119505589	0.05934042721550796	Sox2	ENSMUST00000028767.9|Rtf1|ENSMUSG00000027304.10|RTF1, Paf1/RNA polymerase II complex component
mm39_v1_chr11_+_62441992_62442018	0.059125725162005774	Sox2	ENSMUST00000019649.4|Ubb|ENSMUSG00000019505.8|ubiquitin B
mm39_v1_chr6_+_65019793_65019862	0.0587016126532001	Sox2	ENSMUST00000204696.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr1_-_190711151_190711199	0.05869769510959081	Sox2	ENSMUST00000047409.9|Vash2|ENSMUSG00000037568.13|vasohibin 2
mm39_v1_chr8_-_85414528_85414539	0.05831380595814887	Sox2	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr7_-_126194097_126194113	0.05817603877895908	Sox2	ENSMUST00000058429.6|Il27|ENSMUSG00000044701.6|interleukin 27
mm39_v1_chr6_-_144155197_144155294	0.058112102876782486	Sox2	ENSMUST00000038815.14|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111749.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000170367.9|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr10_+_74896383_74896461	0.057893025190732014	Sox2	ENSMUST00000164107.3|Bcr|ENSMUSG00000009681.11|BCR activator of RhoGEF and GTPase
mm39_v1_chr9_+_59485475_59485620	0.057876435198302406	Sox2	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr18_+_37617848_37617848	0.05766151515017812	Sox2	ENSMUST00000053856.6|Pcdhb17|ENSMUSG00000046387.6|protocadherin beta 17
mm39_v1_chr2_-_20973692_20973768	0.05765354171534818	Sox2	ENSMUST00000114594.8|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr9_+_21279161_21279178	0.057508182852080265	Sox2	ENSMUST00000067646.12|Ilf3|ENSMUSG00000032178.15|interleukin enhancer binding factor 3
mm39_v1_chr11_-_52165682_52165724	0.056684569824667755	Sox2	ENSMUST00000238914.2|Tcf7|ENSMUSG00000000782.17|transcription factor 7, T cell specific
mm39_v1_chr7_-_115423934_115423987	0.056651614052932446	Sox2	ENSMUST00000169129.8|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr19_+_12610870_12610897	0.05648130188638463	Sox2	ENSMUST00000119960.2|Glyat|ENSMUSG00000063683.13|glycine-N-acyltransferase
mm39_v1_chr10_-_39039790_39039790	0.055388144436302245	Sox2	ENSMUST00000076713.6|Ccn6|ENSMUSG00000062074.8|cellular communication network factor 6
mm39_v1_chr16_+_34510918_34510986	0.055207679779161946	Sox2	ENSMUST00000023532.7|Ccdc14|ENSMUSG00000022833.8|coiled-coil domain containing 14
mm39_v1_chr13_-_8908798_8908865	0.05518961755163033	Sox2	ENSMUST00000176329.8|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37
mm39_v1_chr2_+_33106121_33106144	0.05500262974743028	Sox2	ENSMUST00000193373.3|Angptl2|ENSMUSG00000004105.9|angiopoietin-like 2
mm39_v1_chr4_+_140737955_140738007	0.05487019484065071	Sox2	ENSMUST00000071977.9|Mfap2|ENSMUSG00000060572.18|microfibrillar-associated protein 2
mm39_v1_chr2_+_19204076_19204143	0.054472321795635735	Sox2	ENSMUST00000114640.9|Armc3|ENSMUSG00000037683.15|armadillo repeat containing 3	ENSMUST00000049255.7|Armc3|ENSMUSG00000037683.15|armadillo repeat containing 3
mm39_v1_chr17_+_44112679_44112753	0.054300765313900254	Sox2	ENSMUST00000229744.2|Rcan2|ENSMUSG00000039601.17|regulator of calcineurin 2
mm39_v1_chr10_-_63174801_63174821	0.054033256498186515	Sox2	ENSMUST00000020257.13|Sirt1|ENSMUSG00000020063.17|sirtuin 1	ENSMUST00000177694.8|Sirt1|ENSMUSG00000020063.17|sirtuin 1	ENSMUST00000105442.3|Sirt1|ENSMUSG00000020063.17|sirtuin 1
mm39_v1_chr4_-_84464521_84464537	0.05376302225662433	Sox2	ENSMUST00000177040.2|Bnc2|ENSMUSG00000028487.19|basonuclin 2
mm39_v1_chr6_-_50238723_50238769	0.053551976867870804	Sox2	ENSMUST00000101405.10|Gsdme|ENSMUSG00000029821.16|gasdermin E	ENSMUST00000165099.8|Gsdme|ENSMUSG00000029821.16|gasdermin E	ENSMUST00000170142.8|Gsdme|ENSMUSG00000029821.16|gasdermin E
mm39_v1_chr18_+_37610858_37610888	0.05340450893788635	Sox2	ENSMUST00000051442.7|Pcdhb16|ENSMUSG00000047910.7|protocadherin beta 16
mm39_v1_chr13_-_50404344_50404344	0.05313762491299296	Sox2	ENSMUST00000099521.2|Gm906|ENSMUSG00000095300.2|predicted gene 906
mm39_v1_chr11_-_116058961_116059030	0.05265100543850267	Sox2	ENSMUST00000139020.2|Fbf1|ENSMUSG00000020776.19|Fas (TNFRSF6) binding factor 1	ENSMUST00000103031.8|Fbf1|ENSMUSG00000020776.19|Fas (TNFRSF6) binding factor 1	ENSMUST00000124828.8|Fbf1|ENSMUSG00000020776.19|Fas (TNFRSF6) binding factor 1
mm39_v1_chr2_+_33106062_33106096	0.052532173536200724	Sox2	ENSMUST00000004208.7|Angptl2|ENSMUSG00000004105.9|angiopoietin-like 2
mm39_v1_chr1_-_33853476_33853522	0.05236199027592305	Sox2	ENSMUST00000194656.6|Zfp451|ENSMUSG00000042197.14|zinc finger protein 451
mm39_v1_chr15_-_76259126_76259141	0.05226226528135749	Sox2	ENSMUST00000071119.8|Tssk5|ENSMUSG00000060794.9|testis-specific serine kinase 5
mm39_v1_chr10_-_128885867_128885867	0.05204702277095801	Sox2	ENSMUST00000216460.2|Olfr765|ENSMUSG00000056853.4|olfactory receptor 765
mm39_v1_chr16_-_10613991_10614016	0.05180838080801004	Sox2	ENSMUST00000189593.2|Prm2|ENSMUSG00000038015.7|protamine 2
mm39_v1_chr19_+_44980565_44980575	0.051449486746790715	Sox2	ENSMUST00000179305.2|Sema4g|ENSMUSG00000025207.17|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm39_v1_chr2_-_155953783_155953863	0.05125187090105088	Sox2	ENSMUST00000154889.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000079312.10|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000153634.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000133921.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000131377.8|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000183518.2|Gm28036|ENSMUSG00000098950.8|predicted gene, 28036	ENSMUST00000184265.8|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000109607.10|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000109608.9|Cpne1|ENSMUSG00000074643.13|copine I
mm39_v1_chr9_-_57673128_57673191	0.05116441745046104	Sox2	ENSMUST00000065330.8|Clk3|ENSMUSG00000032316.9|CDC-like kinase 3
mm39_v1_chr18_+_82493237_82493281	0.05055132997212546	Sox2	ENSMUST00000091789.11|Mbp|ENSMUSG00000041607.18|myelin basic protein	ENSMUST00000114676.8|Mbp|ENSMUSG00000041607.18|myelin basic protein
mm39_v1_chr11_+_6366259_6366319	0.04993619017583339	Sox2	ENSMUST00000213200.2|Ppia|ENSMUSG00000071866.13|peptidylprolyl isomerase A
mm39_v1_chr11_-_106051533_106051686	0.049828353465198594	Sox2	ENSMUST00000106875.2|Limd2|ENSMUSG00000040699.14|LIM domain containing 2
mm39_v1_chr10_-_30531832_30531863	0.049609374122928	Sox2	ENSMUST00000217138.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7	ENSMUST00000217644.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7	ENSMUST00000216172.2|Ncoa7|ENSMUSG00000039697.17|nuclear receptor coactivator 7
mm39_v1_chr5_+_147894121_147894168	0.04960631396538043	Sox2	ENSMUST00000085558.11|Mtus2|ENSMUSG00000029651.17|microtubule associated tumor suppressor candidate 2	ENSMUST00000129092.2|Mtus2|ENSMUSG00000029651.17|microtubule associated tumor suppressor candidate 2
mm39_v1_chr12_-_76842263_76842295	0.04933709224163423	Sox2	ENSMUST00000082431.6|Gpx2|ENSMUSG00000042808.11|glutathione peroxidase 2
mm39_v1_chr6_+_53550285_53550334	0.049334965962175986	Sox2	ENSMUST00000205120.3|Creb5|ENSMUSG00000053007.10|cAMP responsive element binding protein 5
mm39_v1_chr2_-_151815759_151815886	0.04911461829849646	Sox2	ENSMUST00000109865.8|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A	ENSMUST00000109864.8|Fam110a|ENSMUSG00000027459.17|family with sequence similarity 110, member A
mm39_v1_chr5_-_142536720_142536865	0.049043181900253134	Sox2	ENSMUST00000129212.2|Radil|ENSMUSG00000029576.18|Ras association and DIL domains	ENSMUST00000110785.2|Radil|ENSMUSG00000029576.18|Ras association and DIL domains	ENSMUST00000063635.15|Radil|ENSMUSG00000029576.18|Ras association and DIL domains
mm39_v1_chr15_-_73294923_73295028	0.04890213690820433	Sox2	ENSMUST00000226848.2|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000226466.2|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000226988.3|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2
mm39_v1_chr19_-_4993060_4993155	0.0485200842270536	Sox2	ENSMUST00000133504.2|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000133254.2|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000120475.8|Peli3|ENSMUSG00000024901.16|pellino 3	ENSMUST00000025834.15|Peli3|ENSMUSG00000024901.16|pellino 3
mm39_v1_chr11_-_97466035_97466061	0.0479217682011343	Sox2	ENSMUST00000107596.9|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1	ENSMUST00000238314.2|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1	ENSMUST00000238597.2|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1	ENSMUST00000238342.2|Srcin1|ENSMUSG00000038453.18|SRC kinase signaling inhibitor 1
mm39_v1_chr7_+_5018453_5018509	0.04787587954254371	Sox2	ENSMUST00000086349.5|Zfp524|ENSMUSG00000051184.8|zinc finger protein 524	ENSMUST00000207050.2|Gm44973|ENSMUSG00000109129.2|predicted gene 44973
mm39_v1_chr8_-_71848429_71848466	0.047751242634518375	Sox2	ENSMUST00000049184.9|Ushbp1|ENSMUSG00000034911.9|USH1 protein network component harmonin binding protein 1
mm39_v1_chr3_+_19698631_19698638	0.047596014859620554	Sox2	ENSMUST00000029139.9|Trim55|ENSMUSG00000060913.7|tripartite motif-containing 55
mm39_v1_chr18_+_35860019_35860047	0.047548866065072366	Sox2	ENSMUST00000097617.3|1700066B19Rik|ENSMUSG00000073598.4|RIKEN cDNA 1700066B19 gene
mm39_v1_chr2_+_3119558_3119722	0.04743123736657124	Sox2	ENSMUST00000062934.7|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr3_+_20011201_20011237	0.04722058609105407	Sox2	ENSMUST00000091309.12|Cp|ENSMUSG00000003617.17|ceruloplasmin	ENSMUST00000108329.8|Cp|ENSMUSG00000003617.17|ceruloplasmin	ENSMUST00000003714.13|Cp|ENSMUSG00000003617.17|ceruloplasmin
mm39_v1_chr7_+_16609227_16609319	0.04701668872910213	Sox2	ENSMUST00000108493.3|Dact3|ENSMUSG00000078794.5|dishevelled-binding antagonist of beta-catenin 3
mm39_v1_chr10_+_29087658_29087701	0.046887841568824126	Sox2	ENSMUST00000213489.2|9330159F19Rik|ENSMUSG00000004360.10|RIKEN cDNA 9330159F19 gene
mm39_v1_chr2_+_31649946_31650001	0.04670722010891372	Sox2	ENSMUST00000028190.13|Abl1|ENSMUSG00000026842.17|c-abl oncogene 1, non-receptor tyrosine kinase
mm39_v1_chr15_-_79326200_79326267	0.046576054768562636	Sox2	ENSMUST00000117786.9|Csnk1e|ENSMUSG00000022433.22|casein kinase 1, epsilon	ENSMUST00000120859.9|Csnk1e|ENSMUSG00000022433.22|casein kinase 1, epsilon
mm39_v1_chr2_+_124452493_124452534	0.045931412723718236	Sox2	ENSMUST00000103239.10|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	ENSMUST00000103240.9|Sema6d|ENSMUSG00000027200.18|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm39_v1_chr18_+_37630044_37630044	0.04592804552288986	Sox2	ENSMUST00000059571.7|Pcdhb19|ENSMUSG00000043313.7|protocadherin beta 19
mm39_v1_chr4_+_106768714_106768864	0.04558557367292859	Sox2	ENSMUST00000072753.13|Ssbp3|ENSMUSG00000061887.15|single-stranded DNA binding protein 3	ENSMUST00000097934.10|Ssbp3|ENSMUSG00000061887.15|single-stranded DNA binding protein 3
mm39_v1_chr2_+_92014606_92014674	0.04540098047968554	Sox2	ENSMUST00000162146.8|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A	ENSMUST00000111292.8|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A	ENSMUST00000162497.8|Phf21a|ENSMUSG00000058318.16|PHD finger protein 21A
mm39_v1_chr7_+_4928784_4928867	0.0453898961611671	Sox2	ENSMUST00000057612.9|Ssc5d|ENSMUSG00000035279.9|scavenger receptor cysteine rich family, 5 domains
mm39_v1_chr2_-_164285097_164285114	0.04514407288658118	Sox2	ENSMUST00000017153.4|Sdc4|ENSMUSG00000017009.4|syndecan 4
mm39_v1_chr14_-_20784625_20784652	0.04487600941438577	Sox2	ENSMUST00000223679.2|Ndst2|ENSMUSG00000039308.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm39_v1_chr4_+_57637817_57637845	0.04396675565042665	Sox2	ENSMUST00000150412.4|Pakap|ENSMUSG00000089945.14|paralemmin A kinase anchor protein
mm39_v1_chr11_-_78948432_78948453	0.043930153480900985	Sox2	ENSMUST00000129463.2|Ksr1|ENSMUSG00000018334.19|kinase suppressor of ras 1
mm39_v1_chr15_+_99600149_99600196	0.043881771621659134	Sox2	ENSMUST00000229236.2|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr7_+_45890379_45890411	0.043871815699612036	Sox2	ENSMUST00000164538.2|Otog|ENSMUSG00000009487.11|otogelin
mm39_v1_chr11_+_20597149_20597156	0.043742707490758204	Sox2	ENSMUST00000109585.2|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chr11_-_76359222_76359313	0.04357889469378095	Sox2	ENSMUST00000065028.14|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr9_-_88364593_88364640	0.04355181949022668	Sox2	ENSMUST00000173801.8|Syncrip|ENSMUSG00000032423.13|synaptotagmin binding, cytoplasmic RNA interacting protein	ENSMUST00000069221.12|Syncrip|ENSMUSG00000032423.13|synaptotagmin binding, cytoplasmic RNA interacting protein	ENSMUST00000172508.2|Syncrip|ENSMUSG00000032423.13|synaptotagmin binding, cytoplasmic RNA interacting protein
mm39_v1_chr2_-_6327884_6327905	0.04342134049481931	Sox2	ENSMUST00000238876.2|1700014B07Rik|ENSMUSG00000118578.2|RIKEN cDNA 1700014B07 gene
mm39_v1_chr3_+_96737385_96737430	0.043084566933687056	Sox2	ENSMUST00000058865.14|Pdzk1|ENSMUSG00000038298.15|PDZ domain containing 1
mm39_v1_chr1_+_171238873_171238906	0.04298291392037249	Sox2	ENSMUST00000159207.8|Usf1|ENSMUSG00000026641.14|upstream transcription factor 1	ENSMUST00000161241.8|Usf1|ENSMUSG00000026641.14|upstream transcription factor 1
mm39_v1_chr10_+_23727325_23727386	0.042533813561758525	Sox2	ENSMUST00000020190.8|Vnn3|ENSMUSG00000020010.8|vanin 3
mm39_v1_chr12_-_98225676_98225718	0.04236858659431781	Sox2	ENSMUST00000021390.9|Galc|ENSMUSG00000021003.11|galactosylceramidase
mm39_v1_chr18_-_34730521_34730521	0.0422259896255419	Sox2	ENSMUST00000056932.9|Brd8dc|ENSMUSG00000049357.12|BRD8 domain containing
mm39_v1_chr7_+_5059703_5059741	0.04197172440396864	Sox2	ENSMUST00000208042.2|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106	ENSMUST00000207974.2|Ccdc106|ENSMUSG00000035228.16|coiled-coil domain containing 106
mm39_v1_chr2_+_164721277_164721318	0.04197107287753616	Sox2	ENSMUST00000041643.5|Pcif1|ENSMUSG00000039849.7|phosphorylated CTD interacting factor 1
mm39_v1_chr6_-_99643723_99643784	0.0419175067540441	Sox2	ENSMUST00000032151.3|Eif4e3|ENSMUSG00000093661.2|eukaryotic translation initiation factor 4E member 3
mm39_v1_chr1_+_153776323_153776352	0.0417110020021789	Sox2	ENSMUST00000140685.4|Glul|ENSMUSG00000026473.17|glutamate-ammonia ligase (glutamine synthetase)	ENSMUST00000139476.8|Glul|ENSMUSG00000026473.17|glutamate-ammonia ligase (glutamine synthetase)
mm39_v1_chr1_-_37535170_37535187	0.041405726900626084	Sox2	ENSMUST00000148047.2|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr16_-_10608766_10608783	0.0413651900426745	Sox2	ENSMUST00000050864.7|Prm3|ENSMUSG00000050058.7|protamine 3
mm39_v1_chr2_-_59955995_59956119	0.04114065161432192	Sox2	ENSMUST00000112550.8|Baz2b|ENSMUSG00000026987.17|bromodomain adjacent to zinc finger domain, 2B
mm39_v1_chr9_-_72019053_72019103	0.04109581744629957	Sox2	ENSMUST00000183492.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12	ENSMUST00000184523.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12	ENSMUST00000034755.13|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chr11_+_72687080_72687093	0.041060179239162234	Sox2	ENSMUST00000207107.2|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1
mm39_v1_chr5_+_30869193_30869259	0.04103902131341405	Sox2	ENSMUST00000088081.11|Dpysl5|ENSMUSG00000029168.15|dihydropyrimidinase-like 5	ENSMUST00000101442.4|Dpysl5|ENSMUSG00000029168.15|dihydropyrimidinase-like 5
mm39_v1_chr1_+_175459559_175459569	0.0409784796801797	Sox2	ENSMUST00000040250.15|Kmo|ENSMUSG00000039783.16|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm39_v1_chr18_+_20643325_20643347	0.040364981270649566	Sox2	ENSMUST00000070892.8|Dsg3|ENSMUSG00000056632.9|desmoglein 3	ENSMUST00000234945.2|Dsg3|ENSMUSG00000056632.9|desmoglein 3
mm39_v1_chr6_+_17463748_17463808	0.040035717268165204	Sox2	ENSMUST00000115443.8|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr5_-_22549688_22549708	0.039977718776054	Sox2	ENSMUST00000062372.14|Reln|ENSMUSG00000042453.15|reelin	ENSMUST00000161356.8|Reln|ENSMUSG00000042453.15|reelin
mm39_v1_chr14_-_78326435_78326471	0.03994864245934681	Sox2	ENSMUST00000118785.3|Fam216b|ENSMUSG00000045655.10|family with sequence similarity 216, member B	ENSMUST00000066437.5|Fam216b|ENSMUSG00000045655.10|family with sequence similarity 216, member B
mm39_v1_chr2_+_3119442_3119513	0.03971699189193383	Sox2	ENSMUST00000091505.11|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr11_+_3239165_3239281	0.0392876375430124	Sox2	ENSMUST00000134089.8|Patz1|ENSMUSG00000020453.18|POZ (BTB) and AT hook containing zinc finger 1
mm39_v1_chr6_+_122490534_122490542	0.03921989483947766	Sox2	ENSMUST00000032210.14|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5	ENSMUST00000148517.8|Mfap5|ENSMUSG00000030116.15|microfibrillar associated protein 5
mm39_v1_chr2_-_63014622_63014681	0.03913072992758475	Sox2	ENSMUST00000075052.10|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7	ENSMUST00000112454.8|Kcnh7|ENSMUSG00000059742.11|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm39_v1_chr11_-_120881697_120881864	0.038728244372163316	Sox2	ENSMUST00000154483.8|Csnk1d|ENSMUSG00000025162.19|casein kinase 1, delta
mm39_v1_chr18_+_65184052_65184072	0.03870226326597833	Sox2	ENSMUST00000224347.3|Nedd4l|ENSMUSG00000024589.19|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm39_v1_chr7_-_12063408_12063408	0.03868733629395336	Sox2	ENSMUST00000226701.2|Vmn1r83|ENSMUSG00000066804.4|vomeronasal 1 receptor 83
mm39_v1_chr14_-_52279916_52279916	0.03861428877944971	Sox2	ENSMUST00000052560.7|Olfr221|ENSMUSG00000044286.7|olfactory receptor 221
mm39_v1_chr11_+_104122291_104122333	0.03847551068404056	Sox2	ENSMUST00000145227.8|Mapt|ENSMUSG00000018411.18|microtubule-associated protein tau
mm39_v1_chr4_+_32238950_32238964	0.038390591740512646	Sox2	ENSMUST00000037416.13|Bach2|ENSMUSG00000040270.17|BTB and CNC homology, basic leucine zipper transcription factor 2
mm39_v1_chr6_+_86381236_86381302	0.03838769043613222	Sox2	ENSMUST00000095752.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000130967.8|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr2_+_167380112_167380130	0.03831442541693457	Sox2	ENSMUST00000052631.8|Snai1|ENSMUSG00000042821.8|snail family zinc finger 1
mm39_v1_chr2_+_3115250_3115267	0.0380470999650945	Sox2	ENSMUST00000072955.12|Fam171a1|ENSMUSG00000050530.15|family with sequence similarity 171, member A1
mm39_v1_chr3_-_95135946_95136043	0.037984965448805925	Sox2	ENSMUST00000065482.6|Mllt11|ENSMUSG00000053192.10|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11
mm39_v1_chr5_+_34153328_34153375	0.03787735159200185	Sox2	ENSMUST00000056355.9|Nat8l|ENSMUSG00000048142.10|N-acetyltransferase 8-like
mm39_v1_chr15_-_73295029_73295068	0.03785976848630664	Sox2	ENSMUST00000239146.2|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000110036.11|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2	ENSMUST00000228180.3|Ptk2|ENSMUSG00000022607.19|PTK2 protein tyrosine kinase 2
mm39_v1_chr4_+_155045372_155045387	0.03778017584885673	Sox2	ENSMUST00000049621.7|Hes5|ENSMUSG00000048001.8|hes family bHLH transcription factor 5
mm39_v1_chr16_-_31094095_31094109	0.03757718114952317	Sox2	ENSMUST00000060188.14|Ppp1r2|ENSMUSG00000047714.15|protein phosphatase 1, regulatory inhibitor subunit 2
mm39_v1_chr6_-_69521891_69521929	0.03757613372168725	Sox2	ENSMUST00000103356.4|Igkv4-57-1|ENSMUSG00000076555.4|immunoglobulin kappa variable 4-57-1
mm39_v1_chr1_-_14380327_14380348	0.03723776260843893	Sox2	ENSMUST00000080664.14|Eya1|ENSMUSG00000025932.15|EYA transcriptional coactivator and phosphatase 1
mm39_v1_chr5_+_96521814_96521814	0.03684443814958255	Sox2	ENSMUST00000036019.5|Fras1|ENSMUSG00000034687.9|Fraser extracellular matrix complex subunit 1
mm39_v1_chr4_+_155924181_155924219	0.03662635577647783	Sox2	ENSMUST00000030947.4|Mxra8|ENSMUSG00000029070.10|matrix-remodelling associated 8
mm39_v1_chr17_-_24863956_24863969	0.03652822265669179	Sox2	ENSMUST00000019684.13|Slc9a3r2|ENSMUSG00000002504.16|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm39_v1_chr5_-_38316706_38316798	0.0364279236235801	Sox2	ENSMUST00000201341.2|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1	ENSMUST00000201363.4|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1	ENSMUST00000201134.2|Nsg1|ENSMUSG00000029126.8|neuron specific gene family member 1
mm39_v1_chr11_+_69523754_69523832	0.03638593464180959	Sox2	ENSMUST00000018909.4|Fxr2|ENSMUSG00000018765.6|fragile X mental retardation, autosomal homolog 2
mm39_v1_chr4_-_155013002_155013030	0.03614213786218986	Sox2	ENSMUST00000152687.8|Tnfrsf14|ENSMUSG00000042333.17|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	ENSMUST00000137803.8|Tnfrsf14|ENSMUSG00000042333.17|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	ENSMUST00000145296.2|Tnfrsf14|ENSMUSG00000042333.17|tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)
mm39_v1_chr1_+_17797257_17797312	0.035960093678832614	Sox2	ENSMUST00000159958.8|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1	ENSMUST00000160305.8|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1	ENSMUST00000095075.5|Crispld1|ENSMUSG00000025776.14|cysteine-rich secretory protein LCCL domain containing 1
mm39_v1_chr9_-_105372330_105372344	0.03580292295393924	Sox2	ENSMUST00000038118.15|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering
mm39_v1_chr7_+_106692427_106692427	0.035716029036615894	Sox2	ENSMUST00000210568.4|Olfr17|ENSMUSG00000073897.6|olfactory receptor 17
mm39_v1_chr6_+_22875494_22875511	0.03551786636072317	Sox2	ENSMUST00000090568.7|Ptprz1|ENSMUSG00000068748.8|protein tyrosine phosphatase, receptor type Z, polypeptide 1
mm39_v1_chr4_-_63518986_63519006	0.03481899219547299	Sox2	ENSMUST00000210529.2|Gm11213|ENSMUSG00000084782.3|predicted gene 11213
mm39_v1_chr11_-_120472379_120472452	0.034661641176693604	Sox2	ENSMUST00000106197.10|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr4_+_114914607_114914635	0.03463235180832225	Sox2	ENSMUST00000136946.8|Tal1|ENSMUSG00000028717.13|T cell acute lymphocytic leukemia 1
mm39_v1_chr18_+_12874390_12874413	0.034554488846453256	Sox2	ENSMUST00000121018.8|Cabyr|ENSMUSG00000024430.15|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)	ENSMUST00000119108.8|Cabyr|ENSMUSG00000024430.15|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)	ENSMUST00000186263.2|Cabyr|ENSMUSG00000024430.15|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)	ENSMUST00000191078.7|Cabyr|ENSMUSG00000024430.15|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
mm39_v1_chr12_-_110945376_110945390	0.03440930941502052	Sox2	ENSMUST00000142012.2|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr15_-_65848649_65848655	0.034212103269284706	Sox2	ENSMUST00000239034.2|Hhla1|ENSMUSG00000072511.4|HERV-H LTR-associating 1	ENSMUST00000100584.3|Hhla1|ENSMUSG00000072511.4|HERV-H LTR-associating 1
mm39_v1_chr10_-_61946724_61946839	0.034013069369456375	Sox2	ENSMUST00000142821.8|Fam241b|ENSMUSG00000020083.14|family with sequence similarity 241, member B	ENSMUST00000124615.8|Fam241b|ENSMUSG00000020083.14|family with sequence similarity 241, member B	ENSMUST00000064050.5|Fam241b|ENSMUSG00000020083.14|family with sequence similarity 241, member B	ENSMUST00000125704.8|Fam241b|ENSMUSG00000020083.14|family with sequence similarity 241, member B	ENSMUST00000142796.8|Fam241b|ENSMUSG00000020083.14|family with sequence similarity 241, member B
mm39_v1_chr1_+_74448535_74448558	0.03389937352033885	Sox2	ENSMUST00000027366.13|Vil1|ENSMUSG00000026175.13|villin 1
mm39_v1_chrX_-_104973003_104973014	0.033444499971734654	Sox2	ENSMUST00000130980.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000113573.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr2_-_179618439_179618458	0.033026984792530606	Sox2	ENSMUST00000041618.13|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4	ENSMUST00000227325.2|Taf4|ENSMUSG00000039117.17|TATA-box binding protein associated factor 4
mm39_v1_chr9_+_108269992_108270011	0.03277238821486535	Sox2	ENSMUST00000192995.6|1700102P08Rik|ENSMUSG00000032611.10|RIKEN cDNA 1700102P08 gene
mm39_v1_chr5_-_134944366_134944399	0.03254377511118765	Sox2	ENSMUST00000008987.5|Cldn13|ENSMUSG00000008843.5|claudin 13
mm39_v1_chr7_+_6386294_6386357	0.032530446246088765	Sox2	ENSMUST00000081022.9|Zfp28|ENSMUSG00000062861.9|zinc finger protein 28
mm39_v1_chr17_-_79328157_79328246	0.03248772687068639	Sox2	ENSMUST00000168887.8|Prkd3|ENSMUSG00000024070.16|protein kinase D3	ENSMUST00000119284.8|Prkd3|ENSMUSG00000024070.16|protein kinase D3
mm39_v1_chr2_-_79287095_79287102	0.032328887584287	Sox2	ENSMUST00000041099.5|Neurod1|ENSMUSG00000034701.10|neurogenic differentiation 1
mm39_v1_chr8_+_70261323_70261392	0.032326374400196325	Sox2	ENSMUST00000036074.15|Gmip|ENSMUSG00000036246.15|Gem-interacting protein	ENSMUST00000123453.2|Gmip|ENSMUSG00000036246.15|Gem-interacting protein
mm39_v1_chr4_-_126861918_126861947	0.032297146448979366	Sox2	ENSMUST00000106108.9|Zmym4|ENSMUSG00000042446.17|zinc finger, MYM-type 4
mm39_v1_chr10_+_111919250_111919276	0.0322672317760496	Sox2	ENSMUST00000148897.8|Glipr1l2|ENSMUSG00000020214.11|GLI pathogenesis-related 1 like 2	ENSMUST00000020434.4|Glipr1l2|ENSMUSG00000020214.11|GLI pathogenesis-related 1 like 2
mm39_v1_chr19_-_5944098_5944177	0.03219826907784453	Sox2	ENSMUST00000055911.6|Tigd3|ENSMUSG00000044390.6|tigger transposable element derived 3	ENSMUST00000236767.2|Tigd3|ENSMUSG00000044390.6|tigger transposable element derived 3
mm39_v1_chr4_+_40723083_40723117	0.03215329199572209	Sox2	ENSMUST00000149794.2|Dnaja1|ENSMUSG00000028410.14|DnaJ heat shock protein family (Hsp40) member A1
mm39_v1_chr11_+_45871135_45871164	0.03214863326459672	Sox2	ENSMUST00000049038.4|Sox30|ENSMUSG00000040489.6|SRY (sex determining region Y)-box 30
mm39_v1_chr10_+_128139227_128139287	0.031550212824539306	Sox2	ENSMUST00000218315.2|Pan2|ENSMUSG00000005682.10|PAN2 poly(A) specific ribonuclease subunit	ENSMUST00000219721.2|Pan2|ENSMUSG00000005682.10|PAN2 poly(A) specific ribonuclease subunit
mm39_v1_chr1_-_119765343_119765403	0.03128899150069373	Sox2	ENSMUST00000064091.12|Ptpn4|ENSMUSG00000026384.14|protein tyrosine phosphatase, non-receptor type 4
mm39_v1_chr17_-_43978023_43978055	0.030962364059652463	Sox2	ENSMUST00000233442.2|Slc25a27|ENSMUSG00000023912.11|solute carrier family 25, member 27
mm39_v1_chr1_+_9671388_9671481	0.030882531744651852	Sox2	ENSMUST00000088666.4|Vxn|ENSMUSG00000067879.4|vexin
mm39_v1_chr5_-_18040647_18040709	0.030689996420341568	Sox2	ENSMUST00000082367.13|Cd36|ENSMUSG00000002944.16|CD36 molecule
mm39_v1_chr4_-_140376047_140376093	0.030684227365838486	Sox2	ENSMUST00000105799.8|Arhgef10l|ENSMUSG00000040964.17|Rho guanine nucleotide exchange factor (GEF) 10-like	ENSMUST00000039204.10|Arhgef10l|ENSMUSG00000040964.17|Rho guanine nucleotide exchange factor (GEF) 10-like	ENSMUST00000097820.9|Arhgef10l|ENSMUSG00000040964.17|Rho guanine nucleotide exchange factor (GEF) 10-like
mm39_v1_chr5_-_109340065_109340065	0.03057380049490222	Sox2	ENSMUST00000053253.10|Vmn2r13|ENSMUSG00000091635.3|vomeronasal 2, receptor 13
mm39_v1_chr9_-_57528043_57528060	0.03046496870399284	Sox2	ENSMUST00000093832.11|Lman1l|ENSMUSG00000056271.14|lectin, mannose-binding 1 like
mm39_v1_chr6_+_54658609_54658770	0.03034334993177698	Sox2	ENSMUST00000190641.7|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)	ENSMUST00000187701.2|Mturn|ENSMUSG00000038065.14|maturin, neural progenitor differentiation regulator homolog (Xenopus)
mm39_v1_chr11_-_98220466_98220482	0.030321458156646938	Sox2	ENSMUST00000041685.7|Neurod2|ENSMUSG00000038255.7|neurogenic differentiation 2
mm39_v1_chrX_-_47966588_47966591	0.030197663032199822	Sox2	ENSMUST00000114928.2|Fsip2l|ENSMUSG00000079606.2|fibrous sheath-interacting protein 2-like
mm39_v1_chr7_-_142215027_142215050	0.029929041206280795	Sox2	ENSMUST00000105936.8|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr7_+_120581744_120581807	0.029902328074081774	Sox2	ENSMUST00000149535.2|Mfsd13b|ENSMUSG00000030877.12|major facilitator superfamily domain containing 13B	ENSMUST00000138177.2|Mfsd13b|ENSMUSG00000030877.12|major facilitator superfamily domain containing 13B	ENSMUST00000216241.2|Mfsd13b|ENSMUSG00000030877.12|major facilitator superfamily domain containing 13B
mm39_v1_chr6_-_69835868_69835916	0.02987137086811319	Sox2	ENSMUST00000103369.2|Igkv12-41|ENSMUSG00000095007.2|immunoglobulin kappa chain variable 12-41
mm39_v1_chr5_-_137870001_137870030	0.029756994685116646	Sox2	ENSMUST00000164886.2|Pilrb2|ENSMUSG00000066682.12|paired immunoglobin-like type 2 receptor beta 2
mm39_v1_chr2_-_148717543_148717612	0.029363421645610264	Sox2	ENSMUST00000144845.2|Cst3|ENSMUSG00000027447.7|cystatin C
mm39_v1_chr13_+_49646794_49646794	0.02935940528547109	Sox2	ENSMUST00000222404.2|Tes3-ps|ENSMUSG00000113255.2|testis derived transcript 3, pseudogene
mm39_v1_chr11_-_86999481_86999545	0.029338168548190494	Sox2	ENSMUST00000051395.9|Prr11|ENSMUSG00000020493.9|proline rich 11
mm39_v1_chrX_+_135723531_135723548	0.02931443353640537	Sox2	ENSMUST00000113085.2|Plp1|ENSMUSG00000031425.16|proteolipid protein (myelin) 1
mm39_v1_chr7_+_43079512_43079538	0.02930028672430052	Sox2	ENSMUST00000004732.7|Lim2|ENSMUSG00000118560.2|lens intrinsic membrane protein 2
mm39_v1_chr11_+_31915542_31915599	0.029096360972648148	Sox2	ENSMUST00000102829.4|4930524B15Rik|ENSMUSG00000020299.7|RIKEN cDNA 4930524B15 gene
mm39_v1_chr6_-_51989456_51989531	0.029087196273130115	Sox2	ENSMUST00000078214.8|Skap2|ENSMUSG00000059182.9|src family associated phosphoprotein 2	ENSMUST00000204778.3|Skap2|ENSMUSG00000059182.9|src family associated phosphoprotein 2
mm39_v1_chr11_-_86964881_86964943	0.028842644277311865	Sox2	ENSMUST00000020804.8|Gdpd1|ENSMUSG00000061666.7|glycerophosphodiester phosphodiesterase domain containing 1
mm39_v1_chr4_+_118725980_118725980	0.028635617100600946	Sox2	ENSMUST00000094831.2|Olfr1331|ENSMUSG00000073769.5|olfactory receptor 1331
mm39_v1_chr1_+_75523092_75523158	0.028556174272564384	Sox2	ENSMUST00000150142.8|Slc4a3|ENSMUSG00000006576.17|solute carrier family 4 (anion exchanger), member 3
mm39_v1_chr4_-_152402915_152403111	0.028544715955116637	Sox2	ENSMUST00000170820.3|Rnf207|ENSMUSG00000058498.13|ring finger protein 207	ENSMUST00000076183.12|Rnf207|ENSMUSG00000058498.13|ring finger protein 207
mm39_v1_chr14_-_34032450_34032517	0.028383277340490776	Sox2	ENSMUST00000227375.2|Shld2|ENSMUSG00000041471.10|shieldin complex subunit 2
mm39_v1_chr11_+_43419586_43419623	0.02836241051162895	Sox2	ENSMUST00000050574.7|Ccnjl|ENSMUSG00000044707.8|cyclin J-like
mm39_v1_chr9_-_75518387_75518464	0.02815696099937937	Sox2	ENSMUST00000215462.2|Tmod2|ENSMUSG00000032186.16|tropomodulin 2	ENSMUST00000217233.2|Tmod2|ENSMUSG00000032186.16|tropomodulin 2	ENSMUST00000215614.2|Tmod2|ENSMUSG00000032186.16|tropomodulin 2
mm39_v1_chr11_-_69712970_69713006	0.027941566423451646	Sox2	ENSMUST00000045771.7|Spem1|ENSMUSG00000041165.7|sperm maturation 1
mm39_v1_chr6_-_116605914_116605965	0.027638816317971198	Sox2	ENSMUST00000079749.6|Zfp422|ENSMUSG00000059878.13|zinc finger protein 422
mm39_v1_chr5_+_92831150_92831294	0.02745519568991016	Sox2	ENSMUST00000113055.9|Shroom3|ENSMUSG00000029381.17|shroom family member 3
mm39_v1_chr16_-_34334314_34334427	0.02724542486523611	Sox2	ENSMUST00000151491.8|Kalrn|ENSMUSG00000061751.17|kalirin, RhoGEF kinase	ENSMUST00000114960.9|Kalrn|ENSMUSG00000061751.17|kalirin, RhoGEF kinase
mm39_v1_chr15_+_99599978_99600010	0.027039484822890154	Sox2	ENSMUST00000023759.6|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr13_-_46881388_46881482	0.02700569109979116	Sox2	ENSMUST00000021803.10|Nup153|ENSMUSG00000021374.11|nucleoporin 153
mm39_v1_chr3_-_94343874_94343944	0.02698707543046691	Sox2	ENSMUST00000204913.3|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3	ENSMUST00000191506.8|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3	ENSMUST00000199678.4|Oaz3|ENSMUSG00000028141.13|ornithine decarboxylase antizyme 3
mm39_v1_chr12_+_8724391_8724423	0.02688330720703628	Sox2	ENSMUST00000163569.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2
mm39_v1_chr7_-_45463701_45463745	0.02683839416325874	Sox2	ENSMUST00000210898.2|Cyth2|ENSMUSG00000003269.18|cytohesin 2	ENSMUST00000107729.10|Cyth2|ENSMUSG00000003269.18|cytohesin 2	ENSMUST00000056820.13|Cyth2|ENSMUSG00000003269.18|cytohesin 2
mm39_v1_chr12_-_98703664_98703774	0.02674850339193789	Sox2	ENSMUST00000170188.8|Ptpn21|ENSMUSG00000021009.16|protein tyrosine phosphatase, non-receptor type 21
mm39_v1_chr18_+_74401246_74401279	0.026433453061675185	Sox2	ENSMUST00000239157.2|Mbd1|ENSMUSG00000024561.12|methyl-CpG binding domain protein 1	ENSMUST00000097530.5|Mbd1|ENSMUSG00000024561.12|methyl-CpG binding domain protein 1
mm39_v1_chrX_-_104972844_104972927	0.026375887600916276	Sox2	ENSMUST00000198441.5|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000137453.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr18_+_74401322_74401448	0.02631337328511937	Sox2	ENSMUST00000224047.2|Mbd1|ENSMUSG00000024561.12|methyl-CpG binding domain protein 1
mm39_v1_chr6_+_51409657_51409763	0.026302522792795296	Sox2	ENSMUST00000160133.2|Nfe2l3|ENSMUSG00000029832.17|nuclear factor, erythroid derived 2, like 3
mm39_v1_chr11_-_76462353_76462385	0.026050116877766722	Sox2	ENSMUST00000072740.13|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr6_-_83098255_83098540	0.026018320072860687	Sox2	ENSMUST00000205023.2|Wbp1|ENSMUSG00000030035.15|WW domain binding protein 1	ENSMUST00000146328.4|Wbp1|ENSMUSG00000030035.15|WW domain binding protein 1	ENSMUST00000151393.7|Wbp1|ENSMUSG00000030035.15|WW domain binding protein 1	ENSMUST00000032111.11|Wbp1|ENSMUSG00000030035.15|WW domain binding protein 1	ENSMUST00000113936.10|Wbp1|ENSMUSG00000030035.15|WW domain binding protein 1
mm39_v1_chr8_+_91681898_91682043	0.025962398585225123	Sox2	ENSMUST00000209746.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chr2_+_163280375_163280456	0.025667608615503865	Sox2	ENSMUST00000109420.10|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000109421.10|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000018087.13|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1	ENSMUST00000137070.2|Gdap1l1|ENSMUSG00000017943.16|ganglioside-induced differentiation-associated protein 1-like 1
mm39_v1_chr7_-_26385862_26385862	0.02555011048348122	Sox2	ENSMUST00000077356.7|Cyp2b23|ENSMUSG00000040650.9|cytochrome P450, family 2, subfamily b, polypeptide 23
mm39_v1_chr1_+_191058109_191058181	0.025524383356215975	Sox2	ENSMUST00000027940.6|Pacc1|ENSMUSG00000026627.8|proton activated chloride channel 1
mm39_v1_chr1_+_6285082_6285232	0.025480178934136517	Sox2	ENSMUST00000160062.8|Rb1cc1|ENSMUSG00000025907.15|RB1-inducible coiled-coil 1
mm39_v1_chr14_+_54032814_54032814	0.025435067248336666	Sox2	ENSMUST00000103671.4|Trav13-5|ENSMUSG00000087666.4|T cell receptor alpha variable 13-5
mm39_v1_chr18_+_84738144_84738367	0.025111331771907254	Sox2	ENSMUST00000161429.3|Dipk1c|ENSMUSG00000047992.12|divergent protein kinase domain 1C	ENSMUST00000052501.8|Dipk1c|ENSMUSG00000047992.12|divergent protein kinase domain 1C
mm39_v1_chr2_-_89084406_89084406	0.0250349347995592	Sox2	ENSMUST00000215447.2|Olfr1228|ENSMUSG00000099486.4|olfactory receptor 1228
mm39_v1_chr1_-_189901596_189901723	0.024988864798961702	Sox2	ENSMUST00000010319.14|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr12_+_29988035_29988058	0.024583821809388843	Sox2	ENSMUST00000122328.8|Pxdn|ENSMUSG00000020674.18|peroxidasin	ENSMUST00000118321.3|Pxdn|ENSMUSG00000020674.18|peroxidasin
mm39_v1_chr1_+_91729175_91729210	0.024429435815426375	Sox2	ENSMUST00000007949.4|Twist2|ENSMUSG00000007805.5|twist basic helix-loop-helix transcription factor 2	ENSMUST00000186075.2|Twist2|ENSMUSG00000007805.5|twist basic helix-loop-helix transcription factor 2
mm39_v1_chr11_-_113600838_113600849	0.02405285460462036	Sox2	ENSMUST00000018871.8|Cpsf4l|ENSMUSG00000018727.20|cleavage and polyadenylation specific factor 4-like
mm39_v1_chr11_+_53348032_53348128	0.024016024430384114	Sox2	ENSMUST00000109013.9|Shroom1|ENSMUSG00000018387.13|shroom family member 1	ENSMUST00000018531.12|Shroom1|ENSMUSG00000018387.13|shroom family member 1	ENSMUST00000093114.5|Shroom1|ENSMUSG00000018387.13|shroom family member 1
mm39_v1_chr11_+_59995878_59996003	0.023960539307898862	Sox2	ENSMUST00000132012.2|Rai1|ENSMUSG00000062115.16|retinoic acid induced 1
mm39_v1_chr12_+_70200898_70200932	0.023769483003891926	Sox2	ENSMUST00000182927.8|Abhd12b|ENSMUSG00000090121.11|abhydrolase domain containing 12B	ENSMUST00000169156.3|Abhd12b|ENSMUSG00000090121.11|abhydrolase domain containing 12B
mm39_v1_chr10_-_82459024_82459088	0.023612536503048925	Sox2	ENSMUST00000183363.2|1190007I07Rik|ENSMUSG00000063320.12|RIKEN cDNA 1190007I07 gene	ENSMUST00000079648.12|1190007I07Rik|ENSMUSG00000063320.12|RIKEN cDNA 1190007I07 gene	ENSMUST00000185168.8|1190007I07Rik|ENSMUSG00000063320.12|RIKEN cDNA 1190007I07 gene
mm39_v1_chr6_+_15184630_15184661	0.02324030036122534	Sox2	ENSMUST00000115470.3|Foxp2|ENSMUSG00000029563.17|forkhead box P2
mm39_v1_chr11_+_114741948_114741999	0.023230683910692235	Sox2	ENSMUST00000133245.2|Gprc5c|ENSMUSG00000051043.17|G protein-coupled receptor, family C, group 5, member C	ENSMUST00000122967.3|Gprc5c|ENSMUSG00000051043.17|G protein-coupled receptor, family C, group 5, member C
mm39_v1_chr14_-_33169099_33169138	0.023157793763777836	Sox2	ENSMUST00000111944.10|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000022504.12|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8	ENSMUST00000111945.9|Mapk8|ENSMUSG00000021936.15|mitogen-activated protein kinase 8
mm39_v1_chr1_+_190769010_190769021	0.02294112852940418	Sox2	ENSMUST00000077889.8|Spata45|ENSMUSG00000057072.12|spermatogenesis associated 45
mm39_v1_chr3_-_127631068_127631172	0.022811572576144874	Sox2	ENSMUST00000051737.8|Ap1ar|ENSMUSG00000074238.7|adaptor-related protein complex 1 associated regulatory protein	ENSMUST00000200409.5|Ap1ar|ENSMUSG00000074238.7|adaptor-related protein complex 1 associated regulatory protein
mm39_v1_chr7_-_89166781_89166796	0.022301914169672164	Sox2	ENSMUST00000041761.7|Prss23|ENSMUSG00000039405.8|protease, serine 23
mm39_v1_chr9_-_103639018_103639046	0.022124233073744046	Sox2	ENSMUST00000215136.2|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108	ENSMUST00000189588.7|Tmem108|ENSMUSG00000042757.17|transmembrane protein 108
mm39_v1_chr10_+_40225272_40225385	0.022083862867825946	Sox2	ENSMUST00000044672.11|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19	ENSMUST00000095743.4|Cdk19|ENSMUSG00000038481.14|cyclin-dependent kinase 19
mm39_v1_chr12_+_71356632_71356758	0.021945050613452866	Sox2	ENSMUST00000061273.12|Dact1|ENSMUSG00000044548.12|dishevelled-binding antagonist of beta-catenin 1	ENSMUST00000150639.2|Dact1|ENSMUSG00000044548.12|dishevelled-binding antagonist of beta-catenin 1
mm39_v1_chr14_-_56809287_56809317	0.02171163640204712	Sox2	ENSMUST00000065302.8|Cenpj|ENSMUSG00000064128.9|centromere protein J
mm39_v1_chr1_+_75522902_75522957	0.02168631990534895	Sox2	ENSMUST00000124341.8|Slc4a3|ENSMUSG00000006576.17|solute carrier family 4 (anion exchanger), member 3
mm39_v1_chr11_+_119205613_119205685	0.021583934339972115	Sox2	ENSMUST00000053245.7|Card14|ENSMUSG00000013483.15|caspase recruitment domain family, member 14
mm39_v1_chr11_+_50248586_50248600	0.021556378300265702	Sox2	ENSMUST00000052596.3|Cby3|ENSMUSG00000050087.4|chibby family member 3
mm39_v1_chr14_-_58127639_58127696	0.021468932220961405	Sox2	ENSMUST00000226057.2|Zdhhc20|ENSMUSG00000021969.9|zinc finger, DHHC domain containing 20
mm39_v1_chr17_+_66090336_66090594	0.02101511192902463	Sox2	ENSMUST00000073104.11|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000160664.8|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000162272.2|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1
mm39_v1_chr10_+_128139191_128139221	0.020100163699366198	Sox2	ENSMUST00000005825.8|Pan2|ENSMUSG00000005682.10|PAN2 poly(A) specific ribonuclease subunit
mm39_v1_chr16_+_16888084_16888102	0.02009417616981777	Sox2	ENSMUST00000231514.2|Ypel1|ENSMUSG00000022773.20|yippee like 1
mm39_v1_chr6_-_94260806_94260920	0.02007485409110111	Sox2	ENSMUST00000203519.3|Magi1|ENSMUSG00000045095.17|membrane associated guanylate kinase, WW and PDZ domain containing 1	ENSMUST00000204347.3|Magi1|ENSMUSG00000045095.17|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm39_v1_chr15_+_75468473_75468492	0.01997378642616571	Sox2	ENSMUST00000189944.7|Gpihbp1|ENSMUSG00000022579.11|GPI-anchored HDL-binding protein 1	ENSMUST00000023243.11|Gpihbp1|ENSMUSG00000022579.11|GPI-anchored HDL-binding protein 1
mm39_v1_chr3_+_89122477_89122489	0.01997140066728177	Sox2	ENSMUST00000029682.11|Thbs3|ENSMUSG00000028047.12|thrombospondin 3
mm39_v1_chr5_-_28672091_28672254	0.019942897318451773	Sox2	ENSMUST00000002708.5|Shh|ENSMUSG00000002633.5|sonic hedgehog
mm39_v1_chr8_-_36716445_36716670	0.019889659315388924	Sox2	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr7_+_143729250_143729266	0.01986372054643519	Sox2	ENSMUST00000105900.9|Shank2|ENSMUSG00000037541.23|SH3 and multiple ankyrin repeat domains 2
mm39_v1_chr14_-_54647647_54647675	0.019587444172494257	Sox2	ENSMUST00000228488.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	ENSMUST00000195970.5|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr2_-_89084074_89084074	0.019148366050068002	Sox2	ENSMUST00000216392.2|Olfr1228|ENSMUSG00000099486.4|olfactory receptor 1228
mm39_v1_chr8_+_95703506_95703621	0.01904462855125585	Sox2	ENSMUST00000212581.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr2_-_181340226_181340241	0.018695624083290584	Sox2	ENSMUST00000052416.4|Lkaaear1|ENSMUSG00000045794.4|LKAAEAR motif containing 1 (IKAAEAR murine motif)
mm39_v1_chr15_-_98851423_98851441	0.018675933793007124	Sox2	ENSMUST00000134214.3|Gm49450|ENSMUSG00000116358.2|predicted gene, 49450
mm39_v1_chr5_-_136273691_136273780	0.018294616121655553	Sox2	ENSMUST00000196447.2|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2	ENSMUST00000196397.5|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2	ENSMUST00000005188.14|Sh2b2|ENSMUSG00000005057.14|SH2B adaptor protein 2
mm39_v1_chr1_+_36753607_36753656	0.018291793043058398	Sox2	ENSMUST00000208994.2|4933424G06Rik|ENSMUSG00000102416.5|RIKEN cDNA 4933424G06 gene
mm39_v1_chr2_+_131333866_131333913	0.01813349178518917	Sox2	ENSMUST00000110181.8|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110180.2|Smox|ENSMUSG00000027333.19|spermine oxidase
mm39_v1_chr7_-_28879879_28880126	0.018126360484726375	Sox2	ENSMUST00000209034.2|Psmd8|ENSMUSG00000030591.18|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	ENSMUST00000182328.8|Psmd8|ENSMUSG00000030591.18|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	ENSMUST00000186182.2|Psmd8|ENSMUSG00000030591.18|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	ENSMUST00000059642.17|Psmd8|ENSMUSG00000030591.18|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm39_v1_chr10_-_81102740_81102770	0.01809796963816483	Sox2	ENSMUST00000046114.5|Mrpl54|ENSMUSG00000034932.5|mitochondrial ribosomal protein L54
mm39_v1_chr14_+_7030760_7030788	0.017971202027664886	Sox2	ENSMUST00000055211.6|Lrrc3b|ENSMUSG00000045201.7|leucine rich repeat containing 3B
mm39_v1_chr4_+_117706559_117706572	0.017930519482707453	Sox2	ENSMUST00000163288.2|Slc6a9|ENSMUSG00000028542.18|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm39_v1_chr11_-_78056347_78056415	0.01783939820737321	Sox2	ENSMUST00000017530.4|Traf4|ENSMUSG00000017386.11|TNF receptor associated factor 4
mm39_v1_chr14_+_34097422_34097456	0.01766556756563888	Sox2	ENSMUST00000111908.3|Mmrn2|ENSMUSG00000041445.10|multimerin 2
mm39_v1_chr12_-_16850887_16850933	0.017433596975670408	Sox2	ENSMUST00000161998.3|Greb1|ENSMUSG00000036523.17|gene regulated by estrogen in breast cancer protein
mm39_v1_chr17_+_8559230_8559282	0.017274213162091337	Sox2	ENSMUST00000069742.8|Prr18|ENSMUSG00000055945.9|proline rich 18
mm39_v1_chr18_-_46444804_46444918	0.01712810715978045	Sox2	ENSMUST00000236934.2|Ccdc112|ENSMUSG00000071855.6|coiled-coil domain containing 112
mm39_v1_chr7_-_4973960_4973960	0.01712403601912845	Sox2	ENSMUST00000144863.8|Sbk3|ENSMUSG00000085272.8|SH3 domain binding kinase family, member 3
mm39_v1_chr7_-_109271171_109271293	0.01710887644536859	Sox2	ENSMUST00000208734.2|Denn2b|ENSMUSG00000031024.14|DENN domain containing 2B
mm39_v1_chr6_-_138398376_138398450	0.01697176889656711	Sox2	ENSMUST00000163065.8|Lmo3|ENSMUSG00000030226.13|LIM domain only 3
mm39_v1_chr9_+_20940669_20940751	0.01692574318102896	Sox2	ENSMUST00000001040.7|Icam4|ENSMUSG00000001014.7|intercellular adhesion molecule 4, Landsteiner-Wiener blood group	ENSMUST00000215077.2|Icam4|ENSMUSG00000001014.7|intercellular adhesion molecule 4, Landsteiner-Wiener blood group
mm39_v1_chr1_-_36597430_36597446	0.016770674452162092	Sox2	ENSMUST00000191677.6|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C	ENSMUST00000114991.8|Sema4c|ENSMUSG00000026121.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm39_v1_chr3_+_16237371_16237447	0.016355071906629222	Sox2	ENSMUST00000108345.9|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000191774.6|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3	ENSMUST00000108346.5|Ythdf3|ENSMUSG00000047213.15|YTH N6-methyladenosine RNA binding protein 3
mm39_v1_chr7_+_64151838_64151903	0.01620584981162951	Sox2	ENSMUST00000205604.2|Apba2|ENSMUSG00000030519.15|amyloid beta (A4) precursor protein-binding, family A, member 2
mm39_v1_chr2_-_20973337_20973436	0.01613275005412391	Sox2	ENSMUST00000141298.9|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21	ENSMUST00000125783.3|Arhgap21|ENSMUSG00000036591.17|Rho GTPase activating protein 21
mm39_v1_chr13_-_99584091_99584153	0.01597340679050004	Sox2	ENSMUST00000223725.2|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr8_+_96078886_96078957	0.01595663034316161	Sox2	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr2_-_73605684_73605723	0.015872106611735794	Sox2	ENSMUST00000112024.10|Chn1|ENSMUSG00000056486.19|chimerin 1	ENSMUST00000180045.8|Chn1|ENSMUSG00000056486.19|chimerin 1
mm39_v1_chr9_+_37313193_37313277	0.015805941813834604	Sox2	ENSMUST00000214185.3|Robo4|ENSMUSG00000032125.22|roundabout guidance receptor 4
mm39_v1_chr1_+_92524243_92524243	0.015308360405064836	Sox2	ENSMUST00000073748.4|Olfr1411|ENSMUSG00000062497.4|olfactory receptor 1411
mm39_v1_chr4_+_141171965_141172025	0.01529065916077315	Sox2	ENSMUST00000006377.13|Zbtb17|ENSMUSG00000006215.13|zinc finger and BTB domain containing 17
mm39_v1_chr17_-_34834745_34834784	0.015152307119249642	Sox2	ENSMUST00000168353.4|Egfl8|ENSMUSG00000015467.15|EGF-like domain 8
mm39_v1_chr2_+_37333275_37333371	0.014943071581792472	Sox2	ENSMUST00000133434.8|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1	ENSMUST00000061179.12|Rabgap1|ENSMUSG00000035437.16|RAB GTPase activating protein 1
mm39_v1_chr15_-_98155173_98155193	0.014773961903762737	Sox2	ENSMUST00000060855.7|H1f7|ENSMUSG00000048077.7|H1.7 linker histone
mm39_v1_chr15_+_76130947_76131006	0.014737343637365433	Sox2	ENSMUST00000229772.2|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	ENSMUST00000230347.2|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	ENSMUST00000023225.8|Grina|ENSMUSG00000022564.8|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
mm39_v1_chr2_-_155953874_155953898	0.01453974637822081	Sox2	ENSMUST00000059647.12|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000109604.9|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000142960.9|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000138068.2|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12	ENSMUST00000136296.9|Cpne1|ENSMUSG00000074643.13|copine I	ENSMUST00000128499.2|Rbm12|ENSMUSG00000089824.11|RNA binding motif protein 12
mm39_v1_chr18_-_74197970_74198040	0.014180431528984143	Sox2	ENSMUST00000159162.2|Mapk4|ENSMUSG00000024558.13|mitogen-activated protein kinase 4	ENSMUST00000091851.10|Mapk4|ENSMUSG00000024558.13|mitogen-activated protein kinase 4
mm39_v1_chr10_-_89270554_89270640	0.014178624601670832	Sox2	ENSMUST00000220071.2|Gas2l3|ENSMUSG00000074802.12|growth arrest-specific 2 like 3
mm39_v1_chr9_+_90045109_90045174	0.014157819471310944	Sox2	ENSMUST00000113059.8|Adamts7|ENSMUSG00000032363.16|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	ENSMUST00000167122.8|Adamts7|ENSMUSG00000032363.16|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
mm39_v1_chr8_+_26008799_26008817	0.014150062872134666	Sox2	ENSMUST00000119398.10|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000117179.9|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1
mm39_v1_chr1_-_173195236_173195261	0.014013381425901358	Sox2	ENSMUST00000005470.5|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3	ENSMUST00000111220.8|Cadm3|ENSMUSG00000005338.15|cell adhesion molecule 3
mm39_v1_chr8_-_120567236_120567288	0.013907661704113485	Sox2	ENSMUST00000211873.2|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)	ENSMUST00000168698.2|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)	ENSMUST00000034285.14|Cotl1|ENSMUSG00000031827.14|coactosin-like 1 (Dictyostelium)
mm39_v1_chr4_+_140970161_140970221	0.01388277665470037	Sox2	ENSMUST00000138096.8|Arhgef19|ENSMUSG00000028919.12|Rho guanine nucleotide exchange factor (GEF) 19	ENSMUST00000006618.9|Arhgef19|ENSMUSG00000028919.12|Rho guanine nucleotide exchange factor (GEF) 19	ENSMUST00000125392.8|Arhgef19|ENSMUSG00000028919.12|Rho guanine nucleotide exchange factor (GEF) 19
mm39_v1_chr10_-_89270527_89270553	0.013874444623586904	Sox2	ENSMUST00000218764.2|Gas2l3|ENSMUSG00000074802.12|growth arrest-specific 2 like 3
mm39_v1_chr15_+_75468494_75468511	0.012874638621294931	Sox2	ENSMUST00000189874.2|Gpihbp1|ENSMUSG00000022579.11|GPI-anchored HDL-binding protein 1
mm39_v1_chr9_+_108270020_108270042	0.012721592971562223	Sox2	ENSMUST00000035234.6|1700102P08Rik|ENSMUSG00000032611.10|RIKEN cDNA 1700102P08 gene
mm39_v1_chr7_-_109585457_109585513	0.012629316910533752	Sox2	ENSMUST00000119929.8|Tmem41b|ENSMUSG00000047554.15|transmembrane protein 41B
mm39_v1_chr7_-_98010478_98010531	0.0124945656225154	Sox2	ENSMUST00000094161.11|Tsku|ENSMUSG00000049580.13|tsukushi, small leucine rich proteoglycan	ENSMUST00000164726.8|Tsku|ENSMUSG00000049580.13|tsukushi, small leucine rich proteoglycan	ENSMUST00000206414.2|Tsku|ENSMUSG00000049580.13|tsukushi, small leucine rich proteoglycan	ENSMUST00000167405.3|Tsku|ENSMUSG00000049580.13|tsukushi, small leucine rich proteoglycan
mm39_v1_chr14_-_52434863_52434923	0.012436054564243086	Sox2	ENSMUST00000046709.9|Supt16|ENSMUSG00000035726.9|SPT16, facilitates chromatin remodeling subunit
mm39_v1_chr7_-_37472290_37472316	0.01239231193538641	Sox2	ENSMUST00000176205.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr7_-_37469049_37469102	0.012321959629867986	Sox2	ENSMUST00000175941.8|Zfp536|ENSMUSG00000043456.18|zinc finger protein 536
mm39_v1_chr14_-_18135010_18135010	0.012268204174630943	Sox2	ENSMUST00000165466.8|2610042L04Rik|ENSMUSG00000079388.10|RIKEN cDNA 2610042L04 gene
mm39_v1_chr5_+_87814058_87814092	0.012189963238646616	Sox2	ENSMUST00000199506.5|Csn1s1|ENSMUSG00000070702.10|casein alpha s1	ENSMUST00000197631.5|Csn1s1|ENSMUSG00000070702.10|casein alpha s1	ENSMUST00000094641.9|Csn1s1|ENSMUSG00000070702.10|casein alpha s1
mm39_v1_chr13_-_96572460_96572475	0.012160063207531307	Sox2	ENSMUST00000181761.2|Ankdd1b|ENSMUSG00000047117.14|ankyrin repeat and death domain containing 1B
mm39_v1_chr2_+_176522933_176522933	0.011840452995624891	Sox2	ENSMUST00000126726.2|Gm14408|ENSMUSG00000078876.11|predicted gene 14408	ENSMUST00000122218.9|Gm14408|ENSMUSG00000078876.11|predicted gene 14408
mm39_v1_chr2_-_119060330_119060358	0.01182882139053737	Sox2	ENSMUST00000110820.3|Ppp1r14d|ENSMUSG00000027317.9|protein phosphatase 1, regulatory inhibitor subunit 14D
mm39_v1_chr7_+_16678568_16678646	0.011731516788770768	Sox2	ENSMUST00000094807.6|Pnmal2|ENSMUSG00000070802.6|PNMA-like 2
mm39_v1_chr9_+_99125420_99125535	0.011564311249760626	Sox2	ENSMUST00000185799.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000093795.10|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000190715.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000191335.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70	ENSMUST00000190078.7|Cep70|ENSMUSG00000056267.15|centrosomal protein 70
mm39_v1_chr7_+_86564302_86564302	0.011357907287223813	Sox2	ENSMUST00000233033.2|Vmn2r78|ENSMUSG00000091962.4|vomeronasal 2, receptor 78	ENSMUST00000170835.4|Vmn2r78|ENSMUSG00000091962.4|vomeronasal 2, receptor 78
mm39_v1_chr19_-_47680528_47680535	0.01110884715347893	Sox2	ENSMUST00000026045.14|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1	ENSMUST00000086923.6|Col17a1|ENSMUSG00000025064.16|collagen, type XVII, alpha 1
mm39_v1_chr7_+_29003382_29003432	0.011071308289745344	Sox2	ENSMUST00000049977.13|Dpf1|ENSMUSG00000030584.15|D4, zinc and double PHD fingers family 1
mm39_v1_chr9_-_66032134_66032168	0.010954469450109434	Sox2	ENSMUST00000034946.15|Snx1|ENSMUSG00000032382.15|sorting nexin 1
mm39_v1_chr4_+_136011969_136011996	0.010857512858112019	Sox2	ENSMUST00000144217.8|Zfp46|ENSMUSG00000051351.15|zinc finger protein 46
mm39_v1_chr9_-_75518357_75518385	0.01082174696275509	Sox2	ENSMUST00000213565.2|Tmod2|ENSMUSG00000032186.16|tropomodulin 2
mm39_v1_chr6_-_69477770_69477826	0.010474103854641117	Sox2	ENSMUST00000197448.2|Igkv4-58|ENSMUSG00000095633.3|immunoglobulin kappa variable 4-58
mm39_v1_chr1_-_155627430_155627484	0.010360009345182372	Sox2	ENSMUST00000195275.2|Lhx4|ENSMUSG00000026468.15|LIM homeobox protein 4
mm39_v1_chr3_+_30800474_30800489	0.010327857079717565	Sox2	ENSMUST00000108262.10|Samd7|ENSMUSG00000051860.14|sterile alpha motif domain containing 7
mm39_v1_chr9_-_58220469_58220498	0.010262832747200318	Sox2	ENSMUST00000061799.10|Loxl1|ENSMUSG00000032334.11|lysyl oxidase-like 1
mm39_v1_chr14_+_60615690_60615741	0.010055123128013212	Sox2	ENSMUST00000239079.2|Amer2|ENSMUSG00000021986.10|APC membrane recruitment 2
mm39_v1_chr2_-_65397850_65397971	0.009924258170224439	Sox2	ENSMUST00000238483.2|Scn3a|ENSMUSG00000057182.16|sodium channel, voltage-gated, type III, alpha	ENSMUST00000100069.9|Scn3a|ENSMUSG00000057182.16|sodium channel, voltage-gated, type III, alpha
mm39_v1_chr2_-_146927365_146927406	0.009751722874791497	Sox2	ENSMUST00000067020.3|Nkx2-4|ENSMUSG00000054160.3|NK2 homeobox 4
mm39_v1_chr8_+_12997948_12997962	0.009559482195870052	Sox2	ENSMUST00000110871.8|Mcf2l|ENSMUSG00000031442.22|mcf.2 transforming sequence-like
mm39_v1_chr1_-_13197387_13197473	0.009513388748694954	Sox2	ENSMUST00000047577.7|Prdm14|ENSMUSG00000042414.8|PR domain containing 14
mm39_v1_chr16_-_10614679_10614750	0.009426607545842104	Sox2	ENSMUST00000023144.6|Prm1|ENSMUSG00000022501.7|protamine 1
mm39_v1_chr3_+_95018324_95018398	0.00941642593526843	Sox2	ENSMUST00000009102.9|Vps72|ENSMUSG00000008958.15|vacuolar protein sorting 72
mm39_v1_chr13_+_55782814_55782864	0.009396663677844301	Sox2	ENSMUST00000172272.8|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000099479.4|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000223736.2|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46
mm39_v1_chr15_+_75576149_75576243	0.009266983313333605	Sox2	ENSMUST00000023244.6|Rhpn1|ENSMUSG00000022580.14|rhophilin, Rho GTPase binding protein 1
mm39_v1_chr13_+_52737473_52737485	0.009089100724698719	Sox2	ENSMUST00000118756.8|Syk|ENSMUSG00000021457.15|spleen tyrosine kinase
mm39_v1_chr16_+_48104098_48104150	0.008954163447089006	Sox2	ENSMUST00000096045.9|Dppa4|ENSMUSG00000058550.16|developmental pluripotency associated 4	ENSMUST00000050705.4|Dppa4|ENSMUSG00000058550.16|developmental pluripotency associated 4
mm39_v1_chr4_-_151946219_151946333	0.008946768620839445	Sox2	ENSMUST00000097774.9|Camta1|ENSMUSG00000014592.22|calmodulin binding transcription activator 1
mm39_v1_chr6_-_88851579_88851778	0.00889411558112066	Sox2	ENSMUST00000061262.11|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2	ENSMUST00000140455.8|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2	ENSMUST00000145780.2|Podxl2|ENSMUSG00000033152.14|podocalyxin-like 2
mm39_v1_chrX_+_7765589_7765602	0.008821518854188748	Sox2	ENSMUST00000033498.10|Timm17b|ENSMUSG00000031158.12|translocase of inner mitochondrial membrane 17b
mm39_v1_chr7_-_105131407_105131507	0.008789740862405243	Sox2	ENSMUST00000047040.4|Cavin3|ENSMUSG00000037060.4|caveolae associated 3
mm39_v1_chr10_+_119655294_119655430	0.008765747249560854	Sox2	ENSMUST00000105262.9|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000147454.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000138410.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000144825.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000148954.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1	ENSMUST00000144959.8|Grip1|ENSMUSG00000034813.19|glutamate receptor interacting protein 1
mm39_v1_chr7_+_44984723_44984771	0.00858476146159065	Sox2	ENSMUST00000211327.2|Hrc|ENSMUSG00000038239.12|histidine rich calcium binding protein
mm39_v1_chr8_-_106306477_106306519	0.008515739070628196	Sox2	ENSMUST00000194654.2|Agrp|ENSMUSG00000005705.11|agouti related neuropeptide
mm39_v1_chr11_-_91468339_91468406	0.008503653279221231	Sox2	ENSMUST00000061019.6|Kif2b|ENSMUSG00000046755.6|kinesin family member 2B
mm39_v1_chr9_-_66500312_66500323	0.008478561522302704	Sox2	ENSMUST00000098613.9|Usp3|ENSMUSG00000032376.13|ubiquitin specific peptidase 3
mm39_v1_chr16_-_34334454_34334498	0.008391956004843956	Sox2	ENSMUST00000089655.12|Kalrn|ENSMUSG00000061751.17|kalirin, RhoGEF kinase
mm39_v1_chr7_-_115445315_115445347	0.00830474293074946	Sox2	ENSMUST00000166207.3|Sox6|ENSMUSG00000051910.14|SRY (sex determining region Y)-box 6
mm39_v1_chr14_+_53853772_53853772	0.00825069482324975	Sox2	ENSMUST00000180972.3|Trav12-2|ENSMUSG00000096656.7|T cell receptor alpha variable 12-2
mm39_v1_chr17_-_34337446_34337475	0.008240956854285598	Sox2	ENSMUST00000095347.13|Brd2|ENSMUSG00000024335.21|bromodomain containing 2
mm39_v1_chr11_-_94376158_94376182	0.00822308953450239	Sox2	ENSMUST00000041705.8|Spata20|ENSMUSG00000020867.14|spermatogenesis associated 20
mm39_v1_chr16_+_27207599_27207619	0.008197682193176561	Sox2	ENSMUST00000239351.2|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50	ENSMUST00000100026.10|Ccdc50|ENSMUSG00000038127.16|coiled-coil domain containing 50
mm39_v1_chr6_-_122463422_122463515	0.008030716171093211	Sox2	ENSMUST00000068242.9|Rimklb|ENSMUSG00000040649.16|ribosomal modification protein rimK-like family member B
mm39_v1_chr14_+_75879689_75879699	0.008019783284287619	Sox2	ENSMUST00000238633.2|Erich6b|ENSMUSG00000022002.3|glutamate rich 6B	ENSMUST00000022579.2|Erich6b|ENSMUSG00000022002.3|glutamate rich 6B
mm39_v1_chr1_+_81055201_81055300	0.00796877770354685	Sox2	ENSMUST00000123285.2|Nyap2|ENSMUSG00000054976.15|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm39_v1_chr7_-_79036222_79036513	0.0077893749387525435	Sox2	ENSMUST00000205638.2|Rlbp1|ENSMUSG00000039194.17|retinaldehyde binding protein 1	ENSMUST00000206320.3|Rlbp1|ENSMUSG00000039194.17|retinaldehyde binding protein 1	ENSMUST00000205442.2|Rlbp1|ENSMUSG00000039194.17|retinaldehyde binding protein 1
mm39_v1_chr7_+_127344942_127344999	0.007784111111856679	Sox2	ENSMUST00000189562.7|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19	ENSMUST00000186116.7|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19
mm39_v1_chr1_+_82817794_82817893	0.007743892015912076	Sox2	ENSMUST00000186043.2|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr9_-_66500274_66500305	0.007669172170681189	Sox2	ENSMUST00000174387.2|Usp3|ENSMUSG00000032376.13|ubiquitin specific peptidase 3
mm39_v1_chr7_-_34914675_34914923	0.007652429389992243	Sox2	ENSMUST00000118444.3|Lrp3|ENSMUSG00000001802.17|low density lipoprotein receptor-related protein 3	ENSMUST00000122409.8|Lrp3|ENSMUSG00000001802.17|low density lipoprotein receptor-related protein 3
mm39_v1_chr7_+_19016536_19016628	0.007649532258704926	Sox2	ENSMUST00000032559.17|Rtn2|ENSMUSG00000030401.17|reticulon 2 (Z-band associated protein)
mm39_v1_chr7_+_64151697_64151797	0.0075556775513331564	Sox2	ENSMUST00000205613.2|Apba2|ENSMUSG00000030519.15|amyloid beta (A4) precursor protein-binding, family A, member 2
mm39_v1_chr14_+_69409251_69409414	0.007532194856495815	Sox2	ENSMUST00000062437.10|Nkx2-6|ENSMUSG00000044186.11|NK2 homeobox 6
mm39_v1_chr5_+_32768515_32768589	0.007463937545318094	Sox2	ENSMUST00000202543.4|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase	ENSMUST00000072311.13|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase
mm39_v1_chr18_+_13139992_13140094	0.007415571614189911	Sox2	ENSMUST00000041676.3|Hrh4|ENSMUSG00000037346.6|histamine receptor H4	ENSMUST00000234084.2|Hrh4|ENSMUSG00000037346.6|histamine receptor H4	ENSMUST00000234565.2|Hrh4|ENSMUSG00000037346.6|histamine receptor H4
mm39_v1_chr7_+_26819334_26819391	0.007347704562388586	Sox2	ENSMUST00000003100.10|Cyp2f2|ENSMUSG00000052974.9|cytochrome P450, family 2, subfamily f, polypeptide 2
mm39_v1_chr16_+_78098626_78098647	0.007150536158122144	Sox2	ENSMUST00000114229.4|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor	ENSMUST00000231356.2|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor
mm39_v1_chr8_-_85663976_85663996	0.006982410048991651	Sox2	ENSMUST00000109741.9|Mast1|ENSMUSG00000053693.17|microtubule associated serine/threonine kinase 1	ENSMUST00000119820.2|Mast1|ENSMUSG00000053693.17|microtubule associated serine/threonine kinase 1
mm39_v1_chr15_+_89452529_89452586	0.006884775966979853	Sox2	ENSMUST00000023295.3|Acr|ENSMUSG00000022622.6|acrosin prepropeptide	ENSMUST00000230538.2|Acr|ENSMUSG00000022622.6|acrosin prepropeptide	ENSMUST00000230978.2|Acr|ENSMUSG00000022622.6|acrosin prepropeptide
mm39_v1_chr13_+_50852348_50852348	0.006803977447914393	Sox2	ENSMUST00000099518.4|Gm8765|ENSMUSG00000094918.4|predicted gene 8765
mm39_v1_chr8_+_95721378_95721416	0.006486540878017677	Sox2	ENSMUST00000212956.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1	ENSMUST00000212531.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr7_+_106969919_106969937	0.0064596411251775345	Sox2	ENSMUST00000137663.2|Syt9|ENSMUSG00000062542.12|synaptotagmin IX
mm39_v1_chr3_+_94391676_94391717	0.006401852253826821	Sox2	ENSMUST00000198384.3|Celf3|ENSMUSG00000028137.10|CUGBP, Elav-like family member 3
mm39_v1_chr5_+_76805520_76805570	0.0063128339352367495	Sox2	ENSMUST00000128112.8|Cracd|ENSMUSG00000036377.20|capping protein inhibiting regulator of actin
mm39_v1_chr10_-_108535970_108536021	0.006293446165181572	Sox2	ENSMUST00000218023.2|Gm5136|ENSMUSG00000112039.2|predicted gene 5136
mm39_v1_chr2_+_131333800_131333864	0.006253996986851034	Sox2	ENSMUST00000110179.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110189.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110182.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110183.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110186.9|Smox|ENSMUSG00000027333.19|spermine oxidase	ENSMUST00000110188.8|Smox|ENSMUSG00000027333.19|spermine oxidase
mm39_v1_chr6_-_49240944_49240992	0.0061775929585739416	Sox2	ENSMUST00000204189.3|Tra2a|ENSMUSG00000029817.12|transformer 2 alpha	ENSMUST00000031841.9|Tra2a|ENSMUSG00000029817.12|transformer 2 alpha
mm39_v1_chr9_+_38684364_38684384	0.006156014535898868	Sox2	ENSMUST00000217114.3|Olfr921|ENSMUSG00000049926.6|olfactory receptor 921	ENSMUST00000213958.3|Olfr921|ENSMUSG00000049926.6|olfactory receptor 921
mm39_v1_chr7_-_133203838_133203894	0.006048464937172578	Sox2	ENSMUST00000033275.4|Tex36|ENSMUSG00000030976.4|testis expressed 36
mm39_v1_chr16_-_3726452_3726487	0.005996119202347052	Sox2	ENSMUST00000123235.3|1700037C18Rik|ENSMUSG00000005983.16|RIKEN cDNA 1700037C18 gene
mm39_v1_chr5_+_148202075_148202115	0.005929971227193387	Sox2	ENSMUST00000071878.12|Mtus2|ENSMUSG00000029651.17|microtubule associated tumor suppressor candidate 2
mm39_v1_chr17_-_46749370_46749415	0.005737195329824178	Sox2	ENSMUST00000087012.7|Slc22a7|ENSMUSG00000067144.8|solute carrier family 22 (organic anion transporter), member 7
mm39_v1_chr9_+_27308497_27308530	0.005709683951567979	Sox2	ENSMUST00000214287.2|Spata19|ENSMUSG00000031991.11|spermatogenesis associated 19
mm39_v1_chr11_-_26160553_26160586	0.005449517155088811	Sox2	ENSMUST00000109511.8|5730522E02Rik|ENSMUSG00000032985.16|RIKEN cDNA 5730522E02 gene
mm39_v1_chr3_-_87934772_87934808	0.005330972999615491	Sox2	ENSMUST00000005014.9|Hapln2|ENSMUSG00000004894.11|hyaluronan and proteoglycan link protein 2
mm39_v1_chrX_-_103024847_103024893	0.005315878233438549	Sox2	ENSMUST00000121153.8|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting	ENSMUST00000070705.6|Rlim|ENSMUSG00000056537.12|ring finger protein, LIM domain interacting
mm39_v1_chr18_+_12466876_12467002	0.005031895488706361	Sox2	ENSMUST00000092070.13|Lama3|ENSMUSG00000024421.17|laminin, alpha 3
mm39_v1_chr2_-_104240679_104240679	0.004998298996554911	Sox2	ENSMUST00000136156.9|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene	ENSMUST00000141159.9|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene	ENSMUST00000089726.10|D430041D05Rik|ENSMUSG00000068373.16|RIKEN cDNA D430041D05 gene
mm39_v1_chr5_+_31011140_31011144	0.00497670616514883	Sox2	ENSMUST00000202501.2|Mapre3|ENSMUSG00000029166.15|microtubule-associated protein, RP/EB family, member 3
mm39_v1_chr19_+_8641369_8641484	0.0049718153503086684	Sox2	ENSMUST00000035444.10|Chrm1|ENSMUSG00000032773.10|cholinergic receptor, muscarinic 1, CNS	ENSMUST00000163785.2|Chrm1|ENSMUSG00000032773.10|cholinergic receptor, muscarinic 1, CNS
mm39_v1_chr3_-_151953894_151953912	0.004961592487835476	Sox2	ENSMUST00000196529.5|Nexn|ENSMUSG00000039103.13|nexilin
mm39_v1_chr5_+_37332834_37332852	0.004855001318840282	Sox2	ENSMUST00000208827.2|Gm1043|ENSMUSG00000117286.2|predicted gene 1043	ENSMUST00000207619.2|Gm1043|ENSMUSG00000117286.2|predicted gene 1043
mm39_v1_chr10_-_80861239_80861246	0.004714782604087176	Sox2	ENSMUST00000055125.5|Diras1|ENSMUSG00000043670.5|DIRAS family, GTP-binding RAS-like 1
mm39_v1_chr13_-_21726945_21726978	0.004711965292361674	Sox2	ENSMUST00000205976.3|Olfr1366|ENSMUSG00000048996.7|olfactory receptor 1366	ENSMUST00000175637.3|Olfr1366|ENSMUSG00000048996.7|olfactory receptor 1366
mm39_v1_chr4_-_107164315_107164346	0.004630488207684149	Sox2	ENSMUST00000126291.2|Dio1|ENSMUSG00000034785.16|deiodinase, iodothyronine, type I	ENSMUST00000106748.2|Dio1|ENSMUSG00000034785.16|deiodinase, iodothyronine, type I	ENSMUST00000129138.2|Dio1|ENSMUSG00000034785.16|deiodinase, iodothyronine, type I
mm39_v1_chr11_+_117223161_117223174	0.0044967670307418505	Sox2	ENSMUST00000106349.2|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr19_-_13080648_13080648	0.004489199709771582	Sox2	ENSMUST00000076729.4|Olfr1458|ENSMUSG00000062844.7|olfactory receptor 1458
mm39_v1_chr2_+_25627017_25627021	0.0043035666401986744	Sox2	ENSMUST00000114192.2|Obp2b|ENSMUSG00000079539.3|odorant binding protein 2B
mm39_v1_chr7_-_132724344_132724513	0.004223981415591523	Sox2	ENSMUST00000167218.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr11_+_20581952_20582006	0.004206818016543678	Sox2	ENSMUST00000109586.3|Sertad2|ENSMUSG00000049800.14|SERTA domain containing 2
mm39_v1_chrX_-_142610371_142610410	0.004178915769568712	Sox2	ENSMUST00000087316.6|Capn6|ENSMUSG00000067276.6|calpain 6
mm39_v1_chr14_-_16968099_16968099	0.004166556445280148	Sox2	ENSMUST00000181562.8|Gm3488|ENSMUSG00000095295.9|predicted gene, 3488
mm39_v1_chrX_-_100865583_100865583	0.004142999674738058	Sox2	ENSMUST00000239206.2|Gm3858|ENSMUSG00000118638.2|predicted gene 3858
mm39_v1_chr13_+_98416395_98416395	0.0040897610325020565	Sox2	ENSMUST00000180066.9|Gm21976|ENSMUSG00000096330.9|predicted gene 21976
mm39_v1_chr18_+_12874368_12874385	0.0040673011008438105	Sox2	ENSMUST00000235000.2|Cabyr|ENSMUSG00000024430.15|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)	ENSMUST00000115857.9|Cabyr|ENSMUSG00000024430.15|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
mm39_v1_chr1_+_6805048_6805100	0.004024600113880793	Sox2	ENSMUST00000139838.8|St18|ENSMUSG00000033740.18|suppression of tumorigenicity 18
mm39_v1_chr17_+_28749780_28749805	0.003956346398942718	Sox2	ENSMUST00000233923.2|Armc12|ENSMUSG00000024223.4|armadillo repeat containing 12
mm39_v1_chr19_+_4131565_4131583	0.00392480483648014	Sox2	ENSMUST00000159593.8|Cabp2|ENSMUSG00000024857.17|calcium binding protein 2
mm39_v1_chr8_+_72863330_72863330	0.003884198423206323	Sox2	ENSMUST00000209675.2|Olfr374|ENSMUSG00000046881.8|olfactory receptor 374
mm39_v1_chr18_-_20192535_20192611	0.00386034706924753	Sox2	ENSMUST00000075214.9|Dsc2|ENSMUSG00000024331.12|desmocollin 2	ENSMUST00000039247.11|Dsc2|ENSMUSG00000024331.12|desmocollin 2
mm39_v1_chr2_+_181134977_181135007	0.0038403228866740386	Sox2	ENSMUST00000069649.9|Abhd16b|ENSMUSG00000055882.9|abhydrolase domain containing 16B
mm39_v1_chrX_+_91533555_91533555	0.0037554783596375745	Sox2	ENSMUST00000096371.3|Gm5941|ENSMUSG00000071726.3|predicted gene 5941
mm39_v1_chr2_+_90817948_90818091	0.003722750058835427	Sox2	ENSMUST00000111452.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111455.9|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr5_-_33375509_33375567	0.0036851130270006663	Sox2	ENSMUST00000201475.2|Spon2|ENSMUSG00000037379.8|spondin 2, extracellular matrix protein
mm39_v1_chr4_-_82939330_82939372	0.0036850666687772947	Sox2	ENSMUST00000071708.12|Frem1|ENSMUSG00000059049.15|Fras1 related extracellular matrix protein 1
mm39_v1_chr17_+_28749808_28749853	0.0036811037384549437	Sox2	ENSMUST00000233837.2|Armc12|ENSMUSG00000024223.4|armadillo repeat containing 12	ENSMUST00000025060.4|Armc12|ENSMUSG00000024223.4|armadillo repeat containing 12
mm39_v1_chr4_-_103148051_103148066	0.0036321188605599824	Sox2	ENSMUST00000030245.10|4921539E11Rik|ENSMUSG00000028520.13|RIKEN cDNA 4921539E11 gene	ENSMUST00000168664.8|4921539E11Rik|ENSMUSG00000028520.13|RIKEN cDNA 4921539E11 gene	ENSMUST00000097944.4|4921539E11Rik|ENSMUSG00000028520.13|RIKEN cDNA 4921539E11 gene
mm39_v1_chr4_+_47208004_47208161	0.003582559747219466	Sox2	ENSMUST00000082303.13|Col15a1|ENSMUSG00000028339.18|collagen, type XV, alpha 1	ENSMUST00000102917.11|Col15a1|ENSMUSG00000028339.18|collagen, type XV, alpha 1
mm39_v1_chr11_-_46280281_46280295	0.00354591608188094	Sox2	ENSMUST00000101306.4|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr17_+_37313502_37313562	0.0034885772190958388	Sox2	ENSMUST00000173921.8|Zfp57|ENSMUSG00000036036.16|zinc finger protein 57	ENSMUST00000172580.8|Zfp57|ENSMUSG00000036036.16|zinc finger protein 57
mm39_v1_chr12_+_24881582_24881657	0.003408795612883159	Sox2	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr8_-_96302083_96302083	0.0033694513227263	Sox2	ENSMUST00000213096.2|Prss54|ENSMUSG00000048400.14|protease, serine 54	ENSMUST00000052690.13|Prss54|ENSMUSG00000048400.14|protease, serine 54
mm39_v1_chr5_+_148202117_148202155	0.0033681520091059353	Sox2	ENSMUST00000110514.8|Mtus2|ENSMUSG00000029651.17|microtubule associated tumor suppressor candidate 2
mm39_v1_chr9_-_38899578_38899611	0.003145954263043529	Sox2	ENSMUST00000216823.2|Olfr934|ENSMUSG00000057424.4|olfactory receptor 934	ENSMUST00000214324.3|Olfr934|ENSMUSG00000057424.4|olfactory receptor 934
mm39_v1_chr4_-_137157824_137157851	0.0031288930927656274	Sox2	ENSMUST00000102522.5|Cela3b|ENSMUSG00000023433.9|chymotrypsin-like elastase family, member 3B
mm39_v1_chr18_+_37397991_37397991	0.003082116765914744	Sox2	ENSMUST00000052366.5|Pcdhb1|ENSMUSG00000051663.5|protocadherin beta 1
mm39_v1_chr8_+_95721019_95721106	0.002997558118405966	Sox2	ENSMUST00000212976.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1	ENSMUST00000212995.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr8_-_68514879_68515033	0.00288325671561472	Sox2	ENSMUST00000212505.2|Psd3|ENSMUSG00000030465.20|pleckstrin and Sec7 domain containing 3
mm39_v1_chr6_+_47221372_47221387	0.0028808105163213326	Sox2	ENSMUST00000060839.8|Cntnap2|ENSMUSG00000039419.18|contactin associated protein-like 2
mm39_v1_chr9_-_37058590_37058703	0.002870921402227894	Sox2	ENSMUST00000080754.12|Pknox2|ENSMUSG00000035934.17|Pbx/knotted 1 homeobox 2	ENSMUST00000188057.7|Pknox2|ENSMUSG00000035934.17|Pbx/knotted 1 homeobox 2	ENSMUST00000039674.13|Pknox2|ENSMUSG00000035934.17|Pbx/knotted 1 homeobox 2
mm39_v1_chr7_+_127566629_127566680	0.002815601060492717	Sox2	ENSMUST00000106251.10|Fus|ENSMUSG00000030795.19|fused in sarcoma	ENSMUST00000077609.12|Fus|ENSMUSG00000030795.19|fused in sarcoma	ENSMUST00000121616.9|Fus|ENSMUSG00000030795.19|fused in sarcoma
mm39_v1_chr12_+_112645237_112645312	0.0025692697125754343	Sox2	ENSMUST00000174780.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000169593.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000173942.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42
mm39_v1_chr13_-_63721412_63721412	0.002564750111319672	Sox2	ENSMUST00000195106.2|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr2_+_74505350_74505357	0.0025642999162462845	Sox2	ENSMUST00000001878.6|Hoxd12|ENSMUSG00000001823.6|homeobox D12
mm39_v1_chr2_+_74566740_74566859	0.002518235179764033	Sox2	ENSMUST00000111982.8|Hoxd3|ENSMUSG00000079277.10|homeobox D3
mm39_v1_chr9_+_65537834_65537881	0.002374824542989278	Sox2	ENSMUST00000055844.10|Rbpms2|ENSMUSG00000032387.16|RNA binding protein with multiple splicing 2
mm39_v1_chr2_-_35257741_35257749	0.0023707999902549634	Sox2	ENSMUST00000028243.2|4930568D16Rik|ENSMUSG00000026882.2|RIKEN cDNA 4930568D16 gene
mm39_v1_chr9_-_65424281_65424281	0.0023380104157700605	Sox2	ENSMUST00000061766.6|Ankdd1a|ENSMUSG00000066510.6|ankyrin repeat and death domain containing 1A
mm39_v1_chr7_+_139827152_139827294	0.0023040361468495466	Sox2	ENSMUST00000164583.8|Scart2|ENSMUSG00000054672.14|scavenger receptor family member expressed on T cells 2	ENSMUST00000093984.3|Scart2|ENSMUSG00000054672.14|scavenger receptor family member expressed on T cells 2
mm39_v1_chr15_-_88838605_88838631	0.002282296408772084	Sox2	ENSMUST00000109371.8|Ttll8|ENSMUSG00000022388.15|tubulin tyrosine ligase-like family, member 8
mm39_v1_chr4_-_155127601_155127630	0.0021856697312108812	Sox2	ENSMUST00000135665.9|Plch2|ENSMUSG00000029055.18|phospholipase C, eta 2
mm39_v1_chr4_-_115504907_115504925	0.0021666376816407763	Sox2	ENSMUST00000102707.10|Cyp4b1|ENSMUSG00000028713.18|cytochrome P450, family 4, subfamily b, polypeptide 1
mm39_v1_chr5_-_116584765_116584903	0.0021166738495084414	Sox2	ENSMUST00000139425.2|Srrm4|ENSMUSG00000063919.12|serine/arginine repetitive matrix 4
mm39_v1_chr9_+_106391771_106391783	0.0021112111489059353	Sox2	ENSMUST00000085113.5|Iqcf5|ENSMUSG00000066382.5|IQ motif containing F5
mm39_v1_chr11_-_102709936_102710041	0.002054345720764794	Sox2	ENSMUST00000068933.12|Gjc1|ENSMUSG00000034520.15|gap junction protein, gamma 1
mm39_v1_chr12_-_110945052_110945077	0.001964114273328613	Sox2	ENSMUST00000140788.8|Ankrd9|ENSMUSG00000037904.15|ankyrin repeat domain 9
mm39_v1_chr14_+_43781033_43781033	0.001936717040860485	Sox2	ENSMUST00000169023.2|Gm5799|ENSMUSG00000091477.2|predicted gene 5799
mm39_v1_chr4_+_120389415_120389462	0.0018917003633900694	Sox2	ENSMUST00000062990.4|Slfnl1|ENSMUSG00000047518.4|schlafen like 1
mm39_v1_chr17_+_37716368_37716368	0.0018675852185533529	Sox2	ENSMUST00000077008.4|Olfr107|ENSMUSG00000063188.5|olfactory receptor 107
mm39_v1_chr16_-_30369378_30369413	0.0018132952853331284	Sox2	ENSMUST00000140402.8|Tmem44|ENSMUSG00000022537.19|transmembrane protein 44
mm39_v1_chr1_+_133109059_133109145	0.0017423875334306109	Sox2	ENSMUST00000187285.7|Plekha6|ENSMUSG00000041757.18|pleckstrin homology domain containing, family A member 6
mm39_v1_chr7_-_139953579_139953579	0.0016922097749984583	Sox2	ENSMUST00000074177.3|Olfr530|ENSMUSG00000060974.4|olfactory receptor 530
mm39_v1_chr15_+_80057894_80057922	0.0016324617978129292	Sox2	ENSMUST00000044970.7|Mgat3|ENSMUSG00000042428.7|mannoside acetylglucosaminyltransferase 3
mm39_v1_chr13_-_67442285_67442285	0.0015333185918969187	Sox2	ENSMUST00000224325.2|Zfp457|ENSMUSG00000055341.11|zinc finger protein 457
mm39_v1_chr13_-_21843491_21843491	0.0015194864809070332	Sox2	ENSMUST00000055615.2|Olfr1361|ENSMUSG00000049737.3|olfactory receptor 1361
mm39_v1_chr14_-_70449438_70449498	0.001494213461347332	Sox2	ENSMUST00000227929.2|Sorbs3|ENSMUSG00000022091.7|sorbin and SH3 domain containing 3
mm39_v1_chr3_+_118355778_118355805	0.0014766570809675835	Sox2	ENSMUST00000039177.12|Dpyd|ENSMUSG00000033308.17|dihydropyrimidine dehydrogenase
mm39_v1_chr14_+_16182428_16182523	0.0014733991855913568	Sox2	ENSMUST00000170104.3|Gm3411|ENSMUSG00000079396.5|predicted gene 3411
mm39_v1_chr9_-_119019450_119019477	0.001446111685782364	Sox2	ENSMUST00000093775.12|Slc22a14|ENSMUSG00000070280.14|solute carrier family 22 (organic cation transporter), member 14
mm39_v1_chr12_+_104067346_104067372	0.0014267012734945188	Sox2	ENSMUST00000021495.4|Serpina5|ENSMUSG00000041550.5|serine (or cysteine) peptidase inhibitor, clade A, member 5
mm39_v1_chr17_-_25973288_25973356	0.001338696151606646	Sox2	ENSMUST00000075884.8|Msln|ENSMUSG00000063011.8|mesothelin	ENSMUST00000238120.2|Msln|ENSMUSG00000063011.8|mesothelin	ENSMUST00000236137.2|Msln|ENSMUSG00000063011.8|mesothelin	ENSMUST00000237359.2|Msln|ENSMUSG00000063011.8|mesothelin
mm39_v1_chr14_+_66208059_66208070	0.0013238025925041848	Sox2	ENSMUST00000127387.8|Clu|ENSMUSG00000022037.16|clusterin
mm39_v1_chr7_+_32033607_32033607	0.0013146054775555053	Sox2	ENSMUST00000188355.2|Scgb1b12|ENSMUSG00000101520.2|secretoglobin, family 1B, member 12
mm39_v1_chr8_-_110688716_110688846	0.0012198877603512082	Sox2	ENSMUST00000001722.14|Marveld3|ENSMUSG00000001672.15|MARVEL (membrane-associating) domain containing 3	ENSMUST00000051430.7|Marveld3|ENSMUSG00000001672.15|MARVEL (membrane-associating) domain containing 3
mm39_v1_chr15_+_98687720_98687738	0.0011544123985822961	Sox2	ENSMUST00000023734.8|Wnt1|ENSMUSG00000022997.10|wingless-type MMTV integration site family, member 1
mm39_v1_chr15_+_75576113_75576140	0.0011120631915395582	Sox2	ENSMUST00000121137.9|Rhpn1|ENSMUSG00000022580.14|rhophilin, Rho GTPase binding protein 1
mm39_v1_chr10_+_69761630_69761654	0.001111294872736512	Sox2	ENSMUST00000182029.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr4_+_109272828_109272846	0.0010209128750600029	Sox2	ENSMUST00000106618.8|Ttc39a|ENSMUSG00000028555.16|tetratricopeptide repeat domain 39A
mm39_v1_chr2_+_36827133_36827133	0.0009794098967594502	Sox2	ENSMUST00000095021.2|Olfr356|ENSMUSG00000070943.4|olfactory receptor 356
mm39_v1_chr5_+_142946098_142946131	0.000973776826851816	Sox2	ENSMUST00000031565.15|Fscn1|ENSMUSG00000029581.15|fascin actin-bundling protein 1	ENSMUST00000198017.5|Fscn1|ENSMUSG00000029581.15|fascin actin-bundling protein 1
mm39_v1_chr2_+_74542255_74542283	0.0009198969916577081	Sox2	ENSMUST00000111983.9|Hoxd3|ENSMUSG00000079277.10|homeobox D3
mm39_v1_chrX_+_160500623_160500653	0.0008910195105955713	Sox2	ENSMUST00000061514.8|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr1_+_59563453_59563453	0.0008850479810764103	Sox2	ENSMUST00000186434.3|Gm973|ENSMUSG00000047361.17|predicted gene 973
mm39_v1_chr7_-_127214372_127214391	0.0008654530855256126	Sox2	ENSMUST00000128731.8|Zfp629|ENSMUSG00000045639.15|zinc finger protein 629	ENSMUST00000122066.8|Zfp629|ENSMUSG00000045639.15|zinc finger protein 629
mm39_v1_chr2_-_26098293_26098305	0.0008352924603500195	Sox2	ENSMUST00000054099.16|Lhx3|ENSMUSG00000026934.16|LIM homeobox protein 3
mm39_v1_chr13_+_113346193_113346311	0.0007960881050370402	Sox2	ENSMUST00000038144.9|Esm1|ENSMUSG00000042379.9|endothelial cell-specific molecule 1
mm39_v1_chr7_+_106969950_106970053	0.0006358467284313236	Sox2	ENSMUST00000073459.12|Syt9|ENSMUSG00000062542.12|synaptotagmin IX
mm39_v1_chr16_-_58618305_58618305	0.000589000445170276	Sox2	ENSMUST00000049940.5|Olfr173|ENSMUSG00000049362.7|olfactory receptor 173
mm39_v1_chr4_-_62126598_62126660	0.0005688140714699133	Sox2	ENSMUST00000221329.2|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37	ENSMUST00000129511.3|Zfp37|ENSMUSG00000028389.13|zinc finger protein 37
mm39_v1_chrX_+_133195974_133195974	0.0005685369042087792	Sox2	ENSMUST00000037687.8|Tmem35a|ENSMUSG00000033578.8|transmembrane protein 35A
mm39_v1_chrX_+_11178173_11178173	0.0004978003434065814	Sox2	ENSMUST00000178979.2|H2al1e|ENSMUSG00000095413.2|H2A histone family member L1E
mm39_v1_chr7_+_103209686_103209686	0.0004638835892070429	Sox2	ENSMUST00000098198.3|Olfr615|ENSMUSG00000073947.5|olfactory receptor 615
mm39_v1_chr16_+_37597235_37597235	0.00043388236078361925	Sox2	ENSMUST00000114763.3|Fstl1|ENSMUSG00000022816.12|follistatin-like 1
mm39_v1_chr7_-_32529087_32529087	0.0004074724159196004	Sox2	ENSMUST00000182975.2|Scgb2b15|ENSMUSG00000097972.2|secretoglobin, family 2B, member 15
mm39_v1_chr14_+_16361108_16361108	0.0003794930592935765	Sox2	ENSMUST00000165193.2|Gm3468|ENSMUSG00000094634.9|predicted gene 3468
mm39_v1_chrX_-_101730578_101730578	0.0003739300405222064	Sox2	ENSMUST00000122154.3|Gm3880|ENSMUSG00000081443.3|predicted pseudogene 3880
mm39_v1_chr1_+_92500847_92500847	0.00033130061502782443	Sox2	ENSMUST00000074859.3|Olfr1413|ENSMUSG00000058904.4|olfactory receptor 1413
mm39_v1_chr8_-_71112295_71112388	0.00031664711817690146	Sox2	ENSMUST00000211715.2|Pgpep1|ENSMUSG00000056204.9|pyroglutamyl-peptidase I	ENSMUST00000210307.2|Pgpep1|ENSMUSG00000056204.9|pyroglutamyl-peptidase I	ENSMUST00000209768.2|Pgpep1|ENSMUSG00000056204.9|pyroglutamyl-peptidase I	ENSMUST00000070173.9|Pgpep1|ENSMUSG00000056204.9|pyroglutamyl-peptidase I
mm39_v1_chr7_+_17605684_17605701	0.0002773988319403732	Sox2	ENSMUST00000072381.14|Gm5155|ENSMUSG00000078793.11|predicted gene 5155
mm39_v1_chr9_+_35580920_35580939	0.00025269408158117446	Sox2	ENSMUST00000118254.2|Pate2|ENSMUSG00000074452.14|prostate and testis expressed 2
mm39_v1_chr12_-_113823290_113823320	0.00022818686260498664	Sox2	ENSMUST00000103459.5|Ighv5-17|ENSMUSG00000095571.3|immunoglobulin heavy variable 5-17
mm39_v1_chr14_+_15442324_15442324	0.0002068740026585419	Sox2	ENSMUST00000170738.3|Gm10406|ENSMUSG00000093985.8|predicted gene 10406
mm39_v1_chr18_+_20569226_20569241	0.00016804939196187214	Sox2	ENSMUST00000019426.5|Dsg4|ENSMUSG00000001804.10|desmoglein 4
mm39_v1_chr6_-_87365859_87365917	0.0001624369592212164	Sox2	ENSMUST00000032127.6|Gkn3|ENSMUSG00000030048.6|gastrokine 3
mm39_v1_chr11_-_11840394_11840409	0.00012154568527896282	Sox2	ENSMUST00000109659.9|Ddc|ENSMUSG00000020182.17|dopa decarboxylase
mm39_v1_chr11_+_116809669_116809717	0.00011063556302394175	Sox2	ENSMUST00000103027.10|Mgat5b|ENSMUSG00000043857.17|mannoside acetylglucosaminyltransferase 5, isoenzyme B
