mm39_v1_chr12_-_45120895_45121089	0.3814690270496986	UGGUCCC	ENSMUST00000120531.8|Stxbp6|ENSMUSG00000046314.17|syntaxin binding protein 6 (amisyn)	ENSMUST00000143376.8|Stxbp6|ENSMUSG00000046314.17|syntaxin binding protein 6 (amisyn)
mm39_v1_chr11_+_68989763_68989811	0.2891787255864708	UGGUCCC	ENSMUST00000021271.14|Per1|ENSMUSG00000020893.18|period circadian clock 1
mm39_v1_chr13_-_40887244_40887313	0.28598692187106345	UGGUCCC	ENSMUST00000110193.9|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
mm39_v1_chr16_-_10131804_10131832	0.2815070545788878	UGGUCCC	ENSMUST00000078357.5|Emp2|ENSMUSG00000022505.10|epithelial membrane protein 2
mm39_v1_chr11_-_50183129_50183191	0.24724191075329024	UGGUCCC	ENSMUST00000059458.5|Maml1|ENSMUSG00000050567.17|mastermind like transcriptional coactivator 1
mm39_v1_chr9_-_48747232_48747262	0.2397843582158018	UGGUCCC	ENSMUST00000093852.5|Zbtb16|ENSMUSG00000066687.6|zinc finger and BTB domain containing 16
mm39_v1_chr5_-_115487005_115487040	0.22333135551734645	UGGUCCC	ENSMUST00000040154.9|Cox6a1|ENSMUSG00000041697.9|cytochrome c oxidase subunit 6A1
mm39_v1_chr9_+_108685555_108685640	0.21801565892600683	UGGUCCC	ENSMUST00000035218.9|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000195323.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain	ENSMUST00000194819.2|Nckipsd|ENSMUSG00000032598.9|NCK interacting protein with SH3 domain
mm39_v1_chr1_+_59952131_59952186	0.1956822169369181	UGGUCCC	ENSMUST00000036540.12|Fam117b|ENSMUSG00000041040.13|family with sequence similarity 117, member B
mm39_v1_chr11_-_51647290_51647445	0.19488243375573638	UGGUCCC	ENSMUST00000109097.9|Sec24a|ENSMUSG00000036391.17|Sec24 related gene family, member A (S. cerevisiae)
mm39_v1_chr3_-_52012462_52012497	0.18979261740126213	UGGUCCC	ENSMUST00000121440.4|Maml3|ENSMUSG00000061143.16|mastermind like transcriptional coactivator 3
mm39_v1_chr5_-_124387812_124387845	0.1824428919528408	UGGUCCC	ENSMUST00000162812.8|Pitpnm2|ENSMUSG00000029406.16|phosphatidylinositol transfer protein, membrane-associated 2
mm39_v1_chr12_-_84265609_84265663	0.18222609418132968	UGGUCCC	ENSMUST00000046266.13|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein	ENSMUST00000220974.2|Mideas|ENSMUSG00000042507.16|mitotic deacetylase associated SANT domain protein
mm39_v1_chr9_-_21003268_21003304	0.1814273009930161	UGGUCCC	ENSMUST00000115487.3|Raver1|ENSMUSG00000010205.12|ribonucleoprotein, PTB-binding 1
mm39_v1_chr4_-_35157405_35157504	0.16881302661117467	UGGUCCC	ENSMUST00000102975.10|Mob3b|ENSMUSG00000073910.11|MOB kinase activator 3B
mm39_v1_chr11_-_18968979_18968990	0.16457434320689285	UGGUCCC	ENSMUST00000144988.8|Meis1|ENSMUSG00000020160.19|Meis homeobox 1
mm39_v1_chr8_-_27664651_27664680	0.15971454708374577	UGGUCCC	ENSMUST00000054212.7|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000033878.14|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000209377.2|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)
mm39_v1_chr4_+_32982981_32983155	0.15779663623281384	UGGUCCC	ENSMUST00000098190.10|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D	ENSMUST00000029946.14|Rragd|ENSMUSG00000028278.15|Ras-related GTP binding D
mm39_v1_chr5_+_124577952_124578061	0.1561958278703206	UGGUCCC	ENSMUST00000059580.11|Kmt5a|ENSMUSG00000049327.18|lysine methyltransferase 5A
mm39_v1_chr7_-_19556612_19556712	0.15594013293180814	UGGUCCC	ENSMUST00000120537.8|Bcl3|ENSMUSG00000053175.18|B cell leukemia/lymphoma 3
mm39_v1_chr4_+_125384481_125384495	0.14822443674508987	UGGUCCC	ENSMUST00000030676.8|Grik3|ENSMUSG00000001985.10|glutamate receptor, ionotropic, kainate 3
mm39_v1_chr11_+_115272732_115272759	0.14757731746081706	UGGUCCC	ENSMUST00000053288.6|Cdr2l|ENSMUSG00000050910.6|cerebellar degeneration-related protein 2-like
mm39_v1_chrX_+_95139639_95139662	0.1437338396490759	UGGUCCC	ENSMUST00000117399.2|Msn|ENSMUSG00000031207.17|moesin
mm39_v1_chr10_+_79690452_79690476	0.1425664260409718	UGGUCCC	ENSMUST00000165704.8|Ptbp1|ENSMUSG00000006498.17|polypyrimidine tract binding protein 1
mm39_v1_chr11_-_86884507_86884538	0.13766900398637005	UGGUCCC	ENSMUST00000018571.5|Ypel2|ENSMUSG00000018427.9|yippee like 2
mm39_v1_chr15_-_103248512_103248527	0.13746059766251756	UGGUCCC	ENSMUST00000168828.3|Zfp385a|ENSMUSG00000000552.11|zinc finger protein 385A
mm39_v1_chr7_+_121666388_121666438	0.13720481366616064	UGGUCCC	ENSMUST00000033158.6|Ubfd1|ENSMUSG00000030870.13|ubiquitin family domain containing 1
mm39_v1_chr3_+_88857929_88857975	0.13698036691346946	UGGUCCC	ENSMUST00000186583.7|Ash1l|ENSMUSG00000028053.14|ASH1 like histone lysine methyltransferase
mm39_v1_chr15_-_81284244_81284294	0.13602296913568257	UGGUCCC	ENSMUST00000172107.8|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13	ENSMUST00000169204.2|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13	ENSMUST00000163382.2|St13|ENSMUSG00000022403.16|suppression of tumorigenicity 13
mm39_v1_chr15_-_77726333_77726375	0.13595398541614373	UGGUCCC	ENSMUST00000016771.13|Myh9|ENSMUSG00000022443.18|myosin, heavy polypeptide 9, non-muscle
mm39_v1_chr17_-_66384017_66384086	0.1359291899558452	UGGUCCC	ENSMUST00000150766.2|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12	ENSMUST00000038116.13|Ankrd12|ENSMUSG00000034647.16|ankyrin repeat domain 12
mm39_v1_chr14_-_55019387_55019411	0.13247456157850995	UGGUCCC	ENSMUST00000022787.8|Slc7a8|ENSMUSG00000022180.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm39_v1_chr15_+_99936516_99936552	0.12848556095023553	UGGUCCC	ENSMUST00000100203.10|Dip2b|ENSMUSG00000023026.17|disco interacting protein 2 homolog B
mm39_v1_chr16_+_43993599_43993760	0.12786819491878965	UGGUCCC	ENSMUST00000119746.8|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000088356.10|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3	ENSMUST00000169582.3|Usf3|ENSMUSG00000068284.15|upstream transcription factor family member 3
mm39_v1_chr6_+_137229427_137229472	0.12476746700192877	UGGUCCC	ENSMUST00000077115.13|Ptpro|ENSMUSG00000030223.15|protein tyrosine phosphatase, receptor type, O
mm39_v1_chr12_-_56581823_56581891	0.12108157513563554	UGGUCCC	ENSMUST00000178477.9|Nkx2-1|ENSMUSG00000001496.16|NK2 homeobox 1
mm39_v1_chr5_+_147367237_147367355	0.12016067979360089	UGGUCCC	ENSMUST00000176600.8|Pan3|ENSMUSG00000029647.16|PAN3 poly(A) specific ribonuclease subunit
mm39_v1_chr18_-_15196612_15196675	0.11991676977893817	UGGUCCC	ENSMUST00000168989.9|Kctd1|ENSMUSG00000036225.16|potassium channel tetramerisation domain containing 1
mm39_v1_chr12_+_12312135_12312158	0.1194201635868431	UGGUCCC	ENSMUST00000069066.14|Cyria|ENSMUSG00000020589.18|CYFIP related Rac1 interactor A
mm39_v1_chr15_-_35155896_35155959	0.11863240159971876	UGGUCCC	ENSMUST00000067033.8|Stk3|ENSMUSG00000022329.16|serine/threonine kinase 3	ENSMUST00000018476.14|Stk3|ENSMUSG00000022329.16|serine/threonine kinase 3
mm39_v1_chr1_-_21149392_21149467	0.11729644949112741	UGGUCCC	ENSMUST00000037998.6|Tram2|ENSMUSG00000041779.6|translocating chain-associating membrane protein 2
mm39_v1_chr17_-_26727437_26727493	0.11616423537158704	UGGUCCC	ENSMUST00000236661.2|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1	ENSMUST00000025025.7|Dusp1|ENSMUSG00000024190.8|dual specificity phosphatase 1
mm39_v1_chrX_+_47430221_47430295	0.11482542866310952	UGGUCCC	ENSMUST00000136348.8|Bcorl1|ENSMUSG00000036959.16|BCL6 co-repressor-like 1
mm39_v1_chr11_+_70453806_70453896	0.11227691606129986	UGGUCCC	ENSMUST00000079244.12|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000102558.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr1_+_6284823_6284907	0.11186068227923822	UGGUCCC	ENSMUST00000027040.13|Rb1cc1|ENSMUSG00000025907.15|RB1-inducible coiled-coil 1
mm39_v1_chr14_+_63075127_63075203	0.11184991599554402	UGGUCCC	ENSMUST00000014691.10|Wdfy2|ENSMUSG00000014547.11|WD repeat and FYVE domain containing 2
mm39_v1_chr13_-_103911092_103911139	0.11093384825508439	UGGUCCC	ENSMUST00000074616.7|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr1_-_60605867_60605938	0.10710263810039104	UGGUCCC	ENSMUST00000027168.12|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000090293.11|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	ENSMUST00000140485.8|Raph1|ENSMUSG00000026014.16|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm39_v1_chr3_-_131138541_131138589	0.10659557898633083	UGGUCCC	ENSMUST00000090246.5|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2	ENSMUST00000126569.2|Sgms2|ENSMUSG00000050931.8|sphingomyelin synthase 2
mm39_v1_chr2_-_153083322_153083346	0.10461883123895234	UGGUCCC	ENSMUST00000056924.14|Plagl2|ENSMUSG00000051413.18|pleiomorphic adenoma gene-like 2
mm39_v1_chr3_-_119576911_119577037	0.10169094329796594	UGGUCCC	ENSMUST00000197464.5|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000198403.2|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2	ENSMUST00000029780.12|Ptbp2|ENSMUSG00000028134.12|polypyrimidine tract binding protein 2
mm39_v1_chr14_-_20718337_20718422	0.10079888169620826	UGGUCCC	ENSMUST00000057090.12|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like	ENSMUST00000117386.2|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like
mm39_v1_chr3_-_89294430_89294496	0.1002145863400076	UGGUCCC	ENSMUST00000107433.8|Zbtb7b|ENSMUSG00000028042.16|zinc finger and BTB domain containing 7B
mm39_v1_chr5_-_34093678_34093757	0.09886051508163943	UGGUCCC	ENSMUST00000030993.8|Nelfa|ENSMUSG00000029111.8|negative elongation factor complex member A, Whsc2
mm39_v1_chr17_+_47747657_47747730	0.09786474201118929	UGGUCCC	ENSMUST00000150819.3|AI661453|ENSMUSG00000034382.15|expressed sequence AI661453
mm39_v1_chr1_+_172327569_172327614	0.0950975966100842	UGGUCCC	ENSMUST00000111230.8|Tagln2|ENSMUSG00000026547.16|transgelin 2
mm39_v1_chr7_-_80052491_80052510	0.09432705932009543	UGGUCCC	ENSMUST00000122232.8|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr5_+_32293145_32293201	0.08911952952031695	UGGUCCC	ENSMUST00000031017.11|Fosl2|ENSMUSG00000029135.11|fos-like antigen 2
mm39_v1_chr2_-_166555678_166555752	0.08890696696153187	UGGUCCC	ENSMUST00000036719.12|Prex1|ENSMUSG00000039621.14|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
mm39_v1_chr3_-_115800989_115801060	0.08854157178412722	UGGUCCC	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr3_-_57755500_57755519	0.08836678725749231	UGGUCCC	ENSMUST00000066882.10|Pfn2|ENSMUSG00000027805.17|profilin 2
mm39_v1_chr14_-_47426863_47426877	0.08733628520991515	UGGUCCC	ENSMUST00000089959.7|Gch1|ENSMUSG00000037580.11|GTP cyclohydrolase 1
mm39_v1_chr7_+_44667377_44667433	0.08453870294359223	UGGUCCC	ENSMUST00000044111.10|Rras|ENSMUSG00000038387.10|related RAS viral (r-ras) oncogene
mm39_v1_chr3_-_95595157_95595228	0.08448636326596055	UGGUCCC	ENSMUST00000015994.4|Adamtsl4|ENSMUSG00000015850.12|ADAMTS-like 4	ENSMUST00000148854.2|Adamtsl4|ENSMUSG00000015850.12|ADAMTS-like 4	ENSMUST00000117782.8|Adamtsl4|ENSMUSG00000015850.12|ADAMTS-like 4
mm39_v1_chr16_+_32151056_32151086	0.08289032836425454	UGGUCCC	ENSMUST00000115151.5|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7	ENSMUST00000232137.2|Ubxn7|ENSMUSG00000053774.10|UBX domain protein 7
mm39_v1_chr2_-_125624754_125624790	0.08107516637113701	UGGUCCC	ENSMUST00000053699.13|Secisbp2l|ENSMUSG00000035093.17|SECIS binding protein 2-like
mm39_v1_chr1_-_54965470_54965561	0.08059858255955074	UGGUCCC	ENSMUST00000179030.8|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44	ENSMUST00000044359.16|Ankrd44|ENSMUSG00000052331.15|ankyrin repeat domain 44
mm39_v1_chr10_-_8761777_8761821	0.07750532713451712	UGGUCCC	ENSMUST00000015449.6|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr11_-_98040377_98040446	0.07581986243807795	UGGUCCC	ENSMUST00000103143.10|Fbxl20|ENSMUSG00000020883.19|F-box and leucine-rich repeat protein 20
mm39_v1_chr16_-_13977084_13977152	0.07472605019203875	UGGUCCC	ENSMUST00000090300.6|Marf1|ENSMUSG00000060657.9|meiosis regulator and mRNA stability 1
mm39_v1_chr17_+_75742881_75742926	0.0733658668103782	UGGUCCC	ENSMUST00000164192.9|Rasgrp3|ENSMUSG00000071042.13|RAS, guanyl releasing protein 3
mm39_v1_chr13_+_89687915_89687915	0.0723002669388431	UGGUCCC	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr9_+_62765362_62765420	0.07216484561215422	UGGUCCC	ENSMUST00000213643.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000034777.14|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000163820.3|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215870.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000214633.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4	ENSMUST00000215968.2|Calml4|ENSMUSG00000032246.15|calmodulin-like 4
mm39_v1_chr4_-_59549314_59549364	0.07037135099237041	UGGUCCC	ENSMUST00000148331.9|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3	ENSMUST00000030076.12|Ptbp3|ENSMUSG00000028382.16|polypyrimidine tract binding protein 3
mm39_v1_chr10_-_79602764_79602786	0.0698070905655235	UGGUCCC	ENSMUST00000047203.9|Rnf126|ENSMUSG00000035890.10|ring finger protein 126
mm39_v1_chr13_+_31990604_31990633	0.06956397784259272	UGGUCCC	ENSMUST00000062292.5|Foxc1|ENSMUSG00000050295.5|forkhead box C1
mm39_v1_chr19_-_10217968_10218125	0.06939430437623292	UGGUCCC	ENSMUST00000189897.2|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000186056.7|Myrf|ENSMUSG00000036098.16|myelin regulatory factor	ENSMUST00000088013.12|Myrf|ENSMUSG00000036098.16|myelin regulatory factor
mm39_v1_chr4_+_42916666_42916713	0.0681391352230221	UGGUCCC	ENSMUST00000132173.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24	ENSMUST00000107975.8|Phf24|ENSMUSG00000036062.14|PHD finger protein 24
mm39_v1_chr5_+_3978266_3978300	0.06628965812418418	UGGUCCC	ENSMUST00000044492.10|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr2_-_164753480_164753677	0.06600689920185115	UGGUCCC	ENSMUST00000041361.14|Zfp335|ENSMUSG00000039834.18|zinc finger protein 335
mm39_v1_chr19_+_57349112_57349136	0.06551662972163733	UGGUCCC	ENSMUST00000036407.6|Fam160b1|ENSMUSG00000033478.6|family with sequence similarity 160, member B1
mm39_v1_chr18_+_53995156_53995215	0.06377891750020123	UGGUCCC	ENSMUST00000069597.8|Csnk1g3|ENSMUSG00000073563.4|casein kinase 1, gamma 3
mm39_v1_chr19_+_29499671_29499682	0.0625266015929591	UGGUCCC	ENSMUST00000043610.13|Ric1|ENSMUSG00000038658.16|RAB6A GEF complex partner 1
mm39_v1_chr11_+_54413673_54413687	0.06221845055417053	UGGUCCC	ENSMUST00000102743.10|Rapgef6|ENSMUSG00000037533.21|Rap guanine nucleotide exchange factor (GEF) 6
mm39_v1_chr5_+_139893698_139893698	0.06221125470315346	UGGUCCC	ENSMUST00000050519.8|Elfn1|ENSMUSG00000048988.9|leucine rich repeat and fibronectin type III, extracellular 1
mm39_v1_chr7_-_116042674_116042698	0.06159168159527372	UGGUCCC	ENSMUST00000170430.3|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha	ENSMUST00000206219.2|Pik3c2a|ENSMUSG00000030660.10|phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
mm39_v1_chr6_-_85310393_85310424	0.05944519242501088	UGGUCCC	ENSMUST00000059034.13|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5	ENSMUST00000045846.12|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5	ENSMUST00000113788.2|Sfxn5|ENSMUSG00000033720.13|sideroflexin 5
mm39_v1_chr6_-_53045546_53045640	0.05909648573731442	UGGUCCC	ENSMUST00000074541.6|Jazf1|ENSMUSG00000063568.12|JAZF zinc finger 1
mm39_v1_chr8_+_108020092_108020118	0.05897003006820924	UGGUCCC	ENSMUST00000169453.8|Nfat5|ENSMUSG00000003847.17|nuclear factor of activated T cells 5
mm39_v1_chr15_-_99355623_99355658	0.05797867721099058	UGGUCCC	ENSMUST00000023747.14|Nckap5l|ENSMUSG00000023009.15|NCK-associated protein 5-like
mm39_v1_chr11_+_68979332_68979380	0.05675759779625852	UGGUCCC	ENSMUST00000117780.2|Vamp2|ENSMUSG00000020894.17|vesicle-associated membrane protein 2
mm39_v1_chr3_+_96079642_96079653	0.05412436396023305	UGGUCCC	ENSMUST00000076372.5|Sf3b4|ENSMUSG00000068856.4|splicing factor 3b, subunit 4
mm39_v1_chr10_+_127928622_127928700	0.05397219295249305	UGGUCCC	ENSMUST00000219072.2|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A	ENSMUST00000045621.9|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A	ENSMUST00000170054.9|Baz2a|ENSMUSG00000040054.18|bromodomain adjacent to zinc finger domain, 2A
mm39_v1_chr17_-_47015928_47016037	0.05311145587325303	UGGUCCC	ENSMUST00000002839.9|Ppp2r5d|ENSMUSG00000059409.10|protein phosphatase 2, regulatory subunit B', delta	ENSMUST00000233988.2|Ppp2r5d|ENSMUSG00000059409.10|protein phosphatase 2, regulatory subunit B', delta
mm39_v1_chr5_+_120569764_120569764	0.05304814192084904	UGGUCCC	ENSMUST00000031591.10|Lhx5|ENSMUSG00000029595.10|LIM homeobox protein 5
mm39_v1_chr9_-_85209162_85209183	0.052843712449310846	UGGUCCC	ENSMUST00000034802.15|Tent5a|ENSMUSG00000032265.15|terminal nucleotidyltransferase 5A
mm39_v1_chr14_-_105414294_105414361	0.05239228133990275	UGGUCCC	ENSMUST00000163545.8|Rbm26|ENSMUSG00000022119.16|RNA binding motif protein 26
mm39_v1_chr12_+_84161095_84161165	0.0522431791622709	UGGUCCC	ENSMUST00000123491.8|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000046340.9|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1	ENSMUST00000136159.2|Dnal1|ENSMUSG00000042523.13|dynein, axonemal, light chain 1
mm39_v1_chr7_+_101619019_101619047	0.051674825931775595	UGGUCCC	ENSMUST00000084852.13|Numa1|ENSMUSG00000066306.14|nuclear mitotic apparatus protein 1
mm39_v1_chr9_-_113855776_113855833	0.050439807075465304	UGGUCCC	ENSMUST00000035090.14|Fbxl2|ENSMUSG00000032507.16|F-box and leucine-rich repeat protein 2
mm39_v1_chr17_-_48235560_48235577	0.05010742452394087	UGGUCCC	ENSMUST00000113265.8|Foxp4|ENSMUSG00000023991.17|forkhead box P4
mm39_v1_chr7_+_131568167_131568198	0.04810357853152293	UGGUCCC	ENSMUST00000045840.5|Gpr26|ENSMUSG00000040125.5|G protein-coupled receptor 26
mm39_v1_chr9_-_108067552_108067617	0.04786565608173645	UGGUCCC	ENSMUST00000035208.14|Bsn|ENSMUSG00000032589.15|bassoon
mm39_v1_chr5_-_140634773_140634807	0.047401102503354046	UGGUCCC	ENSMUST00000197452.5|Ttyh3|ENSMUSG00000036565.8|tweety family member 3	ENSMUST00000042661.8|Ttyh3|ENSMUSG00000036565.8|tweety family member 3
mm39_v1_chr4_+_132857816_132857901	0.04734831414108885	UGGUCCC	ENSMUST00000084241.12|Wasf2|ENSMUSG00000028868.14|WASP family, member 2	ENSMUST00000138831.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr10_+_41685931_41685959	0.04668153667586155	UGGUCCC	ENSMUST00000099931.11|Sesn1|ENSMUSG00000038332.14|sestrin 1
mm39_v1_chr9_+_45029080_45029179	0.04622798073600884	UGGUCCC	ENSMUST00000170998.9|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta	ENSMUST00000093855.4|Scn2b|ENSMUSG00000070304.13|sodium channel, voltage-gated, type II, beta
mm39_v1_chr2_-_174314741_174314874	0.04568560112112891	UGGUCCC	ENSMUST00000016401.15|Prelid3b|ENSMUSG00000016257.16|PRELI domain containing 3B
mm39_v1_chr19_-_6957789_6957869	0.04346327168406786	UGGUCCC	ENSMUST00000070878.9|Fkbp2|ENSMUSG00000056629.17|FK506 binding protein 2	ENSMUST00000177752.9|Fkbp2|ENSMUSG00000056629.17|FK506 binding protein 2
mm39_v1_chrX_+_100892981_100892998	0.04272877046121897	UGGUCCC	ENSMUST00000124279.6|Nhsl2|ENSMUSG00000079481.12|NHS-like 2	ENSMUST00000101339.8|Nhsl2|ENSMUSG00000079481.12|NHS-like 2
mm39_v1_chr11_-_107685383_107685555	0.04120627833408033	UGGUCCC	ENSMUST00000021066.4|Cacng4|ENSMUSG00000020723.4|calcium channel, voltage-dependent, gamma subunit 4
mm39_v1_chr10_+_22520910_22521008	0.04079730670380467	UGGUCCC	ENSMUST00000042261.5|Slc2a12|ENSMUSG00000037490.6|solute carrier family 2 (facilitated glucose transporter), member 12
mm39_v1_chr9_+_66065488_66065553	0.040724763569558065	UGGUCCC	ENSMUST00000034944.9|Dapk2|ENSMUSG00000032380.10|death-associated protein kinase 2	ENSMUST00000238682.2|Dapk2|ENSMUSG00000032380.10|death-associated protein kinase 2
mm39_v1_chr9_+_59485475_59485620	0.03982002896736259	UGGUCCC	ENSMUST00000118549.8|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6	ENSMUST00000034840.10|Celf6|ENSMUSG00000032297.12|CUGBP, Elav-like family member 6
mm39_v1_chr10_+_27950809_27950870	0.039046821414495	UGGUCCC	ENSMUST00000166468.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218359.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K	ENSMUST00000218276.2|Ptprk|ENSMUSG00000019889.11|protein tyrosine phosphatase, receptor type, K
mm39_v1_chr11_-_69260203_69260242	0.0383731131841585	UGGUCCC	ENSMUST00000092971.13|Chd3|ENSMUSG00000018474.19|chromodomain helicase DNA binding protein 3	ENSMUST00000108661.8|Chd3|ENSMUSG00000018474.19|chromodomain helicase DNA binding protein 3
mm39_v1_chr8_-_4375320_4375413	0.03782105015765381	UGGUCCC	ENSMUST00000098950.6|Elavl1|ENSMUSG00000040028.11|ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
mm39_v1_chr8_+_41315419_41315472	0.03637827000004537	UGGUCCC	ENSMUST00000098816.10|Slc7a2|ENSMUSG00000031596.16|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	ENSMUST00000057784.15|Slc7a2|ENSMUSG00000031596.16|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
mm39_v1_chr17_-_46798566_46798608	0.03624793254386539	UGGUCCC	ENSMUST00000047034.9|Ttbk1|ENSMUSG00000015599.10|tau tubulin kinase 1
mm39_v1_chr11_-_120472379_120472452	0.03596589777314481	UGGUCCC	ENSMUST00000106197.10|Arhgdia|ENSMUSG00000025132.14|Rho GDP dissociation inhibitor (GDI) alpha
mm39_v1_chr13_-_54835508_54835623	0.03577535467684946	UGGUCCC	ENSMUST00000177950.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44	ENSMUST00000146931.8|Rnf44|ENSMUSG00000034928.17|ring finger protein 44
mm39_v1_chr9_-_56835633_56835676	0.03555365923699917	UGGUCCC	ENSMUST00000050916.7|Snx33|ENSMUSG00000032733.7|sorting nexin 33
mm39_v1_chr8_+_26008773_26008788	0.03537874180986609	UGGUCCC	ENSMUST00000084027.13|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000178276.8|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1	ENSMUST00000179592.8|Fgfr1|ENSMUSG00000031565.19|fibroblast growth factor receptor 1
mm39_v1_chr7_-_126620378_126620387	0.035128768043781254	UGGUCCC	ENSMUST00000159916.5|Prrt2|ENSMUSG00000045114.11|proline-rich transmembrane protein 2
mm39_v1_chr19_+_4198615_4198664	0.03503271015545175	UGGUCCC	ENSMUST00000123874.8|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B	ENSMUST00000008893.9|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B	ENSMUST00000237125.2|Coro1b|ENSMUSG00000024835.16|coronin, actin binding protein 1B
mm39_v1_chr4_+_128777339_128777403	0.03501395277933846	UGGUCCC	ENSMUST00000035667.9|Trim62|ENSMUSG00000041000.9|tripartite motif-containing 62
mm39_v1_chr5_-_138153956_138154006	0.03492332850732394	UGGUCCC	ENSMUST00000132318.2|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113	ENSMUST00000049393.15|Zfp113|ENSMUSG00000037007.18|zinc finger protein 113
mm39_v1_chr2_+_156681927_156681952	0.03444168971752057	UGGUCCC	ENSMUST00000081335.13|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr1_-_63153675_63153826	0.03323175369279488	UGGUCCC	ENSMUST00000097718.9|Ino80d|ENSMUSG00000040865.16|INO80 complex subunit D
mm39_v1_chr16_-_4867703_4867756	0.032894755275533906	UGGUCCC	ENSMUST00000115844.3|Glyr1|ENSMUSG00000022536.15|glyoxylate reductase 1 homolog (Arabidopsis)	ENSMUST00000023189.15|Glyr1|ENSMUSG00000022536.15|glyoxylate reductase 1 homolog (Arabidopsis)
mm39_v1_chrX_-_20928219_20928302	0.032357686622404715	UGGUCCC	ENSMUST00000040628.6|Zfp182|ENSMUSG00000054737.12|zinc finger protein 182	ENSMUST00000115333.9|Zfp182|ENSMUSG00000054737.12|zinc finger protein 182	ENSMUST00000115334.8|Zfp182|ENSMUSG00000054737.12|zinc finger protein 182
mm39_v1_chr5_+_53713137_53713176	0.030226303970269496	UGGUCCC	ENSMUST00000087360.9|Rbpj|ENSMUSG00000039191.13|recombination signal binding protein for immunoglobulin kappa J region
mm39_v1_chr1_-_64160557_64160650	0.029439183325482246	UGGUCCC	ENSMUST00000055001.10|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)	ENSMUST00000114086.8|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr1_+_89382491_89382643	0.028606731265973816	UGGUCCC	ENSMUST00000027521.15|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	ENSMUST00000190096.7|Agap1|ENSMUSG00000055013.17|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm39_v1_chr1_-_13660027_13660134	0.028552000484491028	UGGUCCC	ENSMUST00000027068.11|Tram1|ENSMUSG00000025935.11|translocating chain-associating membrane protein 1
mm39_v1_chr1_-_163141230_163141246	0.02746244373606574	UGGUCCC	ENSMUST00000174397.3|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1	ENSMUST00000075805.13|Prrx1|ENSMUSG00000026586.17|paired related homeobox 1
mm39_v1_chr17_+_24570991_24571002	0.026999353203162504	UGGUCCC	ENSMUST00000039013.15|Abca3|ENSMUSG00000024130.17|ATP-binding cassette, sub-family A (ABC1), member 3
mm39_v1_chr2_-_72810782_72810811	0.02593981327387937	UGGUCCC	ENSMUST00000102689.10|Sp3|ENSMUSG00000027109.17|trans-acting transcription factor 3
mm39_v1_chr15_-_79688910_79688967	0.02533848118156348	UGGUCCC	ENSMUST00000175858.10|Nptxr|ENSMUSG00000022421.21|neuronal pentraxin receptor	ENSMUST00000023057.10|Nptxr|ENSMUSG00000022421.21|neuronal pentraxin receptor
mm39_v1_chr11_-_85030761_85030864	0.025016662867138127	UGGUCCC	ENSMUST00000108075.9|Usp32|ENSMUSG00000000804.15|ubiquitin specific peptidase 32
mm39_v1_chr9_+_86625694_86625708	0.02396066267078696	UGGUCCC	ENSMUST00000179574.2|Prss35|ENSMUSG00000033491.14|protease, serine 35	ENSMUST00000036426.13|Prss35|ENSMUSG00000033491.14|protease, serine 35
mm39_v1_chr16_-_4607848_4607862	0.02354798136806817	UGGUCCC	ENSMUST00000004173.12|Cdip1|ENSMUSG00000004071.14|cell death inducing Trp53 target 1
mm39_v1_chr10_-_116984386_116984452	0.02352784921711816	UGGUCCC	ENSMUST00000020381.5|Frs2|ENSMUSG00000020170.5|fibroblast growth factor receptor substrate 2
mm39_v1_chr5_+_30745447_30745514	0.023107533239166127	UGGUCCC	ENSMUST00000066295.5|Kcnk3|ENSMUSG00000049265.9|potassium channel, subfamily K, member 3
mm39_v1_chr11_-_5015275_5015328	0.02260907823226176	UGGUCCC	ENSMUST00000109895.2|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1	ENSMUST00000152257.2|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1	ENSMUST00000037146.10|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1	ENSMUST00000056649.13|Gas2l1|ENSMUSG00000034201.14|growth arrest-specific 2 like 1
mm39_v1_chr1_-_22845124_22845203	0.022294621348793123	UGGUCCC	ENSMUST00000115273.10|Rims1|ENSMUSG00000041670.20|regulating synaptic membrane exocytosis 1
mm39_v1_chr15_+_99599978_99600010	0.02195335793362313	UGGUCCC	ENSMUST00000023759.6|Smarcd1|ENSMUSG00000023018.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm39_v1_chr14_-_24295988_24295988	0.02166408242886349	UGGUCCC	ENSMUST00000073687.13|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5	ENSMUST00000090398.11|Dlg5|ENSMUSG00000021782.15|discs large MAGUK scaffold protein 5
mm39_v1_chr3_+_95566082_95566168	0.021511786414413803	UGGUCCC	ENSMUST00000037947.15|Mcl1|ENSMUSG00000038612.17|myeloid cell leukemia sequence 1	ENSMUST00000178686.2|Mcl1|ENSMUSG00000038612.17|myeloid cell leukemia sequence 1
mm39_v1_chr11_-_21951605_21951631	0.0213467395420732	UGGUCCC	ENSMUST00000006071.14|Otx1|ENSMUSG00000005917.16|orthodenticle homeobox 1
mm39_v1_chr4_-_116024788_116024804	0.02068427117947292	UGGUCCC	ENSMUST00000030465.10|Tspan1|ENSMUSG00000028699.10|tetraspanin 1	ENSMUST00000143426.2|Tspan1|ENSMUSG00000028699.10|tetraspanin 1
mm39_v1_chr2_+_158251761_158251783	0.019576068329428646	UGGUCCC	ENSMUST00000109486.9|Ralgapb|ENSMUSG00000027652.16|Ral GTPase activating protein, beta subunit (non-catalytic)	ENSMUST00000046274.12|Ralgapb|ENSMUSG00000027652.16|Ral GTPase activating protein, beta subunit (non-catalytic)
mm39_v1_chr6_+_134958681_134958681	0.019209032490010693	UGGUCCC	ENSMUST00000167323.3|Apold1|ENSMUSG00000090698.3|apolipoprotein L domain containing 1
mm39_v1_chr4_-_126096551_126096554	0.01888947005255084	UGGUCCC	ENSMUST00000080919.12|Thrap3|ENSMUSG00000043962.17|thyroid hormone receptor associated protein 3
mm39_v1_chr16_+_17615146_17615189	0.017682911889336184	UGGUCCC	ENSMUST00000012161.5|Scarf2|ENSMUSG00000012017.5|scavenger receptor class F, member 2	ENSMUST00000232577.2|Scarf2|ENSMUSG00000012017.5|scavenger receptor class F, member 2
mm39_v1_chrX_-_151151680_151151737	0.01764712297835446	UGGUCCC	ENSMUST00000070316.12|Gpr173|ENSMUSG00000056679.14|G-protein coupled receptor 173
mm39_v1_chr12_-_75782502_75782511	0.017078404402597523	UGGUCCC	ENSMUST00000021450.6|Sgpp1|ENSMUSG00000021054.7|sphingosine-1-phosphate phosphatase 1
mm39_v1_chr6_+_22875494_22875511	0.016855748362341813	UGGUCCC	ENSMUST00000090568.7|Ptprz1|ENSMUSG00000068748.8|protein tyrosine phosphatase, receptor type Z, polypeptide 1
mm39_v1_chr11_-_75345482_75345549	0.016795780381657504	UGGUCCC	ENSMUST00000173320.8|Wdr81|ENSMUSG00000045374.19|WD repeat domain 81
mm39_v1_chr14_-_52434863_52434923	0.016483610441147524	UGGUCCC	ENSMUST00000046709.9|Supt16|ENSMUSG00000035726.9|SPT16, facilitates chromatin remodeling subunit
mm39_v1_chr2_-_130681978_130682070	0.016169731294656348	UGGUCCC	ENSMUST00000044766.15|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000138990.2|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000120316.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene	ENSMUST00000110243.8|4930402H24Rik|ENSMUSG00000027309.19|RIKEN cDNA 4930402H24 gene
mm39_v1_chr6_-_39702381_39702413	0.015876434033826096	UGGUCCC	ENSMUST00000002487.15|Braf|ENSMUSG00000002413.16|Braf transforming gene
mm39_v1_chr6_-_59001455_59001534	0.01531884195524392	UGGUCCC	ENSMUST00000089860.12|Fam13a|ENSMUSG00000037709.14|family with sequence similarity 13, member A
mm39_v1_chr19_-_60569323_60569468	0.015193375475016068	UGGUCCC	ENSMUST00000111460.5|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000166712.9|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1	ENSMUST00000081790.15|Cacul1|ENSMUSG00000033417.17|CDK2 associated, cullin domain 1
mm39_v1_chrX_-_164110372_164110416	0.01389909399141252	UGGUCCC	ENSMUST00000058787.9|Glra2|ENSMUSG00000018589.9|glycine receptor, alpha 2 subunit
mm39_v1_chr10_-_78427721_78427798	0.013351500553799531	UGGUCCC	ENSMUST00000040580.7|Syde1|ENSMUSG00000032714.7|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
mm39_v1_chr3_-_84212069_84212116	0.013114514623272311	UGGUCCC	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr5_-_124465946_124466035	0.012566439261893533	UGGUCCC	ENSMUST00000031344.13|Mphosph9|ENSMUSG00000038126.18|M-phase phosphoprotein 9
mm39_v1_chr2_+_90770742_90770888	0.012092872292858246	UGGUCCC	ENSMUST00000005643.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000111451.10|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000177642.8|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068726.13|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1	ENSMUST00000068747.14|Celf1|ENSMUSG00000005506.17|CUGBP, Elav-like family member 1
mm39_v1_chr6_-_136150076_136150146	0.010516363391187073	UGGUCCC	ENSMUST00000053880.13|Grin2b|ENSMUSG00000030209.15|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm39_v1_chr13_-_46881388_46881482	0.01019252345680471	UGGUCCC	ENSMUST00000021803.10|Nup153|ENSMUSG00000021374.11|nucleoporin 153
mm39_v1_chr7_-_18883113_18883216	0.009578401324215195	UGGUCCC	ENSMUST00000032566.3|Qpctl|ENSMUSG00000030407.3|glutaminyl-peptide cyclotransferase-like
mm39_v1_chr10_-_83484576_83484602	0.009433521569718502	UGGUCCC	ENSMUST00000020500.14|Appl2|ENSMUSG00000020263.15|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
mm39_v1_chr19_-_46136765_46136825	0.008962470687778933	UGGUCCC	ENSMUST00000026259.16|Pitx3|ENSMUSG00000025229.16|paired-like homeodomain transcription factor 3
mm39_v1_chr4_+_65042411_65042411	0.008683874584603145	UGGUCCC	ENSMUST00000084501.4|Pappa|ENSMUSG00000028370.8|pregnancy-associated plasma protein A
mm39_v1_chr13_-_113755082_113755101	0.008602122218840904	UGGUCCC	ENSMUST00000109241.5|Snx18|ENSMUSG00000042364.12|sorting nexin 18
mm39_v1_chr7_-_105049197_105049261	0.008311461180688208	UGGUCCC	ENSMUST00000048079.14|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000118726.8|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000074686.10|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000122327.7|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2	ENSMUST00000179474.9|Fam160a2|ENSMUSG00000044465.20|family with sequence similarity 160, member A2
mm39_v1_chr1_+_159871943_159872024	0.007055312193845639	UGGUCCC	ENSMUST00000163892.8|4930523C07Rik|ENSMUSG00000090394.9|RIKEN cDNA 4930523C07 gene
mm39_v1_chr15_+_7840327_7840327	0.006246641417951854	UGGUCCC	ENSMUST00000022744.5|Gdnf|ENSMUSG00000022144.5|glial cell line derived neurotrophic factor
mm39_v1_chr11_+_101066867_101066867	0.006135254961644852	UGGUCCC	ENSMUST00000103109.4|Cntnap1|ENSMUSG00000017167.7|contactin associated protein-like 1
mm39_v1_chr11_-_54140462_54140493	0.005952606217434364	UGGUCCC	ENSMUST00000019060.6|Csf2|ENSMUSG00000018916.6|colony stimulating factor 2 (granulocyte-macrophage)
mm39_v1_chr11_-_119438569_119438585	0.0057911774056157534	UGGUCCC	ENSMUST00000026670.5|Nptx1|ENSMUSG00000025582.5|neuronal pentraxin 1
mm39_v1_chr10_+_42637479_42637492	0.005668857341337255	UGGUCCC	ENSMUST00000019937.5|Sec63|ENSMUSG00000019802.14|SEC63-like (S. cerevisiae)
mm39_v1_chr3_-_89245297_89245374	0.0053531688170610995	UGGUCCC	ENSMUST00000029674.8|Efna4|ENSMUSG00000028040.8|ephrin A4
mm39_v1_chr11_-_78277384_78277433	0.005104262819702875	UGGUCCC	ENSMUST00000108294.2|Foxn1|ENSMUSG00000002057.5|forkhead box N1
mm39_v1_chr1_+_91729175_91729210	0.004774121270675236	UGGUCCC	ENSMUST00000007949.4|Twist2|ENSMUSG00000007805.5|twist basic helix-loop-helix transcription factor 2	ENSMUST00000186075.2|Twist2|ENSMUSG00000007805.5|twist basic helix-loop-helix transcription factor 2
mm39_v1_chr4_+_11485945_11485975	0.00439966216734376	UGGUCCC	ENSMUST00000055372.14|Virma|ENSMUSG00000040720.16|vir like m6A methyltransferase associated	ENSMUST00000059914.13|Virma|ENSMUSG00000040720.16|vir like m6A methyltransferase associated
mm39_v1_chr4_+_59805829_59805914	0.004277361749378445	UGGUCCC	ENSMUST00000030080.7|Snx30|ENSMUSG00000028385.15|sorting nexin family member 30
mm39_v1_chr11_+_51989508_51989640	0.004194320137666698	UGGUCCC	ENSMUST00000020608.3|Ppp2ca|ENSMUSG00000020349.5|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm39_v1_chr9_+_75922137_75922337	0.003976625113575996	UGGUCCC	ENSMUST00000008052.13|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	ENSMUST00000183425.8|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	ENSMUST00000183979.8|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	ENSMUST00000117981.3|Hmgcll1|ENSMUSG00000007908.15|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm39_v1_chr2_+_119068012_119068035	0.0037060627144942866	UGGUCCC	ENSMUST00000110817.3|Spint1|ENSMUSG00000027315.14|serine protease inhibitor, Kunitz type 1
mm39_v1_chr4_-_139560831_139560846	0.0034964082158988117	UGGUCCC	ENSMUST00000030508.14|Pax7|ENSMUSG00000028736.14|paired box 7
mm39_v1_chr7_+_15864265_15864290	0.003397190866032	UGGUCCC	ENSMUST00000168693.3|Slc8a2|ENSMUSG00000030376.9|solute carrier family 8 (sodium/calcium exchanger), member 2
mm39_v1_chr8_+_96078886_96078957	0.0033630002045284876	UGGUCCC	ENSMUST00000034243.7|Mmp15|ENSMUSG00000031790.9|matrix metallopeptidase 15
mm39_v1_chr5_-_116729870_116729889	0.003304861540062322	UGGUCCC	ENSMUST00000076124.7|Srrm4|ENSMUSG00000063919.12|serine/arginine repetitive matrix 4
mm39_v1_chr17_-_25789652_25789670	0.0031979713606249366	UGGUCCC	ENSMUST00000025003.10|Sox8|ENSMUSG00000024176.11|SRY (sex determining region Y)-box 8	ENSMUST00000173447.2|Sox8|ENSMUSG00000024176.11|SRY (sex determining region Y)-box 8
mm39_v1_chr1_+_135252508_135252558	0.003031729910951602	UGGUCCC	ENSMUST00000059352.3|Lmod1|ENSMUSG00000048096.8|leiomodin 1 (smooth muscle)
mm39_v1_chr11_+_75570085_75570167	0.0029082704769036495	UGGUCCC	ENSMUST00000017920.14|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000108426.8|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000108425.8|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog	ENSMUST00000093115.4|Crk|ENSMUSG00000017776.16|v-crk avian sarcoma virus CT10 oncogene homolog
mm39_v1_chr6_+_86172196_86172224	0.0025917089037962985	UGGUCCC	ENSMUST00000032066.13|Tgfa|ENSMUSG00000029999.15|transforming growth factor alpha
mm39_v1_chr3_-_158267771_158267939	0.0020951895332841893	UGGUCCC	ENSMUST00000199890.5|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000238317.3|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000200137.5|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7	ENSMUST00000106044.6|Lrrc7|ENSMUSG00000028176.14|leucine rich repeat containing 7
mm39_v1_chr9_-_20726344_20726365	0.002042223575426378	UGGUCCC	ENSMUST00000004201.8|Col5a3|ENSMUSG00000004098.8|collagen, type V, alpha 3
mm39_v1_chr5_+_32768515_32768589	0.0018903658732786304	UGGUCCC	ENSMUST00000202543.4|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase	ENSMUST00000072311.13|Yes1|ENSMUSG00000014932.16|YES proto-oncogene 1, Src family tyrosine kinase
mm39_v1_chr19_+_44977512_44977555	0.0017592894843444006	UGGUCCC	ENSMUST00000026225.15|Sema4g|ENSMUSG00000025207.17|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm39_v1_chr6_-_72212547_72212569	0.0016025905445422347	UGGUCCC	ENSMUST00000042646.8|Atoh8|ENSMUSG00000037621.9|atonal bHLH transcription factor 8
mm39_v1_chr19_-_12773472_12773510	0.0012397987686305777	UGGUCCC	ENSMUST00000038627.9|Zfp91|ENSMUSG00000024695.17|zinc finger protein 91
mm39_v1_chr3_-_89177796_89177877	0.0007896256137094022	UGGUCCC	ENSMUST00000107460.8|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1	ENSMUST00000029565.11|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1	ENSMUST00000130230.2|Slc50a1|ENSMUSG00000027953.14|solute carrier family 50 (sugar transporter), member 1
mm39_v1_chr9_+_98837325_98837344	0.0006242047717263754	UGGUCCC	ENSMUST00000051312.5|Foxl2|ENSMUSG00000050397.5|forkhead box L2
mm39_v1_chr5_-_103247920_103247954	0.0005769711378540342	UGGUCCC	ENSMUST00000112848.8|Mapk10|ENSMUSG00000046709.19|mitogen-activated protein kinase 10
mm39_v1_chr12_+_98713194_98713305	1.5879717941505652e-05	UGGUCCC	ENSMUST00000110104.10|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14	ENSMUST00000057000.17|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14	ENSMUST00000110105.10|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14	ENSMUST00000223083.2|Zc3h14|ENSMUSG00000021012.17|zinc finger CCCH type containing 14
