mm39_v1_chr11_+_87651359_87651413	0.4402773352134053	UAAGGCA	ENSMUST00000039627.12|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1	ENSMUST00000100644.10|Tspoap1|ENSMUSG00000034156.17|TSPO associated protein 1
mm39_v1_chr19_+_3373285_3373356	0.2669468249273674	UAAGGCA	ENSMUST00000025835.6|Cpt1a|ENSMUSG00000024900.6|carnitine palmitoyltransferase 1a, liver
mm39_v1_chr17_+_87270504_87270537	0.2358893525691463	UAAGGCA	ENSMUST00000024956.15|Rhoq|ENSMUSG00000024143.16|ras homolog family member Q
mm39_v1_chr15_-_90563510_90563635	0.22362461433673253	UAAGGCA	ENSMUST00000014777.9|Cpne8|ENSMUSG00000052560.16|copine VIII	ENSMUST00000064391.12|Cpne8|ENSMUSG00000052560.16|copine VIII
mm39_v1_chr6_-_127128007_127128023	0.212331421587164	UAAGGCA	ENSMUST00000000188.12|Ccnd2|ENSMUSG00000000184.13|cyclin D2
mm39_v1_chr17_+_81251997_81252073	0.18374085586265212	UAAGGCA	ENSMUST00000025092.5|Tmem178|ENSMUSG00000024245.5|transmembrane protein 178
mm39_v1_chr17_-_12988492_12988588	0.18139553145890408	UAAGGCA	ENSMUST00000024599.14|Igf2r|ENSMUSG00000023830.15|insulin-like growth factor 2 receptor
mm39_v1_chr1_-_45964730_45964749	0.17501600228235498	UAAGGCA	ENSMUST00000027137.11|Slc40a1|ENSMUSG00000025993.11|solute carrier family 40 (iron-regulated transporter), member 1
mm39_v1_chr16_-_18052937_18053048	0.16912461342834106	UAAGGCA	ENSMUST00000076957.7|Zdhhc8|ENSMUSG00000060166.7|zinc finger, DHHC domain containing 8
mm39_v1_chr2_-_156921135_156921196	0.1559178428958017	UAAGGCA	ENSMUST00000069098.7|Soga1|ENSMUSG00000055485.7|suppressor of glucose, autophagy associated 1
mm39_v1_chr3_+_41510160_41510195	0.14536546439872813	UAAGGCA	ENSMUST00000026865.15|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1	ENSMUST00000194181.6|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1	ENSMUST00000195846.6|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr14_+_121272950_121272990	0.13354976145734604	UAAGGCA	ENSMUST00000026635.8|Farp1|ENSMUSG00000025555.15|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm39_v1_chr8_+_27575611_27575626	0.13165936963407596	UAAGGCA	ENSMUST00000178514.8|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2	ENSMUST00000033876.14|Adgra2|ENSMUSG00000031486.16|adhesion G protein-coupled receptor A2
mm39_v1_chr1_+_62742444_62742511	0.13005864091304395	UAAGGCA	ENSMUST00000102822.9|Nrp2|ENSMUSG00000025969.16|neuropilin 2	ENSMUST00000075144.12|Nrp2|ENSMUSG00000025969.16|neuropilin 2
mm39_v1_chr10_-_115220293_115220350	0.12999149944509944	UAAGGCA	ENSMUST00000020346.6|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2	ENSMUST00000218842.2|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2	ENSMUST00000218989.2|Thap2|ENSMUSG00000020137.6|THAP domain containing, apoptosis associated protein 2
mm39_v1_chr19_-_29025233_29025377	0.12891908839727684	UAAGGCA	ENSMUST00000025696.5|Ak3|ENSMUSG00000024782.8|adenylate kinase 3
mm39_v1_chr10_+_11157047_11157103	0.12889632638479828	UAAGGCA	ENSMUST00000129456.8|Fbxo30|ENSMUSG00000047648.14|F-box protein 30
mm39_v1_chr9_+_108539296_108539418	0.12482143341730305	UAAGGCA	ENSMUST00000035222.6|Slc25a20|ENSMUSG00000032602.7|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm39_v1_chr17_-_44416665_44416747	0.12270585857653533	UAAGGCA	ENSMUST00000024757.14|Enpp4|ENSMUSG00000023961.17|ectonucleotide pyrophosphatase/phosphodiesterase 4
mm39_v1_chr12_-_69771604_69771659	0.12261615536469256	UAAGGCA	ENSMUST00000021370.10|L2hgdh|ENSMUSG00000020988.10|L-2-hydroxyglutarate dehydrogenase
mm39_v1_chr8_-_105169621_105169679	0.12130074482176702	UAAGGCA	ENSMUST00000041769.8|Dync1li2|ENSMUSG00000035770.9|dynein, cytoplasmic 1 light intermediate chain 2
mm39_v1_chr1_-_64995982_64995994	0.11740972971776789	UAAGGCA	ENSMUST00000097713.2|Plekhm3|ENSMUSG00000051344.14|pleckstrin homology domain containing, family M, member 3
mm39_v1_chr5_+_137517140_137517140	0.1164018713951175	UAAGGCA	ENSMUST00000031727.10|Gigyf1|ENSMUSG00000029714.12|GRB10 interacting GYF protein 1
mm39_v1_chr15_-_103148239_103148297	0.11512594456901436	UAAGGCA	ENSMUST00000118152.8|Cbx5|ENSMUSG00000009575.15|chromobox 5
mm39_v1_chr2_+_3714492_3714507	0.1147747120470792	UAAGGCA	ENSMUST00000027965.11|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr8_-_125390107_125390122	0.11458184544004935	UAAGGCA	ENSMUST00000034464.8|2310022B05Rik|ENSMUSG00000031983.8|RIKEN cDNA 2310022B05 gene
mm39_v1_chr3_-_95125002_95125038	0.11238326382136012	UAAGGCA	ENSMUST00000107209.8|Gabpb2|ENSMUSG00000038766.17|GA repeat binding protein, beta 2
mm39_v1_chr4_-_141412910_141412910	0.11128680850019013	UAAGGCA	ENSMUST00000105782.2|Rsc1a1|ENSMUSG00000040715.13|regulatory solute carrier protein, family 1, member 1
mm39_v1_chr12_+_116244792_116244855	0.11021047814768666	UAAGGCA	ENSMUST00000100986.4|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2	ENSMUST00000220816.2|Esyt2|ENSMUSG00000021171.9|extended synaptotagmin-like protein 2
mm39_v1_chr4_-_156319232_156319332	0.1080474901252471	UAAGGCA	ENSMUST00000105569.5|Klhl17|ENSMUSG00002076083.1|kelch-like 17
mm39_v1_chr10_+_121575819_121575872	0.10644027097865598	UAAGGCA	ENSMUST00000065600.8|BC048403|ENSMUSG00000053684.9|cDNA sequence BC048403	ENSMUST00000136432.2|BC048403|ENSMUSG00000053684.9|cDNA sequence BC048403
mm39_v1_chr10_-_80413119_80413161	0.10550319904082259	UAAGGCA	ENSMUST00000038558.9|Klf16|ENSMUSG00000035397.9|Kruppel-like factor 16
mm39_v1_chr4_-_34687381_34687453	0.10471881858720782	UAAGGCA	ENSMUST00000029970.14|Slc35a1|ENSMUSG00000028293.15|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm39_v1_chr4_+_137321451_137321585	0.1046479867654783	UAAGGCA	ENSMUST00000105840.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105839.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000055131.13|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48	ENSMUST00000105838.8|Usp48|ENSMUSG00000043411.16|ubiquitin specific peptidase 48
mm39_v1_chr18_+_5591864_5591902	0.10378540428883247	UAAGGCA	ENSMUST00000025081.13|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1	ENSMUST00000159390.8|Zeb1|ENSMUSG00000024238.16|zinc finger E-box binding homeobox 1
mm39_v1_chr13_+_92981257_92981298	0.10120312401640025	UAAGGCA	ENSMUST00000076169.4|Mtx3|ENSMUSG00000021704.9|metaxin 3
mm39_v1_chr3_+_104545974_104545991	0.10026657707562593	UAAGGCA	ENSMUST00000046212.2|Slc16a1|ENSMUSG00000032902.2|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm39_v1_chr5_-_21260878_21260960	0.09981832557275083	UAAGGCA	ENSMUST00000030556.8|Ptpn12|ENSMUSG00000028771.14|protein tyrosine phosphatase, non-receptor type 12
mm39_v1_chr7_-_132415528_132415635	0.09877407247082837	UAAGGCA	ENSMUST00000097998.9|Fam53b|ENSMUSG00000030956.16|family with sequence similarity 53, member B
mm39_v1_chr16_+_16714333_16714462	0.09841780342859952	UAAGGCA	ENSMUST00000027373.12|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)	ENSMUST00000232247.2|Ppm1f|ENSMUSG00000026181.14|protein phosphatase 1F (PP2C domain containing)
mm39_v1_chr8_+_93581946_93582030	0.09830832855786538	UAAGGCA	ENSMUST00000046290.3|Lpcat2|ENSMUSG00000033192.6|lysophosphatidylcholine acyltransferase 2	ENSMUST00000210099.2|Lpcat2|ENSMUSG00000033192.6|lysophosphatidylcholine acyltransferase 2
mm39_v1_chr7_-_34755985_34756002	0.0979271441697566	UAAGGCA	ENSMUST00000130491.3|Cebpg|ENSMUSG00000056216.10|CCAAT/enhancer binding protein (C/EBP), gamma
mm39_v1_chr5_+_88731386_88731449	0.09642140724045987	UAAGGCA	ENSMUST00000031229.11|Rufy3|ENSMUSG00000029291.12|RUN and FYVE domain containing 3
mm39_v1_chr5_+_108213608_108213634	0.09599472300269618	UAAGGCA	ENSMUST00000081567.11|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000170319.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2	ENSMUST00000112626.8|Mtf2|ENSMUSG00000029267.18|metal response element binding transcription factor 2
mm39_v1_chr11_-_76400245_76400261	0.09546607166050747	UAAGGCA	ENSMUST00000094012.11|Abr|ENSMUSG00000017631.20|active BCR-related gene
mm39_v1_chr4_-_6990774_6990823	0.09523396838093036	UAAGGCA	ENSMUST00000039987.4|Tox|ENSMUSG00000041272.12|thymocyte selection-associated high mobility group box
mm39_v1_chr1_-_74544946_74545004	0.09273882056028586	UAAGGCA	ENSMUST00000044260.11|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37	ENSMUST00000186282.7|Usp37|ENSMUSG00000033364.14|ubiquitin specific peptidase 37
mm39_v1_chr3_-_119576911_119577037	0.09272836608048549	UAAGGCA	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr8_+_80366247_80366333	0.09151770991857462	UAAGGCA	ENSMUST00000173078.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4	ENSMUST00000173286.8|Otud4|ENSMUSG00000036990.14|OTU domain containing 4
mm39_v1_chr1_-_143652711_143652806	0.09123944985856838	UAAGGCA	ENSMUST00000159879.2|Ro60|ENSMUSG00000018199.10|Ro60, Y RNA binding protein
mm39_v1_chr3_-_9898713_9898739	0.09016538420047263	UAAGGCA	ENSMUST00000161949.8|Pag1|ENSMUSG00000027508.16|phosphoprotein associated with glycosphingolipid microdomains 1
mm39_v1_chr7_-_136916123_136916174	0.08907914219899327	UAAGGCA	ENSMUST00000106118.10|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000168203.2|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000169486.9|Ebf3|ENSMUSG00000010476.15|early B cell factor 3	ENSMUST00000033378.13|Ebf3|ENSMUSG00000010476.15|early B cell factor 3
mm39_v1_chr11_-_116472272_116472298	0.08821754103883539	UAAGGCA	ENSMUST00000082152.5|Ube2o|ENSMUSG00000020802.9|ubiquitin-conjugating enzyme E2O
mm39_v1_chr8_-_36716445_36716670	0.08791055098422523	UAAGGCA	ENSMUST00000239119.2|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1	ENSMUST00000065297.6|Lonrf1|ENSMUSG00000039633.8|LON peptidase N-terminal domain and ring finger 1
mm39_v1_chr13_-_12272962_12273020	0.08660873405957269	UAAGGCA	ENSMUST00000099856.6|Mtr|ENSMUSG00000021311.10|5-methyltetrahydrofolate-homocysteine methyltransferase
mm39_v1_chr16_-_21513317_21513415	0.08648546051136359	UAAGGCA	ENSMUST00000231592.2|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene	ENSMUST00000053336.8|2510009E07Rik|ENSMUSG00000043391.11|RIKEN cDNA 2510009E07 gene
mm39_v1_chr19_-_29625755_29625825	0.08531216839975105	UAAGGCA	ENSMUST00000159692.8|Ermp1|ENSMUSG00000046324.13|endoplasmic reticulum metallopeptidase 1
mm39_v1_chr5_-_113910571_113910718	0.08501953187573667	UAAGGCA	ENSMUST00000019118.8|Sart3|ENSMUSG00000018974.8|squamous cell carcinoma antigen recognized by T cells 3
mm39_v1_chr11_+_98798627_98798692	0.08468789706762958	UAAGGCA	ENSMUST00000092706.13|Cdc6|ENSMUSG00000017499.16|cell division cycle 6
mm39_v1_chr17_-_84495364_84495381	0.08357183789023755	UAAGGCA	ENSMUST00000060366.7|Zfp36l2|ENSMUSG00000045817.9|zinc finger protein 36, C3H type-like 2
mm39_v1_chr15_+_100659622_100659679	0.08274491744990915	UAAGGCA	ENSMUST00000023776.13|Slc4a8|ENSMUSG00000023032.13|solute carrier family 4 (anion exchanger), member 8
mm39_v1_chr16_+_14523696_14523722	0.08268039898753092	UAAGGCA	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr5_+_93241287_93241310	0.0819769074066392	UAAGGCA	ENSMUST00000074733.11|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000201700.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202196.4|Septin11|ENSMUSG00000058013.12|septin 11	ENSMUST00000202308.4|Septin11|ENSMUSG00000058013.12|septin 11
mm39_v1_chrX_+_97981352_97981402	0.08097630490776046	UAAGGCA	ENSMUST00000054697.7|Yipf6|ENSMUSG00000047694.13|Yip1 domain family, member 6
mm39_v1_chr17_+_5891582_5891686	0.08028934832826591	UAAGGCA	ENSMUST00000002436.11|Snx9|ENSMUSG00000002365.11|sorting nexin 9
mm39_v1_chr4_-_129534853_129534873	0.08005152118566627	UAAGGCA	ENSMUST00000046425.16|Txlna|ENSMUSG00000053841.16|taxilin alpha	ENSMUST00000133803.8|Txlna|ENSMUSG00000053841.16|taxilin alpha
mm39_v1_chr17_+_6320731_6320783	0.08001782804509959	UAAGGCA	ENSMUST00000088940.6|Tmem181a|ENSMUSG00000038141.12|transmembrane protein 181A
mm39_v1_chr11_+_103857541_103857697	0.07973820107143624	UAAGGCA	ENSMUST00000057921.10|Arf2|ENSMUSG00000062421.14|ADP-ribosylation factor 2	ENSMUST00000063347.12|Arf2|ENSMUSG00000062421.14|ADP-ribosylation factor 2
mm39_v1_chr4_+_59805829_59805914	0.07756635228720087	UAAGGCA	ENSMUST00000030080.7|Snx30|ENSMUSG00000028385.15|sorting nexin family member 30
mm39_v1_chr2_+_128659997_128660061	0.07755005450364165	UAAGGCA	ENSMUST00000110325.8|Tmem87b|ENSMUSG00000014353.16|transmembrane protein 87B
mm39_v1_chr4_-_141450710_141450747	0.07741728346469791	UAAGGCA	ENSMUST00000102484.5|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2	ENSMUST00000177592.2|Ddi2|ENSMUSG00000078515.5|DNA-damage inducible protein 2
mm39_v1_chr1_-_36484328_36484352	0.07735202481193755	UAAGGCA	ENSMUST00000125304.8|Lman2l|ENSMUSG00000001143.14|lectin, mannose-binding 2-like	ENSMUST00000115011.8|Lman2l|ENSMUSG00000001143.14|lectin, mannose-binding 2-like
mm39_v1_chrX_+_102400061_102400094	0.07645335693332761	UAAGGCA	ENSMUST00000116547.3|Chic1|ENSMUSG00000031327.11|cysteine-rich hydrophobic domain 1
mm39_v1_chr2_-_5900130_5900243	0.07615702066683495	UAAGGCA	ENSMUST00000026926.5|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)	ENSMUST00000193792.6|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)	ENSMUST00000102981.10|Sec61a2|ENSMUSG00000025816.16|Sec61, alpha subunit 2 (S. cerevisiae)
mm39_v1_chr3_-_19365431_19365486	0.07614835302884375	UAAGGCA	ENSMUST00000099195.10|Pde7a|ENSMUSG00000069094.13|phosphodiesterase 7A
mm39_v1_chr9_-_119151428_119151517	0.07587005179834495	UAAGGCA	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr9_+_32607301_32607417	0.07563926029723748	UAAGGCA	ENSMUST00000034534.13|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000050797.14|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain	ENSMUST00000184887.2|Ets1|ENSMUSG00000032035.17|E26 avian leukemia oncogene 1, 5' domain
mm39_v1_chr4_-_126323291_126323349	0.0750477788960704	UAAGGCA	ENSMUST00000069097.13|Ago3|ENSMUSG00000028842.16|argonaute RISC catalytic subunit 3
mm39_v1_chr9_+_57615816_57615891	0.07478043707113106	UAAGGCA	ENSMUST00000043990.14|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3	ENSMUST00000142807.2|Edc3|ENSMUSG00000038957.14|enhancer of mRNA decapping 3
mm39_v1_chr11_+_121150798_121150881	0.07453885018044076	UAAGGCA	ENSMUST00000106113.2|Foxk2|ENSMUSG00000039275.10|forkhead box K2
mm39_v1_chr2_-_23462052_23462124	0.0742907150153675	UAAGGCA	ENSMUST00000132484.7|Spopl|ENSMUSG00000026771.15|speckle-type BTB/POZ protein-like
mm39_v1_chr9_+_57444801_57444860	0.07334308286206298	UAAGGCA	ENSMUST00000093833.6|Fam219b|ENSMUSG00000032305.16|family with sequence similarity 219, member B	ENSMUST00000114200.10|Fam219b|ENSMUSG00000032305.16|family with sequence similarity 219, member B
mm39_v1_chr14_+_120715855_120715923	0.07163358517751735	UAAGGCA	ENSMUST00000062117.14|Rap2a|ENSMUSG00000051615.15|RAS related protein 2a
mm39_v1_chr12_+_59113659_59113670	0.07159444807181216	UAAGGCA	ENSMUST00000021381.6|Pnn|ENSMUSG00000020994.6|pinin
mm39_v1_chr6_+_116314975_116315044	0.07050747304278131	UAAGGCA	ENSMUST00000079012.13|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000101032.10|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000123405.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000204657.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203116.2|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000203193.3|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8	ENSMUST00000126376.8|Marchf8|ENSMUSG00000025702.16|membrane associated ring-CH-type finger 8
mm39_v1_chr15_+_88635852_88635863	0.07008378436566037	UAAGGCA	ENSMUST00000041297.15|Zbed4|ENSMUSG00000034333.16|zinc finger, BED type containing 4
mm39_v1_chr5_+_122422428_122422461	0.06978876420098543	UAAGGCA	ENSMUST00000053426.15|Pptc7|ENSMUSG00000038582.16|PTC7 protein phosphatase homolog
mm39_v1_chr14_+_30547541_30547595	0.06795667657760182	UAAGGCA	ENSMUST00000006701.8|Stimate|ENSMUSG00000006526.14|STIM activating enhancer
mm39_v1_chr9_+_74978429_74978511	0.06747540938027276	UAAGGCA	ENSMUST00000123128.8|Myo5a|ENSMUSG00000034593.17|myosin VA
mm39_v1_chr1_-_132067404_132067430	0.06663507114600797	UAAGGCA	ENSMUST00000027697.12|Cdk18|ENSMUSG00000026437.12|cyclin-dependent kinase 18
mm39_v1_chr9_-_50639230_50639308	0.06605601267218535	UAAGGCA	ENSMUST00000118707.2|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1	ENSMUST00000034566.15|Dixdc1|ENSMUSG00000032064.18|DIX domain containing 1
mm39_v1_chr12_+_76371634_76371674	0.06517535408029232	UAAGGCA	ENSMUST00000154078.3|Akap5|ENSMUSG00000021057.16|A kinase (PRKA) anchor protein 5	ENSMUST00000095610.9|Akap5|ENSMUSG00000021057.16|A kinase (PRKA) anchor protein 5
mm39_v1_chr18_+_36414122_36414204	0.06383026201005963	UAAGGCA	ENSMUST00000051301.6|Pura|ENSMUSG00000043991.6|purine rich element binding protein A
mm39_v1_chr2_+_162773440_162773581	0.06382464653396422	UAAGGCA	ENSMUST00000130411.7|Srsf6|ENSMUSG00000016921.15|serine and arginine-rich splicing factor 6	ENSMUST00000126163.3|Srsf6|ENSMUSG00000016921.15|serine and arginine-rich splicing factor 6
mm39_v1_chr4_-_155430153_155430266	0.06343709581396198	UAAGGCA	ENSMUST00000103178.11|Prkcz|ENSMUSG00000029053.17|protein kinase C, zeta
mm39_v1_chr5_-_124170305_124170353	0.06292442169332896	UAAGGCA	ENSMUST00000040967.9|Vps37b|ENSMUSG00000066278.7|vacuolar protein sorting 37B
mm39_v1_chr11_-_74787877_74787920	0.06291618616521504	UAAGGCA	ENSMUST00000057631.12|Sgsm2|ENSMUSG00000038351.15|small G protein signaling modulator 2	ENSMUST00000081799.6|Sgsm2|ENSMUSG00000038351.15|small G protein signaling modulator 2
mm39_v1_chr11_-_117859997_117860018	0.062378754594421215	UAAGGCA	ENSMUST00000054002.4|Socs3|ENSMUSG00000053113.4|suppressor of cytokine signaling 3
mm39_v1_chr7_+_27290969_27290981	0.06222442181221226	UAAGGCA	ENSMUST00000108344.9|Akt2|ENSMUSG00000004056.16|thymoma viral proto-oncogene 2
mm39_v1_chr4_-_3938352_3938401	0.06220249177317053	UAAGGCA	ENSMUST00000003369.10|Plag1|ENSMUSG00000003282.10|pleiomorphic adenoma gene 1
mm39_v1_chr5_+_124767114_124767162	0.06219028000414962	UAAGGCA	ENSMUST00000037865.13|Atp6v0a2|ENSMUSG00000038023.13|ATPase, H+ transporting, lysosomal V0 subunit A2
mm39_v1_chr4_+_152381662_152381684	0.062092165919252214	UAAGGCA	ENSMUST00000048892.14|Icmt|ENSMUSG00000039662.17|isoprenylcysteine carboxyl methyltransferase
mm39_v1_chr12_-_35584968_35585059	0.06200608184217752	UAAGGCA	ENSMUST00000116436.9|Ahr|ENSMUSG00000019256.18|aryl-hydrocarbon receptor
mm39_v1_chr4_+_106173384_106173439	0.06196528130429317	UAAGGCA	ENSMUST00000165709.8|Usp24|ENSMUSG00000028514.16|ubiquitin specific peptidase 24	ENSMUST00000094933.5|Usp24|ENSMUSG00000028514.16|ubiquitin specific peptidase 24
mm39_v1_chr17_-_30107544_30107682	0.06178412853474186	UAAGGCA	ENSMUST00000171691.9|Mdga1|ENSMUSG00000043557.17|MAM domain containing glycosylphosphatidylinositol anchor 1
mm39_v1_chr3_+_121220146_121220188	0.061405677993942	UAAGGCA	ENSMUST00000029773.13|Cnn3|ENSMUSG00000053931.12|calponin 3, acidic
mm39_v1_chr5_-_138153956_138154006	0.06134172337444813	UAAGGCA	ENSMUST00000132318.2|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113	ENSMUST00000049393.15|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113
mm39_v1_chr9_-_21421458_21421548	0.061217264094372024	UAAGGCA	ENSMUST00000213167.2|Tmed1|ENSMUSG00000032180.12|transmembrane p24 trafficking protein 1	ENSMUST00000034698.9|Tmed1|ENSMUSG00000032180.12|transmembrane p24 trafficking protein 1
mm39_v1_chr6_-_31540913_31540924	0.060403043324855445	UAAGGCA	ENSMUST00000026698.8|Podxl|ENSMUSG00000025608.10|podocalyxin-like
mm39_v1_chr14_-_25769457_25769513	0.06024253798870981	UAAGGCA	ENSMUST00000069180.8|Zcchc24|ENSMUSG00000055538.8|zinc finger, CCHC domain containing 24
mm39_v1_chr5_-_21156766_21156824	0.060226730959374926	UAAGGCA	ENSMUST00000036489.10|Rsbn1l|ENSMUSG00000039968.10|round spermatid basic protein 1-like
mm39_v1_chr19_-_5168251_5168350	0.05867357913632862	UAAGGCA	ENSMUST00000113728.8|Klc2|ENSMUSG00000024862.17|kinesin light chain 2	ENSMUST00000113727.8|Klc2|ENSMUSG00000024862.17|kinesin light chain 2	ENSMUST00000025798.13|Klc2|ENSMUSG00000024862.17|kinesin light chain 2
mm39_v1_chr11_-_70111796_70111890	0.05797977400405986	UAAGGCA	ENSMUST00000060010.3|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13	ENSMUST00000190533.2|Slc16a13|ENSMUSG00000044367.8|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm39_v1_chr10_+_20024724_20024760	0.05751449822562307	UAAGGCA	ENSMUST00000116259.5|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7	ENSMUST00000214231.2|Map7|ENSMUSG00000019996.18|microtubule-associated protein 7
mm39_v1_chr9_+_56902172_56902207	0.05748447829339975	UAAGGCA	ENSMUST00000034832.8|Ptpn9|ENSMUSG00000032290.8|protein tyrosine phosphatase, non-receptor type 9
mm39_v1_chr12_-_73160181_73160230	0.056984996018191604	UAAGGCA	ENSMUST00000043208.8|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4	ENSMUST00000175693.3|Six4|ENSMUSG00000034460.10|sine oculis-related homeobox 4
mm39_v1_chr8_-_106553822_106553982	0.056746286243305744	UAAGGCA	ENSMUST00000239468.2|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10	ENSMUST00000041400.6|Ranbp10|ENSMUSG00000037415.8|RAN binding protein 10
mm39_v1_chr3_-_89294430_89294496	0.05647734301884311	UAAGGCA	ENSMUST00000107433.8|Zbtb7b|ENSMUSG00000028042.16|zinc finger and BTB domain containing 7B
mm39_v1_chr17_-_64638887_64638951	0.056388941623541376	UAAGGCA	ENSMUST00000172818.8|Pja2|ENSMUSG00000024083.17|praja ring finger ubiquitin ligase 2
mm39_v1_chrX_-_35909011_35909067	0.05608912109062361	UAAGGCA	ENSMUST00000051906.13|Akap17b|ENSMUSG00000059708.13|A kinase (PRKA) anchor protein 17B
mm39_v1_chr16_+_19959811_19959890	0.05591518554947928	UAAGGCA	ENSMUST00000090052.11|Yeats2|ENSMUSG00000041215.17|YEATS domain containing 2	ENSMUST00000115560.4|Yeats2|ENSMUSG00000041215.17|YEATS domain containing 2
mm39_v1_chr15_+_12205095_12205124	0.05573812065676629	UAAGGCA	ENSMUST00000038172.16|Mtmr12|ENSMUSG00000039458.16|myotubularin related protein 12
mm39_v1_chr4_+_97665843_97665870	0.055718668886349076	UAAGGCA	ENSMUST00000075448.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A	ENSMUST00000092532.13|Nfia|ENSMUSG00000028565.19|nuclear factor I/A
mm39_v1_chr4_+_132366298_132366430	0.055337473794205734	UAAGGCA	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr6_+_65019574_65019651	0.0551227045163322	UAAGGCA	ENSMUST00000031984.9|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	ENSMUST00000205118.3|Smarcad1|ENSMUSG00000029920.10|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm39_v1_chr2_+_121697398_121697478	0.055037498331738564	UAAGGCA	ENSMUST00000110586.10|Golm2|ENSMUSG00000060227.16|golgi membrane protein 2	ENSMUST00000078752.10|Golm2|ENSMUSG00000060227.16|golgi membrane protein 2
mm39_v1_chr5_-_110596352_110596385	0.05463796682113916	UAAGGCA	ENSMUST00000069483.12|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1	ENSMUST00000200293.2|Fbrsl1|ENSMUSG00000043323.18|fibrosin-like 1
mm39_v1_chr8_+_11808349_11808375	0.054233537861996826	UAAGGCA	ENSMUST00000074856.13|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)	ENSMUST00000098938.9|Arhgef7|ENSMUSG00000031511.17|Rho guanine nucleotide exchange factor (GEF7)
mm39_v1_chr4_-_123644091_123644138	0.05381932528932215	UAAGGCA	ENSMUST00000102636.4|Akirin1|ENSMUSG00000023075.10|akirin 1
mm39_v1_chr10_-_13350106_13350185	0.053183132597292314	UAAGGCA	ENSMUST00000105545.12|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr4_-_87951565_87951610	0.05310050169374591	UAAGGCA	ENSMUST00000078090.12|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr8_+_111821262_111821273	0.05296769160230397	UAAGGCA	ENSMUST00000135302.8|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit	ENSMUST00000039333.10|Pdpr|ENSMUSG00000033624.11|pyruvate dehydrogenase phosphatase regulatory subunit
mm39_v1_chr11_-_20282684_20282770	0.05167363261909848	UAAGGCA	ENSMUST00000004634.7|Slc1a4|ENSMUSG00000020142.13|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	ENSMUST00000109594.8|Slc1a4|ENSMUSG00000020142.13|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
mm39_v1_chr12_+_3476857_3476925	0.051672484258487895	UAAGGCA	ENSMUST00000111215.10|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000092003.12|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000144247.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2	ENSMUST00000153102.9|Asxl2|ENSMUSG00000037486.19|ASXL transcriptional regulator 2
mm39_v1_chr11_-_5492175_5492221	0.05141584928108845	UAAGGCA	ENSMUST00000020776.5|Ccdc117|ENSMUSG00000020482.5|coiled-coil domain containing 117
mm39_v1_chr11_+_19874354_19874375	0.05138290584122834	UAAGGCA	ENSMUST00000093299.13|Spred2|ENSMUSG00000045671.18|sprouty-related EVH1 domain containing 2
mm39_v1_chr19_+_56536685_56536716	0.05105366854337769	UAAGGCA	ENSMUST00000071423.7|Nhlrc2|ENSMUSG00000025078.10|NHL repeat containing 2
mm39_v1_chr18_-_10030017_10030146	0.05089788728207663	UAAGGCA	ENSMUST00000116669.2|Usp14|ENSMUSG00000047879.18|ubiquitin specific peptidase 14	ENSMUST00000092096.14|Usp14|ENSMUSG00000047879.18|ubiquitin specific peptidase 14
mm39_v1_chr8_+_89423645_89423705	0.05002180036131726	UAAGGCA	ENSMUST00000043526.15|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase	ENSMUST00000211554.2|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase	ENSMUST00000209532.2|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase	ENSMUST00000209559.2|Cyld|ENSMUSG00000036712.16|CYLD lysine 63 deubiquitinase
mm39_v1_chr2_+_76236870_76236936	0.04979846582947779	UAAGGCA	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr9_-_62719208_62719229	0.049683346392602544	UAAGGCA	ENSMUST00000034775.10|Fem1b|ENSMUSG00000032244.10|fem 1 homolog b
mm39_v1_chr1_-_165462020_165462110	0.04954703469315717	UAAGGCA	ENSMUST00000194437.6|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000068705.13|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000111435.9|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1	ENSMUST00000193023.2|Mpzl1|ENSMUSG00000026566.16|myelin protein zero-like 1
mm39_v1_chr7_-_121620366_121620445	0.04912791259980681	UAAGGCA	ENSMUST00000033160.15|Gga2|ENSMUSG00000030872.15|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm39_v1_chr9_+_96078340_96078406	0.04863402450495272	UAAGGCA	ENSMUST00000034982.16|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188008.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000188750.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2	ENSMUST00000185644.7|Tfdp2|ENSMUSG00000032411.16|transcription factor Dp 2
mm39_v1_chr1_-_157240138_157240191	0.04850473366088592	UAAGGCA	ENSMUST00000078308.13|Rasal2|ENSMUSG00000070565.12|RAS protein activator like 2
mm39_v1_chr10_+_69932930_69933066	0.04826999097302647	UAAGGCA	ENSMUST00000147545.8|Ccdc6|ENSMUSG00000048701.14|coiled-coil domain containing 6
mm39_v1_chr8_-_103512274_103512408	0.04806451417052389	UAAGGCA	ENSMUST00000075190.5|Cdh11|ENSMUSG00000031673.7|cadherin 11
mm39_v1_chr9_+_45749869_45749892	0.047868089270866165	UAAGGCA	ENSMUST00000078111.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1	ENSMUST00000034591.11|Bace1|ENSMUSG00000032086.13|beta-site APP cleaving enzyme 1
mm39_v1_chr3_+_32490300_32490300	0.04772077782129443	UAAGGCA	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr5_+_141227245_141227298	0.047334209127154296	UAAGGCA	ENSMUST00000085774.11|Sdk1|ENSMUSG00000039683.17|sidekick cell adhesion molecule 1
mm39_v1_chr12_+_111132779_111132832	0.04605898864318272	UAAGGCA	ENSMUST00000117269.8|Traf3|ENSMUSG00000021277.17|TNF receptor-associated factor 3
mm39_v1_chr7_+_108610032_108610042	0.04572233985829369	UAAGGCA	ENSMUST00000033341.12|Tub|ENSMUSG00000031028.15|tubby bipartite transcription factor
mm39_v1_chr4_+_106418224_106418235	0.0455634484919524	UAAGGCA	ENSMUST00000047973.4|Dhcr24|ENSMUSG00000034926.4|24-dehydrocholesterol reductase
mm39_v1_chr3_+_51323383_51323465	0.04551181261802257	UAAGGCA	ENSMUST00000029303.13|Naa15|ENSMUSG00000063273.12|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm39_v1_chr15_+_25622611_25622644	0.04526193767152042	UAAGGCA	ENSMUST00000110457.8|Myo10|ENSMUSG00000022272.18|myosin X	ENSMUST00000137601.8|Myo10|ENSMUSG00000022272.18|myosin X
mm39_v1_chr18_-_77652820_77652858	0.0450359710279255	UAAGGCA	ENSMUST00000026494.14|Rnf165|ENSMUSG00000025427.16|ring finger protein 165	ENSMUST00000182024.2|Rnf165|ENSMUSG00000025427.16|ring finger protein 165
mm39_v1_chr12_-_4891435_4891612	0.044549662081984034	UAAGGCA	ENSMUST00000219880.2|Fkbp1b|ENSMUSG00000020635.9|FK506 binding protein 1b	ENSMUST00000020964.7|Fkbp1b|ENSMUSG00000020635.9|FK506 binding protein 1b
mm39_v1_chr2_+_119727689_119727786	0.044230560961008976	UAAGGCA	ENSMUST00000046717.13|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000079934.12|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110774.8|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000110773.9|Mga|ENSMUSG00000033943.16|MAX gene associated	ENSMUST00000156510.2|Mga|ENSMUSG00000033943.16|MAX gene associated
mm39_v1_chr15_-_53765869_53765926	0.043266979924778834	UAAGGCA	ENSMUST00000078673.14|Samd12|ENSMUSG00000058656.14|sterile alpha motif domain containing 12
mm39_v1_chr11_+_72580823_72580841	0.04321653124595698	UAAGGCA	ENSMUST00000155998.2|Ankfy1|ENSMUSG00000020790.15|ankyrin repeat and FYVE domain containing 1
mm39_v1_chr1_+_178014983_178015280	0.04286981785293167	UAAGGCA	ENSMUST00000161075.8|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2	ENSMUST00000027783.14|Desi2|ENSMUSG00000026502.14|desumoylating isopeptidase 2
mm39_v1_chr1_-_171854818_171854880	0.042815962514212935	UAAGGCA	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr8_+_75940572_75940572	0.04233886832356773	UAAGGCA	ENSMUST00000139848.8|Rasd2|ENSMUSG00000034472.14|RASD family, member 2
mm39_v1_chr2_-_150510116_150510178	0.04227280427789125	UAAGGCA	ENSMUST00000028944.4|Acss1|ENSMUSG00000027452.12|acyl-CoA synthetase short-chain family member 1
mm39_v1_chr12_+_111780604_111780678	0.04207159386851086	UAAGGCA	ENSMUST00000021714.9|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21	ENSMUST00000223211.2|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21	ENSMUST00000222843.2|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21	ENSMUST00000221375.2|Zfyve21|ENSMUSG00000021286.9|zinc finger, FYVE domain containing 21
mm39_v1_chrX_-_104973003_104973014	0.041397571235936736	UAAGGCA	ENSMUST00000130980.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler	ENSMUST00000113573.8|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr10_-_110845860_110845927	0.04118226392249719	UAAGGCA	ENSMUST00000041723.15|Zdhhc17|ENSMUSG00000035798.15|zinc finger, DHHC domain containing 17
mm39_v1_chr9_+_21077010_21077058	0.041172219857160165	UAAGGCA	ENSMUST00000039413.15|Pde4a|ENSMUSG00000032177.18|phosphodiesterase 4A, cAMP specific
mm39_v1_chr10_+_58230183_58230202	0.04116897212244145	UAAGGCA	ENSMUST00000020077.11|Lims1|ENSMUSG00000019920.19|LIM and senescent cell antigen-like domains 1
mm39_v1_chr13_-_99653045_99653092	0.040889753932532504	UAAGGCA	ENSMUST00000064762.6|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr2_+_30254239_30254316	0.04078817825639238	UAAGGCA	ENSMUST00000077977.14|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000140075.9|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000142801.8|Miga2|ENSMUSG00000026858.19|mitoguardin 2	ENSMUST00000100214.10|Miga2|ENSMUSG00000026858.19|mitoguardin 2
mm39_v1_chr6_+_143112936_143113026	0.04066319032991088	UAAGGCA	ENSMUST00000204947.3|Etnk1|ENSMUSG00000030275.7|ethanolamine kinase 1	ENSMUST00000032413.7|Etnk1|ENSMUSG00000030275.7|ethanolamine kinase 1	ENSMUST00000205256.2|Etnk1|ENSMUSG00000030275.7|ethanolamine kinase 1
mm39_v1_chr18_+_57487800_57487869	0.04057649117611395	UAAGGCA	ENSMUST00000025490.10|Prrc1|ENSMUSG00000024594.10|proline-rich coiled-coil 1
mm39_v1_chr4_+_32982981_32983155	0.0401148803005538	UAAGGCA	ENSMUST00000098190.10|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D	ENSMUST00000029946.14|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D
mm39_v1_chr2_+_128907854_128907915	0.03991931489328632	UAAGGCA	ENSMUST00000035812.14|Ttl|ENSMUSG00000027394.14|tubulin tyrosine ligase
mm39_v1_chr14_-_52258158_52258196	0.03972171826975895	UAAGGCA	ENSMUST00000228580.2|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219	ENSMUST00000226554.2|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219	ENSMUST00000067549.15|Zfp219|ENSMUSG00000049295.18|zinc finger protein 219
mm39_v1_chr12_+_80837284_80837348	0.0393719701180398	UAAGGCA	ENSMUST00000220238.2|Susd6|ENSMUSG00000021133.10|sushi domain containing 6	ENSMUST00000068519.7|Susd6|ENSMUSG00000021133.10|sushi domain containing 6
mm39_v1_chr10_-_75353157_75353215	0.03918749120682015	UAAGGCA	ENSMUST00000039796.14|Gucd1|ENSMUSG00000033416.16|guanylyl cyclase domain containing 1
mm39_v1_chr4_-_41569500_41569551	0.03911892422656644	UAAGGCA	ENSMUST00000108049.9|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108052.10|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A	ENSMUST00000108050.2|Fam219a|ENSMUSG00000028439.15|family with sequence similarity 219, member A
mm39_v1_chr12_-_104718159_104718211	0.03890973248140747	UAAGGCA	ENSMUST00000041987.7|Dicer1|ENSMUSG00000041415.11|dicer 1, ribonuclease type III
mm39_v1_chr4_-_34882917_34882964	0.03838483047148098	UAAGGCA	ENSMUST00000098163.9|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292	ENSMUST00000047950.6|Zfp292|ENSMUSG00000039967.15|zinc finger protein 292
mm39_v1_chr5_-_29583300_29583399	0.038347330663251376	UAAGGCA	ENSMUST00000196321.5|Lmbr1|ENSMUSG00000010721.16|limb region 1	ENSMUST00000200564.5|Lmbr1|ENSMUSG00000010721.16|limb region 1	ENSMUST00000055195.11|Lmbr1|ENSMUSG00000010721.16|limb region 1	ENSMUST00000198105.5|Lmbr1|ENSMUSG00000010721.16|limb region 1	ENSMUST00000179191.6|Lmbr1|ENSMUSG00000010721.16|limb region 1
mm39_v1_chr5_-_92457862_92457883	0.03794724471091756	UAAGGCA	ENSMUST00000031364.5|Sdad1|ENSMUSG00000029415.5|SDA1 domain containing 1
mm39_v1_chr7_+_125871761_125871791	0.03784846041679328	UAAGGCA	ENSMUST00000056028.11|Sbk1|ENSMUSG00000042978.12|SH3-binding kinase 1
mm39_v1_chr11_+_44508137_44508169	0.03778682868352484	UAAGGCA	ENSMUST00000109268.2|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000101326.10|Ebf1|ENSMUSG00000057098.15|early B cell factor 1	ENSMUST00000081265.12|Ebf1|ENSMUSG00000057098.15|early B cell factor 1
mm39_v1_chr18_-_35064906_35065066	0.03763175289070137	UAAGGCA	ENSMUST00000025218.8|Etf1|ENSMUSG00000024360.9|eukaryotic translation termination factor 1
mm39_v1_chr10_-_118705029_118705091	0.03733301934304647	UAAGGCA	ENSMUST00000004281.10|Dyrk2|ENSMUSG00000028630.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm39_v1_chr9_+_44516140_44516218	0.03697635153524	UAAGGCA	ENSMUST00000170489.2|Ddx6|ENSMUSG00000032097.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	ENSMUST00000217034.2|Ddx6|ENSMUSG00000032097.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm39_v1_chr12_+_80690985_80691023	0.03680495274297565	UAAGGCA	ENSMUST00000219405.2|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9	ENSMUST00000085245.7|Slc39a9|ENSMUSG00000048833.10|solute carrier family 39 (zinc transporter), member 9
mm39_v1_chr1_+_138891447_138891539	0.036692774406978226	UAAGGCA	ENSMUST00000168527.8|Dennd1b|ENSMUSG00000056268.16|DENN/MADD domain containing 1B
mm39_v1_chr1_-_92107971_92108063	0.0365776886405062	UAAGGCA	ENSMUST00000186002.3|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4	ENSMUST00000097644.9|Hdac4|ENSMUSG00000026313.17|histone deacetylase 4
mm39_v1_chr13_+_38529062_38529117	0.03653997532342887	UAAGGCA	ENSMUST00000171970.3|Bmp6|ENSMUSG00000039004.7|bone morphogenetic protein 6
mm39_v1_chr17_+_66090336_66090594	0.036500970009085434	UAAGGCA	ENSMUST00000073104.11|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000160664.8|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1	ENSMUST00000162272.2|Ppp4r1|ENSMUSG00000061950.18|protein phosphatase 4, regulatory subunit 1
mm39_v1_chr16_+_58490625_58490726	0.03647948002453523	UAAGGCA	ENSMUST00000060077.7|Cpox|ENSMUSG00000022742.7|coproporphyrinogen oxidase
mm39_v1_chr11_+_115272732_115272759	0.03642546620111593	UAAGGCA	ENSMUST00000053288.6|Cdr2l|ENSMUSG00000050910.6|cerebellar degeneration-related protein 2-like
mm39_v1_chr17_-_46985181_46985206	0.03633831658136253	UAAGGCA	ENSMUST00000024766.7|Rrp36|ENSMUSG00000023971.10|ribosomal RNA processing 36
mm39_v1_chr13_+_96679233_96679283	0.035844644131638785	UAAGGCA	ENSMUST00000077672.12|Cert1|ENSMUSG00000021669.16|ceramide transporter 1	ENSMUST00000109444.3|Cert1|ENSMUSG00000021669.16|ceramide transporter 1
mm39_v1_chr6_-_87788753_87788784	0.03566688695920929	UAAGGCA	ENSMUST00000078647.11|Rab43|ENSMUSG00000030055.17|RAB43, member RAS oncogene family	ENSMUST00000032135.6|Rab43|ENSMUSG00000030055.17|RAB43, member RAS oncogene family
mm39_v1_chr8_+_71725332_71725429	0.035585991368022096	UAAGGCA	ENSMUST00000212935.2|Myo9b|ENSMUSG00000004677.18|myosin IXb	ENSMUST00000170242.8|Myo9b|ENSMUSG00000004677.18|myosin IXb	ENSMUST00000071935.7|Myo9b|ENSMUSG00000004677.18|myosin IXb	ENSMUST00000168839.9|Myo9b|ENSMUSG00000004677.18|myosin IXb
mm39_v1_chr9_-_59393893_59393919	0.03548445305999074	UAAGGCA	ENSMUST00000171975.8|Arih1|ENSMUSG00000025234.12|ariadne RBR E3 ubiquitin protein ligase 1
mm39_v1_chrX_-_105055486_105055512	0.035283154487308385	UAAGGCA	ENSMUST00000238718.2|Magt1|ENSMUSG00000031232.18|magnesium transporter 1	ENSMUST00000033583.14|Magt1|ENSMUSG00000031232.18|magnesium transporter 1	ENSMUST00000151689.9|Magt1|ENSMUSG00000031232.18|magnesium transporter 1
mm39_v1_chr12_+_65083093_65083132	0.03526351877330448	UAAGGCA	ENSMUST00000120580.8|Prpf39|ENSMUSG00000035597.20|pre-mRNA processing factor 39
mm39_v1_chr17_+_69463786_69463845	0.035215409095538414	UAAGGCA	ENSMUST00000112680.8|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000080208.7|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3	ENSMUST00000225977.2|Epb41l3|ENSMUSG00000024044.20|erythrocyte membrane protein band 4.1 like 3
mm39_v1_chr16_+_42727926_42728047	0.0350076871927358	UAAGGCA	ENSMUST00000151244.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20	ENSMUST00000114694.9|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr9_+_43978290_43978319	0.0344957294123469	UAAGGCA	ENSMUST00000034508.14|Usp2|ENSMUSG00000032010.16|ubiquitin specific peptidase 2
mm39_v1_chr12_+_35097179_35097230	0.03438851370288188	UAAGGCA	ENSMUST00000163677.3|Snx13|ENSMUSG00000020590.17|sorting nexin 13	ENSMUST00000048519.17|Snx13|ENSMUSG00000020590.17|sorting nexin 13
mm39_v1_chr12_-_85386120_85386169	0.03437718807191618	UAAGGCA	ENSMUST00000040992.8|Nek9|ENSMUSG00000034290.10|NIMA (never in mitosis gene a)-related expressed kinase 9
mm39_v1_chr14_+_4230569_4230642	0.034170030954585595	UAAGGCA	ENSMUST00000090543.6|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr3_-_122778052_122778163	0.03363490689007108	UAAGGCA	ENSMUST00000199401.2|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000197314.5|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000197934.5|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53	ENSMUST00000090379.7|Usp53|ENSMUSG00000039701.12|ubiquitin specific peptidase 53
mm39_v1_chr16_+_94171477_94171682	0.03348042857809437	UAAGGCA	ENSMUST00000117648.9|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000147352.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000150346.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000155692.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000153988.9|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000139513.9|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000141856.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000152117.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000150097.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000122895.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000151770.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000231569.2|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000147046.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000149885.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000127667.8|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000119131.3|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3	ENSMUST00000145883.2|Ttc3|ENSMUSG00000040785.20|tetratricopeptide repeat domain 3
mm39_v1_chr6_-_112924205_112924239	0.033288437967636586	UAAGGCA	ENSMUST00000088373.11|Srgap3|ENSMUSG00000030257.17|SLIT-ROBO Rho GTPase activating protein 3
mm39_v1_chr14_-_103220066_103220081	0.032891646949578864	UAAGGCA	ENSMUST00000184744.2|Kctd12|ENSMUSG00000098557.2|potassium channel tetramerisation domain containing 12
mm39_v1_chr3_-_107603778_107603890	0.03284481326132655	UAAGGCA	ENSMUST00000029490.15|Ahcyl1|ENSMUSG00000027893.15|S-adenosylhomocysteine hydrolase-like 1
mm39_v1_chr4_-_11322106_11322147	0.03243791319378255	UAAGGCA	ENSMUST00000084892.12|Dpy19l4|ENSMUSG00000045205.17|dpy-19-like 4 (C. elegans)	ENSMUST00000128024.8|Dpy19l4|ENSMUSG00000045205.17|dpy-19-like 4 (C. elegans)
mm39_v1_chr12_+_38830081_38830116	0.03231952314362229	UAAGGCA	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr1_-_189902868_189902942	0.03215749504577157	UAAGGCA	ENSMUST00000177288.4|Prox1|ENSMUSG00000010175.14|prospero homeobox 1	ENSMUST00000175916.8|Prox1|ENSMUSG00000010175.14|prospero homeobox 1
mm39_v1_chr8_+_79235946_79236030	0.03205527057654524	UAAGGCA	ENSMUST00000209490.2|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	ENSMUST00000034111.10|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm39_v1_chr12_+_16860931_16861002	0.032049879055723214	UAAGGCA	ENSMUST00000020908.9|E2f6|ENSMUSG00000057469.9|E2F transcription factor 6
mm39_v1_chr4_-_47474283_47474349	0.031908939772316174	UAAGGCA	ENSMUST00000044148.3|Alg2|ENSMUSG00000039740.7|asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)
mm39_v1_chr18_+_74912268_74912294	0.03152207074448391	UAAGGCA	ENSMUST00000041053.11|Acaa2|ENSMUSG00000036880.11|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)
mm39_v1_chr3_-_102111892_102112009	0.03109904241882403	UAAGGCA	ENSMUST00000029453.13|Vangl1|ENSMUSG00000027860.16|VANGL planar cell polarity 1
mm39_v1_chr6_-_114898739_114898798	0.03108361531148356	UAAGGCA	ENSMUST00000032459.14|Vgll4|ENSMUSG00000030315.16|vestigial like family member 4
mm39_v1_chr19_-_31742427_31742480	0.03104703895478668	UAAGGCA	ENSMUST00000065067.14|Prkg1|ENSMUSG00000052920.17|protein kinase, cGMP-dependent, type I
mm39_v1_chr17_+_30224003_30224074	0.03085075319445733	UAAGGCA	ENSMUST00000057897.10|Zfand3|ENSMUSG00000044477.13|zinc finger, AN1-type domain 3
mm39_v1_chr1_-_165064455_165064524	0.030793876592726588	UAAGGCA	ENSMUST00000043235.8|Tiprl|ENSMUSG00000040843.11|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
mm39_v1_chr14_+_79086492_79086662	0.030576194017145012	UAAGGCA	ENSMUST00000040990.7|Vwa8|ENSMUSG00000058997.9|von Willebrand factor A domain containing 8
mm39_v1_chr6_+_136495784_136495808	0.03042049087595227	UAAGGCA	ENSMUST00000032335.13|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein	ENSMUST00000185724.7|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr12_-_51738666_51738738	0.03015694325820483	UAAGGCA	ENSMUST00000013130.15|Strn3|ENSMUSG00000020954.17|striatin, calmodulin binding protein 3	ENSMUST00000169503.4|Strn3|ENSMUSG00000020954.17|striatin, calmodulin binding protein 3
mm39_v1_chr1_+_127701901_127701975	0.02996138478752504	UAAGGCA	ENSMUST00000112570.2|Ccnt2|ENSMUSG00000026349.15|cyclin T2	ENSMUST00000027587.15|Ccnt2|ENSMUSG00000026349.15|cyclin T2
mm39_v1_chr6_-_35516700_35516823	0.029730701390437	UAAGGCA	ENSMUST00000201026.2|Mtpn|ENSMUSG00000029840.9|myotrophin	ENSMUST00000031866.9|Mtpn|ENSMUSG00000029840.9|myotrophin
mm39_v1_chr18_+_60659257_60659306	0.029596262617669046	UAAGGCA	ENSMUST00000223984.2|Dctn4|ENSMUSG00000024603.9|dynactin 4	ENSMUST00000025505.7|Dctn4|ENSMUSG00000024603.9|dynactin 4	ENSMUST00000223590.2|Dctn4|ENSMUSG00000024603.9|dynactin 4
mm39_v1_chr4_-_151142351_151142444	0.02946972317032511	UAAGGCA	ENSMUST00000030797.4|Vamp3|ENSMUSG00000028955.4|vesicle-associated membrane protein 3
mm39_v1_chr18_+_32296126_32296249	0.02933444133051253	UAAGGCA	ENSMUST00000096575.5|Map3k2|ENSMUSG00000024383.10|mitogen-activated protein kinase kinase kinase 2
mm39_v1_chr19_+_16110176_16110285	0.029194268293662885	UAAGGCA	ENSMUST00000025541.6|Gnaq|ENSMUSG00000024639.6|guanine nucleotide binding protein, alpha q polypeptide
mm39_v1_chr19_+_44551280_44551318	0.029164849523580175	UAAGGCA	ENSMUST00000040455.5|Hif1an|ENSMUSG00000036450.5|hypoxia-inducible factor 1, alpha subunit inhibitor
mm39_v1_chr11_+_112673041_112673059	0.028932895666843896	UAAGGCA	ENSMUST00000000579.3|Sox9|ENSMUSG00000000567.6|SRY (sex determining region Y)-box 9
mm39_v1_chr5_+_64317550_64317564	0.028788500577402027	UAAGGCA	ENSMUST00000101195.9|Tbc1d1|ENSMUSG00000029174.19|TBC1 domain family, member 1
mm39_v1_chr8_-_127201801_127201837	0.028707065304261797	UAAGGCA	ENSMUST00000170518.3|Tarbp1|ENSMUSG00000090290.3|TAR RNA binding protein 1
mm39_v1_chr4_+_6365650_6365688	0.028120491460486566	UAAGGCA	ENSMUST00000029912.11|Sdcbp|ENSMUSG00000028249.16|syndecan binding protein	ENSMUST00000103008.12|Sdcbp|ENSMUSG00000028249.16|syndecan binding protein
mm39_v1_chr4_+_149569717_149569764	0.028050248993485415	UAAGGCA	ENSMUST00000030842.8|Lzic|ENSMUSG00000028990.14|leucine zipper and CTNNBIP1 domain containing
mm39_v1_chr18_-_39623698_39623771	0.028003052674431324	UAAGGCA	ENSMUST00000115567.8|Nr3c1|ENSMUSG00000024431.16|nuclear receptor subfamily 3, group C, member 1
mm39_v1_chrX_+_73372664_73372682	0.027968655805868905	UAAGGCA	ENSMUST00000004326.4|Plxna3|ENSMUSG00000031398.14|plexin A3
mm39_v1_chr2_+_29509704_29509922	0.02773013846516116	UAAGGCA	ENSMUST00000095087.11|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000091146.12|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000102872.11|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000147755.10|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1
mm39_v1_chr4_-_129083335_129083387	0.0275709635504844	UAAGGCA	ENSMUST00000106061.9|S100pbp|ENSMUSG00000040928.16|S100P binding protein	ENSMUST00000072431.13|S100pbp|ENSMUSG00000040928.16|S100P binding protein
mm39_v1_chr13_+_81805941_81805965	0.027064990295354478	UAAGGCA	ENSMUST00000049055.8|Lysmd3|ENSMUSG00000035840.8|LysM, putative peptidoglycan-binding, domain containing 3
mm39_v1_chr8_-_64659004_64659045	0.026847383579040013	UAAGGCA	ENSMUST00000066166.6|Tll1|ENSMUSG00000053626.6|tolloid-like
mm39_v1_chr5_-_113311185_113311217	0.026687463394360907	UAAGGCA	ENSMUST00000050125.9|2900026A02Rik|ENSMUSG00000051339.11|RIKEN cDNA 2900026A02 gene
mm39_v1_chr2_+_121859025_121859137	0.026621853849924264	UAAGGCA	ENSMUST00000028668.8|Eif3j1|ENSMUSG00000027236.9|eukaryotic translation initiation factor 3, subunit J1
mm39_v1_chr12_-_31763859_31763946	0.026433810154513234	UAAGGCA	ENSMUST00000057783.6|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000236002.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000174480.3|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22	ENSMUST00000176710.2|Gpr22|ENSMUSG00000044067.8|G protein-coupled receptor 22
mm39_v1_chr4_-_138641225_138641296	0.02635544206381799	UAAGGCA	ENSMUST00000097830.4|Otud3|ENSMUSG00000041161.9|OTU domain containing 3
mm39_v1_chr6_-_142910094_142910178	0.02595389744710846	UAAGGCA	ENSMUST00000032421.4|St8sia1|ENSMUSG00000030283.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm39_v1_chrX_+_135950334_135950415	0.02572766449340044	UAAGGCA	ENSMUST00000047852.8|Fam199x|ENSMUSG00000042595.8|family with sequence similarity 199, X-linked
mm39_v1_chr4_-_45012287_45012412	0.025630484948384484	UAAGGCA	ENSMUST00000055028.9|Zbtb5|ENSMUSG00000049657.10|zinc finger and BTB domain containing 5	ENSMUST00000180217.2|Zbtb5|ENSMUSG00000049657.10|zinc finger and BTB domain containing 5	ENSMUST00000107817.3|Zbtb5|ENSMUSG00000049657.10|zinc finger and BTB domain containing 5
mm39_v1_chr7_-_63588610_63588704	0.025557417117466855	UAAGGCA	ENSMUST00000063694.10|Klf13|ENSMUSG00000052040.11|Kruppel-like factor 13
mm39_v1_chr13_+_9143995_9144018	0.025060320666133628	UAAGGCA	ENSMUST00000091829.4|Larp4b|ENSMUSG00000033499.15|La ribonucleoprotein domain family, member 4B
mm39_v1_chr11_+_4587733_4587789	0.024884212267207842	UAAGGCA	ENSMUST00000070257.14|Ascc2|ENSMUSG00000020412.17|activating signal cointegrator 1 complex subunit 2	ENSMUST00000109930.3|Ascc2|ENSMUSG00000020412.17|activating signal cointegrator 1 complex subunit 2
mm39_v1_chr10_+_94350687_94350784	0.024853123984462985	UAAGGCA	ENSMUST00000065060.12|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3
mm39_v1_chr14_-_106134253_106134253	0.024683492660418097	UAAGGCA	ENSMUST00000022709.6|Spry2|ENSMUSG00000022114.6|sprouty RTK signaling antagonist 2
mm39_v1_chr13_-_38178059_38178193	0.02466097328044706	UAAGGCA	ENSMUST00000225319.2|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha	ENSMUST00000225246.2|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha	ENSMUST00000021864.8|Ssr1|ENSMUSG00000021427.11|signal sequence receptor, alpha
mm39_v1_chr2_+_129642371_129642493	0.024371186033502416	UAAGGCA	ENSMUST00000165413.9|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35	ENSMUST00000166282.3|Stk35|ENSMUSG00000037885.19|serine/threonine kinase 35
mm39_v1_chr9_+_95441652_95441710	0.02421843467476284	UAAGGCA	ENSMUST00000079597.7|Paqr9|ENSMUSG00000064225.7|progestin and adipoQ receptor family member IX
mm39_v1_chr7_+_113113037_113113053	0.0239746795113959	UAAGGCA	ENSMUST00000033018.15|Far1|ENSMUSG00000030759.17|fatty acyl CoA reductase 1
mm39_v1_chr15_+_6737853_6737883	0.023849394614348596	UAAGGCA	ENSMUST00000061656.8|Rictor|ENSMUSG00000050310.10|RPTOR independent companion of MTOR, complex 2
mm39_v1_chr3_+_30656766_30656802	0.02362061708839006	UAAGGCA	ENSMUST00000047502.9|Mynn|ENSMUSG00000037730.14|myoneurin
mm39_v1_chr6_-_100264439_100264461	0.023492407954130004	UAAGGCA	ENSMUST00000101118.4|Rybp|ENSMUSG00000072872.4|RING1 and YY1 binding protein
mm39_v1_chr1_+_91468409_91468485	0.023427668098530856	UAAGGCA	ENSMUST00000027538.9|Asb1|ENSMUSG00000026311.17|ankyrin repeat and SOCS box-containing 1	ENSMUST00000190484.7|Asb1|ENSMUSG00000026311.17|ankyrin repeat and SOCS box-containing 1	ENSMUST00000186068.2|Asb1|ENSMUSG00000026311.17|ankyrin repeat and SOCS box-containing 1
mm39_v1_chr10_+_126814542_126814618	0.023421464317537128	UAAGGCA	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr2_+_92430043_92430069	0.02318166602543268	UAAGGCA	ENSMUST00000065797.7|Chst1|ENSMUSG00000027221.6|carbohydrate sulfotransferase 1
mm39_v1_chr2_+_4405769_4405786	0.02303774564919406	UAAGGCA	ENSMUST00000075767.14|Frmd4a|ENSMUSG00000026657.18|FERM domain containing 4A
mm39_v1_chr1_+_34840785_34840875	0.02280776117479739	UAAGGCA	ENSMUST00000047664.16|Arhgef4|ENSMUSG00000037509.22|Rho guanine nucleotide exchange factor (GEF) 4	ENSMUST00000211073.2|SMIM39|ENSMUSG00000118272.2|novel protein
mm39_v1_chr1_-_184731672_184731767	0.022700866724782123	UAAGGCA	ENSMUST00000192657.2|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1	ENSMUST00000027929.10|Mark1|ENSMUSG00000026620.12|MAP/microtubule affinity regulating kinase 1
mm39_v1_chr15_-_73056713_73056822	0.0224720093908744	UAAGGCA	ENSMUST00000044113.12|Ago2|ENSMUSG00000036698.12|argonaute RISC catalytic subunit 2
mm39_v1_chrX_-_73129195_73129296	0.022450443945755835	UAAGGCA	ENSMUST00000140399.3|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000123362.8|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000100750.10|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2	ENSMUST00000033770.13|Mecp2|ENSMUSG00000031393.17|methyl CpG binding protein 2
mm39_v1_chr7_-_118091135_118091198	0.022267948941503315	UAAGGCA	ENSMUST00000178344.3|Itpripl2|ENSMUSG00000095115.3|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm39_v1_chr2_-_136958544_136958564	0.022216626140546234	UAAGGCA	ENSMUST00000028735.8|Jag1|ENSMUSG00000027276.8|jagged 1
mm39_v1_chr12_+_112555186_112555276	0.02169781435437749	UAAGGCA	ENSMUST00000101029.4|Inf2|ENSMUSG00000037679.10|inverted formin, FH2 and WH2 domain containing
mm39_v1_chrX_-_135769285_135769504	0.0216851095255981	UAAGGCA	ENSMUST00000058814.7|Rab9b|ENSMUSG00000043463.7|RAB9B, member RAS oncogene family
mm39_v1_chr7_-_28297565_28297610	0.021618956143688695	UAAGGCA	ENSMUST00000040531.9|Samd4b|ENSMUSG00000109336.2|sterile alpha motif domain containing 4B	ENSMUST00000108283.8|Pak4|ENSMUSG00000030602.14|p21 (RAC1) activated kinase 4
mm39_v1_chr8_+_88925821_88925852	0.021376704053863136	UAAGGCA	ENSMUST00000066748.10|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000119033.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000118952.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr5_+_30437579_30437678	0.021248670504721418	UAAGGCA	ENSMUST00000145167.9|Selenoi|ENSMUSG00000075703.17|selenoprotein I
mm39_v1_chrX_-_50106844_50106910	0.020953923021657796	UAAGGCA	ENSMUST00000053593.8|Rap2c|ENSMUSG00000050029.8|RAP2C, member of RAS oncogene family
mm39_v1_chr12_+_24881582_24881657	0.020610795240583936	UAAGGCA	ENSMUST00000221952.2|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000078902.8|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2	ENSMUST00000110942.11|Mboat2|ENSMUSG00000020646.18|membrane bound O-acyltransferase domain containing 2
mm39_v1_chr3_+_37694094_37694229	0.020315844093153023	UAAGGCA	ENSMUST00000108109.8|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1	ENSMUST00000038569.8|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1	ENSMUST00000108107.2|Spry1|ENSMUSG00000037211.13|sprouty RTK signaling antagonist 1
mm39_v1_chr16_+_24212284_24212320	0.02027131867770723	UAAGGCA	ENSMUST00000038053.14|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr4_+_150366028_150366103	0.020206397243699586	UAAGGCA	ENSMUST00000105682.9|Rere|ENSMUSG00000039852.18|arginine glutamic acid dipeptide (RE) repeats
mm39_v1_chr2_-_32321116_32321186	0.020096545698739865	UAAGGCA	ENSMUST00000127961.3|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	ENSMUST00000136361.8|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	ENSMUST00000052119.14|Slc25a25|ENSMUSG00000026819.16|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm39_v1_chr18_-_10182007_10182092	0.01988813137347113	UAAGGCA	ENSMUST00000067947.7|Rock1|ENSMUSG00000024290.10|Rho-associated coiled-coil containing protein kinase 1
mm39_v1_chr2_-_130681978_130682070	0.01981716481956044	UAAGGCA	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr4_+_59626185_59626262	0.019766216134341937	UAAGGCA	ENSMUST00000070150.11|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene	ENSMUST00000052420.7|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene
mm39_v1_chr1_+_171265103_171265134	0.01952235108255548	UAAGGCA	ENSMUST00000043839.5|F11r|ENSMUSG00000038235.5|F11 receptor
mm39_v1_chr3_+_157239988_157240048	0.019386126670467723	UAAGGCA	ENSMUST00000029831.16|Zranb2|ENSMUSG00000028180.19|zinc finger, RAN-binding domain containing 2	ENSMUST00000106057.8|Zranb2|ENSMUSG00000028180.19|zinc finger, RAN-binding domain containing 2
mm39_v1_chr1_-_93406515_93406544	0.01932751481766111	UAAGGCA	ENSMUST00000170883.8|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000189025.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr10_+_53473032_53473100	0.01931932231045489	UAAGGCA	ENSMUST00000020004.8|Asf1a|ENSMUSG00000019857.8|anti-silencing function 1A histone chaperone
mm39_v1_chr11_-_82719850_82719869	0.01930694117087543	UAAGGCA	ENSMUST00000021036.13|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000074515.11|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000103218.3|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein
mm39_v1_chr9_+_65816206_65816302	0.01929789942482248	UAAGGCA	ENSMUST00000205379.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000206048.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000034949.10|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1	ENSMUST00000154589.2|Csnk1g1|ENSMUSG00000032384.17|casein kinase 1, gamma 1
mm39_v1_chr5_-_127694436_127694490	0.019167691659192614	UAAGGCA	ENSMUST00000031367.15|Slc15a4|ENSMUSG00000029416.18|solute carrier family 15, member 4
mm39_v1_chr7_-_128063354_128063397	0.019113691877834512	UAAGGCA	ENSMUST00000106226.9|Tial1|ENSMUSG00000030846.16|Tia1 cytotoxic granule-associated RNA binding protein-like 1	ENSMUST00000106228.8|Tial1|ENSMUSG00000030846.16|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm39_v1_chr2_+_167774247_167774300	0.01881895425518706	UAAGGCA	ENSMUST00000029053.8|Ptpn1|ENSMUSG00000027540.14|protein tyrosine phosphatase, non-receptor type 1
mm39_v1_chr11_+_58221538_58221563	0.01876415151535739	UAAGGCA	ENSMUST00000116376.9|Sh3bp5l|ENSMUSG00000013646.18|SH3 binding domain protein 5 like
mm39_v1_chr8_-_23083751_23083792	0.018547690557935394	UAAGGCA	ENSMUST00000009036.11|Vdac3|ENSMUSG00000008892.13|voltage-dependent anion channel 3
mm39_v1_chr4_-_58912678_58912776	0.018532697157173962	UAAGGCA	ENSMUST00000144512.8|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold	ENSMUST00000102889.10|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold	ENSMUST00000055822.15|Ecpas|ENSMUSG00000050812.19|Ecm29 proteasome adaptor and scaffold
mm39_v1_chr10_+_84938452_84938491	0.0185225983170522	UAAGGCA	ENSMUST00000095383.6|Tmem263|ENSMUSG00000060935.7|transmembrane protein 263
mm39_v1_chr14_+_30673409_30673426	0.018391806976514186	UAAGGCA	ENSMUST00000050171.10|Nek4|ENSMUSG00000021918.11|NIMA (never in mitosis gene a)-related expressed kinase 4
mm39_v1_chr4_-_126362372_126362446	0.0183524223915152	UAAGGCA	ENSMUST00000097888.10|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1	ENSMUST00000239399.2|Ago1|ENSMUSG00000041530.18|argonaute RISC catalytic subunit 1
mm39_v1_chr1_+_176642226_176642226	0.018340572065568043	UAAGGCA	ENSMUST00000056773.15|Sdccag8|ENSMUSG00000026504.18|serologically defined colon cancer antigen 8	ENSMUST00000027785.15|Sdccag8|ENSMUSG00000026504.18|serologically defined colon cancer antigen 8
mm39_v1_chr19_-_44396092_44396173	0.018332533512775365	UAAGGCA	ENSMUST00000041331.4|Scd1|ENSMUSG00000037071.4|stearoyl-Coenzyme A desaturase 1
mm39_v1_chr11_-_102120917_102120950	0.018225764969504888	UAAGGCA	ENSMUST00000008999.12|Hdac5|ENSMUSG00000008855.18|histone deacetylase 5
mm39_v1_chr7_-_132725075_132725107	0.01816504171765156	UAAGGCA	ENSMUST00000163601.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2	ENSMUST00000124096.8|Fgfr2|ENSMUSG00000030849.19|fibroblast growth factor receptor 2	ENSMUST00000033269.15|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr6_+_86381201_86381222	0.01801558012800972	UAAGGCA	ENSMUST00000095754.10|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1	ENSMUST00000095753.9|Tia1|ENSMUSG00000071337.12|cytotoxic granule-associated RNA binding protein 1
mm39_v1_chr10_+_29087602_29087646	0.018011127141444042	UAAGGCA	ENSMUST00000092627.6|9330159F19Rik|ENSMUSG00000004360.10|RIKEN cDNA 9330159F19 gene
mm39_v1_chr11_+_110956980_110957000	0.017648701649205827	UAAGGCA	ENSMUST00000042970.3|Kcnj2|ENSMUSG00000041695.3|potassium inwardly-rectifying channel, subfamily J, member 2
mm39_v1_chr6_-_145195903_145195988	0.01754326658540199	UAAGGCA	ENSMUST00000111710.8|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000155145.2|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000032399.12|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog	ENSMUST00000203147.3|Kras|ENSMUSG00000030265.15|Kirsten rat sarcoma viral oncogene homolog
mm39_v1_chr5_-_66775979_66776056	0.0174265310517128	UAAGGCA	ENSMUST00000162382.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000159786.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000162349.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000087256.12|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000160103.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2	ENSMUST00000160870.8|Apbb2|ENSMUSG00000029207.17|amyloid beta (A4) precursor protein-binding, family B, member 2
mm39_v1_chr12_+_111005768_111005834	0.017336846655748896	UAAGGCA	ENSMUST00000084968.14|Rcor1|ENSMUSG00000037896.18|REST corepressor 1
mm39_v1_chr17_+_45874800_45874899	0.01712451376358522	UAAGGCA	ENSMUST00000224905.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000226086.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000041353.7|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2
mm39_v1_chr6_+_120341055_120341124	0.016588500600127492	UAAGGCA	ENSMUST00000005108.10|Kdm5a|ENSMUSG00000030180.16|lysine (K)-specific demethylase 5A
mm39_v1_chr17_+_28910302_28910316	0.016575496668831777	UAAGGCA	ENSMUST00000004990.14|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000114754.8|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000062694.16|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14
mm39_v1_chr6_-_134543876_134543959	0.016558817971983743	UAAGGCA	ENSMUST00000032322.15|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6	ENSMUST00000126836.4|Lrp6|ENSMUSG00000030201.16|low density lipoprotein receptor-related protein 6
mm39_v1_chr4_+_124696336_124696381	0.016411978664299606	UAAGGCA	ENSMUST00000138807.8|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1	ENSMUST00000030723.3|Mtf1|ENSMUSG00000028890.14|metal response element binding transcription factor 1
mm39_v1_chr3_+_61269059_61269059	0.01628925345283794	UAAGGCA	ENSMUST00000049064.4|Rap2b|ENSMUSG00000036894.4|RAP2B, member of RAS oncogene family
mm39_v1_chr7_+_51528788_51528813	0.0162772239716053	UAAGGCA	ENSMUST00000107591.9|Gas2|ENSMUSG00000030498.16|growth arrest specific 2
mm39_v1_chr18_+_31937129_31937229	0.016184696830918343	UAAGGCA	ENSMUST00000082319.15|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33	ENSMUST00000234957.2|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33	ENSMUST00000025264.8|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33	ENSMUST00000234344.2|Wdr33|ENSMUSG00000024400.17|WD repeat domain 33
mm39_v1_chr5_+_115479284_115479337	0.016056459929833324	UAAGGCA	ENSMUST00000031508.5|Triap1|ENSMUSG00000029535.5|TP53 regulated inhibitor of apoptosis 1
mm39_v1_chr19_+_11943265_11943305	0.015746707141208828	UAAGGCA	ENSMUST00000025590.11|Osbp|ENSMUSG00000024687.12|oxysterol binding protein
mm39_v1_chr15_-_71599664_71599697	0.015734840940312033	UAAGGCA	ENSMUST00000022953.10|Fam135b|ENSMUSG00000036800.9|family with sequence similarity 135, member B
mm39_v1_chr6_-_97594498_97594558	0.01572370415071888	UAAGGCA	ENSMUST00000113355.9|Frmd4b|ENSMUSG00000030064.17|FERM domain containing 4B
mm39_v1_chr7_+_44498640_44498720	0.01560618685996123	UAAGGCA	ENSMUST00000054343.15|Akt1s1|ENSMUSG00000011096.18|AKT1 substrate 1 (proline-rich)	ENSMUST00000142880.3|Akt1s1|ENSMUSG00000011096.18|AKT1 substrate 1 (proline-rich)
mm39_v1_chr14_-_60488922_60488956	0.015384493388736676	UAAGGCA	ENSMUST00000225311.2|Gm49336|ENSMUSG00000114797.2|predicted gene, 49336	ENSMUST00000041905.8|Gm49336|ENSMUSG00000114797.2|predicted gene, 49336
mm39_v1_chr8_+_12807001_12807028	0.01478001424604659	UAAGGCA	ENSMUST00000033818.10|Atp11a|ENSMUSG00000031441.16|ATPase, class VI, type 11A	ENSMUST00000091237.12|Atp11a|ENSMUSG00000031441.16|ATPase, class VI, type 11A
mm39_v1_chr8_-_8711211_8711250	0.014402743894166698	UAAGGCA	ENSMUST00000001319.15|Efnb2|ENSMUSG00000001300.17|ephrin B2
mm39_v1_chr12_-_4957705_4957754	0.014313557495215224	UAAGGCA	ENSMUST00000020962.12|Ubxn2a|ENSMUSG00000020634.13|UBX domain protein 2A
mm39_v1_chr2_-_60793536_60793595	0.014310643674681562	UAAGGCA	ENSMUST00000028347.13|Rbms1|ENSMUSG00000026970.17|RNA binding motif, single stranded interacting protein 1
mm39_v1_chr5_-_121974913_121974927	0.014157678049605738	UAAGGCA	ENSMUST00000040308.14|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3	ENSMUST00000086310.8|Sh2b3|ENSMUSG00000042594.17|SH2B adaptor protein 3
mm39_v1_chrX_+_52001108_52001238	0.014070689466323588	UAAGGCA	ENSMUST00000078944.13|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000101587.10|Phf6|ENSMUSG00000025626.17|PHD finger protein 6	ENSMUST00000154864.4|Phf6|ENSMUSG00000025626.17|PHD finger protein 6
mm39_v1_chr5_+_28522150_28522217	0.013771814113506557	UAAGGCA	ENSMUST00000114884.8|Rbm33|ENSMUSG00000048271.15|RNA binding motif protein 33	ENSMUST00000059644.13|Rbm33|ENSMUSG00000048271.15|RNA binding motif protein 33	ENSMUST00000030920.6|Rbm33|ENSMUSG00000048271.15|RNA binding motif protein 33
mm39_v1_chr3_-_84489783_84489841	0.013737757736822223	UAAGGCA	ENSMUST00000107687.9|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1	ENSMUST00000098990.10|Arfip1|ENSMUSG00000074513.10|ADP-ribosylation factor interacting protein 1
mm39_v1_chr15_+_80118219_80118265	0.01369150258918958	UAAGGCA	ENSMUST00000023048.12|Mief1|ENSMUSG00000022412.15|mitochondrial elongation factor 1
mm39_v1_chr1_-_156501860_156501926	0.013680056717479024	UAAGGCA	ENSMUST00000188964.7|Tor3a|ENSMUSG00000060519.12|torsin family 3, member A	ENSMUST00000190607.2|Tor3a|ENSMUSG00000060519.12|torsin family 3, member A	ENSMUST00000079625.11|Tor3a|ENSMUSG00000060519.12|torsin family 3, member A
mm39_v1_chr5_+_30745447_30745514	0.01353571840263256	UAAGGCA	ENSMUST00000066295.5|Kcnk3|ENSMUSG00000049265.9|potassium channel, subfamily K, member 3
mm39_v1_chr12_+_57277192_57277289	0.013494317452689345	UAAGGCA	ENSMUST00000139049.2|Prps1l3|ENSMUSG00000079104.5|phosphoribosyl pyrophosphate synthetase 1-like 3	ENSMUST00000145003.8|Mipol1|ENSMUSG00000047022.19|mirror-image polydactyly 1	ENSMUST00000123498.8|Mipol1|ENSMUSG00000047022.19|mirror-image polydactyly 1
mm39_v1_chr4_-_62278673_62278749	0.013364288723777762	UAAGGCA	ENSMUST00000084527.10|Fkbp15|ENSMUSG00000066151.13|FK506 binding protein 15	ENSMUST00000098033.10|Fkbp15|ENSMUSG00000066151.13|FK506 binding protein 15
mm39_v1_chr1_+_139349912_139350120	0.013235039469568494	UAAGGCA	ENSMUST00000200243.5|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41	ENSMUST00000039867.10|Zbtb41|ENSMUSG00000033964.13|zinc finger and BTB domain containing 41
mm39_v1_chr4_+_108857803_108857903	0.012938916859596274	UAAGGCA	ENSMUST00000065977.11|Nrd1|ENSMUSG00000053510.13|nardilysin, N-arginine dibasic convertase, NRD convertase 1	ENSMUST00000102736.9|Nrd1|ENSMUSG00000053510.13|nardilysin, N-arginine dibasic convertase, NRD convertase 1
mm39_v1_chr10_+_80330669_80330714	0.012711686301596645	UAAGGCA	ENSMUST00000051773.9|Onecut3|ENSMUSG00000045518.9|one cut domain, family member 3
mm39_v1_chrX_+_132959905_132959988	0.012707147177520797	UAAGGCA	ENSMUST00000113287.8|Cstf2|ENSMUSG00000031256.12|cleavage stimulation factor, 3' pre-RNA subunit 2	ENSMUST00000033609.9|Cstf2|ENSMUSG00000031256.12|cleavage stimulation factor, 3' pre-RNA subunit 2	ENSMUST00000113286.8|Cstf2|ENSMUSG00000031256.12|cleavage stimulation factor, 3' pre-RNA subunit 2
mm39_v1_chr10_+_62816005_62816041	0.012542107840566958	UAAGGCA	ENSMUST00000131718.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000119567.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2	ENSMUST00000122231.8|Rufy2|ENSMUSG00000020070.19|RUN and FYVE domain-containing 2
mm39_v1_chr5_-_98178811_98178821	0.01243445618198521	UAAGGCA	ENSMUST00000031281.14|Antxr2|ENSMUSG00000029338.14|anthrax toxin receptor 2
mm39_v1_chr9_+_7184514_7184572	0.012276411556484975	UAAGGCA	ENSMUST00000215683.2|Dcun1d5|ENSMUSG00000032002.11|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	ENSMUST00000034499.10|Dcun1d5|ENSMUSG00000032002.11|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
mm39_v1_chr18_-_47501897_47501945	0.012270859284236183	UAAGGCA	ENSMUST00000019791.14|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	ENSMUST00000115449.9|Sema6a|ENSMUSG00000019647.17|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm39_v1_chr4_+_49632046_49632110	0.01222909985921823	UAAGGCA	ENSMUST00000156314.8|Rnf20|ENSMUSG00000028309.15|ring finger protein 20	ENSMUST00000167496.8|Rnf20|ENSMUSG00000028309.15|ring finger protein 20	ENSMUST00000029989.11|Rnf20|ENSMUSG00000028309.15|ring finger protein 20	ENSMUST00000146547.2|Rnf20|ENSMUSG00000028309.15|ring finger protein 20
mm39_v1_chr12_+_79075924_79076002	0.012196942517311193	UAAGGCA	ENSMUST00000039928.7|Plekhh1|ENSMUSG00000060716.8|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm39_v1_chr11_+_75541324_75541370	0.012163983073092199	UAAGGCA	ENSMUST00000102505.10|Myo1c|ENSMUSG00000017774.20|myosin IC
mm39_v1_chr8_-_120828211_120828246	0.011996763823076411	UAAGGCA	ENSMUST00000034280.9|Zdhhc7|ENSMUSG00000031823.15|zinc finger, DHHC domain containing 7
mm39_v1_chr2_+_12928852_12928924	0.011943402027991157	UAAGGCA	ENSMUST00000154269.7|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000114796.9|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000134794.8|Pter|ENSMUSG00000026730.13|phosphotriesterase related	ENSMUST00000028063.7|Pter|ENSMUSG00000026730.13|phosphotriesterase related
mm39_v1_chr7_-_112968533_112968602	0.011880966621019624	UAAGGCA	ENSMUST00000047091.14|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10	ENSMUST00000119278.8|Btbd10|ENSMUSG00000038187.15|BTB (POZ) domain containing 10
mm39_v1_chr19_-_16758268_16758340	0.011770389855861835	UAAGGCA	ENSMUST00000068156.8|Vps13a|ENSMUSG00000046230.12|vacuolar protein sorting 13A
mm39_v1_chr12_+_52746158_52746186	0.011591521273821018	UAAGGCA	ENSMUST00000095737.5|Akap6|ENSMUSG00000061603.9|A kinase (PRKA) anchor protein 6
mm39_v1_chr2_-_79287095_79287102	0.011518509626674715	UAAGGCA	ENSMUST00000041099.5|Neurod1|ENSMUSG00000034701.10|neurogenic differentiation 1
mm39_v1_chr1_-_156767123_156767186	0.011495014152153496	UAAGGCA	ENSMUST00000189316.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000190648.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000172057.8|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2	ENSMUST00000191605.7|Ralgps2|ENSMUSG00000026594.15|Ral GEF with PH domain and SH3 binding motif 2
mm39_v1_chr5_-_21087023_21087122	0.01101535889315541	UAAGGCA	ENSMUST00000118174.8|Phtf2|ENSMUSG00000039987.16|putative homeodomain transcription factor 2
mm39_v1_chr1_-_79739469_79739491	0.010961933800851541	UAAGGCA	ENSMUST00000113512.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113513.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113515.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113514.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113510.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000113511.8|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1	ENSMUST00000048820.14|Wdfy1|ENSMUSG00000073643.12|WD repeat and FYVE domain containing 1
mm39_v1_chr6_+_108805594_108805682	0.01081466003870186	UAAGGCA	ENSMUST00000089162.5|Edem1|ENSMUSG00000030104.10|ER degradation enhancer, mannosidase alpha-like 1
mm39_v1_chr14_-_68362284_68362305	0.01078294037864987	UAAGGCA	ENSMUST00000111089.8|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide	ENSMUST00000022638.6|Nefm|ENSMUSG00000022054.12|neurofilament, medium polypeptide
mm39_v1_chr2_+_163916042_163916140	0.010715862306467974	UAAGGCA	ENSMUST00000018353.14|Stk4|ENSMUSG00000018209.16|serine/threonine kinase 4
mm39_v1_chr16_+_43993599_43993760	0.01050618845340162	UAAGGCA	ENSMUST00000119746.8|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000088356.10|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000169582.3|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3
mm39_v1_chr6_+_7844759_7844859	0.010503902860952158	UAAGGCA	ENSMUST00000040159.6|C1galt1|ENSMUSG00000042460.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm39_v1_chr7_+_112278520_112278532	0.01048318834266763	UAAGGCA	ENSMUST00000084705.13|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239442.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000239404.2|Tead1|ENSMUSG00000055320.19|TEA domain family member 1	ENSMUST00000059768.18|Tead1|ENSMUSG00000055320.19|TEA domain family member 1
mm39_v1_chr19_+_47568041_47568164	0.010423390898115163	UAAGGCA	ENSMUST00000026043.12|Slk|ENSMUSG00000025060.16|STE20-like kinase
mm39_v1_chr7_-_65020955_65021041	0.010016471179517967	UAAGGCA	ENSMUST00000102592.10|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr16_+_33005426_33005537	0.009889635629662528	UAAGGCA	ENSMUST00000232100.2|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11	ENSMUST00000232181.2|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11	ENSMUST00000039733.10|Osbpl11|ENSMUSG00000022807.10|oxysterol binding protein-like 11
mm39_v1_chr6_+_113023186_113023330	0.009768310398297807	UAAGGCA	ENSMUST00000032398.15|Thumpd3|ENSMUSG00000030264.15|THUMP domain containing 3	ENSMUST00000155378.2|Thumpd3|ENSMUSG00000030264.15|THUMP domain containing 3
mm39_v1_chr11_+_105975403_105975449	0.00944442927527234	UAAGGCA	ENSMUST00000002044.10|Map3k3|ENSMUSG00000020700.12|mitogen-activated protein kinase kinase kinase 3
mm39_v1_chr6_-_102441628_102441628	0.009264034100515631	UAAGGCA	ENSMUST00000032159.7|Cntn3|ENSMUSG00000030075.11|contactin 3
mm39_v1_chr6_+_120813199_120813218	0.009187830172788052	UAAGGCA	ENSMUST00000009256.4|Bcl2l13|ENSMUSG00000009112.5|BCL2-like 13 (apoptosis facilitator)
mm39_v1_chr6_+_31375670_31375795	0.009058283711279142	UAAGGCA	ENSMUST00000026699.15|Mkln1|ENSMUSG00000025609.16|muskelin 1, intracellular mediator containing kelch motifs
mm39_v1_chr7_-_105049197_105049261	0.008963328704767067	UAAGGCA	ENSMUST00000048079.14|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000118726.8|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000074686.10|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000122327.7|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000179474.9|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2
mm39_v1_chr8_-_122379631_122379652	0.008908021432493076	UAAGGCA	ENSMUST00000046386.5|Zcchc14|ENSMUSG00000061410.7|zinc finger, CCHC domain containing 14
mm39_v1_chr14_+_60502629_60502793	0.008749079364193292	UAAGGCA	ENSMUST00000022563.9|Mtmr6|ENSMUSG00000021987.10|myotubularin related protein 6	ENSMUST00000224366.2|Mtmr6|ENSMUSG00000021987.10|myotubularin related protein 6
mm39_v1_chr1_+_155911136_155911177	0.008686555622938411	UAAGGCA	ENSMUST00000111757.10|Tor1aip2|ENSMUSG00000050565.17|torsin A interacting protein 2
mm39_v1_chr5_+_100994230_100994377	0.00867366918968778	UAAGGCA	ENSMUST00000092990.4|Gpat3|ENSMUSG00000029314.15|glycerol-3-phosphate acyltransferase 3	ENSMUST00000145612.2|Gpat3|ENSMUSG00000029314.15|glycerol-3-phosphate acyltransferase 3
mm39_v1_chr15_+_88960260_88960308	0.008525313581001446	UAAGGCA	ENSMUST00000169891.8|Trabd|ENSMUSG00000015363.14|TraB domain containing
mm39_v1_chr4_+_115641996_115642037	0.00851282198202649	UAAGGCA	ENSMUST00000177280.8|Atpaf1|ENSMUSG00000028710.19|ATP synthase mitochondrial F1 complex assembly factor 1	ENSMUST00000176047.8|Atpaf1|ENSMUSG00000028710.19|ATP synthase mitochondrial F1 complex assembly factor 1
mm39_v1_chr11_+_95603494_95603529	0.008133224646032429	UAAGGCA	ENSMUST00000107717.8|Zfp652|ENSMUSG00000075595.10|zinc finger protein 652
mm39_v1_chr2_-_18397547_18397649	0.008080986095757301	UAAGGCA	ENSMUST00000091418.12|Dnajc1|ENSMUSG00000026740.13|DnaJ heat shock protein family (Hsp40) member C1	ENSMUST00000166495.8|Dnajc1|ENSMUSG00000026740.13|DnaJ heat shock protein family (Hsp40) member C1
mm39_v1_chr10_+_127575407_127575457	0.007944893503494765	UAAGGCA	ENSMUST00000054287.9|Zbtb39|ENSMUSG00000044617.9|zinc finger and BTB domain containing 39
mm39_v1_chr3_-_41037427_41037481	0.007632596163580316	UAAGGCA	ENSMUST00000058578.8|Pgrmc2|ENSMUSG00000049940.8|progesterone receptor membrane component 2
mm39_v1_chr14_+_34542053_34542108	0.00759561917819532	UAAGGCA	ENSMUST00000043349.7|Grid1|ENSMUSG00000041078.8|glutamate receptor, ionotropic, delta 1
mm39_v1_chr3_+_100069697_100069852	0.007550580922243413	UAAGGCA	ENSMUST00000029459.10|Gdap2|ENSMUSG00000027865.11|ganglioside-induced differentiation-associated-protein 2	ENSMUST00000106997.2|Gdap2|ENSMUSG00000027865.11|ganglioside-induced differentiation-associated-protein 2
mm39_v1_chr7_-_126613707_126613793	0.0075135267088062415	UAAGGCA	ENSMUST00000165096.9|Mvp|ENSMUSG00000030681.19|major vault protein
mm39_v1_chr9_+_72952115_72952146	0.0074771246572789265	UAAGGCA	ENSMUST00000184146.8|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family	ENSMUST00000034722.5|Rab27a|ENSMUSG00000032202.12|RAB27A, member RAS oncogene family
mm39_v1_chr17_+_26934617_26934698	0.007466955407120602	UAAGGCA	ENSMUST00000062519.14|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000144221.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000142539.8|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor	ENSMUST00000151681.2|Crebrf|ENSMUSG00000048249.15|CREB3 regulatory factor
mm39_v1_chr11_-_5015275_5015328	0.0073453999666110836	UAAGGCA	ENSMUST00000109895.2|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1	ENSMUST00000152257.2|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1	ENSMUST00000037146.10|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1	ENSMUST00000056649.13|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1
mm39_v1_chr13_-_12121831_12121871	0.007323254285494981	UAAGGCA	ENSMUST00000021750.15|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000170156.3|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac	ENSMUST00000220597.2|Ryr2|ENSMUSG00000021313.17|ryanodine receptor 2, cardiac
mm39_v1_chr14_-_22039543_22039669	0.007121585628788525	UAAGGCA	ENSMUST00000043409.9|Zfp503|ENSMUSG00000039081.11|zinc finger protein 503
mm39_v1_chr5_-_33815760_33815760	0.007119027081672974	UAAGGCA	ENSMUST00000019439.9|Tmem129|ENSMUSG00000019295.9|transmembrane protein 129
mm39_v1_chr2_+_118731860_118731969	0.007055190338623298	UAAGGCA	ENSMUST00000036578.7|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chr2_+_148522943_148523070	0.007002164019791736	UAAGGCA	ENSMUST00000028928.8|Gzf1|ENSMUSG00000027439.10|GDNF-inducible zinc finger protein 1
mm39_v1_chr3_+_107008867_107008883	0.006929377070595778	UAAGGCA	ENSMUST00000038695.6|Kcna2|ENSMUSG00000040724.6|potassium voltage-gated channel, shaker-related subfamily, member 2
mm39_v1_chr11_-_100830183_100830262	0.006827538999138317	UAAGGCA	ENSMUST00000092671.12|Stat3|ENSMUSG00000004040.17|signal transducer and activator of transcription 3	ENSMUST00000103114.8|Stat3|ENSMUSG00000004040.17|signal transducer and activator of transcription 3
mm39_v1_chr10_-_116417333_116417416	0.0066627775256880555	UAAGGCA	ENSMUST00000218744.2|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105267.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000105265.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000167706.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000168036.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000169921.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2	ENSMUST00000020374.6|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr10_+_43354807_43354859	0.006416909529898998	UAAGGCA	ENSMUST00000167488.9|Bend3|ENSMUSG00000038214.16|BEN domain containing 3
mm39_v1_chr1_-_13442658_13442681	0.006290823457004667	UAAGGCA	ENSMUST00000081713.11|Ncoa2|ENSMUSG00000005886.15|nuclear receptor coactivator 2
mm39_v1_chr6_-_13607963_13608099	0.006261962555893794	UAAGGCA	ENSMUST00000031554.9|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168	ENSMUST00000149123.3|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168
mm39_v1_chr2_+_119378178_119378213	0.0062031623371287025	UAAGGCA	ENSMUST00000014221.13|Chp1|ENSMUSG00000014077.14|calcineurin-like EF hand protein 1	ENSMUST00000119172.2|Chp1|ENSMUSG00000014077.14|calcineurin-like EF hand protein 1
mm39_v1_chr8_+_96078886_96078957	0.006085589892371551	UAAGGCA	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr6_-_113717689_113717704	0.0059523360126823915	UAAGGCA	ENSMUST00000032440.6|Sec13|ENSMUSG00000030298.11|SEC13 homolog, nuclear pore and COPII coat complex component
mm39_v1_chr13_-_60325170_60325190	0.005945217710419593	UAAGGCA	ENSMUST00000065086.6|Gas1|ENSMUSG00000052957.9|growth arrest specific 1
mm39_v1_chr11_-_29975916_29976033	0.0058014183048513196	UAAGGCA	ENSMUST00000058902.6|Eml6|ENSMUSG00000044072.15|echinoderm microtubule associated protein like 6
mm39_v1_chr9_-_117081518_117081557	0.0054457501237178615	UAAGGCA	ENSMUST00000111773.10|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein	ENSMUST00000068962.14|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein	ENSMUST00000044901.14|Rbms3|ENSMUSG00000039607.18|RNA binding motif, single stranded interacting protein
mm39_v1_chr4_+_59189239_59189257	0.005434196104470843	UAAGGCA	ENSMUST00000030074.8|Ugcg|ENSMUSG00000028381.9|UDP-glucose ceramide glucosyltransferase
mm39_v1_chr6_-_83752749_83752808	0.0053099104017317955	UAAGGCA	ENSMUST00000014892.8|Tex261|ENSMUSG00000014748.14|testis expressed gene 261
mm39_v1_chr6_-_70769135_70769216	0.005253482989147661	UAAGGCA	ENSMUST00000066134.6|Rpia|ENSMUSG00000053604.6|ribose 5-phosphate isomerase A
mm39_v1_chr2_-_104647041_104647138	0.005096718811952479	UAAGGCA	ENSMUST00000117237.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1	ENSMUST00000231375.2|Qser1|ENSMUSG00000074994.7|glutamine and serine rich 1
mm39_v1_chr2_+_48839505_48839629	0.004875032310500476	UAAGGCA	ENSMUST00000112745.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5	ENSMUST00000112754.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5
mm39_v1_chr4_+_124960465_124960509	0.0047982981976445035	UAAGGCA	ENSMUST00000052183.7|Snip1|ENSMUSG00000050213.7|Smad nuclear interacting protein 1
mm39_v1_chr13_-_81859056_81859132	0.004788120464776973	UAAGGCA	ENSMUST00000161920.2|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G	ENSMUST00000048993.12|Polr3g|ENSMUSG00000035834.12|polymerase (RNA) III (DNA directed) polypeptide G
mm39_v1_chr16_+_78098344_78098384	0.00461203969244459	UAAGGCA	ENSMUST00000232148.2|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor	ENSMUST00000023572.15|Cxadr|ENSMUSG00000022865.15|coxsackie virus and adenovirus receptor
mm39_v1_chr1_+_86510614_86510660	0.004584179916117462	UAAGGCA	ENSMUST00000121534.8|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B	ENSMUST00000149542.2|Cops7b|ENSMUSG00000026240.13|COP9 signalosome subunit 7B
mm39_v1_chr8_-_85414528_85414539	0.0045557875772169465	UAAGGCA	ENSMUST00000001975.6|Nacc1|ENSMUSG00000001910.6|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm39_v1_chr11_-_70578744_70578774	0.00408730345212683	UAAGGCA	ENSMUST00000108545.9|Camta2|ENSMUSG00000040712.17|calmodulin binding transcription activator 2	ENSMUST00000120261.8|Camta2|ENSMUSG00000040712.17|calmodulin binding transcription activator 2
mm39_v1_chr13_+_47276132_47276191	0.00400684567388278	UAAGGCA	ENSMUST00000068891.12|Rnf144b|ENSMUSG00000038068.16|ring finger protein 144B
mm39_v1_chr5_-_25305621_25305655	0.003900192096315206	UAAGGCA	ENSMUST00000030784.14|Prkag2|ENSMUSG00000028944.15|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm39_v1_chr2_+_166647426_166647525	0.0038969260405430036	UAAGGCA	ENSMUST00000099078.10|Arfgef2|ENSMUSG00000074582.11|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm39_v1_chr1_+_82817170_82817239	0.0038773694320118138	UAAGGCA	ENSMUST00000189220.7|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1	ENSMUST00000113444.8|Agfg1|ENSMUSG00000026159.14|ArfGAP with FG repeats 1
mm39_v1_chr3_-_107240989_107240989	0.003642195916690992	UAAGGCA	ENSMUST00000061772.11|Rbm15|ENSMUSG00000048109.11|RNA binding motif protein 15
mm39_v1_chr5_+_111565129_111565308	0.0036143336278397532	UAAGGCA	ENSMUST00000094463.5|Mn1|ENSMUSG00000070576.5|meningioma 1
mm39_v1_chr8_+_117670126_117670163	0.0034598524060515203	UAAGGCA	ENSMUST00000109099.4|Atmin|ENSMUSG00000047388.11|ATM interactor
mm39_v1_chrX_+_40490005_40490181	0.0034151665837807337	UAAGGCA	ENSMUST00000115103.9|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)	ENSMUST00000076349.12|Gria3|ENSMUSG00000001986.17|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm39_v1_chr12_-_65010124_65010159	0.0034006847464375	UAAGGCA	ENSMUST00000021331.9|Klhl28|ENSMUSG00000020948.10|kelch-like 28
mm39_v1_chr2_+_165497157_165497273	0.003389998248338183	UAAGGCA	ENSMUST00000063433.8|Eya2|ENSMUSG00000017897.19|EYA transcriptional coactivator and phosphatase 2
mm39_v1_chr2_-_25982160_25982189	0.0033487497603207216	UAAGGCA	ENSMUST00000114159.9|Nacc2|ENSMUSG00000026932.15|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm39_v1_chr7_-_83801073_83801152	0.0030144150109262953	UAAGGCA	ENSMUST00000117085.2|Abhd17c|ENSMUSG00000038459.11|abhydrolase domain containing 17C
mm39_v1_chr17_-_83939316_83939335	0.002937561180362925	UAAGGCA	ENSMUST00000234613.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3	ENSMUST00000051482.2|Kcng3|ENSMUSG00000045053.3|potassium voltage-gated channel, subfamily G, member 3
mm39_v1_chr10_+_108167973_108168020	0.0029244710140496027	UAAGGCA	ENSMUST00000095313.5|Pawr|ENSMUSG00000035873.9|PRKC, apoptosis, WT1, regulator
mm39_v1_chrX_-_142610371_142610410	0.002729650057297904	UAAGGCA	ENSMUST00000087316.6|Capn6|ENSMUSG00000067276.6|calpain 6
mm39_v1_chr3_-_80710097_80710147	0.0026984263393434087	UAAGGCA	ENSMUST00000075316.10|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)	ENSMUST00000107745.8|Gria2|ENSMUSG00000033981.15|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm39_v1_chr11_+_105480796_105480857	0.0026720179527408195	UAAGGCA	ENSMUST00000168598.8|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	ENSMUST00000100330.10|Tanc2|ENSMUSG00000053580.17|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm39_v1_chr11_-_61745843_61745899	0.0026583098725064887	UAAGGCA	ENSMUST00000004920.4|Ulk2|ENSMUSG00000004798.15|unc-51 like kinase 2
mm39_v1_chr11_-_106679312_106679358	0.0025614816101042085	UAAGGCA	ENSMUST00000021062.12|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chrX_+_55391749_55391775	0.0025206215636193723	UAAGGCA	ENSMUST00000101560.4|Zfp449|ENSMUSG00000073176.5|zinc finger protein 449
mm39_v1_chr2_-_130471891_130471958	0.0023535402140323573	UAAGGCA	ENSMUST00000110262.3|Fastkd5|ENSMUSG00000079043.4|FAST kinase domains 5	ENSMUST00000028761.5|Ubox5|ENSMUSG00000027300.11|U box domain containing 5
mm39_v1_chr10_+_80458511_80458672	0.0022253882830853048	UAAGGCA	ENSMUST00000079773.14|Csnk1g2|ENSMUSG00000003345.17|casein kinase 1, gamma 2
mm39_v1_chr8_+_105897300_105897446	0.0020336732033532923	UAAGGCA	ENSMUST00000052209.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109392.9|Cbfb|ENSMUSG00000031885.15|core binding factor beta	ENSMUST00000109395.8|Cbfb|ENSMUSG00000031885.15|core binding factor beta
mm39_v1_chr1_+_180396478_180396525	0.0019461124270429328	UAAGGCA	ENSMUST00000027777.12|Parp1|ENSMUSG00000026496.12|poly (ADP-ribose) polymerase family, member 1
mm39_v1_chr2_+_153583194_153583214	0.0018545346168834201	UAAGGCA	ENSMUST00000028981.9|Mapre1|ENSMUSG00000027479.15|microtubule-associated protein, RP/EB family, member 1
mm39_v1_chr8_+_93687561_93687672	0.0017287535544116552	UAAGGCA	ENSMUST00000072939.8|Slc6a2|ENSMUSG00000055368.15|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm39_v1_chr6_-_47571901_47571981	0.0011865115038886321	UAAGGCA	ENSMUST00000081721.13|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114618.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit	ENSMUST00000114616.8|Ezh2|ENSMUSG00000029687.17|enhancer of zeste 2 polycomb repressive complex 2 subunit
mm39_v1_chr1_-_36283326_36283401	0.0011032672888526339	UAAGGCA	ENSMUST00000046875.14|Uggt1|ENSMUSG00000037470.15|UDP-glucose glycoprotein glucosyltransferase 1
mm39_v1_chr15_+_85619958_85620010	0.0009292680380610447	UAAGGCA	ENSMUST00000109422.8|Ppara|ENSMUSG00000022383.14|peroxisome proliferator activated receptor alpha
mm39_v1_chr6_+_4903299_4903347	0.0009268105261589532	UAAGGCA	ENSMUST00000035813.9|Ppp1r9a|ENSMUSG00000032827.16|protein phosphatase 1, regulatory subunit 9A
mm39_v1_chr16_-_15412371_15412396	0.0007442683009541657	UAAGGCA	ENSMUST00000115776.2|Ube2v2|ENSMUSG00000022674.16|ubiquitin-conjugating enzyme E2 variant 2	ENSMUST00000115777.10|Ube2v2|ENSMUSG00000022674.16|ubiquitin-conjugating enzyme E2 variant 2
mm39_v1_chr7_-_67022520_67022609	0.0006550366680455126	UAAGGCA	ENSMUST00000156690.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000107476.8|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000076325.12|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000032776.15|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A	ENSMUST00000133074.2|Mef2a|ENSMUSG00000030557.18|myocyte enhancer factor 2A
mm39_v1_chr4_+_99082131_99082172	0.00036826115027034455	UAAGGCA	ENSMUST00000030279.15|Atg4c|ENSMUSG00000028550.16|autophagy related 4C, cysteine peptidase
mm39_v1_chr9_-_4796217_4796267	0.00017893871534878985	UAAGGCA	ENSMUST00000027020.13|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)	ENSMUST00000163309.2|Gria4|ENSMUSG00000025892.17|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm39_v1_chr3_-_32419609_32419840	0.00016612682191418867	UAAGGCA	ENSMUST00000139660.2|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3	ENSMUST00000168566.3|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3	ENSMUST00000029199.11|Zmat3|ENSMUSG00000027663.13|zinc finger matrin type 3
